Clone Name | bart26c02 |
---|---|
Clone Library Name | barley_pub |
>US29_HCMVA (P09705) Hypothetical protein HHRF4| Length = 462 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = -1 Query: 340 SSVGTTRSKCLDSGPTCAAHCHVGSGPNPRISTATGRRPRCLSSPS 203 S +G T S+ TC AH G P P STAT + L++P+ Sbjct: 381 SDIGDTASET-----TCVAHATYGEPPEPARSTATVQECTVLTAPN 421
>CAH5B_MOUSE (Q9QZA0) Carbonic anhydrase 5B, mitochondrial precursor (EC| 4.2.1.1) (Carbonic anhydrase VB) (Carbonate dehydratase VB) (CA-VB) Length = 317 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +3 Query: 75 SLLNAVFRRAFTSAGLRPSSVAVDAETTLHFWAHXXXXXXXXXDGDDK 218 S +N +R + GL+P +++ D T LH W + D DK Sbjct: 65 SPINIRWRDSVYDPGLKPLTISYDPATCLHIWNNGYSFLVEFEDSTDK 112
>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1006 Score = 29.3 bits (64), Expect = 7.4 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = -1 Query: 376 RSGARVVDAPKK----SSVGTTRSKCLDSGPTCAAHCHVGSGPNPRISTATGRRPRCLSS 209 ++ AR DAP +S G + SGPT + C + + P+PR+S + RP L S Sbjct: 232 QTSARKRDAPAPRPLPASEGHLQPPAQTSGPTGSPPC-IQTSPDPRLSPSFRARPEALHS 290
>CAH5B_HUMAN (Q9Y2D0) Carbonic anhydrase 5B, mitochondrial precursor (EC| 4.2.1.1) (Carbonic anhydrase VB) (Carbonate dehydratase VB) (CA-VB) Length = 317 Score = 29.3 bits (64), Expect = 7.4 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +3 Query: 75 SLLNAVFRRAFTSAGLRPSSVAVDAETTLHFWAHXXXXXXXXXDGDDK 218 S +N +R + GL+P +++ D T LH W + D DK Sbjct: 65 SPINIRWRDSVYDPGLKPLTISYDPATCLHVWNNGYSFLVEFEDSTDK 112
>CAH5B_RAT (Q66HG6) Carbonic anhydrase 5B, mitochondrial precursor (EC| 4.2.1.1) (Carbonic anhydrase VB) (Carbonate dehydratase VB) (CA-VB) Length = 317 Score = 28.9 bits (63), Expect = 9.6 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +3 Query: 75 SLLNAVFRRAFTSAGLRPSSVAVDAETTLHFWAHXXXXXXXXXDGDDK 218 S +N +R + GL+P +++ D T LH W + D DK Sbjct: 65 SPINIRWRDSVYDPGLKPLTISYDPATCLHIWNNGYSFLVEFEDTTDK 112 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,549,436 Number of Sequences: 219361 Number of extensions: 526796 Number of successful extensions: 2095 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1994 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2093 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)