Clone Name | bart26c01 |
---|---|
Clone Library Name | barley_pub |
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 617 bits (311), Expect = e-173 Identities = 440/483 (91%) Strand = Plus / Plus Query: 93 atggcaggcaacggagccatcgtcgagaaggacccgctcaactggggcgcggcggcggcc 152 ||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 1 atggcgggcaacggggccatcgtggaggaggacccgctcaactggggcgcggcggcggcg 60 Query: 153 gagctcaccggcagccacctcgacgaggtgaagcggatggtggcgcagttccgcgagcca 212 ||||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 61 gagctggccgggagccacctggacgaggtgaagcgcatggtggcgcagttccgcgagccg 120 Query: 213 gtggtgaagatcgagggcgccagcctccgcgtcggccaggtggcggccgtggcccaggcc 272 |||| |||||| ||||||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 121 ctggtcaagatccagggcgccaccctccgcgtcggccaggtggccgccgtcgcccaggcc 180 Query: 273 aaggacgcgtcgggcgtctccgtggagctcgacgaggaggcgcggccccgcgtcaaggcc 332 ||||||||||| |||||| |||| ||||||||||||||||| || ||||||||||||||| Sbjct: 181 aaggacgcgtccggcgtcgccgtcgagctcgacgaggaggcccgcccccgcgtcaaggcc 240 Query: 333 agcagcgagtggatcctcagctgcctcgccggcgggggcgacatctacggcgtcaccacc 392 ||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||||| Sbjct: 241 agcagcgagtggatcctcaactgcatcgcccacggcggcgacatctacggcgtcaccacc 300 Query: 393 ggcttcggcggcacctcccaccgccgcaccaaggacgggcccgccctccaggtggagctc 452 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 301 ggcttcggcggcacctcccaccgccgcaccaaggacgggcccgcgctccaggtcgagctc 360 Query: 453 ctcaggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggcg 512 ||||||||||| ||||| |||||||||||| ||||| ||| || ||| |||||||| || Sbjct: 361 ctcaggcatctcaacgccggaatcttcggcaccggcagcgacgggcacacgctgccgtcg 420 Query: 513 gaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggc 572 ||| | |||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gagacgacccgcgcggcgatgctcgtgcgcatcaacaccctcctccagggctactccggc 480 Query: 573 atc 575 ||| Sbjct: 481 atc 483
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 593 bits (299), Expect = e-166 Identities = 416/455 (91%) Strand = Plus / Plus Query: 121 aggacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgagg 180 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 115 aggacccgctcaactggggcgcggcggcggccgagatggccggcagccacctcgacgagg 174 Query: 181 tgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcctcc 240 ||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||| Sbjct: 175 tgaagcgcatggtggcgcagttccgcgagccgctggtcaagatccagggcgccaccctcc 234 Query: 241 gcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcgggcgtctccgtggagc 300 |||||||||||||||| ||||| ||||||||||||||||| | |||||| |||| |||| Sbjct: 235 gcgtcggccaggtggccgccgtcgcccaggccaaggacgccgccggcgtcgccgtcgagc 294 Query: 301 tcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtggatcctcagctgcctcg 360 ||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 295 tcgacgaggaggcccgcccccgcgtcaaggccagcagcgagtggatcctcaactgcatcg 354 Query: 361 ccggcgggggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 cccacggcggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 414 Query: 421 ccaaggacgggcccgccctccaggtggagctcctcaggcatctgaacgctggaatcttcg 480 |||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 415 ccaaggacggccccgccctccaagtcgagctcctcaggcatctcaacgccggaatcttcg 474 Query: 481 gccccggcgccgatggccactcgctgccggcggaggtgtcccgtgcggccatgctcgtgc 540 || | ||| ||||||||||| |||||||| ||||| | || |||||||||||||||| Sbjct: 475 gcactggctccgatggccacacgctgccgtcggagacggtgcgggcggccatgctcgtgc 534 Query: 541 gcatcaacaccctcctccagggctactccggcatc 575 ||||||||||||||||||||||||||||||||||| Sbjct: 535 gcatcaacaccctcctccagggctactccggcatc 569
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 593 bits (299), Expect = e-166 Identities = 416/455 (91%) Strand = Plus / Plus Query: 121 aggacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgagg 180 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 117 aggacccgctcaactggggcgcggcggcggccgagatggccggcagccacctcgacgagg 176 Query: 181 tgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcctcc 240 ||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||| Sbjct: 177 tgaagcgcatggtggcgcagttccgcgagccgctggtcaagatccagggcgccaccctcc 236 Query: 241 gcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcgggcgtctccgtggagc 300 |||||||||||||||| ||||| ||||||||||||||||| | |||||| |||| |||| Sbjct: 237 gcgtcggccaggtggccgccgtcgcccaggccaaggacgccgccggcgtcgccgtcgagc 296 Query: 301 tcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtggatcctcagctgcctcg 360 ||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 297 tcgacgaggaggcccgcccccgcgtcaaggccagcagcgagtggatcctcaactgcatcg 356 Query: 361 ccggcgggggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 cccacggcggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 416 Query: 421 ccaaggacgggcccgccctccaggtggagctcctcaggcatctgaacgctggaatcttcg 480 |||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 417 ccaaggacggccccgccctccaagtcgagctcctcaggcatctcaacgccggaatcttcg 476 Query: 481 gccccggcgccgatggccactcgctgccggcggaggtgtcccgtgcggccatgctcgtgc 540 || | ||| ||||||||||| |||||||| ||||| | || |||||||||||||||| Sbjct: 477 gcactggctccgatggccacacgctgccgtcggagacggtgcgggcggccatgctcgtgc 536 Query: 541 gcatcaacaccctcctccagggctactccggcatc 575 ||||||||||||||||||||||||||||||||||| Sbjct: 537 gcatcaacaccctcctccagggctactccggcatc 571
>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds Length = 2488 Score = 539 bits (272), Expect = e-150 Identities = 431/484 (89%) Strand = Plus / Plus Query: 92 aatggcaggcaacggagccatcgtcgagaaggacccgctcaactggggcgcggcggcggc 151 |||||| |||||||| |||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 113 aatggcgggcaacggcgccatcgtggagagcgacccgctgaactggggcgcggcggcggc 172 Query: 152 cgagctcaccggcagccacctcgacgaggtgaagcggatggtggcgcagttccgcgagcc 211 ||||| |||| |||||||| |||||||||||||| |||||||||||| ||| |||| Sbjct: 173 ggagctggccgggagccacctggacgaggtgaagcgcatggtggcgcaggcccggcagcc 232 Query: 212 agtggtgaagatcgagggcgccagcctccgcgtcggccaggtggcggccgtggcccaggc 271 ||||| |||||||||||| ||| ||||||||||||||||||||| ||||| ||| || Sbjct: 233 cgtggtcaagatcgagggctccaccctccgcgtcggccaggtggccgccgtcgcctccgc 292 Query: 272 caaggacgcgtcgggcgtctccgtggagctcgacgaggaggcgcggccccgcgtcaaggc 331 |||||||||||| |||||| |||| ||||||||||||||||| || |||||||||||||| Sbjct: 293 caaggacgcgtccggcgtcgccgtcgagctcgacgaggaggcccgcccccgcgtcaaggc 352 Query: 332 cagcagcgagtggatcctcagctgcctcgccggcgggggcgacatctacggcgtcaccac 391 ||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||| Sbjct: 353 cagcagcgagtggatcctcgactgcatcgcccacggcggcgacatctacggcgtcaccac 412 Query: 392 cggcttcggcggcacctcccaccgccgcaccaaggacgggcccgccctccaggtggagct 451 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 413 cggcttcggcggcacctcccaccgccgcaccaaggacgggcccgcgctccaggtcgagct 472 Query: 452 cctcaggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggc 511 ||||||||||| ||||| |||||||||||| ||||| ||| || ||| |||||||| | Sbjct: 473 gctcaggcatctcaacgccggaatcttcggcaccggcagcgacgggcacacgctgccgtc 532 Query: 512 ggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 |||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 533 ggaggtcacccgcgcggcgatgctggtgcgcatcaacaccctcctccagggctactccgg 592 Query: 572 catc 575 |||| Sbjct: 593 catc 596
>gb|AY103647.1| Zea mays PCO142084 mRNA sequence Length = 2598 Score = 531 bits (268), Expect = e-148 Identities = 430/484 (88%) Strand = Plus / Plus Query: 92 aatggcaggcaacggagccatcgtcgagaaggacccgctcaactggggcgcggcggcggc 151 |||||| |||||||| |||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 109 aatggcgggcaacggcgccatcgtggagagcgacccgctgaactggggcgcggcggcggc 168 Query: 152 cgagctcaccggcagccacctcgacgaggtgaagcggatggtggcgcagttccgcgagcc 211 ||||| |||| |||||||| |||||||||||||| |||||||||||| ||| |||| Sbjct: 169 ggagctggccgggagccacctggacgaggtgaagcgcatggtggcgcaggcccggcagcc 228 Query: 212 agtggtgaagatcgagggcgccagcctccgcgtcggccaggtggcggccgtggcccaggc 271 ||||| ||||||||||| ||| ||||||||||||||||||||| ||||| ||| || Sbjct: 229 cgtggtcaagatcgagggttccaccctccgcgtcggccaggtggccgccgtcgcctccgc 288 Query: 272 caaggacgcgtcgggcgtctccgtggagctcgacgaggaggcgcggccccgcgtcaaggc 331 |||||||||||| |||||| |||| ||||||||||||||||| || |||||||||||||| Sbjct: 289 caaggacgcgtccggcgtcgccgtcgagctcgacgaggaggcccgcccccgcgtcaaggc 348 Query: 332 cagcagcgagtggatcctcagctgcctcgccggcgggggcgacatctacggcgtcaccac 391 ||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||| Sbjct: 349 cagcagcgagtggatcctcgactgcatcgcccacggcggcgacatctacggcgtcaccac 408 Query: 392 cggcttcggcggcacctcccaccgccgcaccaaggacgggcccgccctccaggtggagct 451 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 409 cggcttcggcggcacctcccaccgccgcaccaaggacgggcccgcgctccaggtcgagct 468 Query: 452 cctcaggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggc 511 ||||||||||| ||||| |||||||||||| ||||| ||| || ||| |||||||| | Sbjct: 469 gctcaggcatctcaacgccggaatcttcggcaccggcagcgacgggcacacgctgccgtc 528 Query: 512 ggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 |||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 529 ggaggtcacccgcgcggcgatgctggtgcgcatcaacaccctcctccagggctactccgg 588 Query: 572 catc 575 |||| Sbjct: 589 catc 592
>gb|AF005089.1|AF005089 Triticum aestivum phenylalanine ammonia lyase (War7.2) mRNA, partial cds Length = 276 Score = 482 bits (243), Expect = e-133 Identities = 271/278 (97%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 206 cgagccagtggtgaagatcgagggcgccagcctccgcgtcggccaggtggcggccgtggc 265 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2 cgagcccgtggtgaagatcgagggcgccagc-tccgcgtcggccaggtggcggccgtggc 60 Query: 266 ccaggccaaggacgcgtcgggcgtctccgtggagctcgacgaggaggcgcggccccgcgt 325 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccaggccaaggacgcgtcgggcatctccgtggagctcgacgaggaggcgcggccccgcgt 120 Query: 326 caaggccagcagcgagtggatcctcagctgcctcgccggcgggggcgacatctacggcgt 385 |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 121 caaggccagcagcgagtggatcctcagctgcctcgccggc--gcgcgacatctacggcgt 178 Query: 386 caccaccggcttcggcggcacctcccaccgccgcaccaaggacgggcccgccctccaggt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 caccaccggcttcggcggcacctcccaccgccgcaccaaggacgggcccgccctccaggt 238 Query: 446 ggagctcctcaggcatctgaacgctggaatcttcggcc 483 ||||||||||||||||||||||||||||||||| |||| Sbjct: 239 ggagctcctcaggcatctgaacgctggaatctttggcc 276
>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 4412 Score = 464 bits (234), Expect = e-127 Identities = 312/338 (92%) Strand = Plus / Plus Query: 121 aggacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgagg 180 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 682 aggacccgctcaactggggcgcggcggcggccgagatggccggcagccacctcgacgagg 741 Query: 181 tgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcctcc 240 ||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||| Sbjct: 742 tgaagcgcatggtggcgcagttccgcgagccgctggtcaagatccagggcgccaccctcc 801 Query: 241 gcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcgggcgtctccgtggagc 300 |||||||||||||||| ||||| ||||||||||||||||| || ||||| |||| |||| Sbjct: 802 gcgtcggccaggtggccgccgtcgcccaggccaaggacgccgcgcgcgtcgccgtcgagc 861 Query: 301 tcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtggatcctcagctgcctcg 360 ||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 862 tcgacgaggaggcccgcccccgcgtcaaggccagcagcgagtggatcctcacctgcatcg 921 Query: 361 ccggcgggggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 922 cccacggcggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 981 Query: 421 ccaaggacgggcccgccctccaggtggagctcctcagg 458 |||||||||| ||||||||||| || |||||||||||| Sbjct: 982 ccaaggacggccccgccctccaagtcgagctcctcagg 1019 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Plus Query: 455 caggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggcgga 514 ||||||||| ||||| |||||||||||| | ||| ||||||||||| |||||||| |||| Sbjct: 2326 caggcatctcaacgccggaatcttcggcactggctccgatggccacacgctgccgtcgga 2385 Query: 515 ggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 | | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2386 gacggtgcgggcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 2445 Query: 575 c 575 | Sbjct: 2446 c 2446 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1 aagaagagcacatcaccatctcctccggctctt 33 ||||||||| ||||||| ||||||||||||||| Sbjct: 569 aagaagagctcatcaccttctcctccggctctt 601
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 464 bits (234), Expect = e-127 Identities = 312/338 (92%) Strand = Plus / Minus Query: 121 aggacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgagg 180 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 24995667 aggacccgctcaactggggcgcggcggcggccgagatggccggcagccacctcgacgagg 24995608 Query: 181 tgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcctcc 240 ||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||| Sbjct: 24995607 tgaagcgcatggtggcgcagttccgcgagccgctggtcaagatccagggcgccaccctcc 24995548 Query: 241 gcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcgggcgtctccgtggagc 300 |||||||||||||||| ||||| ||||||||||||||||| | |||||| |||| |||| Sbjct: 24995547 gcgtcggccaggtggccgccgtcgcccaggccaaggacgccgccggcgtcgccgtcgagc 24995488 Query: 301 tcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtggatcctcagctgcctcg 360 ||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 24995487 tcgacgaggaggcccgcccccgcgtcaaggccagcagcgagtggatcctcaactgcatcg 24995428 Query: 361 ccggcgggggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24995427 cccacggcggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 24995368 Query: 421 ccaaggacgggcccgccctccaggtggagctcctcagg 458 |||||||||| ||||||||||| || |||||||||||| Sbjct: 24995367 ccaaggacggccccgccctccaagtcgagctcctcagg 24995330 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 455 caggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggcgga 514 ||||||||| ||||| |||||||||||| | ||| ||||||||||| |||||||| |||| Sbjct: 24993996 caggcatctcaacgccggaatcttcggcactggctccgatggccacacgctgccgtcgga 24993937 Query: 515 ggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 | | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24993936 gacggtgcgggcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 24993877 Query: 575 c 575 | Sbjct: 24993876 c 24993876 Score = 103 bits (52), Expect = 6e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 143 ggcggcggccgagctcaccggcagccacctcgacgaggtgaagcggatggtggcgcagtt 202 |||||||| |||||| | || ||||||||||||||||||||||||||||||| | | || Sbjct: 25007632 ggcggcggacgagctggcggggagccacctcgacgaggtgaagcggatggtggaggactt 25007573 Query: 203 ccgcgagccagtggtgaagatcgagggcgccagcct 238 |||| |||| ||||||||||||||||||||||||| Sbjct: 25007572 ccgccagccgctggtgaagatcgagggcgccagcct 25007537 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 25007410 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccgccgcaccaagga 25007354 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 476 cttcggccccggcgccgatggccactcgctgccggcggaggtgtcccgtgcggccatgct 535 ||||||| ||||| |||| |||||| ||||||||||||| | | || ||||| ||||| Sbjct: 25005803 cttcggcaccggcaccgacggccacgttctgccggcggaggcgacgcgcgcggcgatgct 25005744 Query: 536 cgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||| ||||||||||||||||||||||| |||||||||||| Sbjct: 25005743 cgtccgcatcaacaccctcctccagggttactccggcatc 25005704 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||| ||||||||||| ||| |||| |||| |||| |||||| Sbjct: 25027367 agccacctcgacgaggtgaagaggatggtggcggagtaccgccagcctctggtcaagatc 25027308 Query: 225 gagggcgccagcct 238 |||||||| ||||| Sbjct: 25027307 gagggcgctagcct 25027294 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||||| |||||||| ||| |||| |||| |||| |||||| Sbjct: 25013653 agccacctcgacgaggtgaagcgcatggtggccgagtaccgccagccgctggtaaagatc 25013594 Query: 225 gagggcgccagcct 238 |||||||||||||| Sbjct: 25013593 gagggcgccagcct 25013580 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 505 tgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggct 564 |||||||||||| |||| ||||| |||||||| ||||||||||| ||||||||||| | Sbjct: 25026917 tgccggcggaggcaacccgcgcggcaatgctcgtccgcatcaacacactcctccagggat 25026858 Query: 565 actccggcatc 575 ||||||||||| Sbjct: 25026857 actccggcatc 25026847 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 25013302 gcggcgatgctcgtccgcatcaacactctcctccagggctactcaggcatc 25013252 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccac 413 |||| |||||| ||||||||||||||||||| ||| |||||| Sbjct: 25013455 gacagctacggtgtcaccaccggcttcggcgccacgtcccac 25013414 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccac 413 |||| |||||| ||||||||||| ||||||| ||| |||||| Sbjct: 25027169 gacagctacggtgtcaccaccggtttcggcgccacgtcccac 25027128 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 25007461 ccgcgtcaaggccagcagcga 25007441 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 25027220 cgcgtcaaggccagcagcga 25027201 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 25013506 cgcgtcaaggccagcagcga 25013487
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 464 bits (234), Expect = e-127 Identities = 312/338 (92%) Strand = Plus / Minus Query: 121 aggacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgagg 180 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 8655 aggacccgctcaactggggcgcggcggcggccgagatggccggcagccacctcgacgagg 8596 Query: 181 tgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcctcc 240 ||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||| Sbjct: 8595 tgaagcgcatggtggcgcagttccgcgagccgctggtcaagatccagggcgccaccctcc 8536 Query: 241 gcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcgggcgtctccgtggagc 300 |||||||||||||||| ||||| ||||||||||||||||| | |||||| |||| |||| Sbjct: 8535 gcgtcggccaggtggccgccgtcgcccaggccaaggacgccgccggcgtcgccgtcgagc 8476 Query: 301 tcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtggatcctcagctgcctcg 360 ||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 8475 tcgacgaggaggcccgcccccgcgtcaaggccagcagcgagtggatcctcaactgcatcg 8416 Query: 361 ccggcgggggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8415 cccacggcggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 8356 Query: 421 ccaaggacgggcccgccctccaggtggagctcctcagg 458 |||||||||| ||||||||||| || |||||||||||| Sbjct: 8355 ccaaggacggccccgccctccaagtcgagctcctcagg 8318 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 455 caggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggcgga 514 ||||||||| ||||| |||||||||||| | ||| ||||||||||| |||||||| |||| Sbjct: 6984 caggcatctcaacgccggaatcttcggcactggctccgatggccacacgctgccgtcgga 6925 Query: 515 ggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 | | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6924 gacggtgcgggcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 6865 Query: 575 c 575 | Sbjct: 6864 c 6864 Score = 103 bits (52), Expect = 6e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 143 ggcggcggccgagctcaccggcagccacctcgacgaggtgaagcggatggtggcgcagtt 202 |||||||| |||||| | || ||||||||||||||||||||||||||||||| | | || Sbjct: 20620 ggcggcggacgagctggcggggagccacctcgacgaggtgaagcggatggtggaggactt 20561 Query: 203 ccgcgagccagtggtgaagatcgagggcgccagcct 238 |||| |||| ||||||||||||||||||||||||| Sbjct: 20560 ccgccagccgctggtgaagatcgagggcgccagcct 20525 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 20398 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccgccgcaccaagga 20342 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 476 cttcggccccggcgccgatggccactcgctgccggcggaggtgtcccgtgcggccatgct 535 ||||||| ||||| |||| |||||| ||||||||||||| | | || ||||| ||||| Sbjct: 18791 cttcggcaccggcaccgacggccacgttctgccggcggaggcgacgcgcgcggcgatgct 18732 Query: 536 cgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||| ||||||||||||||||||||||| |||||||||||| Sbjct: 18731 cgtccgcatcaacaccctcctccagggttactccggcatc 18692 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||| ||||||||||| ||| |||| |||| |||| |||||| Sbjct: 40355 agccacctcgacgaggtgaagaggatggtggcggagtaccgccagcctctggtcaagatc 40296 Query: 225 gagggcgccagcct 238 |||||||| ||||| Sbjct: 40295 gagggcgctagcct 40282 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||||| |||||||| ||| |||| |||| |||| |||||| Sbjct: 26641 agccacctcgacgaggtgaagcgcatggtggccgagtaccgccagccgctggtaaagatc 26582 Query: 225 gagggcgccagcct 238 |||||||||||||| Sbjct: 26581 gagggcgccagcct 26568 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 505 tgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggct 564 |||||||||||| |||| ||||| |||||||| ||||||||||| ||||||||||| | Sbjct: 39905 tgccggcggaggcaacccgcgcggcaatgctcgtccgcatcaacacactcctccagggat 39846 Query: 565 actccggcatc 575 ||||||||||| Sbjct: 39845 actccggcatc 39835 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 26290 gcggcgatgctcgtccgcatcaacactctcctccagggctactcaggcatc 26240 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccac 413 |||| |||||| ||||||||||||||||||| ||| |||||| Sbjct: 26443 gacagctacggtgtcaccaccggcttcggcgccacgtcccac 26402 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccac 413 |||| |||||| ||||||||||| ||||||| ||| |||||| Sbjct: 40157 gacagctacggtgtcaccaccggtttcggcgccacgtcccac 40116 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 20449 ccgcgtcaaggccagcagcga 20429 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 40208 cgcgtcaaggccagcagcga 40189 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 26494 cgcgtcaaggccagcagcga 26475
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 464 bits (234), Expect = e-127 Identities = 312/338 (92%) Strand = Plus / Minus Query: 121 aggacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgagg 180 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 156950 aggacccgctcaactggggcgcggcggcggccgagatggccggcagccacctcgacgagg 156891 Query: 181 tgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcctcc 240 ||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||| Sbjct: 156890 tgaagcgcatggtggcgcagttccgcgagccgctggtcaagatccagggcgccaccctcc 156831 Query: 241 gcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcgggcgtctccgtggagc 300 |||||||||||||||| ||||| ||||||||||||||||| | |||||| |||| |||| Sbjct: 156830 gcgtcggccaggtggccgccgtcgcccaggccaaggacgccgccggcgtcgccgtcgagc 156771 Query: 301 tcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtggatcctcagctgcctcg 360 ||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 156770 tcgacgaggaggcccgcccccgcgtcaaggccagcagcgagtggatcctcaactgcatcg 156711 Query: 361 ccggcgggggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156710 cccacggcggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgca 156651 Query: 421 ccaaggacgggcccgccctccaggtggagctcctcagg 458 |||||||||| ||||||||||| || |||||||||||| Sbjct: 156650 ccaaggacggccccgccctccaagtcgagctcctcagg 156613 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 455 caggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggcgga 514 ||||||||| ||||| |||||||||||| | ||| ||||||||||| |||||||| |||| Sbjct: 155279 caggcatctcaacgccggaatcttcggcactggctccgatggccacacgctgccgtcgga 155220 Query: 515 ggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 | | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155219 gacggtgcgggcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 155160 Query: 575 c 575 | Sbjct: 155159 c 155159
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 434 bits (219), Expect = e-118 Identities = 363/411 (88%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 |||||||| |||||||||||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 85 agccacctggacgaggtgaagcgcatggtggcgcagtcacgggaggccgtggtgaagatc 144 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcg 284 ||||| ||||||||||||||||||||||||| ||||| || |||||||||||| || Sbjct: 145 gaggggtccagcctccgcgtcggccaggtggccgccgtctccgcggccaaggacgcctcc 204 Query: 285 ggcgtctccgtggagctcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtgg 344 ||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 205 ggcgtggtggtcgagctggacgaggaggcccgcccccgcgtcaaggccagcagcgagtgg 264 Query: 345 atcctcagctgcctcgccggcgggggcgacatctacggcgtcaccaccggcttcggcggc 404 ||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 265 atcctcaactgcatcgcccacggcggcgacatctacggcgtcaccaccggcttcggcggc 324 Query: 405 acctcccaccgccgcaccaaggacgggcccgccctccaggtggagctcctcaggcatctg 464 |||||||||||||||||||||||||| | |||||||| || ||||| ||||||||||| Sbjct: 325 acctcccaccgccgcaccaaggacggccaggccctccaagttgagctgctcaggcatctc 384 Query: 465 aacgctggaatcttcggccccggcgccgatggccactcgctgccggcggaggtgtcccgt 524 || || |||||||||||| |||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 385 aatgccggaatcttcggcaacggctccgatggcaactcgctgccgtcggaggtgtcgcgt 444 Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| ||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 445 gcggcgatgcttgtgcgcatcaacaccctgctccagggctactcgggcatc 495
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 434 bits (219), Expect = e-118 Identities = 363/411 (88%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 |||||||| |||||||||||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 177 agccacctggacgaggtgaagcgcatggtggcgcagtcacgggaggccgtggtgaagatc 236 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcg 284 ||||| ||||||||||||||||||||||||| ||||| || |||||||||||| || Sbjct: 237 gaggggtccagcctccgcgtcggccaggtggccgccgtctccgcggccaaggacgcctcc 296 Query: 285 ggcgtctccgtggagctcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtgg 344 ||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 297 ggcgtggtggtcgagctggacgaggaggcccgcccccgcgtcaaggccagcagcgagtgg 356 Query: 345 atcctcagctgcctcgccggcgggggcgacatctacggcgtcaccaccggcttcggcggc 404 ||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 357 atcctcaactgcatcgcccacggcggcgacatctacggcgtcaccaccggcttcggcggc 416 Query: 405 acctcccaccgccgcaccaaggacgggcccgccctccaggtggagctcctcaggcatctg 464 |||||||||||||||||||||||||| | |||||||| || ||||| ||||||||||| Sbjct: 417 acctcccaccgccgcaccaaggacggccaggccctccaagttgagctgctcaggcatctc 476 Query: 465 aacgctggaatcttcggccccggcgccgatggccactcgctgccggcggaggtgtcccgt 524 || || |||||||||||| |||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 477 aatgccggaatcttcggcaacggctccgatggcaactcgctgccgtcggaggtgtcgcgt 536 Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| ||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 537 gcggcgatgcttgtgcgcatcaacaccctgctccagggctactcgggcatc 587
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 402 bits (203), Expect = e-109 Identities = 341/387 (88%) Strand = Plus / Plus Query: 189 atggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcctccgcgtcggc 248 ||||||||||||| || ||| | ||||||||||||||||| ||||||||||||||||| Sbjct: 1 atggtggcgcagtcacgggaggccgtggtgaagatcgaggggtccagcctccgcgtcggc 60 Query: 249 caggtggcggccgtggcccaggccaaggacgcgtcgggcgtctccgtggagctcgacgag 308 |||||||| ||||| || |||||||||||| || ||||| || ||||| |||||| Sbjct: 61 caggtggccgccgtctccgcggccaaggacgcctccggcgtggtggtcgagctggacgag 120 Query: 309 gaggcgcggccccgcgtcaaggccagcagcgagtggatcctcagctgcctcgccggcggg 368 ||||| || |||||||||||||||||||||||||||||||||| |||| ||||| ||| Sbjct: 121 gaggcccgcccccgcgtcaaggccagcagcgagtggatcctcaactgcatcgcccacggc 180 Query: 369 ggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaaggac 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaaggac 240 Query: 429 gggcccgccctccaggtggagctcctcaggcatctgaacgctggaatcttcggccccggc 488 || | |||||||| || ||||| ||||||||||| || || |||||||||||| |||| Sbjct: 241 ggccaggccctccaagttgagctgctcaggcatctcaatgccggaatcttcggcaacggc 300 Query: 489 gccgatggccactcgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaac 548 |||||||| ||||||||||| |||||||||| |||||||| ||||| |||||||||||| Sbjct: 301 tccgatggcaactcgctgccgtcggaggtgtcgcgtgcggcgatgcttgtgcgcatcaac 360 Query: 549 accctcctccagggctactccggcatc 575 ||||| |||||||||||||| |||||| Sbjct: 361 accctgctccagggctactcgggcatc 387
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 305 bits (154), Expect = 8e-80 Identities = 259/294 (88%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 |||||||| |||||||||||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 100738 agccacctggacgaggtgaagcgcatggtggcgcagtcacgggaggccgtggtgaagatc 100679 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcg 284 ||||| ||||||||||||||||||||||||| ||||| || |||||||||||| || Sbjct: 100678 gaggggtccagcctccgcgtcggccaggtggccgccgtctccgcggccaaggacgcctcc 100619 Query: 285 ggcgtctccgtggagctcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtgg 344 ||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 100618 ggcgtggtggtcgagctggacgaggaggcccgcccccgcgtcaaggccagcagcgagtgg 100559 Query: 345 atcctcagctgcctcgccggcgggggcgacatctacggcgtcaccaccggcttcggcggc 404 ||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 100558 atcctcaactgcatcgcccacggcggcgacatctacggcgtcaccaccggcttcggcggc 100499 Query: 405 acctcccaccgccgcaccaaggacgggcccgccctccaggtggagctcctcagg 458 |||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 100498 acctcccaccgccgcaccaaggacggccaggccctccaagttgagctgctcagg 100445 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 455 caggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggcgga 514 ||||||||| || || |||||||||||| |||| |||||||| ||||||||||| |||| Sbjct: 99775 caggcatctcaatgccggaatcttcggcaacggctccgatggcaactcgctgccgtcgga 99716 Query: 515 ggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 |||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 99715 ggtgtcgcgtgcggcgatgcttgtgcgcatcaacaccctgctccagggctactcgggcat 99656 Query: 575 c 575 | Sbjct: 99655 c 99655 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||||| |||| ||||| || |||| |||| Sbjct: 120375 gacccgctcaactgggggaaggcggcggaggagctgtccgggagccatctggacgcggtg 120316 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||||| ||||||| | ||| |||| ||| ||||||| |||||||||||||||||| Sbjct: 120315 aagcgcatggtggaggagtaccgcaggcccgtggtgacgatcgagggcgccagcct 120260 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccg 415 ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 120136 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccg 120092 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||||||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 119888 gccatgctcgtccgcatcaacactctgctccaggggtactctggcatc 119841 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 120187 ccgcgtcaaggccagcagcga 120167
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 305 bits (154), Expect = 8e-80 Identities = 259/294 (88%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 |||||||| |||||||||||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 25883328 agccacctggacgaggtgaagcgcatggtggcgcagtcacgggaggccgtggtgaagatc 25883269 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcg 284 ||||| ||||||||||||||||||||||||| ||||| || |||||||||||| || Sbjct: 25883268 gaggggtccagcctccgcgtcggccaggtggccgccgtctccgcggccaaggacgcctcc 25883209 Query: 285 ggcgtctccgtggagctcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtgg 344 ||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 25883208 ggcgtggtggtcgagctggacgaggaggcccgcccccgcgtcaaggccagcagcgagtgg 25883149 Query: 345 atcctcagctgcctcgccggcgggggcgacatctacggcgtcaccaccggcttcggcggc 404 ||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 25883148 atcctcaactgcatcgcccacggcggcgacatctacggcgtcaccaccggcttcggcggc 25883089 Query: 405 acctcccaccgccgcaccaaggacgggcccgccctccaggtggagctcctcagg 458 |||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 25883088 acctcccaccgccgcaccaaggacggccaggccctccaagttgagctgctcagg 25883035 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 455 caggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggcgga 514 ||||||||| || || |||||||||||| |||| |||||||| ||||||||||| |||| Sbjct: 25882365 caggcatctcaatgccggaatcttcggcaacggctccgatggcaactcgctgccgtcgga 25882306 Query: 515 ggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 |||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 25882305 ggtgtcgcgtgcggcgatgcttgtgcgcatcaacaccctgctccagggctactcgggcat 25882246 Query: 575 c 575 | Sbjct: 25882245 c 25882245 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||||| |||| ||||| || |||| |||| Sbjct: 25902965 gacccgctcaactgggggaaggcggcggaggagctgtccgggagccatctggacgcggtg 25902906 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||||| ||||||| | ||| |||| ||| ||||||| |||||||||||||||||| Sbjct: 25902905 aagcgcatggtggaggagtaccgcaggcccgtggtgacgatcgagggcgccagcct 25902850 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccg 415 ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 25902726 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccg 25902682 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||||||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 25902478 gccatgctcgtccgcatcaacactctgctccaggggtactctggcatc 25902431 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 25902777 ccgcgtcaaggccagcagcga 25902757
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 305 bits (154), Expect = 8e-80 Identities = 259/294 (88%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 |||||||| |||||||||||||| ||||||||||||| || ||| | |||||||||||| Sbjct: 9590 agccacctggacgaggtgaagcgcatggtggcgcagtcacgggaggccgtggtgaagatc 9531 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgtggcccaggccaaggacgcgtcg 284 ||||| ||||||||||||||||||||||||| ||||| || |||||||||||| || Sbjct: 9530 gaggggtccagcctccgcgtcggccaggtggccgccgtctccgcggccaaggacgcctcc 9471 Query: 285 ggcgtctccgtggagctcgacgaggaggcgcggccccgcgtcaaggccagcagcgagtgg 344 ||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 9470 ggcgtggtggtcgagctggacgaggaggcccgcccccgcgtcaaggccagcagcgagtgg 9411 Query: 345 atcctcagctgcctcgccggcgggggcgacatctacggcgtcaccaccggcttcggcggc 404 ||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 9410 atcctcaactgcatcgcccacggcggcgacatctacggcgtcaccaccggcttcggcggc 9351 Query: 405 acctcccaccgccgcaccaaggacgggcccgccctccaggtggagctcctcagg 458 |||||||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 9350 acctcccaccgccgcaccaaggacggccaggccctccaagttgagctgctcagg 9297 Score = 137 bits (69), Expect = 4e-29 Identities = 108/121 (89%) Strand = Plus / Minus Query: 455 caggcatctgaacgctggaatcttcggccccggcgccgatggccactcgctgccggcgga 514 ||||||||| || || |||||||||||| |||| |||||||| ||||||||||| |||| Sbjct: 8627 caggcatctcaatgccggaatcttcggcaacggctccgatggcaactcgctgccgtcgga 8568 Query: 515 ggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 |||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 8567 ggtgtcgcgtgcggcgatgcttgtgcgcatcaacaccctgctccagggctactcgggcat 8508 Query: 575 c 575 | Sbjct: 8507 c 8507 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||||| |||| ||||| || |||| |||| Sbjct: 29227 gacccgctcaactgggggaaggcggcggaggagctgtccgggagccatctggacgcggtg 29168 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||||| ||||||| | ||| |||| ||| ||||||| |||||||||||||||||| Sbjct: 29167 aagcgcatggtggaggagtaccgcaggcccgtggtgacgatcgagggcgccagcct 29112 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccg 415 ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 28988 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccg 28944 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||||||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 28740 gccatgctcgtccgcatcaacactctgctccaggggtactctggcatc 28693 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 29039 ccgcgtcaaggccagcagcga 29019
>gb|AY106831.1| Zea mays PCO142079 mRNA sequence Length = 2299 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 369 ggcgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaaggac 428 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 140 ggcgacatctacggcgtcaccaccggcttcggcggcacctcgcaccgccgcaccaaggac 199 Query: 429 gggcccgccctccaggtggagctcctcaggcatctgaacgctggaatcttcggccccggc 488 ||| |||| |||||||| ||||| ||||||||||| || || || ||||||||| |||| Sbjct: 200 ggggccgcgctccaggtcgagctgctcaggcatctcaatgccgggatcttcggcaacggc 259 Query: 489 gccgatggccactcgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaac 548 |||| |||||| |||| ||| | ||||| || ||||||||||||||||| ||||||||| Sbjct: 260 tccgacggccacacgctcccgtccgaggtttcgcgtgcggccatgctcgtccgcatcaac 319 Query: 549 accctcctccagggctactccggcatc 575 ||||||||||||||||||||||||||| Sbjct: 320 accctcctccagggctactccggcatc 346
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 145 bits (73), Expect = 2e-31 Identities = 172/205 (83%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaaggacgg 430 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 473 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccgccgcaccaaggaggg 532 Query: 431 gcccgccctccaggtggagctcctcaggcatctgaacgctggaatcttcggccccggcgc 490 ||| |||||| ||||||| |||| || || || || ||||||| ||||| | Sbjct: 533 cggcgcgctccagagggagctcatcagattcctcaatgccggcgccttcggcaccggcac 592 Query: 491 cgatggccactcgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacac 550 ||| |||||| ||||||||||||| | | || ||||| |||||||| ||||||||||| Sbjct: 593 cgacggccacgttctgccggcggaggcgacgcgcgcggcgatgctcgtccgcatcaacac 652 Query: 551 cctcctccagggctactccggcatc 575 |||||||||||| |||||||||||| Sbjct: 653 cctcctccagggttactccggcatc 677 Score = 103 bits (52), Expect = 6e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 143 ggcggcggccgagctcaccggcagccacctcgacgaggtgaagcggatggtggcgcagtt 202 |||||||| |||||| | || ||||||||||||||||||||||||||||||| | | || Sbjct: 251 ggcggcggacgagctggcggggagccacctcgacgaggtgaagcggatggtggaggactt 310 Query: 203 ccgcgagccagtggtgaagatcgagggcgccagcct 238 |||| |||| ||||||||||||||||||||||||| Sbjct: 311 ccgccagccgctggtgaagatcgagggcgccagcct 346 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 422 ccgcgtcaaggccagcagcga 442
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 145 bits (73), Expect = 2e-31 Identities = 172/205 (83%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaaggacgg 430 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 473 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccgccgcaccaaggaggg 532 Query: 431 gcccgccctccaggtggagctcctcaggcatctgaacgctggaatcttcggccccggcgc 490 ||| |||||| ||||||| |||| || || || || ||||||| ||||| | Sbjct: 533 cggcgcgctccagagggagctcatcagattcctcaatgccggcgccttcggcaccggcac 592 Query: 491 cgatggccactcgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacac 550 ||| |||||| ||||||||||||| | | || ||||| |||||||| ||||||||||| Sbjct: 593 cgacggccacgttctgccggcggaggcgacgcgcgcggcgatgctcgtccgcatcaacac 652 Query: 551 cctcctccagggctactccggcatc 575 |||||||||||| |||||||||||| Sbjct: 653 cctcctccagggttactccggcatc 677 Score = 103 bits (52), Expect = 6e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 143 ggcggcggccgagctcaccggcagccacctcgacgaggtgaagcggatggtggcgcagtt 202 |||||||| |||||| | || ||||||||||||||||||||||||||||||| | | || Sbjct: 251 ggcggcggacgagctggcggggagccacctcgacgaggtgaagcggatggtggaggactt 310 Query: 203 ccgcgagccagtggtgaagatcgagggcgccagcct 238 |||| |||| ||||||||||||||||||||||||| Sbjct: 311 ccgccagccgctggtgaagatcgagggcgccagcct 346 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 422 ccgcgtcaaggccagcagcga 442
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 174 gacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgcc 233 |||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 118 gacgaggtgaagcggatggtggcggagtaccgccagccggtggtgaagatcgagggcgcc 177 Query: 234 agcct 238 ||||| Sbjct: 178 agcct 182 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 460 gcggccatgctcgtccgcatcaacaccctcctccagggctattccgg 506 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcgg 400 ||||| |||||| ||||||||||||||||| Sbjct: 306 cgacagctacggtgtcaccaccggcttcgg 335 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 256 cgcgtcaaggccagcagcga 275
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 95.6 bits (48), Expect = 2e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||| | |||| |||||||||||||||||| Sbjct: 70 gacccgctcaactgggggaaggcggcggaggagatggccgggagccacctcgacgaggtg 129 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||| ||||||||||| ||| ||| |||| |||||| |||||||||||||||||| Sbjct: 130 aagaggatggtggcggagtaccggcagcccgtggtgcggatcgagggcgccagcct 185 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||| |||||||||||||||||| ||||||| ||| || ||||| || |||||||| Sbjct: 318 cgacagctacggcgtcaccaccgggttcggcgccacgtcgcaccggcggaccaagga 374 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| |||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 472 gcggcgatgctcgtccggatcaacaccctgctgcaaggctactccggcatc 522 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 297 gagctcgacgaggaggcgcggccccgcgtcaaggccagcagcga 340 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 244 gagctcgacgagtcggcgcgggagcgcgtcaaggccagcagcga 287
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 95.6 bits (48), Expect = 2e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||| | |||| |||||||||||||||||| Sbjct: 124702 gacccgctcaactgggggaaggcggcggaggagatggccgggagccacctcgacgaggtg 124643 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||| ||||||||||| ||| ||| |||| |||||| |||||||||||||||||| Sbjct: 124642 aagaggatggtggcggagtaccggcagcccgtggtgcggatcgagggcgccagcct 124587 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||| |||||||||||||||||| ||||||| ||| || ||||| || |||||||| Sbjct: 124454 cgacagctacggcgtcaccaccgggttcggcgccacgtcgcaccggcggaccaagga 124398 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| |||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 124300 gcggcgatgctcgtccggatcaacaccctgctgcaaggctactccggcatc 124250 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 297 gagctcgacgaggaggcgcggccccgcgtcaaggccagcagcga 340 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 124528 gagctcgacgagtcggcgcgggagcgcgtcaaggccagcagcga 124485
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 95.6 bits (48), Expect = 2e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||| | |||| |||||||||||||||||| Sbjct: 67283 gacccgctcaactgggggaaggcggcggaggagatggccgggagccacctcgacgaggtg 67224 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||| ||||||||||| ||| ||| |||| |||||| |||||||||||||||||| Sbjct: 67223 aagaggatggtggcggagtaccggcagcccgtggtgcggatcgagggcgccagcct 67168 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||| |||||||||||||||||| ||||||| ||| || ||||| || |||||||| Sbjct: 67035 cgacagctacggcgtcaccaccgggttcggcgccacgtcgcaccggcggaccaagga 66979 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| |||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 66881 gcggcgatgctcgtccggatcaacaccctgctgcaaggctactccggcatc 66831 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 297 gagctcgacgaggaggcgcggccccgcgtcaaggccagcagcga 340 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 67109 gagctcgacgagtcggcgcgggagcgcgtcaaggccagcagcga 67066
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 95.6 bits (48), Expect = 2e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||| | |||| |||||||||||||||||| Sbjct: 20811478 gacccgctcaactgggggaaggcggcggaggagatggccgggagccacctcgacgaggtg 20811419 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||| ||||||||||| ||| ||| |||| |||||| |||||||||||||||||| Sbjct: 20811418 aagaggatggtggcggagtaccggcagcccgtggtgcggatcgagggcgccagcct 20811363 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||| |||||||||||||||||| ||||||| ||| || ||||| || |||||||| Sbjct: 20811230 cgacagctacggcgtcaccaccgggttcggcgccacgtcgcaccggcggaccaagga 20811174 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| |||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 20811076 gcggcgatgctcgtccggatcaacaccctgctgcaaggctactccggcatc 20811026 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 297 gagctcgacgaggaggcgcggccccgcgtcaaggccagcagcga 340 |||||||||||| ||||||| |||||||||||||||||||| Sbjct: 20811304 gagctcgacgagtcggcgcgggagcgcgtcaaggccagcagcga 20811261
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 476 cttcggccccggcgccgatggccactcgctgccggcggaggtgtcccgtgcggccatgct 535 ||||||| ||||| |||| |||||| ||||||||||||| | | || ||||| ||||| Sbjct: 3011 cttcggcaccggcaccgacggccacgttctgccggcggaggcgacgcgcgcggcgatgct 3070 Query: 536 cgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||| ||||||||||||||||||||||| |||||||||||| Sbjct: 3071 cgtccgcatcaacaccctcctccagggttactccggcatc 3110 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 143 ggcggcggccgagctcaccggcagccacctcgacgaggtgaagcggatggtggcgcagtt 202 |||||||| |||||| | || ||||||||||||||||||||||||||||||| | | || Sbjct: 1195 ggcggcggacgagctggcggggagccacctcgacgaggtgaagcggatggtggaggactt 1254 Query: 203 ccgcgagccagtggtgaagatcgagggcgccagcct 238 |||| ||| ||||||||||||||||||||||||| Sbjct: 1255 ccgccagcgcctggtgaagatcgagggcgccagcct 1290 Score = 83.8 bits (42), Expect = 6e-13 Identities = 55/58 (94%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcacca-ccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 1417 cgacagctacggcgtcaccaaccggcttcggcgccacctcccaccgccgcaccaagga 1474 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 1366 ccgcgtcaaggccagcagcga 1386
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||||| |||||||| ||| |||| |||| |||| |||||| Sbjct: 112 agccacctcgacgaggtgaagcgcatggtggccgagtaccgccagccgctggtaaagatc 171 Query: 225 gagggcgccagcct 238 |||||||||||||| Sbjct: 172 gagggcgccagcct 185 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 463 gcggcgatgctcgtccgcatcaacactctcctccagggctactcaggcatc 513 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccac 413 |||| |||||| ||||||||||||||||||| ||| |||||| Sbjct: 310 gacagctacggtgtcaccaccggcttcggcgccacgtcccac 351 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 259 cgcgtcaaggccagcagcga 278
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||| ||||||||||| ||| |||| |||| |||| |||||| Sbjct: 147 agccacctcgacgaggtgaagaggatggtggcggagtaccgccagcctctggtcaagatc 206 Query: 225 gagggcgccagcct 238 |||||||| ||||| Sbjct: 207 gagggcgctagcct 220 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 505 tgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggct 564 |||||||||||| |||| ||||| |||||||| ||||||||||| ||||||||||| | Sbjct: 478 tgccggcggaggcaacccgcgcggcaatgctcgtccgcatcaacacactcctccagggat 537 Query: 565 actccggcatc 575 ||||||||||| Sbjct: 538 actccggcatc 548 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccac 413 |||| |||||| ||||||||||| ||||||| ||| |||||| Sbjct: 345 gacagctacggtgtcaccaccggtttcggcgccacgtcccac 386 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 294 cgcgtcaaggccagcagcga 313
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||| ||||||||| | ||| ||||| ||| ||||||||||| Sbjct: 20333828 agccacctcgacgaggtgaagaggatggtggtggagtaccgcgcgccgctggtgaagatc 20333887 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgt 262 || ||||||| ||| |||||| | ||||||| ||||| Sbjct: 20333888 gacggcgccatgctcagcgtcgccaaggtggcagccgt 20333925 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 502 cgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagg 561 |||||||| ||||||| | || || |||||||| |||||||||||||||||| ||||| Sbjct: 20334288 cgctgccgacggaggtcactcgcgcagccatgctggtgcgcatcaacaccctcacccagg 20334347 Query: 562 gctactccggcatc 575 ||||||| |||||| Sbjct: 20334348 gctactcgggcatc 20334361 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 20334035 tacggcgtcaccaccggcttcggaggtgccgcccaccgccgcaccaagga 20334084 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 136 ggggcgcggcggcggccgagctcaccggc 164 |||||||| |||||||||||||| ||||| Sbjct: 4521661 ggggcgcgccggcggccgagctcgccggc 4521633 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cggccaccaccaccacccac 85 |||||||||||||||||||| Sbjct: 23695679 cggccaccaccaccacccac 23695660
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||| ||||||||||| ||| |||| |||| |||| |||||| Sbjct: 146 agccacctcgacgaggtgaagaggatggtggcggagtaccgccagcctctggtcaagatc 205 Query: 225 gagggcgccagcct 238 |||||||| ||||| Sbjct: 206 gagggcgctagcct 219 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 505 tgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggct 564 |||||||||||| |||| ||||| |||||||| ||||||||||| ||||||||||| | Sbjct: 477 tgccggcggaggcaacccgcgcggcaatgctcgtccgcatcaacacactcctccagggat 536 Query: 565 actccggcatc 575 ||||||||||| Sbjct: 537 actccggcatc 547 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccac 413 |||| |||||| ||||||||||| ||||||| ||| |||||| Sbjct: 344 gacagctacggtgtcaccaccggtttcggcgccacgtcccac 385 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 293 cgcgtcaaggccagcagcga 312
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||| ||||||||| | ||| ||||| ||| ||||||||||| Sbjct: 20260042 agccacctcgacgaggtgaagaggatggtggtggagtaccgcgcgccgctggtgaagatc 20260101 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgt 262 || ||||||| ||| |||||| | ||||||| ||||| Sbjct: 20260102 gacggcgccatgctcagcgtcgccaaggtggcagccgt 20260139 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 502 cgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagg 561 |||||||| ||||||| | || || |||||||| |||||||||||||||||| ||||| Sbjct: 20260502 cgctgccgacggaggtcactcgcgcagccatgctggtgcgcatcaacaccctcacccagg 20260561 Query: 562 gctactccggcatc 575 ||||||| |||||| Sbjct: 20260562 gctactcgggcatc 20260575 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 20260249 tacggcgtcaccaccggcttcggaggtgccgcccaccgccgcaccaagga 20260298 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 136 ggggcgcggcggcggccgagctcaccggc 164 |||||||| |||||||||||||| ||||| Sbjct: 4521642 ggggcgcgccggcggccgagctcgccggc 4521614 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cggccaccaccaccacccac 85 |||||||||||||||||||| Sbjct: 23623867 cggccaccaccaccacccac 23623848
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||||||||||||| ||||||||| | ||| ||||| ||| ||||||||||| Sbjct: 177873 agccacctcgacgaggtgaagaggatggtggtggagtaccgcgcgccgctggtgaagatc 177814 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgt 262 || ||||||| ||| |||||| | ||||||| ||||| Sbjct: 177813 gacggcgccatgctcagcgtcgccaaggtggcagccgt 177776 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 177666 tacggcgtcaccaccggcttcggaggtgccgcccaccgccgcaccaagga 177617 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 502 cgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagg 561 |||||||| ||||||| | || || |||||||| |||||||||||||||||| ||||| Sbjct: 177413 cgctgccgacggaggtcactcgcgcagccatgctggtgcgcatcaacaccctcacccagg 177354 Query: 562 gctactccggcatc 575 ||||||| |||||| Sbjct: 177353 gctactcgggcatc 177340
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||||| |||| ||||| || |||| |||| Sbjct: 73 gacccgctcaactgggggaaggcggcggaggagctgtccgggagccatctggacgcggtg 132 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||||| ||||||| | ||| |||| ||| ||||||| |||||||||||||||||| Sbjct: 133 aagcgcatggtggaggagtaccgcaggcccgtggtgacgatcgagggcgccagcct 188 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccg 415 ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 312 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccg 356 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||||||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 469 gccatgctcgtccgcatcaacactctgctccaggggtactctggcatc 516 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 261 ccgcgtcaaggccagcagcga 281
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||||||||||||||| |||||||| ||||| |||| ||||| || |||| |||| Sbjct: 198 gacccgctcaactgggggaaggcggcggaggagctgtccgggagccatctggacgcggtg 257 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||||| ||||||| | ||| |||| ||| ||||||| |||||||||||||||||| Sbjct: 258 aagcgcatggtggaggagtaccgcaggcccgtggtgacgatcgagggcgccagcct 313 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccg 415 ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 437 cgacagctacggcgtcaccaccggcttcggcgccacctcccaccg 481 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||||||||| ||||||||||| || |||||||| ||||| |||||| Sbjct: 594 gccatgctcgtccgcatcaacactctgctccaggggtactctggcatc 641 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ccgcgtcaaggccagcagcga 340 ||||||||||||||||||||| Sbjct: 386 ccgcgtcaaggccagcagcga 406
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 505 tgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggct 564 |||||||||||| |||| ||||| |||||||| ||||||||||| ||||||||||| | Sbjct: 2883 tgccggcggaggcaacccgggcggcaatgctcgtccgcatcaacacactcctccagggat 2942 Query: 565 actccggcatc 575 ||||||||||| Sbjct: 2943 actccggcatc 2953 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 172 tcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcg 231 |||||||||||||| |||| | ||| ||| |||| |||| |||| ||||||||||||| Sbjct: 2442 tcgacgaggtgaagaggattggtgcggagtaccgccagcctctggtcaagatcgagggcg 2501 Query: 232 ccagcct 238 | ||||| Sbjct: 2502 ctagcct 2508 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccac 413 |||| |||||| ||||||||||| ||||||| ||| |||||| Sbjct: 2633 gacagctacggtgtcaccaccggtttcggcgccacgtcccac 2674 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgcgtcaaggccagcagcga 340 |||||||||||||||||||| Sbjct: 2582 cgcgtcaaggccagcagcga 2601
>gb|AF229429.1| Brassica oleracea cultivar Rapid Cycling phenylalanine ammonia-lyase (PAL-BO-1) gene, partial cds Length = 514 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 125 gccatgctcgtacgcatcaacaccctcctccaaggctactccggcat 171
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 502 cgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagg 561 |||||||| ||||||| | || || ||||||||||||||||||||||||||| ||||| Sbjct: 108953 cgctgccgacggaggtcacgcgcgcagccatgctcgtgcgcatcaacaccctcacccagg 109012 Query: 562 gctactccggcatc 575 ||||||| |||||| Sbjct: 109013 gctactcgggcatc 109026 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 108674 tacggcgtcaccaccggcttcgggggtgccgcccaccgccgcaccaagga 108723 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||| ||||||||| ||||||||| ||| ||||| ||| ||||||||||| Sbjct: 108467 agccacctcgaggaggtgaagaggatggtggttgagtaccgcgcgccgctggtgaagatc 108526 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgt 262 || ||||||| ||| |||||| | ||||||| ||||| Sbjct: 108527 gacggcgccatgctcagcgtcgccaaggtggcagccgt 108564
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 502 cgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagg 561 |||||||| ||||||| | || || ||||||||||||||||||||||||||| ||||| Sbjct: 28379021 cgctgccgacggaggtcacgcgcgcagccatgctcgtgcgcatcaacaccctcacccagg 28379080 Query: 562 gctactccggcatc 575 ||||||| |||||| Sbjct: 28379081 gctactcgggcatc 28379094 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 28378742 tacggcgtcaccaccggcttcgggggtgccgcccaccgccgcaccaagga 28378791 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||| ||||||||| ||||||||| ||| ||||| ||| ||||||||||| Sbjct: 28378535 agccacctcgaggaggtgaagaggatggtggttgagtaccgcgcgccgctggtgaagatc 28378594 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgt 262 || ||||||| ||| |||||| | ||||||| ||||| Sbjct: 28378595 gacggcgccatgctcagcgtcgccaaggtggcagccgt 28378632 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 380 cggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 ||||||||||||||||| ||||||||| ||||||||||| Sbjct: 26884525 cggcgtcaccaccggctctcgcggcacct-ccaccgccgca 26884564
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 502 cgctgccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagg 561 |||||||| ||||||| | || || ||||||||||||||||||||||||||| ||||| Sbjct: 28361470 cgctgccgacggaggtcacgcgcgcagccatgctcgtgcgcatcaacaccctcacccagg 28361529 Query: 562 gctactccggcatc 575 ||||||| |||||| Sbjct: 28361530 gctactcgggcatc 28361543 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaagga 427 ||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 28361191 tacggcgtcaccaccggcttcgggggtgccgcccaccgccgcaccaagga 28361240 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatc 224 ||||||||||| ||||||||| ||||||||| ||| ||||| ||| ||||||||||| Sbjct: 28360984 agccacctcgaggaggtgaagaggatggtggttgagtaccgcgcgccgctggtgaagatc 28361043 Query: 225 gagggcgccagcctccgcgtcggccaggtggcggccgt 262 || ||||||| ||| |||||| | ||||||| ||||| Sbjct: 28361044 gacggcgccatgctcagcgtcgccaaggtggcagccgt 28361081 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 380 cggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 ||||||||||||||||| ||||||||| ||||||||||| Sbjct: 27211578 cggcgtcaccaccggctctcgcggcacct-ccaccgccgca 27211617
>dbj|AB015870.1| Vitis vinifera gene for phenylalanine ammonia-lyase, partial cds Length = 1938 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 |||||||||||| | ||||||||||||||||| ||||||||||||||| Sbjct: 1436 gccatgctcgtgaggatcaacaccctcctccaaggctactccggcatc 1483
>dbj|D21290.1|RICSS577 Oryza sativa SS577 mRNA for phenylalanine ammonia-lyase, partial sequence Length = 270 Score = 69.9 bits (35), Expect = 9e-09 Identities = 60/69 (86%) Strand = Plus / Plus Query: 507 ccggcggaggtgtcccgtgcggccatgctcgtgcgcatcaacaccctcctccagggctac 566 |||||||||| |||| ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 162 ccggcggaggcaacccgcgcggcaatgctcgtccgcatcaacacactcctccagggntac 221 Query: 567 tccggcatc 575 ||||| ||| Sbjct: 222 tccggnatc 230
>emb|X99997.1|BFPAL B.finlaysoniana mRNA for phenylalanine ammonia-lyase Length = 2249 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 531 atgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 519 atgcttgtccgcatcaacaccctcctccaaggctactccggcatc 563 Score = 48.1 bits (24), Expect = 0.032 Identities = 89/108 (82%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||| || |||||||||||||||||||| ||| | ||||| || ||||||||||| Sbjct: 120 gacccacttaactggggcgcggcggcggcggagttgcagggcagtcatctcgacgaggta 179 Query: 183 aagcggatggtggcgcagttcc-gcgagccagtggtgaagatcgaggg 229 ||| |||||||| | |||||| |||| || ||||||||| ||||||| Sbjct: 180 aagaagatggtggaggagttccggcga-ccggtggtgaagctcgaggg 226
>gb|AY803289.1| Pellia epiphylla phenylalanine ammonia lyase (PAL) mRNA, partial cds Length = 2629 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaa 424 |||| ||| ||||||||||| |||||||||| |||||| |||||||||||||| Sbjct: 293 gacacctatggcgtcaccactggcttcggcgccacctcacaccgccgcaccaa 345 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 |||||||| ||||||| |||||||||| | ||||||||||| |||||| Sbjct: 449 gccatgctggtgcgcaccaacaccctcatgcagggctactctggcatc 496
>gb|AF229428.1| Brassica napus cultivar Drakkar phenylalanine ammonia-lyase (PAL-BN-1) gene, partial cds Length = 490 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 ||||||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 128 gccatgctcgtacgcatcaacactctcctccaaggctactcaggcat 174
>gb|AF325496.1|AF325496 Ipomoea nil phenylalanine ammonia-lyase gene, complete cds Length = 5172 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 377 ctacggcgtcaccaccggcttcggcggcacctcccaccg 415 |||||||||||||||||||||||||| |||||| ||||| Sbjct: 1339 ctacggcgtcaccaccggcttcggcgccacctctcaccg 1377
>dbj|AP004502.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT07E11, TM0033b, complete sequence Length = 80917 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgc 416 ||||| ||||||||||||||||||| ||||||||||||| Sbjct: 62900 tacggtgtcaccaccggcttcggcgccacctcccaccgc 62862 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgc 416 ||||| ||||||||||||||||||| ||||||||||||| Sbjct: 55623 tacggtgtcaccaccggcttcggcgccacctcccaccgc 55585 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccg 415 ||||| ||||||||||||||||||| |||||||||||| Sbjct: 47093 tacggtgtcaccaccggcttcggcgccacctcccaccg 47056 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgc 416 ||||| |||||||||||||| |||| ||||||||||||| Sbjct: 77355 tacggtgtcaccaccggctttggcgccacctcccaccgc 77393 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcgcagttccgc 206 ||||||||||||||||| ||||| ||||||||| ||| |||| Sbjct: 63107 agccacctcgacgaggtcaagcgcatggtggcggagtaccgc 63066 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 165 agccacctcgacgaggtgaagcggatggtggcg 197 |||||||| ||||||||||||| ||||||||| Sbjct: 55830 agccacctgaacgaggtgaagcgcatggtggcg 55798
>gb|AY281156.1| Phalaenopsis x Doritaenopsis hybrid cultivar phenylalanine ammonia-lyase gene, complete cds Length = 3263 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 531 atgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| || |||||||||||||||||||| ||||| ||||||||| Sbjct: 1552 atgcttgtccgcatcaacaccctcctccaaggctattccggcatc 1596
>gb|AF299330.1| Lactuca sativa phenylalanine ammonia-lyase mRNA, complete cds Length = 2442 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 |||||||||||||||||||| |||||||||||| Sbjct: 593 atcaacaccctcctccagggttactccggcatc 625 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 gtcaccaccggcttcggcggcacctcccaccg 415 ||||||||||||||||||| |||||| ||||| Sbjct: 431 gtcaccaccggcttcggcgccacctctcaccg 462
>emb|X52953.1|DMPAL1 Glycine max PAL1 gene for phenylalanine ammonia lyase (EC 4.3.1.5) Length = 4085 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaa 424 ||||||||||||||||||||||| | ||| || |||||||| ||||| Sbjct: 501 tacggcgtcaccaccggcttcggtgccacgtcacaccgccgaaccaa 547 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 168 cacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggt 217 ||||| |||||||||||||| |||||||| ||| |||| |||| ||||| Sbjct: 297 cacctggacgaggtgaagcgcatggtggccgagtaccgcaagccggtggt 346
>gb|AY055752.1| Brassica rapa subsp. pekinensis phenylalanine ammonia-lyase (PAL) mRNA, partial cds Length = 720 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 ||||||||||| || |||||||| |||||||| || ||||||||||| Sbjct: 193 gccatgctcgtacgaatcaacactctcctccaaggatactccggcat 239
>gb|AF304367.1|AF304367 Rubus idaeus phenylalanine ammonia-lyase 2 (pal2) gene, partial cds Length = 1776 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 ||||||||||| | |||||||| |||||||| |||||||||||||| Sbjct: 818 gccatgctcgtcagaatcaacacactcctccaaggctactccggcat 864
>gb|AF237955.1|AF237955 Rubus idaeus phenylalanine ammonia-lyase 2 (PAL2) mRNA, complete cds Length = 2439 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 ||||||||||| | |||||||| |||||||| |||||||||||||| Sbjct: 582 gccatgctcgtcagaatcaacacactcctccaaggctactccggcat 628
>gb|AF229430.1| Brassica rapa cultivar R500 phenylalanine ammonia-lyase (PAL-BR-1) gene, partial cds Length = 751 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 ||||||||||| || |||||||| |||||||| || ||||||||||| Sbjct: 362 gccatgctcgtacgtatcaacactctcctccaaggatactccggcat 408
>gb|M29232.1|IPBPAL Sweet potato phenylalanine ammonia-lyase mRNA (PAL), complete cds Length = 2335 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 377 ctacggcgtcaccaccggcttcggcggcacctcccaccg 415 |||||||||||||||||||||||| | |||||| ||||| Sbjct: 313 ctacggcgtcaccaccggcttcggtgccacctctcaccg 351 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 294 gtggagctcgacgaggaggcgcggccccgcgtcaaggccagcag 337 ||||||||| ||||||||| ||| || |||| ||||||||||| Sbjct: 230 gtggagctctccgaggaggcccgggccggcgttaaggccagcag 273
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccg 415 ||||| ||||||||||||||||||| |||||| ||||| Sbjct: 1162 tacggtgtcaccaccggcttcggcgccacctctcaccg 1199 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 179 ggtgaagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgcca 234 ||||||||||||||||| | ||| |||| |||| || |||| ||| |||||||||| Sbjct: 975 ggtgaagcggatggtggaggagtaccgcaagccggtcgtgacgatggagggcgcca 1030
>emb|AJ002221.1|DLJ002221 Digitalis lanata mRNA for phenylalanine ammonia lyase Length = 2403 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 546 aacaccctcctccagggctactccggcatc 575 ||||||||||||||||| |||||||||||| Sbjct: 604 aacaccctcctccagggatactccggcatc 633 Score = 44.1 bits (22), Expect = 0.50 Identities = 73/90 (81%) Strand = Plus / Plus Query: 132 aactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtgaagcggatg 191 ||||||| |||||||||| ||||| | || ||||| || || ||||||||||||||| Sbjct: 193 aactgggtggcggcggcggaggagctgaaggggagccatctggatgaggtgaagcggatg 252 Query: 192 gtggcgcagttccgcgagccagtggtgaag 221 |||| | ||||| | || ||||||||||| Sbjct: 253 gtggaggagttcaggaagacagtggtgaag 282
>emb|Z49147.1|HVPAL7RM H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1777 bp) Length = 1777 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcggcacctcccaccg 415 ||||| ||| || ||||||||||||||||||| |||||| ||||| Sbjct: 439 cgacagctatggtgtcaccaccggcttcggcgccacctctcaccg 483 Score = 48.1 bits (24), Expect = 0.032 Identities = 93/116 (80%) Strand = Plus / Plus Query: 123 gacccgctcaactggggcgcggcggcggccgagctcaccggcagccacctcgacgaggtg 182 ||||| |||||||||||| |||||||| ||||| |||| ||||| | || | ||| Sbjct: 200 gacccactcaactggggcaaggcggcggaggagctgtccgggagccatttggatgccgtg 259 Query: 183 aagcggatggtggcgcagttccgcgagccagtggtgaagatcgagggcgccagcct 238 ||||||||||||| | ||| ||| |||| ||||||| || |||||||||||||| Sbjct: 260 aagcggatggtggaggagtaccgtaagccggtggtgaccatggagggcgccagcct 315
>gb|AF304366.1|AF304366 Rubus idaeus phenylalanine ammonia-lyase 1 (pal1) gene, partial cds Length = 1868 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 ||||||||||| ||||| ||||||||||||||| Sbjct: 924 atcaacacccttctccaaggctactccggcatc 956
>gb|AF326116.1|AF326116 Agastache rugosa phenylalanine ammonia-lyase (PAL) mRNA, complete cds Length = 2448 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 |||||||| |||||||| ||||||||||||||| Sbjct: 584 atcaacactctcctccaaggctactccggcatc 616 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccg 418 ||||||||||||||||||||||| | ||| || |||||||| Sbjct: 416 tacggcgtcaccaccggcttcggtgccacatcacaccgccg 456 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 162 ggcagccacctcgacgaggtgaagcggatggtggcgcagttccgcgagccagtggtgaag 221 ||||||||||| || ||||| ||||||||||||| | ||||| | |||| ||||||||| Sbjct: 206 ggcagccaccttgaggaggtaaagcggatggtggaggagttcaggaagccggtggtgaag 265
>gb|AF411134.1| Lactuca sativa phenylalanine ammonia-lyase2 mRNA, complete cds Length = 2380 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 174 gacgaggtgaagcggatggtggcgcagtt 202 |||||||||||||||||||||||| |||| Sbjct: 197 gacgaggtgaagcggatggtggcggagtt 225 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 |||||||||||||| || || |||||||||||| Sbjct: 566 atcaacaccctccttcaaggttactccggcatc 598
>gb|AY694188.1| Camellia sinensis phenylalanine ammonia-lyase mRNA, complete cds Length = 2241 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcat 574 ||||||||||||||||| || ||||||||||| Sbjct: 526 atcaacaccctcctccaaggatactccggcat 557
>gb|AY724737.1| Taxus x media phenylalanine aminomutase (pam) gene, complete cds Length = 2233 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcg 402 |||||| |||||||||||||| |||||||||| Sbjct: 231 cgacatatacggcgtcaccacgggcttcggcg 262
>gb|AY724736.1| Taxus chinensis phenylalanine aminomutase (pam) gene, complete cds Length = 2411 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcg 402 |||||| |||||||||||||| |||||||||| Sbjct: 293 cgacatatacggcgtcaccacgggcttcggcg 324
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 375 atctacggcgtcaccaccggcttcggcg 402 |||||||||||||||||||||| ||||| Sbjct: 487391 atctacggcgtcaccaccggctacggcg 487364
>emb|Y12461.1|HAPHAMLY Helianthus annuus mRNA for phenylalanine ammonia lyase Length = 2322 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcat 574 |||||||||||||||||||| || |||||||| Sbjct: 593 atcaacaccctcctccagggatattccggcat 624
>gb|AF237954.1|AF237954 Rubus idaeus phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete cds Length = 2501 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 544 tcaacaccctcctccagggctactccggcatc 575 |||||||||| ||||| ||||||||||||||| Sbjct: 598 tcaacacccttctccaaggctactccggcatc 629 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 372 gacatctacggcgtcaccaccggcttcgg 400 |||| |||||| ||||||||||||||||| Sbjct: 423 gacagctacggtgtcaccaccggcttcgg 451
>gb|AF401636.1|AF401636 Rehmannia glutinosa phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2444 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||||||||| || |||||||| |||||||| || || ||||||||| Sbjct: 567 gccatgctcgtccgaatcaacacgctcctccaaggatattccggcatc 614 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 165 agccacctcgacgaggtgaagcggatggtgg 195 |||||||| |||||||||||| ||||||||| Sbjct: 207 agccacctggacgaggtgaagaggatggtgg 237
>gb|AY724735.1| Taxus chinensis phenylalanine aminomutase (pam) mRNA, complete cds Length = 2277 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcg 402 |||||| |||||||||||||| |||||||||| Sbjct: 239 cgacatatacggcgtcaccacgggcttcggcg 270
>gb|AF036948.1|AF036948 Prunus avium phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2448 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcat 574 |||||||| ||||||||||||||||| ||||| Sbjct: 580 atcaacacactcctccagggctactctggcat 611
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 374 catctacggcgtcaccaccggcttcggc 401 |||||||||||||| ||||||||||||| Sbjct: 148179 catctacggcgtcaacaccggcttcggc 148152
>dbj|D26596.1|CMEPAL Camellia sinensis mRNA for phenylalanine ammonia-lyase (PAL), complete cds Length = 2330 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcat 574 ||||||||||||||||| || ||||||||||| Sbjct: 615 atcaacaccctcctccaaggatactccggcat 646
>ref|NM_111869.3| Arabidopsis thaliana ammonia ligase/ ammonia-lyase AT3G10340 mRNA, complete cds Length = 2584 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||| |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 695 gcggcaatgctcgtccgtgtcaacactctcctccaaggctactccgg 741
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence, complete sequence Length = 87937 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||| |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 24737 gcggcaatgctcgtccgtgtcaacactctcctccaaggctactccgg 24691
>gb|BT000252.1| Arabidopsis thaliana putative phenylalanine ammonia-lyase (At3g10340) mRNA, complete cds Length = 2229 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||| |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 448 gcggcaatgctcgtccgtgtcaacactctcctccaaggctactccgg 494
>emb|X58180.1|MSPAL M.sativa PAL mRNA for phenylalanine ammonia-lyase Length = 2409 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcggcacctcccaccgccgcaccaa 424 ||||| ||||||||||| ||||||| |||||| ||| |||| ||||| Sbjct: 445 tacggtgtcaccaccgggttcggcgccacctcgcacagccgtaccaa 491
>emb|AJ278454.1|JNI278454 Juglans nigra mRNA for partial phenylalanine ammonia-lyase (PAL gene) Length = 856 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| ||||| ||| | ||||||||||||||||| || ||||| |||||| Sbjct: 348 gcggcgatgcttgtgaggatcaacaccctcctccaaggttactcgggcatc 398
>gb|AY303130.1| Arabidopsis thaliana phenylalanine ammonia lyase (PAL4) mRNA, complete cds Length = 2124 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||| |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 448 gcggcaatgctcgtccgtgtcaacactctcctccaaggctactccgg 494
>gb|AY099657.1| Arabidopsis thaliana putative phenylalanine ammonia-lyase (At3g10340) mRNA, complete cds Length = 2536 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||| |||||||| || ||||||| |||||||| ||||||||||| Sbjct: 696 gcggcaatgctcgtccgtgtcaacactctcctccaaggctactccgg 742
>gb|DQ183069.1| Zea mays clone A_RGA1 resistance gene analog-like gene, partial sequence Length = 309 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 278 cgcgtcgggcgtctccgtggag 299 |||||||||||||||||||||| Sbjct: 240 cgcgtcgggcgtctccgtggag 219
>gb|AY443341.1| Quercus suber phenylalanine ammonia-lyase (PAL) mRNA, complete cds Length = 2499 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Plus Query: 522 cgtgcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcatc 575 ||||| |||||| | ||| | ||||||||||||||||| || ||||| |||||| Sbjct: 679 cgtgccgccatgttggtgaggatcaacaccctcctccaaggttactcaggcatc 732
>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence Length = 125772 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 ctcaactggggcgcggcggcgg 150 |||||||||||||||||||||| Sbjct: 28429 ctcaactggggcgcggcggcgg 28408
>emb|X76130.1|CMPAL C.melo (cantaloupe) pal mRNA Length = 2125 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 372 gacatctacggcgtcaccaccggcttcggcggcacctc 409 |||| |||||||||||||||||| ||||| | |||||| Sbjct: 31 gacagctacggcgtcaccaccgggttcggtgccacctc 68
>emb|BX897676.1| Neurospora crassa DNA linkage group VI BAC clone B8I24 Length = 83591 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 tttgccggccaccaccaccacc 82 |||||||||||||||||||||| Sbjct: 76409 tttgccggccaccaccaccacc 76430
>emb|AJ238754.1|CCL238754 Citrus clementina X Citrus reticulata mRNA for phenylalanine-ammonia lyase, clone Fpal2 Length = 2471 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 546 aacaccctcctccagggctactccggcatc 575 ||||| || ||||||||||||||||||||| Sbjct: 637 aacactcttctccagggctactccggcatc 666
>gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete cds Length = 2253 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 162 ggcagccacctcgacgaggtgaagcggatggtgg 195 ||||||||||| || ||||||||||| ||||||| Sbjct: 171 ggcagccaccttgatgaggtgaagcgcatggtgg 204
>gb|AF383151.1|AF383151 Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) gene, partial cds Length = 2677 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 162 ggcagccacctcgacgaggtgaagcggatggtgg 195 ||||||||||| || ||||||||||| ||||||| Sbjct: 118 ggcagccaccttgatgaggtgaagcgcatggtgg 151
>gb|AY705976.1| Petunia x hybrida phenylalanine ammonialyase 1 (PAL1) mRNA, complete cds Length = 2535 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 525 gcggccatgctcgtgcgcatcaacaccctcctccagggctactccggcat 574 ||||||||||| ||| | ||||||||||| || || |||||||| ||||| Sbjct: 657 gcggccatgctagtgaggatcaacaccctacttcaaggctactcaggcat 706
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 ttcggccccggcgccgatggc 497 ||||||||||||||||||||| Sbjct: 2256276 ttcggccccggcgccgatggc 2256296
>ref|XM_801241.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503995.20) partial mRNA Length = 2289 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccaccaccaccacccaccga 88 ||||||||||||||||||||| Sbjct: 1518 gccaccaccaccacccaccga 1538
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gcgtcggccaggtggcggccg 261 ||||||||||||||||||||| Sbjct: 2540368 gcgtcggccaggtggcggccg 2540348
>gb|DQ421814.1| Oryza meridionalis voucher IRGC 101145 shattering (sh4) gene, partial cds Length = 1648 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cggccaccaccaccacccacc 86 ||||||||||||||||||||| Sbjct: 1473 cggccaccaccaccacccacc 1493
>gb|AF460204.1| Coffea canephora phenylalanine ammonia-lyase 2 mRNA, complete cds Length = 2096 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 |||||||||||||| ||||| ||||| |||||| Sbjct: 261 atcaacaccctccttcaggggtactctggcatc 293
>gb|AF460203.1| Coffea canephora phenylalanine ammonia-lyase 1 mRNA, complete cds Length = 2530 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 |||||||||||||| ||||| ||||| |||||| Sbjct: 665 atcaacaccctccttcaggggtactctggcatc 697
>gb|DQ067599.1| Coffea canephora phenylalanine ammonia-lyase (PAL1) gene, complete cds Length = 4415 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 |||||||||||||| ||||| ||||| |||||| Sbjct: 2566 atcaacaccctccttcaggggtactctggcatc 2598
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 cgcggcggcggccgagctcaccggc 164 ||||||||||||||| ||||||||| Sbjct: 4381677 cgcggcggcggccgaactcaccggc 4381701
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 380 cggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 61381 cggcgtcaccaccggctctcgcggcacctcc-accgccgca 61342
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ggcgcggcggcggccgagctc 158 ||||||||||||||||||||| Sbjct: 5581541 ggcgcggcggcggccgagctc 5581561
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ggcgcggcggcggccgagctc 158 ||||||||||||||||||||| Sbjct: 4124282 ggcgcggcggcggccgagctc 4124302
>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664C05 Length = 165354 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ggcgcggcggcggccgagctc 158 ||||||||||||||||||||| Sbjct: 128449 ggcgcggcggcggccgagctc 128469
>dbj|AK110864.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D11, full insert sequence Length = 1972 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 380 cggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 481 cggcgtcaccaccggctctcgcggcacctcc-accgccgca 442
>gb|AF218454.1|AF218454 Coffea arabica clone 430.4 phenylalanine ammonia lyase mRNA, partial cds Length = 560 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 |||||||||||||| ||||| ||||| |||||| Sbjct: 208 atcaacaccctccttcaggggtactctggcatc 240
>gb|AF218453.1|AF218453 Coffea arabica clone 369.1.6r phenylalanine ammonia lyase mRNA, partial cds Length = 651 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 543 atcaacaccctcctccagggctactccggcatc 575 |||||||||||||| ||||| ||||| |||||| Sbjct: 208 atcaacaccctccttcaggggtactctggcatc 240
>dbj|AK105797.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A07, full insert sequence Length = 1745 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 380 cggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 504 cggcgtcaccaccggctctcgcggcacctcc-accgccgca 465
>dbj|AK101125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025M22, full insert sequence Length = 1742 Score = 42.1 bits (21), Expect = 2.0 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 380 cggcgtcaccaccggcttcggcggcacctcccaccgccgca 420 ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 501 cggcgtcaccaccggctctcgcggcacctcc-accgccgca 462
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 tacggcgtcaccaccggcttcggcg 402 ||||||||||||||||| ||||||| Sbjct: 1591674 tacggcgtcaccaccggtttcggcg 1591698
>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129155 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 136 ggggcgcggcggcggccgagctcaccggc 164 |||||||| |||||||||||||| ||||| Sbjct: 83117 ggggcgcgccggcggccgagctcgccggc 83145
>gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin biosynthesis gene cluster, complete sequence Length = 75439 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 gctgccggcggaggtgtccc 522 |||||||||||||||||||| Sbjct: 11927 gctgccggcggaggtgtccc 11946
>gb|AY795080.1| Brassica napus phenylalanine ammonia-lyase (PAL2-2) mRNA, complete cds Length = 2446 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||||||||| || ||||||| |||||||| || |||||||| Sbjct: 618 gccatgctcgtccgagtcaacactctcctccaaggatactccgg 661
>gb|AY795079.1| Brassica napus phenylalanine ammonia-lyase (PAL2-2) gene, complete cds Length = 2742 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||||||||| || ||||||| |||||||| || |||||||| Sbjct: 939 gccatgctcgtccgagtcaacactctcctccaaggatactccgg 982
>gb|AY795078.1| Brassica napus phenylalanine ammonia-lyase (PAL2-1) mRNA, complete cds Length = 2444 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||||||||| || ||||||| |||||||| || |||||||| Sbjct: 613 gccatgctcgtccgagtcaacacactcctccaaggatactccgg 656
>gb|AY795077.1| Brassica napus phenylalanine ammonia-lyase (PAL2-1) gene, complete cds Length = 2735 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 528 gccatgctcgtgcgcatcaacaccctcctccagggctactccgg 571 ||||||||||| || ||||||| |||||||| || |||||||| Sbjct: 926 gccatgctcgtccgagtcaacacactcctccaaggatactccgg 969
>gb|AC115697.19| Mus musculus chromosome 7, clone RP24-233E11, complete sequence Length = 161690 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cgaggaggcgcggccccgcg 324 |||||||||||||||||||| Sbjct: 80315 cgaggaggcgcggccccgcg 80334
>gb|AY724738.1| Taxus canadensis phenylalanine aminomutase (pam) gene, complete cds Length = 2235 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcg 402 |||||| |||||||||||||| ||||| |||| Sbjct: 231 cgacatatacggcgtcaccacgggctttggcg 262
>ref|XM_602703.2| PREDICTED: Bos taurus similar to espin isoform 1 (LOC524380), mRNA Length = 3273 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 aggacgcgtcgggcgtctcc 293 |||||||||||||||||||| Sbjct: 569 aggacgcgtcgggcgtctcc 588
>ref|XM_368399.1| Magnaporthe grisea 70-15 chromosome VI predicted protein (MG00845.4) partial mRNA Length = 3027 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caccaccaccacccaccgag 89 |||||||||||||||||||| Sbjct: 1463 caccaccaccacccaccgag 1482
>gb|AY582743.1| Taxus canadensis phenylalanine aminomutase mRNA, complete cds Length = 2109 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcg 402 |||||| |||||||||||||| ||||| |||| Sbjct: 237 cgacatatacggcgtcaccacgggctttggcg 268
>ref|NM_138693.1| Homo sapiens Kruppel-like factor 14 (KLF14), mRNA Length = 1383 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ggagctcctcaggcatctga 465 |||||||||||||||||||| Sbjct: 1324 ggagctcctcaggcatctga 1305
>ref|NM_199596.1| Danio rerio sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) (sirt2), mRNA Length = 2545 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 tcaccatctcctccggctcttttt 36 |||||||||||||| ||||||||| Sbjct: 1106 tcaccatctcctccagctcttttt 1083
>gb|AC134524.5| Mus musculus BAC clone RP24-496E20 from chromosome Y, complete sequence Length = 157055 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccaccaccaccacccaccgagaaa 92 ||||||||||||||||| |||||| Sbjct: 42522 ccaccaccaccacccacagagaaa 42499
>ref|XM_742594.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g03900) partial mRNA Length = 3309 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gccaccaccaccacccaccg 87 |||||||||||||||||||| Sbjct: 2907 gccaccaccaccacccaccg 2926
>gb|AC009159.12| Homo sapiens chromosome 16 clone RP11-70D24, complete sequence Length = 165921 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gccggccaccaccaccaccc 83 |||||||||||||||||||| Sbjct: 100219 gccggccaccaccaccaccc 100238
>ref|XM_804876.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511557.40) partial mRNA Length = 2298 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ccaccaccaccacccaccga 88 |||||||||||||||||||| Sbjct: 1528 ccaccaccaccacccaccga 1547
>emb|AL591852.10| Human DNA sequence from clone RP11-249H20 on chromosome 9 Contains part of the DAPK1 gene for death-assodeath-associated protein kinase 1, complete sequence Length = 72904 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gagtggatcctcagctgcct 358 |||||||||||||||||||| Sbjct: 53043 gagtggatcctcagctgcct 53024
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 gccaggtggcggccgtggcc 266 |||||||||||||||||||| Sbjct: 4017674 gccaggtggcggccgtggcc 4017655
>ref|XM_778317.1| PREDICTED: Strongylocentrotus purpuratus similar to voltage-gated Calcium Channel Alpha subunit, putative L-type calcium channel alpha 1 subunit, EGg Laying defective EGL-19, EATing: abnormal pharyngeal pumping EAT-12, Paralysed Arrest at Two-fold PAT-5 (202.6 kD) (egl-19) ... (LOC578128), mRNA Length = 6375 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgagtggatcctcagctgcc 357 |||||||||||||||||||| Sbjct: 2653 cgagtggatcctcagctgcc 2634
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gggcgcggcggcggccgagc 156 |||||||||||||||||||| Sbjct: 849364 gggcgcggcggcggccgagc 849383
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 atctacggcgtcaccaccggcttcggcg 402 ||||||||||| |||||||||| ||||| Sbjct: 543247 atctacggcgtgaccaccggctacggcg 543220
>gb|AC151605.2| Emiliania huxleyi clone JGIACCU-13A3, complete sequence Length = 36153 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctggggcgcggcggcggccg 153 |||||||||||||||||||| Sbjct: 26855 ctggggcgcggcggcggccg 26836
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ctacggcgtcaccaccggct 396 |||||||||||||||||||| Sbjct: 2762642 ctacggcgtcaccaccggct 2762623
>gb|AC009274.11| Homo sapiens chromosome 7 clone RP11-254L11, complete sequence Length = 150505 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ggagctcctcaggcatctga 465 |||||||||||||||||||| Sbjct: 112998 ggagctcctcaggcatctga 113017
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 gcggcggcggccgagctcaccggc 164 |||||||||||||||||| ||||| Sbjct: 2000340 gcggcggcggccgagctctccggc 2000317
>dbj|AB030907.1| Hepatitis C virus (isolate JPUT971017) genomic RNA, complete genome Length = 9654 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9329 cgccggcgggggcgacatct 9348
>gb|AF490374.1| Homo sapiens BTEB5 mRNA, complete cds Length = 1383 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ggagctcctcaggcatctga 465 |||||||||||||||||||| Sbjct: 1324 ggagctcctcaggcatctga 1305
>ref|XM_696962.1| PREDICTED: Danio rerio hypothetical protein LOC555061 (LOC555061), mRNA Length = 2026 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 tcaccatctcctccggctcttttt 36 |||||||||||||| ||||||||| Sbjct: 603 tcaccatctcctccagctcttttt 580
>ref|XM_939226.1| PREDICTED: Homo sapiens hypothetical protein LOC650144 (LOC650144), mRNA Length = 1313 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 cggccaccaccaccacccaccgag 89 ||||||||||| |||||||||||| Sbjct: 46 cggccaccaccgccacccaccgag 23
>ref|XM_930528.1| PREDICTED: Homo sapiens hypothetical protein LOC646050 (LOC646050), mRNA Length = 1305 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 cggccaccaccaccacccaccgag 89 ||||||||||| |||||||||||| Sbjct: 38 cggccaccaccgccacccaccgag 15
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 tggtggcgcagttccgcgag 209 |||||||||||||||||||| Sbjct: 1442002 tggtggcgcagttccgcgag 1442021
>ref|NM_005360.3| Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) (MAF), transcript variant 1, mRNA Length = 2161 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gccggccaccaccaccaccc 83 |||||||||||||||||||| Sbjct: 1374 gccggccaccaccaccaccc 1393
>ref|NM_001031804.1| Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) (MAF), transcript variant 2, mRNA Length = 6392 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gccggccaccaccaccaccc 83 |||||||||||||||||||| Sbjct: 1374 gccggccaccaccaccaccc 1393
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ggccccggcgccgatggcca 499 |||||||||||||||||||| Sbjct: 4237902 ggccccggcgccgatggcca 4237921
>gb|BC045510.1| Danio rerio sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae), mRNA (cDNA clone MGC:55966 IMAGE:3819426), complete cds Length = 2545 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 tcaccatctcctccggctcttttt 36 |||||||||||||| ||||||||| Sbjct: 1106 tcaccatctcctccagctcttttt 1083
>gb|BC067165.1| Danio rerio sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae), mRNA (cDNA clone MGC:77003 IMAGE:6805523), complete cds Length = 2600 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 tcaccatctcctccggctcttttt 36 |||||||||||||| ||||||||| Sbjct: 1086 tcaccatctcctccagctcttttt 1063
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 ggccccgcgtcaaggccagcagcg 339 |||||||| ||||||||||||||| Sbjct: 15266061 ggccccgcttcaaggccagcagcg 15266038
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 gagctcgacgaggaggcgcg 316 |||||||||||||||||||| Sbjct: 24572255 gagctcgacgaggaggcgcg 24572274
>gb|AY232749.1| Hepatitis C virus clone MD2b10-2 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232748.1| Hepatitis C virus clone MD2b10-1 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232747.1| Hepatitis C virus clone MD2b9-2 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232746.1| Hepatitis C virus clone MD2b9-1 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232741.1| Hepatitis C virus clone MD2b6-2 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232740.1| Hepatitis C virus clone MD2b6-1 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232739.1| Hepatitis C virus clone MD2b5-2 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232738.1| Hepatitis C virus clone MD2b5-1 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232733.1| Hepatitis C virus clone MD2b2-2 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AY232732.1| Hepatitis C virus clone MD2b2-1 polyprotein mRNA, complete cds Length = 9406 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AC018463.11| Homo sapiens BAC clone RP11-295J19 from 2, complete sequence Length = 183995 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 cggccaccaccaccacccaccgag 89 ||||||||||| |||||||||||| Sbjct: 156995 cggccaccaccgccacccaccgag 156972
>gb|AE004462.1| Pseudomonas aeruginosa PAO1, section 23 of 529 of the complete genome Length = 9953 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gccgtggcccaggccaagga 277 |||||||||||||||||||| Sbjct: 5805 gccgtggcccaggccaagga 5824
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tggtgaagatcgagggcgcc 233 |||||||||||||||||||| Sbjct: 2671306 tggtgaagatcgagggcgcc 2671325
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 gagctcgacgaggaggcgcg 316 |||||||||||||||||||| Sbjct: 152639 gagctcgacgaggaggcgcg 152658
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 ggccccgcgtcaaggccagcagcg 339 |||||||| ||||||||||||||| Sbjct: 160037 ggccccgcttcaaggccagcagcg 160014
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 ggccccgcgtcaaggccagcagcg 339 |||||||| ||||||||||||||| Sbjct: 45250 ggccccgcttcaaggccagcagcg 45227
>gb|AE005171.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 32 of 32 of the complete genome Length = 13745 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 acggcgtcaccaccggcttcggcg 402 ||||||||||||||||| |||||| Sbjct: 900 acggcgtcaccaccggcgtcggcg 923
>gb|AF238486.1|AF238486 Hepatitis C virus 2b polyprotein gene, complete cds Length = 9416 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 9292 cgccggcgggggcgacatct 9311
>gb|AE005144.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 5 of 32 of the complete genome Length = 10846 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 acggcgtcaccaccggcttcggcg 402 ||||||||||||||||| |||||| Sbjct: 166 acggcgtcaccaccggcgtcggcg 143
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 atctacggcgtcaccaccggcttcggcg 402 ||||||||||| |||||||||| ||||| Sbjct: 372609 atctacggcgtgaccaccggctacggcg 372582
>dbj|AK064632.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-H01, full insert sequence Length = 1134 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 gagctcgacgaggaggcgcg 316 |||||||||||||||||||| Sbjct: 716 gagctcgacgaggaggcgcg 697
>gb|AY866411.1| Taxus x media phenylalanine aminomutase mRNA, complete cds Length = 2064 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 371 cgacatctacggcgtcaccaccggcttcggcg 402 |||||| |||||||||||||| ||||| |||| Sbjct: 231 cgacatatacggcgtcaccacgggctttggcg 262
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 tacggcgtcaccaccggcttcggc 401 |||||||| ||||||||||||||| Sbjct: 359004 tacggcgtgaccaccggcttcggc 358981
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aggtgaagcggatggtggcg 197 |||||||||||||||||||| Sbjct: 404379 aggtgaagcggatggtggcg 404398
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cctccgcgtcggccaggtgg 255 |||||||||||||||||||| Sbjct: 2159276 cctccgcgtcggccaggtgg 2159295
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cggccaccaccaccacccac 85 |||||||||||||||||||| Sbjct: 10731 cggccaccaccaccacccac 10750
>gb|AF055377.1|AF055377 Homo sapiens long form transcription factor C-MAF (c-maf) mRNA, complete cds Length = 2145 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gccggccaccaccaccaccc 83 |||||||||||||||||||| Sbjct: 1372 gccggccaccaccaccaccc 1391
>gb|AF055376.1|AF055376 Homo sapiens short form transcription factor C-MAF (c-maf) mRNA, complete cds Length = 4246 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gccggccaccaccaccaccc 83 |||||||||||||||||||| Sbjct: 1372 gccggccaccaccaccaccc 1391
>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128795 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cggccaccaccaccacccac 85 |||||||||||||||||||| Sbjct: 59942 cggccaccaccaccacccac 59961
>gb|AC003101.1|AC003101 Homo sapiens chromosome 17, clone HRPC41C23, complete sequence Length = 208396 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ggcgcggcggcggccgagctcacc 161 |||||||||| ||||||||||||| Sbjct: 140390 ggcgcggcgggggccgagctcacc 140367
>gb|BC081542.1| Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian), transcript variant 2, mRNA (cDNA clone MGC:71685 IMAGE:30347784), complete cds Length = 5699 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gccggccaccaccaccaccc 83 |||||||||||||||||||| Sbjct: 680 gccggccaccaccaccaccc 699
>gb|AC170870.2| Mus musculus BAC clone RP24-303O21 from chromosome y, complete sequence Length = 169086 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccaccaccaccacccaccgagaaa 92 ||||||||||||||||| |||||| Sbjct: 118404 ccaccaccaccacccacagagaaa 118381
>emb|AL772249.6| Mouse DNA sequence from clone RP23-430H1 on chromosome 2, complete sequence Length = 204907 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccggccaccaccaccaccca 84 |||||||||||||||||||| Sbjct: 177047 ccggccaccaccaccaccca 177066
>gb|AF016485.1| Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 acggcgtcaccaccggcttcggcg 402 ||||||||||||||||| |||||| Sbjct: 178501 acggcgtcaccaccggcgtcggcg 178524 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 acggcgtcaccaccggcttcggcg 402 ||||||||||||||||| |||||| Sbjct: 44888 acggcgtcaccaccggcgtcggcg 44865
>dbj|D00828.1|HPCNS5J7 Hepatitis C virus gene for NS5 protein, partial cds, isolate:HC-J7 Length = 1227 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cgccggcgggggcgacatct 378 |||||||||||||||||||| Sbjct: 985 cgccggcgggggcgacatct 1004 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,898,713 Number of Sequences: 3902068 Number of extensions: 4898713 Number of successful extensions: 240529 Number of sequences better than 10.0: 178 Number of HSP's better than 10.0 without gapping: 177 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 234470 Number of HSP's gapped (non-prelim): 6042 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)