>RTN2_MOUSE (O70622) Reticulon-2 (Neuroendocrine-specific protein-like 1)|
           (NSP-like protein 1) (NSPLI)
          Length = 471

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
 Frame = +3

Query: 309 ADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLA---TLFLWSNVCIF 479
           ADL+ W++ + SG V  G  A  L   ++ + ++++  H  +L L    +L ++  V   
Sbjct: 273 ADLLYWKDTRTSGAVFTGLMASLLC--LLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 330

Query: 480 IHKSPPNIP-EVKIPEDLTV 536
           +H+     P +  +  DLT+
Sbjct: 331 VHRGDGTNPFQAYLDMDLTL 350

>PK1L1_MOUSE (Q8R526) Polycystic kidney disease 1-like 1 protein|
           (Polycystin-1L1) (Fragment)
          Length = 531

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -2

Query: 395 HDLEQQPDGRSASEHPSGDLLVPP*NKISRLAAAEDGV 282
           HD   +PD R  S HP+ DLL P  ++  R+AA+   V
Sbjct: 320 HDSSGRPDSRHPSPHPTSDLL-PWTDQAWRIAASSSAV 356

>RTN2_HUMAN (O75298) Reticulon-2 (Neuroendocrine-specific protein-like 1)|
           (NSP-like protein 1) (NSPLI)
          Length = 545

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +3

Query: 297 GGKPADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVGHCLILSLA---TLFLWSN 467
           G K ADL+ W++ + SG V  G     L   ++ + ++++  H  +L L    +L ++  
Sbjct: 342 GSKVADLLYWKDTRTSGVVFTGLMVSLLC--LLHFSIVSVAAHLALLLLCGTISLRVYRK 399

Query: 468 VCIFIHKSPPNIP-EVKIPEDLTV 536
           V   +H+     P +  +  DLT+
Sbjct: 400 VLQAVHRGDGANPFQAYLDVDLTL 423

>E434_ADEM1 (P23125) Probable early E4 33 kDa protein (ORF A/B protein)|
          Length = 289

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 417 VGHCLILSLATLFLWSNVCIFIHKSPPNIPEVKIPEDLTVNIALSLRH 560
           V HC+ L   TL  W N+ +    S P IP   IP + T  +   + H
Sbjct: 225 VDHCMRLLSFTLRRWQNLLLGRSGSSPLIPGFDIPRNRTERLRQRMLH 272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,009,462
Number of Sequences: 219361
Number of extensions: 800440
Number of successful extensions: 2900
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2898
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)