ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart26b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ023305.1| Aegilops tauschii beta1 proteasome-7D mRNA, complete cds Length = 1029 Score = 735 bits (371), Expect = 0.0 Identities = 489/527 (92%), Gaps = 6/527 (1%) Strand = Plus / Plus Query: 51 ccgccatggacgccgcctc---gctcatgggc---ccctcctctgccgacgcgcccaccg 104 ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 83 ccgccatggacgccgcctcctcgctcatgggcggcccctcctccgccgacgcgcccaccg 142 Query: 105 acggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcc 164 |||| |||||||| |||||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 143 acggcgagcaccgcatgggcaccaccatcgtcggggtctgctacgccggcggcgtcgtcc 202 Query: 165 tcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaaga 224 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 203 tcgccgccgactccaggaccagcaccggaatgtatgtggcaaaccgtgcttcggacaaga 262 Query: 225 ttagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaa 284 ||||||| || |||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 263 ttagtcagctcactgataatgtctatgtctgccgttctggatctgctgctgatacacaag 322 Query: 285 ttatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccag 344 ||||||| |||||||| || |||||||||||||| |||||||| |||||||||||||||| Sbjct: 323 ttatttcagattatgtgcgctattttctccaccaacacacaattcagcttgggcaaccag 382 Query: 345 ctaccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgt 404 ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 383 ctaccgtgaaagtcgcatccaacttggttaggttgctggcctatcagaacaagagcatgt 442 Query: 405 tgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctg 464 | ||||||||||||||||||||||||||||| || || |||||||||||||||||||| | Sbjct: 443 tacaagctggaatgatagttggtggatgggataagtatgagggaggccaaatttactcag 502 Query: 465 tccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtt 524 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 503 tccctcttggtggaacgattctgaggcaaccattcgcaattggaggatctggttccagct 562 Query: 525 acctgtatggattgatggatcatgagtggaaagagggtatgacccag 571 | ||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 563 atctgtatggattgatggatcatgaatggaaagaggggatgacccag 609
>dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C07, full insert sequence Length = 999 Score = 613 bits (309), Expect = e-172 Identities = 438/481 (91%) Strand = Plus / Plus Query: 91 cgacgcgcccaccgacggggagcaccggatgggcacaaccatcgtcggcgtctgctacga 150 |||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 154 cgacgcccccacctccggggagcaccggatggggaccaccatcgtcggcgtctgctacga 213 Query: 151 cggcggcgtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccg 210 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 214 cggcggcgtcgtcctcgccgccgactcccggaccagcaccggaatgtatgtggcgaaccg 273 Query: 211 tgcttcggacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgc 270 ||| || ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 274 tgcatctgacaaaattactcaactgactgacaatgtgtacgtctgccgctctggatctgc 333 Query: 271 tgctgacacacaaattatttcggattatgtacgttattttctccaccagcacacaatcca 330 ||| ||||||||| | |||||||| |||||||| |||||||||||||| |||||||| || Sbjct: 334 tgccgacacacaagtcatttcggaatatgtacgctattttctccaccaacacacaattca 393 Query: 331 gcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggcctatca 390 |||||||||||||||||| |||||||||||| |||||||| ||||||| ||||| ||||| Sbjct: 394 gcttgggcaaccagctactgtgaaagttgcagccaacttaattaggttgttggcttatca 453 Query: 391 gaacaagagcatgttgcaagctggaatgatagttggtggatgggacaaatacgagggagg 450 |||||||| ||||||||||||||| ||||| |||||||||||||| ||||| ||||| || Sbjct: 454 gaacaagaacatgttgcaagctggcatgattgttggtggatgggataaatatgagggtgg 513 Query: 451 ccaaatttactctgtccctcttggtggaacgattctgaggcaaccatttgcaattggagg 510 |||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 514 ccaaattttctcagtcccccttggtggaacaattctgaggcaaccatttgcaattggagg 573 Query: 511 atctggttccagttacctgtatggattgatggatcatgagtggaaagagggtatgaccca 570 |||||||||||||||||||||||| || | || ||||| ||||| ||||| ||| |||| Sbjct: 574 ttctggttccagttacctgtatggactgcttgaccatgaatggaaggagggcatgtccca 633 Query: 571 g 571 | Sbjct: 634 g 634
>ref|XM_507536.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1079_F11.26 mRNA Length = 1070 Score = 551 bits (278), Expect = e-154 Identities = 419/466 (89%) Strand = Plus / Plus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 208 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 267 Query: 166 cgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 225 ||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 268 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 327 Query: 226 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 285 || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| | Sbjct: 328 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 387 Query: 286 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 345 ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 388 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 447 Query: 346 taccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgtt 405 |||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| |||||| Sbjct: 448 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 507 Query: 406 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctgt 465 ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 508 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattttctcagt 567 Query: 466 ccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtta 525 ||| ||||||||||| ||||||||||||||||||||||| ||||| || || || ||||| Sbjct: 568 cccccttggtggaacaattctgaggcaaccatttgcaatcggaggttcaggctctagtta 627 Query: 526 cctgtatggattgatggatcatgagtggaaagagggtatgacccag 571 ||| ||||||||| | || || || ||||| ||||| ||| ||||| Sbjct: 628 cctctatggattgcttgaccacgaatggaaggagggcatgtcccag 673
>ref|XM_468000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1040 Score = 551 bits (278), Expect = e-154 Identities = 419/466 (89%) Strand = Plus / Plus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 172 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 231 Query: 166 cgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 225 ||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 232 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 291 Query: 226 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 285 || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| | Sbjct: 292 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 351 Query: 286 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 345 ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 352 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 411 Query: 346 taccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgtt 405 |||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| |||||| Sbjct: 412 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 471 Query: 406 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctgt 465 ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 472 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattttctcagt 531 Query: 466 ccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtta 525 ||| ||||||||||| ||||||||||||||||||||||| ||||| || || || ||||| Sbjct: 532 cccccttggtggaacaattctgaggcaaccatttgcaatcggaggttcaggctctagtta 591 Query: 526 cctgtatggattgatggatcatgagtggaaagagggtatgacccag 571 ||| ||||||||| | || || || ||||| ||||| ||| ||||| Sbjct: 592 cctctatggattgcttgaccacgaatggaaggagggcatgtcccag 637
>ref|XM_506995.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1079_F11.26 mRNA Length = 1085 Score = 551 bits (278), Expect = e-154 Identities = 419/466 (89%) Strand = Plus / Plus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 160 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 219 Query: 166 cgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 225 ||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 220 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 279 Query: 226 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 285 || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| | Sbjct: 280 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 339 Query: 286 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 345 ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 340 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 399 Query: 346 taccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgtt 405 |||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| |||||| Sbjct: 400 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 459 Query: 406 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctgt 465 ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 460 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattttctcagt 519 Query: 466 ccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtta 525 ||| ||||||||||| ||||||||||||||||||||||| ||||| || || || ||||| Sbjct: 520 cccccttggtggaacaattctgaggcaaccatttgcaatcggaggttcaggctctagtta 579 Query: 526 cctgtatggattgatggatcatgagtggaaagagggtatgacccag 571 ||| ||||||||| | || || || ||||| ||||| ||| ||||| Sbjct: 580 cctctatggattgcttgaccacgaatggaaggagggcatgtcccag 625
>dbj|AK104505.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F11, full insert sequence Length = 1040 Score = 551 bits (278), Expect = e-154 Identities = 419/466 (89%) Strand = Plus / Plus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 172 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 231 Query: 166 cgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 225 ||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 232 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 291 Query: 226 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 285 || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| | Sbjct: 292 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 351 Query: 286 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 345 ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 352 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 411 Query: 346 taccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgtt 405 |||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| |||||| Sbjct: 412 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 471 Query: 406 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctgt 465 ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 472 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattttctcagt 531 Query: 466 ccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtta 525 ||| ||||||||||| ||||||||||||||||||||||| ||||| || || || ||||| Sbjct: 532 cccccttggtggaacaattctgaggcaaccatttgcaatcggaggttcaggctctagtta 591 Query: 526 cctgtatggattgatggatcatgagtggaaagagggtatgacccag 571 ||| ||||||||| | || || || ||||| ||||| ||| ||||| Sbjct: 592 cctctatggattgcttgaccacgaatggaaggagggcatgtcccag 637
>dbj|AK103425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K18, full insert sequence Length = 1084 Score = 551 bits (278), Expect = e-154 Identities = 419/466 (89%) Strand = Plus / Plus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 160 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 219 Query: 166 cgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 225 ||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 220 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 279 Query: 226 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 285 || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| | Sbjct: 280 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 339 Query: 286 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 345 ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 340 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 399 Query: 346 taccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgtt 405 |||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| |||||| Sbjct: 400 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 459 Query: 406 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctgt 465 ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 460 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattttctcagt 519 Query: 466 ccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtta 525 ||| ||||||||||| ||||||||||||||||||||||| ||||| || || || ||||| Sbjct: 520 cccccttggtggaacaattctgaggcaaccatttgcaatcggaggttcaggctctagtta 579 Query: 526 cctgtatggattgatggatcatgagtggaaagagggtatgacccag 571 ||| ||||||||| | || || || ||||| ||||| ||| ||||| Sbjct: 580 cctctatggattgcttgaccacgaatggaaggagggcatgtcccag 625
>dbj|AK059837.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C07, full insert sequence Length = 1070 Score = 551 bits (278), Expect = e-154 Identities = 419/466 (89%) Strand = Plus / Plus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 208 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 267 Query: 166 cgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 225 ||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 268 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 327 Query: 226 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 285 || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| | Sbjct: 328 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 387 Query: 286 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 345 ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 388 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 447 Query: 346 taccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgtt 405 |||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| |||||| Sbjct: 448 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 507 Query: 406 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctgt 465 ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 508 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattttctcagt 567 Query: 466 ccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtta 525 ||| ||||||||||| ||||||||||||||||||||||| ||||| || || || ||||| Sbjct: 568 cccccttggtggaacaattctgaggcaaccatttgcaatcggaggttcaggctctagtta 627 Query: 526 cctgtatggattgatggatcatgagtggaaagagggtatgacccag 571 ||| ||||||||| | || || || ||||| ||||| ||| ||||| Sbjct: 628 cctctatggattgcttgaccacgaatggaaggagggcatgtcccag 673
>dbj|AB026563.1| Oryza sativa (japonica cultivar-group) OsPBA1 mRNA for beta 1 subunit of 20S proteasome, complete cds Length = 1068 Score = 551 bits (278), Expect = e-154 Identities = 419/466 (89%) Strand = Plus / Plus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 191 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 250 Query: 166 cgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 225 ||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 251 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 310 Query: 226 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 285 || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| | Sbjct: 311 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 370 Query: 286 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 345 ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 371 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 430 Query: 346 taccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgtt 405 |||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| |||||| Sbjct: 431 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 490 Query: 406 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctgt 465 ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| ||| || Sbjct: 491 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattttctcagt 550 Query: 466 ccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtta 525 ||| ||||||||||| ||||||||||||||||||||||| ||||| || || || ||||| Sbjct: 551 cccccttggtggaacaattctgaggcaaccatttgcaatcggaggttcaggctctagtta 610 Query: 526 cctgtatggattgatggatcatgagtggaaagagggtatgacccag 571 ||| ||||||||| | || || || ||||| ||||| ||| ||||| Sbjct: 611 cctctatggattgcttgaccacgaatggaaggagggcatgtcccag 656
>gb|AY103685.1| Zea mays PCO069906 mRNA sequence Length = 1201 Score = 486 bits (245), Expect = e-134 Identities = 407/461 (88%) Strand = Plus / Plus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||| Sbjct: 241 cggggagcaccggatggggactaccatcgtcggggtctgctacgagggcggcgtcgtcct 300 Query: 166 cgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 225 | |||||| |||||||||||||| ||||||||||| || ||||||||||| |||||||| Sbjct: 301 gggcgccgattccaggaccagcactggaatgtatgtagccaaccgtgcttcagacaagat 360 Query: 226 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 285 || ||||||||| || ||||| || ||||| |||||||||||||||||||| |||||| | Sbjct: 361 tactcaactgacagacaatgtgtatgtctgtcgctctggatctgctgctgatacacaagt 420 Query: 286 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 345 ||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 421 catttcggattatgtacgctatttcctccaccaacacacaatccagcttggacaaccagc 480 Query: 346 taccgtgaaagttgcatccaacttagttaggttattggcctatcagaacaagagcatgtt 405 |||||| ||||||||| ||||||| ||||||| | || ||||||||||||| |||||| Sbjct: 481 taccgttaaagttgcagccaacttgattaggttgctagcttatcagaacaagaacatgtt 540 Query: 406 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactctgt 465 ||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||| ||| || Sbjct: 541 gcaagctggcatgattgttggaggatgggacaagtacgagggaggccaaattttctcagt 600 Query: 466 ccctcttggtggaacgattctgaggcaaccatttgcaattggaggatctggttccagtta 525 |||||| ||||||||||| ||| ||||||||||||||||||||| || ||||||||||| Sbjct: 601 ccctctcggtggaacgatcttgaagcaaccatttgcaattggaggttcaggttccagtta 660 Query: 526 cctgtatggattgatggatcatgagtggaaagagggtatga 566 ||| |||| | | |||||||| ||||||||||| |||| Sbjct: 661 cctatatgctcttcttgatcatgaatggaaagagggaatga 701
>gb|DQ023303.1| Aegilops tauschii beta1 proteasome-1D gene, complete cds Length = 4452 Score = 226 bits (114), Expect = 6e-56 Identities = 135/142 (95%) Strand = Plus / Plus Query: 51 ccgccatggacgccgcctcgctcatgggcccctcctctgccgacgcgcccaccgacgggg 110 ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| Sbjct: 792 ccgccatggacgccgcctcgctcatgggcccctcctccgccgacgccgcccccgacgggg 851 Query: 111 agcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcctcgccg 170 |||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 852 agcaccggatgggcaccaccatcgtgggcgtctgctacgacggcggcgtcgtgctcgccg 911 Query: 171 ccgactccaggaccagcaccgg 192 |||||||||||||||||||||| Sbjct: 912 ccgactccaggaccagcaccgg 933 Score = 196 bits (99), Expect = 6e-47 Identities = 111/115 (96%) Strand = Plus / Plus Query: 396 agagcatgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaa 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2404 agagcatgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaa 2463 Query: 456 tttactctgtccctcttggtggaacgattctgaggcaaccatttgcaattggagg 510 ||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 2464 tttactcggtccctcttggtggtacgattctgaggcagccattcgcaattggagg 2518 Score = 145 bits (73), Expect = 2e-31 Identities = 73/73 (100%) Strand = Plus / Plus Query: 325 aatccagcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggc 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2229 aatccagcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggc 2288 Query: 385 ctatcagaacaag 397 ||||||||||||| Sbjct: 2289 ctatcagaacaag 2301 Score = 141 bits (71), Expect = 3e-30 Identities = 77/79 (97%) Strand = Plus / Plus Query: 191 ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 250 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1471 ggaatgtatgtggcaaaccgtgcttcggacaagattagtcagctgactgataatgtctac 1530 Query: 251 gtctgccgctctggatctg 269 ||||||||||||||||||| Sbjct: 1531 gtctgccgctctggatctg 1549 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 508 aggatctggttccagttacctgtatggattgatggatcatgagtggaaagagggtatgac 567 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 2825 aggatctggttccagttacctttatggattgatggatcatgaatggaaagagggtatgac 2884 Query: 568 ccag 571 |||| Sbjct: 2885 ccag 2888 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 269 gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 324 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 2012 gctgctgacacacaagttatttcggattatgttcgttattttctccaccagcacac 2067
>gb|DQ023304.1| Aegilops tauschii beta1 proteasome-7D gene, complete cds Length = 6037 Score = 190 bits (96), Expect = 3e-45 Identities = 136/148 (91%), Gaps = 6/148 (4%) Strand = Plus / Plus Query: 51 ccgccatggacgccgcctc---gctcatgggc---ccctcctctgccgacgcgcccaccg 104 ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 1326 ccgccatggacgccgcctcctcgctcatgggcggcccctcctccgccgacgcgcccaccg 1385 Query: 105 acggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcc 164 |||| |||||||| |||||||| ||||||||||| |||||||||| |||||||||||||| Sbjct: 1386 acggcgagcaccgcatgggcaccaccatcgtcggggtctgctacgccggcggcgtcgtcc 1445 Query: 165 tcgccgccgactccaggaccagcaccgg 192 |||||||||||||||||||||||||||| Sbjct: 1446 tcgccgccgactccaggaccagcaccgg 1473 Score = 180 bits (91), Expect = 3e-42 Identities = 109/115 (94%) Strand = Plus / Plus Query: 396 agagcatgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaa 455 |||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 3611 agagcatgttacaagctggaatgatagttggtggatgggataagtatgagggaggccaaa 3670 Query: 456 tttactctgtccctcttggtggaacgattctgaggcaaccatttgcaattggagg 510 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3671 tttactcagtccctcttggtggaacgattctgaggcaaccattcgcaattggagg 3725 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 191 ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 250 |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| Sbjct: 2762 ggaatgtatgtggcaaaccgtgcttcggacaagattagtcagctcactgataatgtctat 2821 Query: 251 gtctgccgctctggatctg 269 |||||||| |||||||||| Sbjct: 2822 gtctgccgttctggatctg 2840 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 329 cagcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggcctat 388 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 3462 cagcttgggcaaccagctaccgtgaaagtcgcatccaacttggttaggttgctggcctat 3521 Query: 389 cagaacaag 397 ||||||||| Sbjct: 3522 cagaacaag 3530 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 508 aggatctggttccagttacctgtatggattgatggatcatgagtggaaagagggtatgac 567 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 3977 aggatctggttccagctatctgtatggattgatggatcatgaatggaaagaggggatgac 4036 Query: 568 ccag 571 |||| Sbjct: 4037 ccag 4040 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 269 gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 324 |||||||| |||||| ||||||| |||||||| || |||||||||||||| ||||| Sbjct: 3241 gctgctgatacacaagttatttcagattatgtgcgctattttctccaccaacacac 3296
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 155 bits (78), Expect = 2e-34 Identities = 96/102 (94%) Strand = Plus / Minus Query: 91 cgacgcgcccaccgacggggagcaccggatgggcacaaccatcgtcggcgtctgctacga 150 |||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 2093484 cgacgcccccacctccggggagcaccggatggggaccaccatcgtcggcgtctgctacga 2093425 Query: 151 cggcggcgtcgtcctcgccgccgactccaggaccagcaccgg 192 |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2093424 cggcggcgtcgtcctcgccgccgactcccggaccagcaccgg 2093383 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 400 catgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattta 459 ||||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct: 2091901 catgttgcaagctggcatgattgttggtggatgggataaatatgagggtggccaaatttt 2091842 Query: 460 ctctgtccctcttggtggaacgattctgaggcaaccatttgcaattggagg 510 ||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2091841 ctcagtcccccttggtggaacaattctgaggcaaccatttgcaattggagg 2091791 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 191 ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 250 ||||||||||||||||||||||| || ||||| |||| |||||||||||| ||||| ||| Sbjct: 2092756 ggaatgtatgtggcgaaccgtgcatctgacaaaattactcaactgactgacaatgtgtac 2092697 Query: 251 gtctgccgctctggatctg 269 ||||||||||||||||||| Sbjct: 2092696 gtctgccgctctggatctg 2092678 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 329 cagcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggcctat 388 |||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||| ||| Sbjct: 2092104 cagcttgggcaaccagctactgtgaaagttgcagccaacttaattaggttgttggcttat 2092045 Query: 389 cagaacaag 397 ||||||||| Sbjct: 2092044 cagaacaag 2092036 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 269 gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 324 ||||| ||||||||| | |||||||| |||||||| |||||||||||||| ||||| Sbjct: 2092346 gctgccgacacacaagtcatttcggaatatgtacgctattttctccaccaacacac 2092291 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 503 attggaggatctggttccagttacctgtatggattgatggatcatgagtggaaagagggt 562 |||| ||| |||||||||||||||||||||||| || | || ||||| ||||| ||||| Sbjct: 2091414 attgcaggttctggttccagttacctgtatggactgcttgaccatgaatggaaggagggc 2091355 Query: 563 atgacccag 571 ||| ||||| Sbjct: 2091354 atgtcccag 2091346
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 155 bits (78), Expect = 2e-34 Identities = 96/102 (94%) Strand = Plus / Minus Query: 91 cgacgcgcccaccgacggggagcaccggatgggcacaaccatcgtcggcgtctgctacga 150 |||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 114346 cgacgcccccacctccggggagcaccggatggggaccaccatcgtcggcgtctgctacga 114287 Query: 151 cggcggcgtcgtcctcgccgccgactccaggaccagcaccgg 192 |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 114286 cggcggcgtcgtcctcgccgccgactcccggaccagcaccgg 114245 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 400 catgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattta 459 ||||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct: 112763 catgttgcaagctggcatgattgttggtggatgggataaatatgagggtggccaaatttt 112704 Query: 460 ctctgtccctcttggtggaacgattctgaggcaaccatttgcaattggagg 510 ||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112703 ctcagtcccccttggtggaacaattctgaggcaaccatttgcaattggagg 112653 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 191 ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 250 ||||||||||||||||||||||| || ||||| |||| |||||||||||| ||||| ||| Sbjct: 113618 ggaatgtatgtggcgaaccgtgcatctgacaaaattactcaactgactgacaatgtgtac 113559 Query: 251 gtctgccgctctggatctg 269 ||||||||||||||||||| Sbjct: 113558 gtctgccgctctggatctg 113540 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 329 cagcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggcctat 388 |||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||| ||| Sbjct: 112966 cagcttgggcaaccagctactgtgaaagttgcagccaacttaattaggttgttggcttat 112907 Query: 389 cagaacaag 397 ||||||||| Sbjct: 112906 cagaacaag 112898 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 269 gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 324 ||||| ||||||||| | |||||||| |||||||| |||||||||||||| ||||| Sbjct: 113208 gctgccgacacacaagtcatttcggaatatgtacgctattttctccaccaacacac 113153 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 503 attggaggatctggttccagttacctgtatggattgatggatcatgagtggaaagagggt 562 |||| ||| |||||||||||||||||||||||| || | || ||||| ||||| ||||| Sbjct: 112276 attgcaggttctggttccagttacctgtatggactgcttgaccatgaatggaaggagggc 112217 Query: 563 atgacccag 571 ||| ||||| Sbjct: 112216 atgtcccag 112208
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 400 catgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattta 459 ||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 32485289 catgttgcaagctggcatgattgttggtggatgggataaatatgagggaggccaaatttt 32485230 Query: 460 ctctgtccctcttggtggaacgattctgaggcaaccatttgcaattggagg 510 ||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 32485229 ctcagtcccccttggtggaacaattctgaggcaaccatttgcaatcggagg 32485179 Score = 141 bits (71), Expect = 3e-30 Identities = 83/87 (95%) Strand = Plus / Minus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 32486884 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 32486825 Query: 166 cgccgccgactccaggaccagcaccgg 192 ||||||||| ||||| ||||||||||| Sbjct: 32486824 cgccgccgattccagaaccagcaccgg 32486798 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 329 cagcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggcctat 388 ||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||| ||| Sbjct: 32485544 cagcttgggcagccagctaccgtgaaagttgcagccaacttaattaggttgttggcttat 32485485 Query: 389 cagaacaag 397 ||||||||| Sbjct: 32485484 cagaacaag 32485476 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 191 ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 250 |||||||||||||| |||||||| ||||||||||||| ||| || ||||| ||||| ||| Sbjct: 32486123 ggaatgtatgtggcaaaccgtgcgtcggacaagattactcagctaactgacaatgtgtac 32486064 Query: 251 gtctgccgctctggatctg 269 |||||||||||||||||| Sbjct: 32486063 atctgccgctctggatctg 32486045 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 269 gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 324 |||||||| |||||| | ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 32485729 gctgctgatacacaagtaatttccgattatgtacgctattttctccaccaacacac 32485674 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggcggcgtcgtcctcgccg 170 |||||||||||||||||||| Sbjct: 9105826 cggcggcgtcgtcctcgccg 9105807
>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1079_F11 Length = 122402 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 400 catgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattta 459 ||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 88682 catgttgcaagctggcatgattgttggtggatgggataaatatgagggaggccaaatttt 88623 Query: 460 ctctgtccctcttggtggaacgattctgaggcaaccatttgcaattggagg 510 ||| ||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 88622 ctcagtcccccttggtggaacaattctgaggcaaccatttgcaatcggagg 88572 Score = 141 bits (71), Expect = 3e-30 Identities = 83/87 (95%) Strand = Plus / Minus Query: 106 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 165 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 90277 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 90218 Query: 166 cgccgccgactccaggaccagcaccgg 192 ||||||||| ||||| ||||||||||| Sbjct: 90217 cgccgccgattccagaaccagcaccgg 90191 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 329 cagcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggcctat 388 ||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||| ||| Sbjct: 88937 cagcttgggcagccagctaccgtgaaagttgcagccaacttaattaggttgttggcttat 88878 Query: 389 cagaacaag 397 ||||||||| Sbjct: 88877 cagaacaag 88869 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 191 ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 250 |||||||||||||| |||||||| ||||||||||||| ||| || ||||| ||||| ||| Sbjct: 89516 ggaatgtatgtggcaaaccgtgcgtcggacaagattactcagctaactgacaatgtgtac 89457 Query: 251 gtctgccgctctggatctg 269 |||||||||||||||||| Sbjct: 89456 atctgccgctctggatctg 89438 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 269 gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 324 |||||||| |||||| | ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 89122 gctgctgatacacaagtaatttccgattatgtacgctattttctccaccaacacac 89067
>emb|Y09505.1|NTY09505 N.tabacum mRNA for delta proteasome subunit Length = 978 Score = 119 bits (60), Expect = 1e-23 Identities = 153/184 (83%) Strand = Plus / Plus Query: 150 acggcggcgtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaacc 209 |||||||||| || |||| |||||| || | |||||||||||||||||||||||||| Sbjct: 109 acggcggcgttgtactcggcgccgattctcgcaccagcaccggaatgtatgtggcgaata 168 Query: 210 gtgcttcggacaagattagtcaactgactgataatgtctacgtctgccgctctggatctg 269 | |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||||| | Sbjct: 169 gggcttcggataagattactcagctgactgataatgtctacgtttgccgctccggatcag 228 Query: 270 ctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacacaatcc 329 | || || | |||||| |||| || ||||| ||||| || || ||||| ||||| || | Sbjct: 229 cagcagattcccaaattgtttcagactatgttcgttacttcctacaccaacacacgatac 288 Query: 330 agct 333 |||| Sbjct: 289 agct 292
>ref|NM_119279.3| Arabidopsis thaliana PBA1; endopeptidase/ peptidase/ threonine endopeptidase AT4G31300 (PBA1) transcript variant AT4G31300.1 mRNA, complete cds Length = 1045 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 234 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 293 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 294 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 352
>ref|NM_001036682.1| Arabidopsis thaliana PBA1; endopeptidase/ peptidase/ threonine endopeptidase AT4G31300 (PBA1) transcript variant AT4G31300.2 mRNA, complete cds Length = 1087 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 234 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 293 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 294 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 352
>emb|Y13694.1|ATY13694 Arabidopsis thaliana mRNA for proteasome subunit prcd Length = 946 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 141 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 200 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 201 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 259
>gb|AY058240.1| Arabidopsis thaliana AT4g31300/F8F16_120 mRNA, complete cds Length = 702 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 70 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 129 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 130 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 188
>gb|AY052354.1| Arabidopsis thaliana AT4g31300/F8F16_120 mRNA, complete cds Length = 1019 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 234 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 293 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 294 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 352
>emb|BX829148.1|CNS0A2OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZG07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 141 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 200 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 201 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 259
>emb|BX828596.1|CNS0A2KF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 924 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 121 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 180 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 181 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 239
>emb|BX841557.1|CNS09YGA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH42ZF01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 841 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 138 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 197 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 198 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 256
>emb|BX841537.1|CNS09YG8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS52ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 887 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 84 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 143 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 144 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 202
>gb|AY086241.1| Arabidopsis thaliana clone 229 mRNA, complete sequence Length = 963 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 152 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 211 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 212 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 270
>gb|AF043529.1|AF043529 Arabidopsis thaliana 20S proteasome subunit PBA1 (PBA1) mRNA, complete cds Length = 1035 Score = 109 bits (55), Expect = 1e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 158 gtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggcgaaccgtgcttcg 217 |||||||||| |||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct: 222 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 281 Query: 218 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 276 || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 282 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 340
>gb|AY518884.1| Brassica napus putative proteasome 20S beta1 subunit mRNA, partial cds Length = 526 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 182 accagcaccggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgat 241 ||||||||||| |||||||| ||||| || ||||| |||||||| | |||||| ||||| Sbjct: 1 accagcaccggtatgtatgtagcgaatcgagcttcagacaagatcactcaactcactgac 60 Query: 242 aatgtctacgtctgccgctctggatctgctgctga 276 ||||||||||||||||| |||||||| |||||||| Sbjct: 61 aatgtctacgtctgccgttctggatcggctgctga 95
>gb|AY518885.1| Brassica napus putative proteasome 20S beta1.1 subunit mRNA, partial cds Length = 518 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 182 accagcaccggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgat 241 ||||||||||| |||||||| ||||| || ||||| || ||||| | ||||| ||||| Sbjct: 1 accagcaccggtatgtatgtagcgaatcgagcttcagataagatcacacaactcactgac 60 Query: 242 aatgtctacgtctgccgctctggatctgctgctga 276 ||||||||||||||||| |||||||| |||||||| Sbjct: 61 aatgtctacgtctgccgttctggatcggctgctga 95
>emb|Z99979.1|MAZ99979 Musa acuminata mRNA for unknown ripening-related protein (clone pBAN EU97) Length = 736 Score = 83.8 bits (42), Expect = 6e-13 Identities = 95/113 (84%) Strand = Plus / Plus Query: 422 gttggtggatgggacaaatacgagggaggccaaatttactctgtccctcttggtggaacg 481 ||||||||||||||||||||||| ||||| ||||| || || || || ||||| || || Sbjct: 333 gttggtggatgggacaaatacgaaggaggtcaaatatattccgtgccacttggagggaca 392 Query: 482 attctgaggcaaccatttgcaattggaggatctggttccagttacctgtatgg 534 || |||| |||||| ||||| || ||| ||||||||||||| ||||| ||||| Sbjct: 393 atactgaagcaaccttttgctatcggangatctggttccagctacctttatgg 445 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 145 ctacgacggcggcgtcgtcctcgccgccgactccaggaccagcaccggaatgtatgtggc 204 |||||||||||| |||||||||| ||||| || ||||| ||||| ||||||||||| || Sbjct: 56 ctacgacggcggtgtcgtcctcggagccgattcgaggacgagcacaggaatgtatgtcgc 115 Query: 205 gaaccgtgcttcggacaagattagtcaactgactgataatgtctacgtctgccgctctgg 264 || || || ||||| ||||| | || |||| || ||||||||| | ||||||||||| Sbjct: 116 taatcgggcgtcggataagatcacacagttgacggacaatgtctacatatgccgctctgg 175 Query: 265 atctgctgctga 276 ||| || ||||| Sbjct: 176 atcggcagctga 187
>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74 Length = 194920 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 194 atgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctacgtc 253 ||||| || ||||| || ||||| || ||||||| |||||||| ||||||||||||||| Sbjct: 145071 atgtacgtagcgaatcgagcttctgataagattacacaactgacagataatgtctacgtc 145130 Query: 254 tgccgctctggatc 267 |||||||||||||| Sbjct: 145131 tgccgctctggatc 145144
>emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSA project) Length = 93038 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 194 atgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctacgtc 253 ||||| || ||||| || ||||| || ||||||| |||||||| ||||||||||||||| Sbjct: 28969 atgtacgtagcgaatcgagcttctgataagattacacaactgacagataatgtctacgtc 29028 Query: 254 tgccgctctggatc 267 |||||||||||||| Sbjct: 29029 tgccgctctggatc 29042
>emb|AJ586793.1| Humulus lupulus microsatellite DNA, clone EMFV021 Length = 547 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 197 tatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctacgtctgc 256 ||||| || |||||||| ||||||||||||| ||| || ||||||||||||||||| || Sbjct: 438 tatgttgctaaccgtgcatcggacaagattactcagctcactgataatgtctacgtttgt 379 Query: 257 cgctctggatc 267 ||||| ||||| Sbjct: 378 cgctccggatc 368 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 288 tttcggattatgtacgttattttctccaccagcacac 324 ||||||| ||||| ||||||||||| || |||||||| Sbjct: 82 tttcggactatgtgcgttattttcttcatcagcacac 46
>emb|CR940307.5| M.truncatula DNA sequence from clone MTH2-21G21 on chromosome 3, complete sequence Length = 115223 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 236 actgataatgtctacgtctgccgctctggatc 267 |||||||||||||||||||| ||||||||||| Sbjct: 61756 actgataatgtctacgtctgtcgctctggatc 61787
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 130 catcgtcggcgtctgctacgacggcggcgtcg 161 |||||||||| ||||||||| ||||||||||| Sbjct: 406531 catcgtcggcttctgctacggcggcggcgtcg 406500
>gb|AC123981.18| Pan troglodytes clone rp43-130h22, complete sequence Length = 172816 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 458 tactctgtccctcttggtggaacgatt 484 ||||||||| ||||||||||||||||| Sbjct: 126273 tactctgtctctcttggtggaacgatt 126299
>ref|XM_662679.1| Cryptosporidium hominis TU502 proteasome B type subunit (Chro.20097) partial mRNA Length = 633 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 254 tgccgctctggatctgctgctgacacacaaattatttc 291 ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 169 tgccgttctggatctgcagcagacacccaaattatttc 206
>emb|AL109630.2|DMBR7A4 Drosophila melanogaster BAC clone BACR7A4 Length = 212370 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 266 tctgctgctgacacacaaatta 287 |||||||||||||||||||||| Sbjct: 144104 tctgctgctgacacacaaatta 144083
>emb|BX571738.12| Zebrafish DNA sequence from clone CH211-64K10 in linkage group 16, complete sequence Length = 141217 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 293 gattatgtacgttattttctccacca 318 |||||||||| ||||||||||||||| Sbjct: 123123 gattatgtacattattttctccacca 123098
>gb|AC104287.8| Drosophila melanogaster X BAC RP98-29P19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169557 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 266 tctgctgctgacacacaaatta 287 |||||||||||||||||||||| Sbjct: 147306 tctgctgctgacacacaaatta 147327
>gb|AC097726.4| Drosophila melanogaster X BAC RP98-5N14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 146717 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 266 tctgctgctgacacacaaatta 287 |||||||||||||||||||||| Sbjct: 144473 tctgctgctgacacacaaatta 144452
>ref|XM_626319.1| Cryptosporidium parvum Iowa II Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold (cgd2_860), partial mRNA Length = 747 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 254 tgccgctctggatctgctgctgacacacaaattatttc 291 ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 283 tgccgttctggatctgcagcagacacccaaattatttc 320
>gb|AF097521.1|AF097521 Cryptosporidium parvum proteasome B type subunit (PB) gene, complete cds Length = 1281 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 254 tgccgctctggatctgctgctgacacacaaattatttc 291 ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 483 tgccgttctggatctgcagcagacacccaaattatttc 520
>gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 of 74 of the complete sequence Length = 306598 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 266 tctgctgctgacacacaaatta 287 |||||||||||||||||||||| Sbjct: 120800 tctgctgctgacacacaaatta 120779
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 gatctccgccatggacgccgcctcg 70 ||||||||||||| ||||||||||| Sbjct: 36997 gatctccgccatgtacgccgcctcg 37021
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 ggcgtcgtcctcgccgccgac 175 ||||||||||||||||||||| Sbjct: 2883743 ggcgtcgtcctcgccgccgac 2883723
>emb|AL928630.15| Mouse DNA sequence from clone RP23-33P17 on chromosome 4, complete sequence Length = 202295 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 aatttactctgtccctcttgg 474 ||||||||||||||||||||| Sbjct: 95864 aatttactctgtccctcttgg 95844
>gb|AF104994.1|AF104994 Streptomyces coelicolor A3(2) periplasmic binding protein (atrA), permease (AtrB), ATP-binding protein (atrC), methyltransferase (metZ), signal peptidase, Ni-containing superoxide dismutase (sodN), puromycin N-acetyltransferase (pat), and geranyl transferase (gtr) genes, complete cds; and unknown genes Length = 8568 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 gatctccgccatggacgccgcctcg 70 ||||||||||||| ||||||||||| Sbjct: 1745 gatctccgccatgtacgccgcctcg 1721
>ref|NM_188321.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 327 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cggcgtcgtcctcgccgccg 173 |||||||||||||||||||| Sbjct: 188 cggcgtcgtcctcgccgccg 207
>ref|XM_464899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggcggcgtcgtcctcgccg 170 |||||||||||||||||||| Sbjct: 102 cggcggcgtcgtcctcgccg 83
>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04, complete sequence Length = 168424 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cggcgtcgtcctcgccgccg 173 |||||||||||||||||||| Sbjct: 113285 cggcgtcgtcctcgccgccg 113266
>gb|AC163093.5| Mus musculus chromosome 18, clone RP23-144P22, complete sequence Length = 195116 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gttacctgtatggattgatg 541 |||||||||||||||||||| Sbjct: 121446 gttacctgtatggattgatg 121465
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agggttcgagtccgtcgatc 49 |||||||||||||||||||| Sbjct: 3011606 agggttcgagtccgtcgatc 3011587
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cggcggcgtcgtcctcgccg 170 |||||||||||||||||||| Sbjct: 2508260 cggcggcgtcgtcctcgccg 2508279
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tcatgggcccctcctctgcc 91 |||||||||||||||||||| Sbjct: 108688 tcatgggcccctcctctgcc 108669
>emb|AL139404.9| Human DNA sequence from clone RP11-376D11 on chromosome 10 Contains the 5' end of the SSH3BP gene for spectrin SH3 domain binding protein 1, complete sequence Length = 122913 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 attctgaggcaaccatttgc 501 |||||||||||||||||||| Sbjct: 87006 attctgaggcaaccatttgc 87025
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cggcggcgtcgtcctcgccg 170 |||||||||||||||||||| Sbjct: 688300 cggcggcgtcgtcctcgccg 688319
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cggcggcgtcgtcctcgccg 170 |||||||||||||||||||| Sbjct: 32726 cggcggcgtcgtcctcgccg 32745
>gb|AC048351.18| Homo sapiens 3 BAC RP11-175P19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161687 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 gcctatcagaacaagagcat 402 |||||||||||||||||||| Sbjct: 44664 gcctatcagaacaagagcat 44683
>dbj|AB121977.1| Xanthobacter polyaromaticivorans dbd gene cluster (dbdA, dbdB, dbdCa, dbdCb, dbdCc, dbdD, dbdE), complete and partial cds Length = 6407 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cgccatggacgccgcctcgc 71 |||||||||||||||||||| Sbjct: 5580 cgccatggacgccgcctcgc 5561
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggcggcgtcgtcctcgccg 170 |||||||||||||||||||| Sbjct: 1937633 cggcggcgtcgtcctcgccg 1937614
>ref|XM_393321.2| PREDICTED: Apis mellifera similar to proteasome delta (LOC409831), mRNA Length = 654 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 488 aggcaaccatttgcaattggaggatctggttc 519 ||||||||| || | ||||||||||||||||| Sbjct: 328 aggcaaccaatttccattggaggatctggttc 359
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 gttccagttacctgtatgga 535 |||||||||||||||||||| Sbjct: 3587562 gttccagttacctgtatgga 3587581
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cggcgtcgtcctcgccgccg 173 |||||||||||||||||||| Sbjct: 15458264 cggcgtcgtcctcgccgccg 15458245
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cggcgtcgtcctcgccgccg 173 |||||||||||||||||||| Sbjct: 5684886 cggcgtcgtcctcgccgccg 5684905
>gb|AF245428.1|AF245428 Buxus liukiuensis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 930 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggcggcgtcgtcctcgc 168 |||||||||||||||||||| Sbjct: 711 gacggcggcgtcgtcctcgc 730
>gb|AF245414.1|AF245414 Buxus microphylla subsp. sinica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 902 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggcggcgtcgtcctcgc 168 |||||||||||||||||||| Sbjct: 705 gacggcggcgtcgtcctcgc 724
>gb|AF245413.1|AF245413 Buxus riparia 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggcggcgtcgtcctcgc 168 |||||||||||||||||||| Sbjct: 752 gacggcggcgtcgtcctcgc 771
>gb|AF245412.1|AF245412 Buxus microphylla var. japonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 916 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggcggcgtcgtcctcgc 168 |||||||||||||||||||| Sbjct: 720 gacggcggcgtcgtcctcgc 739
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cggcgtcgtcctcgccgccg 173 |||||||||||||||||||| Sbjct: 150359 cggcgtcgtcctcgccgccg 150378
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cggcgtcgtcctcgccgccg 173 |||||||||||||||||||| Sbjct: 9588 cggcgtcgtcctcgccgccg 9607
>dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026F09 Length = 124371 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggcggcgtcgtcctcgccg 170 |||||||||||||||||||| Sbjct: 8589 cggcggcgtcgtcctcgccg 8570
>dbj|AK120469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109F03, full insert sequence Length = 810 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cggcgtcgtcctcgccgccg 173 |||||||||||||||||||| Sbjct: 295 cggcgtcgtcctcgccgccg 314
>dbj|AK108155.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-G06, full insert sequence Length = 924 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cggcgtcgtcctcgccgccg 173 |||||||||||||||||||| Sbjct: 249 cggcgtcgtcctcgccgccg 268
>dbj|AP002987.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-428C14, complete sequence Length = 166893 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 attggcctatcagaacaaga 398 |||||||||||||||||||| Sbjct: 117810 attggcctatcagaacaaga 117829
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 cggcggcgtcgtcctcgccgccga 174 ||||||||||||| |||||||||| Sbjct: 2441084 cggcggcgtcgtcatcgccgccga 2441107
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 gttccagttacctgtatgga 535 |||||||||||||||||||| Sbjct: 3587507 gttccagttacctgtatgga 3587526
>emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122128 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 gttccagttacctgtatgga 535 |||||||||||||||||||| Sbjct: 101866 gttccagttacctgtatgga 101847
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 gttccagttacctgtatgga 535 |||||||||||||||||||| Sbjct: 102490 gttccagttacctgtatgga 102509
>emb|AL591478.19| Mouse DNA sequence from clone RP23-140D14 on chromosome 2, complete sequence Length = 236979 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 actccaggaccagcaccgga 193 |||||||||||||||||||| Sbjct: 114396 actccaggaccagcaccgga 114415
>emb|AL831776.3| Mouse DNA sequence from clone RP23-307M2 on chromosome 4, complete sequence Length = 204136 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 gttattttctccaccagcacacaa 326 ||||||||||||||||||| |||| Sbjct: 182057 gttattttctccaccagcagacaa 182034 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,094,452 Number of Sequences: 3902068 Number of extensions: 4094452 Number of successful extensions: 99139 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98286 Number of HSP's gapped (non-prelim): 848 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
