ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart26b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184593.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1224 Score = 329 bits (166), Expect = 6e-87 Identities = 280/318 (88%) Strand = Plus / Plus Query: 256 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 315 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 319 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 378 Query: 316 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 375 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 379 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 438 Query: 376 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 435 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 439 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 498 Query: 436 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 495 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 499 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 558 Query: 496 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 555 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 559 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 618 Query: 556 cgcaacatctggcgcccc 573 ||| ||||||||||||| Sbjct: 619 cgcggcatctggcgcccc 636 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 105 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 164 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 141 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 200 Query: 165 agacatcgacttccc 179 |||||||||||||| Sbjct: 201 cgacatcgacttccc 215 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 85 gtcgacgaccactccgccgccggcgccgc 113 |||||||||| ||||||||||| |||||| Sbjct: 106 gtcgacgacccctccgccgccgccgccgc 134
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 329 bits (166), Expect = 6e-87 Identities = 280/318 (88%) Strand = Plus / Minus Query: 256 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 315 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 14377458 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 14377399 Query: 316 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 375 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 14377398 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 14377339 Query: 376 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 435 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 14377338 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 14377279 Query: 436 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 495 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 14377278 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 14377219 Query: 496 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 555 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 14377218 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 14377159 Query: 556 cgcaacatctggcgcccc 573 ||| ||||||||||||| Sbjct: 14377158 cgcggcatctggcgcccc 14377141 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 105 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 164 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 14377636 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 14377577 Query: 165 agacatcgacttccc 179 |||||||||||||| Sbjct: 14377576 cgacatcgacttccc 14377562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 gtcgacgaccactccgccgccggcgccgc 113 |||||||||| ||||||||||| |||||| Sbjct: 14377671 gtcgacgacccctccgccgccgccgccgc 14377643
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 329 bits (166), Expect = 6e-87 Identities = 280/318 (88%) Strand = Plus / Minus Query: 256 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 315 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 126687 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 126628 Query: 316 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 375 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 126627 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 126568 Query: 376 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 435 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 126567 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 126508 Query: 436 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 495 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 126507 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 126448 Query: 496 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 555 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 126447 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 126388 Query: 556 cgcaacatctggcgcccc 573 ||| ||||||||||||| Sbjct: 126387 cgcggcatctggcgcccc 126370 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 105 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 164 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 126865 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 126806 Query: 165 agacatcgacttccc 179 |||||||||||||| Sbjct: 126805 cgacatcgacttccc 126791 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 gtcgacgaccactccgccgccggcgccgc 113 |||||||||| ||||||||||| |||||| Sbjct: 126900 gtcgacgacccctccgccgccgccgccgc 126872
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 329 bits (166), Expect = 6e-87 Identities = 280/318 (88%) Strand = Plus / Minus Query: 256 ggggagcggcggcccctgttccagaggctatggacggaggaggatgagatcgtgatccta 315 |||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 14372433 ggggagcggcggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctg 14372374 Query: 316 cgcgcgttcgccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgac 375 || |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 14372373 cgagcgttcgcggagttcacggcgcagcgcgggacggcgttcgcgtcgcaccagtacgac 14372314 Query: 376 acggaacccttctacgaggagatgcgccgccgcctccagctcgatttctccaagagccag 435 ||||| || ||||||||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 14372313 acggacccgttctacgaggacatgcggcggcgcctccagctcgacttctccaagagccag 14372254 Query: 436 ctcgccgagaagcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgt 495 |||| ||||||||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 14372253 ctcgtcgagaagctccgccgcctcaagcgcaagtaccgcaactgcgtcgaccgcctccgc 14372194 Query: 496 tgctccggcaacactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgct 555 | ||||| | | |||||||| ||||| || |||||||||||| ||||||||||||| Sbjct: 14372193 gccaccggccagtccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcc 14372134 Query: 556 cgcaacatctggcgcccc 573 ||| ||||||||||||| Sbjct: 14372133 cgcggcatctggcgcccc 14372116 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 105 cggcgccgctgcgtcctcctccttccctgacgccgacgcctatggcaacggggactctga 164 |||||| || || |||||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 14372611 cggcgcggccgcctcctcctccttccccgacgccgacgtctatggcaacggggactcgga 14372552 Query: 165 agacatcgacttccc 179 |||||||||||||| Sbjct: 14372551 cgacatcgacttccc 14372537 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 gtcgacgaccactccgccgccggcgccgc 113 |||||||||| ||||||||||| |||||| Sbjct: 14372646 gtcgacgacccctccgccgccgccgccgc 14372618
>ref|XM_479250.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1297 Score = 309 bits (156), Expect = 5e-81 Identities = 270/308 (87%) Strand = Plus / Plus Query: 266 ggcccctgttccagaggctatggacggaggaggatgagatcgtgatcctacgcgcgttcg 325 |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||| Sbjct: 267 ggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctccgcgggttcg 326 Query: 326 ccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaaccct 385 | ||||| || ||| ||| ||||||||||||||||| |||||||||||||| || |||| Sbjct: 327 cggagttcaccgcggcgcgcggcacggcgttcgcgtcgcaccagtacgacaccgacccct 386 Query: 386 tctacgaggagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgaga 445 |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 387 tctacgaggacatgcgcggccgcctccagctcggcttctccaagagccagctcgtcgaga 446 Query: 446 agcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgttgctccggca 505 |||| |||||||| |||||||||||||| ||||| ||| |||||||| | ||||||| Sbjct: 447 agctccgccgcctcaagcgcaagtaccgcaactgcgtctcccgcctccggggatccggca 506 Query: 506 acactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgctcgcaacatct 565 | | |||||||| ||||| || |||||||||||| ||||||||||||| |||||||||| Sbjct: 507 gcgccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcgcgcaacatct 566 Query: 566 ggcgcccc 573 |||||||| Sbjct: 567 ggcgcccc 574
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 309 bits (156), Expect = 5e-81 Identities = 270/308 (87%) Strand = Plus / Plus Query: 266 ggcccctgttccagaggctatggacggaggaggatgagatcgtgatcctacgcgcgttcg 325 |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||| Sbjct: 26359660 ggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctccgcgggttcg 26359719 Query: 326 ccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaaccct 385 | ||||| || ||| ||| ||||||||||||||||| |||||||||||||| || |||| Sbjct: 26359720 cggagttcaccgcggcgcgcggcacggcgttcgcgtcgcaccagtacgacaccgacccct 26359779 Query: 386 tctacgaggagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgaga 445 |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 26359780 tctacgaggacatgcgcggccgcctccagctcggcttctccaagagccagctcgtcgaga 26359839 Query: 446 agcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgttgctccggca 505 |||| |||||||| |||||||||||||| ||||| ||| |||||||| | ||||||| Sbjct: 26359840 agctccgccgcctcaagcgcaagtaccgcaactgcgtctcccgcctccggggatccggca 26359899 Query: 506 acactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgctcgcaacatct 565 | | |||||||| ||||| || |||||||||||| ||||||||||||| |||||||||| Sbjct: 26359900 gcgccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcgcgcaacatct 26359959 Query: 566 ggcgcccc 573 |||||||| Sbjct: 26359960 ggcgcccc 26359967 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 88 gacgaccactccgccgccggcgccg 112 ||||||||||||||||||||||||| Sbjct: 1302372 gacgaccactccgccgccggcgccg 1302396 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cgccgctgcgtcctcctcct 127 |||||||||||||||||||| Sbjct: 10973450 cgccgctgcgtcctcctcct 10973431
>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_D11 Length = 109399 Score = 309 bits (156), Expect = 5e-81 Identities = 270/308 (87%) Strand = Plus / Plus Query: 266 ggcccctgttccagaggctatggacggaggaggatgagatcgtgatcctacgcgcgttcg 325 |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||| Sbjct: 13900 ggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctccgcgggttcg 13959 Query: 326 ccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaaccct 385 | ||||| || ||| ||| ||||||||||||||||| |||||||||||||| || |||| Sbjct: 13960 cggagttcaccgcggcgcgcggcacggcgttcgcgtcgcaccagtacgacaccgacccct 14019 Query: 386 tctacgaggagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgaga 445 |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 14020 tctacgaggacatgcgcggccgcctccagctcggcttctccaagagccagctcgtcgaga 14079 Query: 446 agcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgttgctccggca 505 |||| |||||||| |||||||||||||| ||||| ||| |||||||| | ||||||| Sbjct: 14080 agctccgccgcctcaagcgcaagtaccgcaactgcgtctcccgcctccggggatccggca 14139 Query: 506 acactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgctcgcaacatct 565 | | |||||||| ||||| || |||||||||||| ||||||||||||| |||||||||| Sbjct: 14140 gcgccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcgcgcaacatct 14199 Query: 566 ggcgcccc 573 |||||||| Sbjct: 14200 ggcgcccc 14207
>dbj|AK068356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146D06, full insert sequence Length = 1297 Score = 309 bits (156), Expect = 5e-81 Identities = 270/308 (87%) Strand = Plus / Plus Query: 266 ggcccctgttccagaggctatggacggaggaggatgagatcgtgatcctacgcgcgttcg 325 |||| ||||||||| |||| |||||||||||||| |||||||||||||| |||| ||||| Sbjct: 267 ggccgctgttccagcggctgtggacggaggaggacgagatcgtgatcctccgcgggttcg 326 Query: 326 ccgagtttacggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaaccct 385 | ||||| || ||| ||| ||||||||||||||||| |||||||||||||| || |||| Sbjct: 327 cggagttcaccgcggcgcgcggcacggcgttcgcgtcgcaccagtacgacaccgacccct 386 Query: 386 tctacgaggagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgaga 445 |||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 387 tctacgaggacatgcgcggccgcctccagctcggcttctccaagagccagctcgtcgaga 446 Query: 446 agcttcgccgccttaagcgcaagtaccgtaactgtgtcgagcgcctccgttgctccggca 505 |||| |||||||| |||||||||||||| ||||| ||| |||||||| | ||||||| Sbjct: 447 agctccgccgcctcaagcgcaagtaccgcaactgcgtctcccgcctccggggatccggca 506 Query: 506 acactttctcctttcgctcccctcacgagcaggccgtcttcgagatcgctcgcaacatct 565 | | |||||||| ||||| || |||||||||||| ||||||||||||| |||||||||| Sbjct: 507 gcgccttctccttccgctcgccgcacgagcaggccatcttcgagatcgcgcgcaacatct 566 Query: 566 ggcgcccc 573 |||||||| Sbjct: 567 ggcgcccc 574
>ref|NM_187846.1| Oryza sativa (japonica cultivar-group), Ozsa8290 predicted mRNA Length = 936 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 334 acggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaacccttctacgag 393 ||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct: 46 acggcgcggcggggcaccacgttcgcgtcgcaccagtacgacacggggcccttctacgac 105 Query: 394 gagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgagaagcttcgc 453 ||||| || || |||||| |||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 106 gagatccggcggcgcctctccttcgacttcaccaagagccagctcgtcgagaagctccgc 165 Query: 454 cgcct 458 ||||| Sbjct: 166 cgcct 170
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 334 acggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaacccttctacgag 393 ||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct: 8234788 acggcgcggcggggcaccacgttcgcgtcgcaccagtacgacacggggcccttctacgac 8234729 Query: 394 gagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgagaagcttcgc 453 ||||| || || |||||| |||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 8234728 gagatccggcggcgcctctccttcgacttcaccaagagccagctcgtcgagaagctccgc 8234669 Query: 454 cgcct 458 ||||| Sbjct: 8234668 cgcct 8234664 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccactccgccgccggcgccg 112 |||||||||||||||||||| Sbjct: 40279586 ccactccgccgccggcgccg 40279567
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 334 acggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaacccttctacgag 393 ||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct: 28719 acggcgcggcggggcaccacgttcgcgtcgcaccagtacgacacggggcccttctacgac 28660 Query: 394 gagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgagaagcttcgc 453 ||||| || || |||||| |||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 28659 gagatccggcggcgcctctccttcgacttcaccaagagccagctcgtcgagaagctccgc 28600 Query: 454 cgcct 458 ||||| Sbjct: 28599 cgcct 28595
>dbj|AK072886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149P13, full insert sequence Length = 1210 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 334 acggcgcagcggggcacggcgttcgcgtcccaccagtacgacacggaacccttctacgag 393 ||||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct: 47 acggcgcggcggggcaccacgttcgcgtcgcaccagtacgacacggggcccttctacgac 106 Query: 394 gagatgcgccgccgcctccagctcgatttctccaagagccagctcgccgagaagcttcgc 453 ||||| || || |||||| |||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 107 gagatccggcggcgcctctccttcgacttcaccaagagccagctcgtcgagaagctccgc 166 Query: 454 cgcct 458 ||||| Sbjct: 167 cgcct 171
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 353 cgttcgcgtcccaccagtacgacacggaacccttctacgaggagatgcgc 402 |||||||||| ||||| ||| |||| || ||||| ||||||||||||||| Sbjct: 26113125 cgttcgcgtcgcaccaatacaacacagaccccttatacgaggagatgcgc 26113076 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 98 ccgccgccggcgccgctgcgtcctcctccttccc 131 ||||||||| |||||| |||||||||||||||| Sbjct: 10989813 ccgccgccgccgccgccacgtcctcctccttccc 10989780
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 353 cgttcgcgtcccaccagtacgacacggaacccttctacgaggagatgcgc 402 |||||||||| ||||| ||| |||| || ||||| ||||||||||||||| Sbjct: 9952 cgttcgcgtcgcaccaatacaacacagaccccttatacgaggagatgcgc 9903
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 353 cgttcgcgtcccaccagtacgacacggaacccttctacgaggagatgcgc 402 |||||||||| ||||| ||| |||| || ||||| ||||||||||||||| Sbjct: 120571 cgttcgcgtcgcaccaatacaacacagaccccttatacgaggagatgcgc 120522
>ref|XM_476454.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1920 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 88 gacgaccactccgccgccggcgccg 112 ||||||||||||||||||||||||| Sbjct: 1429 gacgaccactccgccgccggcgccg 1453
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 88 gacgaccactccgccgccggcgccg 112 ||||||||||||||||||||||||| Sbjct: 67207 gacgaccactccgccgccggcgccg 67231
>dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F05, full insert sequence Length = 1440 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 88 gacgaccactccgccgccggcgccg 112 ||||||||||||||||||||||||| Sbjct: 507 gacgaccactccgccgccggcgccg 531
>gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57E-57F, BAC clone BACR34C17, complete sequence Length = 167447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 ctccgatccgatccgatgcgatgc 76 |||||||||||||||||||||||| Sbjct: 106052 ctccgatccgatccgatgcgatgc 106075
>gb|AC007803.7|AC007803 Drosophila melanogaster, chromosome 2R, region 58A1-58A2, BAC clone BACR13F14, complete sequence Length = 198244 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 53 ctccgatccgatccgatgcgatgc 76 |||||||||||||||||||||||| Sbjct: 195415 ctccgatccgatccgatgcgatgc 195392
>gb|AC009912.5|AC009912 Drosophila melanogaster, chromosome 2R, region 57F-58A, BAC clone BACR46G10, complete sequence Length = 165158 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 ctccgatccgatccgatgcgatgc 76 |||||||||||||||||||||||| Sbjct: 67481 ctccgatccgatccgatgcgatgc 67504
>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete sequence Length = 313634 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 ctccgatccgatccgatgcgatgc 76 |||||||||||||||||||||||| Sbjct: 256588 ctccgatccgatccgatgcgatgc 256611
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cgacgaccactccgccgccggcg 109 ||||||||||||||||||||||| Sbjct: 81699 cgacgaccactccgccgccggcg 81677
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 ggtcgacgaccactccgccgccg 106 ||||||||||||||||||||||| Sbjct: 93871 ggtcgacgaccactccgccgccg 93893
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cgacgaccactccgccgccggcg 109 ||||||||||||||||||||||| Sbjct: 17573888 cgacgaccactccgccgccggcg 17573866
>gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone rp23-362c8, complete sequence Length = 238658 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 191 ttcccaaccctcccttctcctcc 213 ||||||||||||||||||||||| Sbjct: 123209 ttcccaaccctcccttctcctcc 123187
>dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H09, full insert sequence Length = 1494 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 cgacgaccactccgccgccggcg 109 ||||||||||||||||||||||| Sbjct: 934 cgacgaccactccgccgccggcg 956
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 cgacgaccactccgccgccggcg 109 ||||||||||||||||||||||| Sbjct: 17667712 cgacgaccactccgccgccggcg 17667690
>ref|XM_465024.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1108 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 98 ccgccgccggcgccgctgcgtcctcctccttccc 131 ||||||||| |||||| |||||||||||||||| Sbjct: 245 ccgccgccgccgccgccacgtcctcctccttccc 212
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 96 ctccgccgccggcgccgctgcgtcctcctc 125 ||||||||||| |||||| ||||||||||| Sbjct: 106329 ctccgccgccgccgccgccgcgtcctcctc 106300
>gb|AC151913.1| Pan troglodytes chromosome X clone RP43-057B02 map human ortholog q26.2, complete sequence Length = 173886 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 aattcccaaccctcccttctcc 210 |||||||||||||||||||||| Sbjct: 129737 aattcccaaccctcccttctcc 129716
>gb|AC151912.1| Pan troglodytes chromosome X clone PTB-093M21 map human ortholog q26.2, complete sequence Length = 180904 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 aattcccaaccctcccttctcc 210 |||||||||||||||||||||| Sbjct: 17018 aattcccaaccctcccttctcc 16997
>gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete sequence Length = 171235 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 93 ccactccgccgccggcgccgctgcgtcctcctcc 126 ||||||||||||||||||| | || ||||||||| Sbjct: 46074 ccactccgccgccggcgccaccgcctcctcctcc 46041
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence Length = 177066 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 412 cagctcgatttctccaagagcc 433 |||||||||||||||||||||| Sbjct: 41577 cagctcgatttctccaagagcc 41598
>gb|AC010117.6| Drosophila melanogaster 3L BAC RP98-21J2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178965 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 tccgatccgatccgatgcgatg 75 |||||||||||||||||||||| Sbjct: 13057 tccgatccgatccgatgcgatg 13078
>gb|AC093551.3| Drosophila melanogaster 3L BAC RP98-48C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179055 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 tccgatccgatccgatgcgatg 75 |||||||||||||||||||||| Sbjct: 62189 tccgatccgatccgatgcgatg 62168
>ref|NM_136634.2| Drosophila melanogaster Rep2 CG1975-RA (Rep2), mRNA Length = 5230 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 93 ccactccgccgccggcgccgctgcgtcctcctcc 126 ||||||||||||||||||| | || ||||||||| Sbjct: 1467 ccactccgccgccggcgccaccgcctcctcctcc 1434
>gb|AY060400.1| Drosophila melanogaster LD32009 full length cDNA Length = 5216 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 93 ccactccgccgccggcgccgctgcgtcctcctcc 126 ||||||||||||||||||| | || ||||||||| Sbjct: 1437 ccactccgccgccggcgccaccgcctcctcctcc 1404
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 96 ctccgccgccggcgccgctgcgtcctcctc 125 ||||||||||| |||||| ||||||||||| Sbjct: 16465892 ctccgccgccgccgccgccgcgtcctcctc 16465863
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 tggtcgcgcccgcctccgcctcggcc 249 ||||||||||||||||||||| |||| Sbjct: 3768618 tggtcgcgcccgcctccgccttggcc 3768643
>dbj|AP004212.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1086_G08 Length = 59883 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 98 ccgccgccggcgccgctgcgtcctcctccttccc 131 ||||||||| |||||| |||||||||||||||| Sbjct: 16476 ccgccgccgccgccgccacgtcctcctccttccc 16443
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 98 ccgccgccggcgccgctgcgtcctcctccttccc 131 ||||||||| |||||| |||||||||||||||| Sbjct: 196012 ccgccgccgccgccgccacgtcctcctccttccc 195979
>dbj|AK101872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070F10, full insert sequence Length = 1108 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 98 ccgccgccggcgccgctgcgtcctcctccttccc 131 ||||||||| |||||| |||||||||||||||| Sbjct: 245 ccgccgccgccgccgccacgtcctcctccttccc 212
>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete sequence Length = 243313 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 93 ccactccgccgccggcgccgctgcgtcctcctcc 126 ||||||||||||||||||| | || ||||||||| Sbjct: 232996 ccactccgccgccggcgccaccgcctcctcctcc 232963
>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete sequence Length = 323816 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 tccgatccgatccgatgcgatg 75 |||||||||||||||||||||| Sbjct: 55069 tccgatccgatccgatgcgatg 55048
>gb|AC169985.2| Mus musculus BAC clone RP23-289G14 from chromosome 13, complete sequence Length = 218393 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 507 cactttctcctttcgctcccctcac 531 |||||||||||||| |||||||||| Sbjct: 115203 cactttctcctttccctcccctcac 115227
>gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosome 9, complete sequence Length = 203468 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 103 gccggcgccgctgcgtcctcctcct 127 |||||||||||||| |||||||||| Sbjct: 4603 gccggcgccgctgcctcctcctcct 4579
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone BACR17H16, complete sequence Length = 182080 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 tccgatccgatccgatgcgat 74 ||||||||||||||||||||| Sbjct: 52704 tccgatccgatccgatgcgat 52684
>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone BACR48M01, complete sequence Length = 188272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cgatccgatccgatgcgatgc 76 ||||||||||||||||||||| Sbjct: 137366 cgatccgatccgatgcgatgc 137386
>gb|AC115625.3| Homo sapiens BAC clone RP11-588E23 from 2, complete sequence Length = 163505 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tcccttctcctcctctgcttc 221 ||||||||||||||||||||| Sbjct: 121868 tcccttctcctcctctgcttc 121888
>gb|AC016906.7| Homo sapiens BAC clone RP11-436E24 from 2, complete sequence Length = 183045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tcccttctcctcctctgcttc 221 ||||||||||||||||||||| Sbjct: 66184 tcccttctcctcctctgcttc 66204
>ref|XM_577390.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 1 (HMG-1) (Amphoterin) (Heparin-binding protein p30) (LOC501962), mRNA Length = 1074 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ctcccttctcctcctctgctt 220 ||||||||||||||||||||| Sbjct: 801 ctcccttctcctcctctgctt 821
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 tccgatccgatccgatgcgat 74 ||||||||||||||||||||| Sbjct: 117128 tccgatccgatccgatgcgat 117108 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 19460 ctccgccgccgccgccgccgcctcctcctcct 19491
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cgatccgatccgatgcgatgc 76 ||||||||||||||||||||| Sbjct: 170906 cgatccgatccgatgcgatgc 170926
>gb|AC163641.5| Mus musculus BAC clone RP24-445G19 from chromosome 13, complete sequence Length = 190073 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 507 cactttctcctttcgctcccctcac 531 |||||||||||||| |||||||||| Sbjct: 102536 cactttctcctttccctcccctcac 102560
>gb|AF004882.1|AF004882 Homo sapiens N-acetylglucosaminyltransferase gene, partial cds Length = 8346 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tcccttctcctcctctgcttc 221 ||||||||||||||||||||| Sbjct: 196 tcccttctcctcctctgcttc 216
>ref|XM_483482.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1148 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 ccgccgccggcgccgctgcgtcctcctc 125 ||||||||| |||||| ||||||||||| Sbjct: 53 ccgccgccgccgccgccgcgtcctcctc 80
>ref|XM_450351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 20 ctccgccgccgccgccgccgcctcctcctcct 51
>ref|XM_507427.1| PREDICTED Oryza sativa (japonica cultivar-group), P0523B07.46 mRNA Length = 914 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 21 ctccgccgccgccgccgccgcctcctcctcct 52
>ref|XM_506642.2| PREDICTED Oryza sativa (japonica cultivar-group), P0523B07.46 mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 7 ctccgccgccgccgccgccgcctcctcctcct 38
>ref|NM_195286.1| Oryza sativa (japonica cultivar-group) putative proline-rich cell wall protein (OSJNBa0040E17.25), mRNA Length = 657 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 tcctccttccctgacgccgacgcc 144 ||||||||||||| |||||||||| Sbjct: 339 tcctccttccctgccgccgacgcc 362
>ref|NM_185292.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cgccgctgcgtcctcctcct 127 |||||||||||||||||||| Sbjct: 367 cgccgctgcgtcctcctcct 348
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 actccgccgccggcgccgct 114 |||||||||||||||||||| Sbjct: 24160 actccgccgccggcgccgct 24141
>ref|XM_419789.1| PREDICTED: Gallus gallus hypothetical gene supported by CR407212 (LOC421759), mRNA Length = 1360 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 ccgctgcgtcctcctccttccctg 133 ||||||| |||||||||||||||| Sbjct: 52 ccgctgcatcctcctccttccctg 29
>gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome 7, complete sequence Length = 232770 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cctcccttctcctcctctgc 218 |||||||||||||||||||| Sbjct: 67118 cctcccttctcctcctctgc 67099
>ref|XM_543055.2| PREDICTED: Canis familiaris similar to sal-like 4 (LOC485931), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgccgccggcgccgctgcg 117 |||||||||||||||||||| Sbjct: 121 ccgccgccggcgccgctgcg 102
>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence Length = 217404 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cctcccttctcctcctctgc 218 |||||||||||||||||||| Sbjct: 209897 cctcccttctcctcctctgc 209878
>gb|AC126255.3| Mus musculus BAC clone RP24-218F22 from chromosome 18, complete sequence Length = 166367 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 ccctcccttctcctcctctgcttc 221 ||||||||||||||||||| |||| Sbjct: 53182 ccctcccttctcctcctcttcttc 53205
>gb|AC122904.2| Mus musculus BAC clone RP23-46H15 from 1, complete sequence Length = 139848 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccttctcctcctctgcttcc 222 |||||||||||||||||||| Sbjct: 119480 ccttctcctcctctgcttcc 119461
>gb|AC113597.12| Mus musculus chromosome 1, clone RP23-375F6, complete sequence Length = 224996 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccttctcctcctctgcttcc 222 |||||||||||||||||||| Sbjct: 195113 ccttctcctcctctgcttcc 195132
>emb|AL163283.2|HS21C083 Homo sapiens chromosome 21 segment HS21C083 Length = 340000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ctcctcctctgcttccgtgg 226 |||||||||||||||||||| Sbjct: 251592 ctcctcctctgcttccgtgg 251611
>gb|AC148360.10| Medicago truncatula clone mth2-27i5, complete sequence Length = 113746 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gatccgatccgatgcgatgc 76 |||||||||||||||||||| Sbjct: 35850 gatccgatccgatgcgatgc 35831
>gb|AC164010.2| Mus musculus chromosome 18, clone RP24-391C15, complete sequence Length = 162585 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cctcccttctcctcctctgc 218 |||||||||||||||||||| Sbjct: 73781 cctcccttctcctcctctgc 73800
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 actccgccgccggcgccgct 114 |||||||||||||||||||| Sbjct: 1505587 actccgccgccggcgccgct 1505568
>emb|AL138972.1|DMBR25B3 Drosophila melanogaster BAC clone BACR25B3 Length = 154329 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gatccgatccgatgcgatgc 76 |||||||||||||||||||| Sbjct: 129687 gatccgatccgatgcgatgc 129668
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 actccgccgccggcgccgct 114 |||||||||||||||||||| Sbjct: 118341 actccgccgccggcgccgct 118322
>emb|AL662881.10| Mouse DNA sequence from clone RP23-321C9 on chromosome 11 Contains part of the gene for a novel protein similar to Tensin Tns, complete sequence Length = 154959 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 accctcccttctcctcctct 216 |||||||||||||||||||| Sbjct: 65789 accctcccttctcctcctct 65770
>emb|AL954236.1| Pan troglodytes chromosome 22 clone RP43-054L10 map 22q22.2-q22.3, complete sequence Length = 195913 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ctcctcctctgcttccgtgg 226 |||||||||||||||||||| Sbjct: 57733 ctcctcctctgcttccgtgg 57752
>emb|AL954235.1| Pan troglodytes chromosome 22 clone RP43-030A20 map 22q22.2-q22.3, complete sequence Length = 169458 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ctcctcctctgcttccgtgg 226 |||||||||||||||||||| Sbjct: 157246 ctcctcctctgcttccgtgg 157265
>emb|AL844601.4| Mouse DNA sequence from clone RP23-245J22 on chromosome 4, complete sequence Length = 166294 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 191 ttcccaaccctcccttctcctcctctgcttcc 222 |||| ||||||||||||| | ||||||||||| Sbjct: 74896 ttccaaaccctcccttctacccctctgcttcc 74865
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 tcctccttccctgacgccgacgcc 144 ||||||||||||| |||||||||| Sbjct: 109059 tcctccttccctgccgccgacgcc 109082
>gb|AC104140.5| Drosophila melanogaster X BAC RP98-9H13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191342 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gatccgatccgatgcgatgc 76 |||||||||||||||||||| Sbjct: 84887 gatccgatccgatgcgatgc 84868
>gb|AC104626.3| Drosophila melanogaster X BAC RP98-28L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184454 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tgcgccgccgcctccagctc 417 |||||||||||||||||||| Sbjct: 37987 tgcgccgccgcctccagctc 38006
>ref|NM_167620.2| Drosophila melanogaster CG32547-PA (CG32547) mRNA, complete cds Length = 2976 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 118 ctccgccgccgccgccgccgcctcctcctcct 87
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 aggagatgcgccgccgcctc 411 |||||||||||||||||||| Sbjct: 2505809 aggagatgcgccgccgcctc 2505828
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 cgccgagaagcttcgccgcc 457 |||||||||||||||||||| Sbjct: 451510 cgccgagaagcttcgccgcc 451529
>ref|NM_132472.1| Drosophila melanogaster CG12625-RA (CG12625), mRNA Length = 804 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tgcgccgccgcctccagctc 417 |||||||||||||||||||| Sbjct: 120 tgcgccgccgcctccagctc 101
>gb|AC025456.7| Homo sapiens chromosome 5 clone CTD-2197O4, complete sequence Length = 139086 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 accctcccttctcctcctct 216 |||||||||||||||||||| Sbjct: 85622 accctcccttctcctcctct 85641
>gb|AC013432.4| Drosophila melanogaster, chromosome X, region 15F-15F, BAC clone BACR01K05, complete sequence Length = 162761 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tccgatccgatccgatgcgatgct 77 |||||||||| ||||||||||||| Sbjct: 38919 tccgatccgaaccgatgcgatgct 38942
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 gccgcctccagctcgatttctcca 427 ||||||||||||||| |||||||| Sbjct: 5058754 gccgcctccagctcgctttctcca 5058731
>emb|CR407212.1| Gallus gallus finished cDNA, clone ChEST800i10 Length = 1363 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 ccgctgcgtcctcctccttccctg 133 ||||||| |||||||||||||||| Sbjct: 52 ccgctgcatcctcctccttccctg 29
>gb|AC109243.10| Mus musculus chromosome 18, clone RP23-139O19, complete sequence Length = 186687 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cctcccttctcctcctctgc 218 |||||||||||||||||||| Sbjct: 162292 cctcccttctcctcctctgc 162311
>gb|AC175674.2| Gallus gallus BAC clone CH261-137E22 from chromosome ul, complete sequence Length = 216348 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccttctcctcctctgcttcc 222 |||||||||||||||||||| Sbjct: 66550 ccttctcctcctctgcttcc 66531
>gb|AF064866.2|AF064866 Homo sapiens chromosome 21 clone PAC 198E8, map 21q22.3, complete sequence Length = 119847 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ctcctcctctgcttccgtgg 226 |||||||||||||||||||| Sbjct: 64903 ctcctcctctgcttccgtgg 64922
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 tcctccttccctgacgccgacgcc 144 ||||||||||||| |||||||||| Sbjct: 5957254 tcctccttccctgccgccgacgcc 5957231 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 actccgccgccggcgccgct 114 |||||||||||||||||||| Sbjct: 1505587 actccgccgccggcgccgct 1505568
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 4339664 ctccgccgccgccgccgccgcctcctcctcct 4339633
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 ccgccgccggcgccgctgcgtcctcctc 125 ||||||||| |||||| ||||||||||| Sbjct: 26457301 ccgccgccgccgccgccgcgtcctcctc 26457328
>gb|AC010708.10|AC010708 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR10E05, complete sequence Length = 188766 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 180071 ctccgccgccgccgccgccgcctcctcctcct 180102
>gb|AC012098.9|AC012098 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR03K10, complete sequence Length = 188489 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 95448 ctccgccgccgccgccgccgcctcctcctcct 95479
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccactccgccgccggcgccg 112 |||||||||||||||||||| Sbjct: 145364 ccactccgccgccggcgccg 145345
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgccgccggcgccgctgcg 117 |||||||||||||||||||| Sbjct: 3816498 ccgccgccggcgccgctgcg 3816479
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 ggccgtcttcgagatcgctc 556 |||||||||||||||||||| Sbjct: 6631912 ggccgtcttcgagatcgctc 6631931
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 42482 ctccgccgccgccgccgccgcctcctcctcct 42451
>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0523B07 Length = 170510 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 163423 ctccgccgccgccgccgccgcctcctcctcct 163392
>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0091I19 Length = 126544 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 cgccgctgcgtcctcctcct 127 |||||||||||||||||||| Sbjct: 35393 cgccgctgcgtcctcctcct 35374
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 ccgccgccggcgccgctgcgtcctcctc 125 ||||||||| |||||| ||||||||||| Sbjct: 106853 ccgccgccgccgccgccgcgtcctcctc 106880
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 ccgccgccggcgccgctgcgtcctcctc 125 ||||||||| |||||| ||||||||||| Sbjct: 6168 ccgccgccgccgccgccgcgtcctcctc 6195
>dbj|AK120273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048E22, full insert sequence Length = 915 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 21 ctccgccgccgccgccgccgcctcctcctcct 52
>emb|AJ001438.1|SS95BASAL Spermatozopsis similis mRNA for 95 kD basal apparatus-protein Length = 3113 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gcccgcctccgcctcggcca 250 |||||||||||||||||||| Sbjct: 1345 gcccgcctccgcctcggcca 1326
>dbj|AK110737.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F04, full insert sequence Length = 1577 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccactccgccgccggcgccg 112 |||||||||||||||||||| Sbjct: 685 ccactccgccgccggcgccg 704
>dbj|AK105087.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A12, full insert sequence Length = 834 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 41 ctccgccgccgccgccgccgcctcctcctcct 72
>dbj|AK072488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134I03, full insert sequence Length = 936 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 96 ctccgccgccggcgccgctgcgtcctcctcct 127 ||||||||||| |||||| || |||||||||| Sbjct: 7 ctccgccgccgccgccgccgcctcctcctcct 38
>dbj|AK067106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L20, full insert sequence Length = 1148 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 ccgccgccggcgccgctgcgtcctcctc 125 ||||||||| |||||| ||||||||||| Sbjct: 53 ccgccgccgccgccgccgcgtcctcctc 80
>gb|AY105590.1| Zea mays PCO144805 mRNA sequence Length = 1389 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 ccgccgccggcgccgctgcgtcctcctc 125 ||||||||| |||||| ||||||||||| Sbjct: 152 ccgccgccgccgccgccgcgtcctcctc 179
>gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 of 74 of the complete sequence Length = 314205 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 tccgatccgatccgatgcgatgct 77 |||||||||| ||||||||||||| Sbjct: 127480 tccgatccgaaccgatgcgatgct 127457
>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete sequence Length = 283075 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tgcgccgccgcctccagctc 417 |||||||||||||||||||| Sbjct: 160827 tgcgccgccgcctccagctc 160846
>gb|AE003424.2| Drosophila melanogaster chromosome X, section 8 of 74 of the complete sequence Length = 274777 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gatccgatccgatgcgatgc 76 |||||||||||||||||||| Sbjct: 221355 gatccgatccgatgcgatgc 221336
>gb|AC116511.15| Mus musculus chromosome 8, clone RP24-314H15, complete sequence Length = 197718 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 cctcccttctcctcctctgcttcc 222 |||||||||||||||||| ||||| Sbjct: 78690 cctcccttctcctcctcttcttcc 78667
>emb|CT030655.7| Mouse DNA sequence from clone RP23-259C9 on chromosome 13, complete sequence Length = 120944 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccttctcctcctctgcttcc 222 |||||||||||||||||||| Sbjct: 105638 ccttctcctcctctgcttcc 105619
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 tcctccttccctgacgccgacgcc 144 ||||||||||||| |||||||||| Sbjct: 5958440 tcctccttccctgccgccgacgcc 5958417 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 actccgccgccggcgccgct 114 |||||||||||||||||||| Sbjct: 1505584 actccgccgccggcgccgct 1505565
>gb|AC145954.3| Gallus gallus BAC clone CH261-13B2 from chromosome unknown, complete sequence Length = 192205 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ccgctgcgtcctcctccttccctg 133 ||||||| |||||||||||||||| Sbjct: 176583 ccgctgcatcctcctccttccctg 176606
>dbj|D85170.1| Streptomyces mauvecolor DNA for pre-enomycin, complete cds Length = 573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 gtcgcgcccgcctccgcctc 245 |||||||||||||||||||| Sbjct: 154 gtcgcgcccgcctccgcctc 173 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,180,342 Number of Sequences: 3902068 Number of extensions: 4180342 Number of successful extensions: 124806 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121751 Number of HSP's gapped (non-prelim): 3043 length of query: 574 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 551 effective length of database: 17,143,297,704 effective search space: 9445957034904 effective search space used: 9445957034904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
