ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart25h10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF161718.1|AF161718 Triticum aestivum Sec61p (sec61) mRNA, complete cds Length = 1630 Score = 916 bits (462), Expect = 0.0 Identities = 495/506 (97%) Strand = Plus / Plus Query: 114 atggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccggaa 173 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1 atggctggcggctttcgggtgctacatcttgtcaggcccttcttggctttcttgccggaa 60 Query: 174 gtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttct 233 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgcagagtgctgacaggaaaataccatttagagaaaaagtgatctacaccgtcatttct 120 Query: 234 ctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactgga 293 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 ctcttcattttcctggtgtgcagtcagctcccgctctatggcatccattcaaccactgga 180 Query: 294 gctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggag 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggag 240 Query: 354 ctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatccaag 413 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaag 300 Query: 414 attattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaag 473 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 301 attattgaagttgacaacagtgtgagagaggatcgtgctctgctgaatggtgcacagaag 360 Query: 474 ttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtat 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtat 420 Query: 534 ggcagtgtgagccaacttggaactgggaatgctattctcatcatacttcagcttttcttt 593 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 421 ggcagtgtgagccaacttggaactggaaatgccattctcatcatacttcagcttttcttt 480 Query: 594 gctggcatcattgtcatctgtctaga 619 |||||||||||||||||||||||||| Sbjct: 481 gctggcatcattgtcatctgtctaga 506
>dbj|AK100597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107A15, full insert sequence Length = 2132 Score = 670 bits (338), Expect = 0.0 Identities = 464/506 (91%) Strand = Plus / Plus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 |||||||||||||| ||||| || |||||||| |||||||| || ||||||||||||| Sbjct: 150 aagatggctggcggttttcgagtactgcatcttgtcaggccctttctggctttcttgcca 209 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 210 gaagtacagagcgctgataggaaaataccattcagagaaaaagtgatctataccgttatc 269 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 ||||||||||||||||| |||||||||||||| || |||||||| || || || || ||| Sbjct: 270 tctctcttcattttcctggtgtgcagtcagctaccactctatggaattcactcaactact 329 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 330 ggagcagatcctttctactggatgcgtgttattcttgcttcaaaccgtggtactgttatg 389 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 390 gagctgggtattaccccaattgtgacatctggaatggtaatgcaacttctagtgggatca 449 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaa 470 |||||||||||||| |||||||||||||||||||| ||||| || |||||||| |||||| Sbjct: 450 aagattattgaagttgacaacagtgtgagagaggaccgtgcacttctgaatggcgcacaa 509 Query: 471 aagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatg 530 || |||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 510 aaattgctgggcatcttgattgctattggggaagctgtggcatatgtgctgtctggaatg 569 Query: 531 tatggcagtgtgagccaacttggaactgggaatgctattctcatcatacttcagcttttc 590 ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 570 tatggcagtgtaagccaacttggaactgggaatgccattctcatcatcctccagcttttc 629 Query: 591 tttgctggcatcattgtcatctgtct 616 |||||||||||||||||||||||||| Sbjct: 630 tttgctggcatcattgtcatctgtct 655
>gb|BT016615.1| Zea mays clone Contig448 mRNA sequence Length = 1755 Score = 658 bits (332), Expect = 0.0 Identities = 467/512 (91%) Strand = Plus / Plus Query: 103 cggcccggaagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctt 162 ||||| ||||||||||||||||||| |||| ||||||||||||||||| || |||||| Sbjct: 91 cggccgggaagatggctggcggcttcagggtactgcatctggtcaggccctttctggctt 150 Query: 163 tcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctaca 222 ||||||| || |||||||| || |||||||| |||||||| ||||||||||| ||||||| Sbjct: 151 tcttgccagaggtgcagagcgcggataggaagataccattcagagaaaaagttatctaca 210 Query: 223 ccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccatt 282 | || ||||||||||||||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 211 ctgttatttctctcttcatttttctggtgtgcagccagctcccactctatggcattcatt 270 Query: 283 cgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggta 342 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 271 cgacgactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgtggca 330 Query: 343 ctgtcatggagctgggtattaccccaattgtgacacctggaatggttatgcaacttctag 402 |||| |||||| |||||||||| ||||||||||| |||| ||||| ||||||||||| | Sbjct: 331 ctgtgatggagttgggtattactccaattgtgacctctggtatggtaatgcaacttcttg 390 Query: 403 tgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatg 462 | ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 391 tcggatcgaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctgaatg 450 Query: 463 gtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgt 522 |||||||||||||||| |||||| |||| || ||||||||||||||||||||||| |||| Sbjct: 451 gtgcacaaaagttgcttggtatcttgatcgctattggggaagctgtggcatatgtcctgt 510 Query: 523 ctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcatacttc 582 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 511 ctggaatgtatggtagtgtaagccaacttggaacagggaatgctattctcattatacttc 570 Query: 583 agcttttctttgctggcatcattgtcatctgt 614 |||||||||||||||||||||||||||||||| Sbjct: 571 agcttttctttgctggcatcattgtcatctgt 602
>dbj|AK073633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048G12, full insert sequence Length = 1970 Score = 654 bits (330), Expect = 0.0 Identities = 462/506 (91%) Strand = Plus / Plus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 ||||||||||| |||||| |||| ||||||| ||||||||||| | |||||| |||| Sbjct: 145 aagatggctggtggctttagggtattgcatcttgtcaggccttttctagctttcctgcct 204 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 205 gaagtacagagtgctgataggaaaataccatttagagaaaaagtgatctacactgttatt 264 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 || || ||||||||||| || ||||| ||||| || || |||||||||||||| || ||| Sbjct: 265 tccctattcattttcctggtatgcagccagctaccactgtatggcatccattcaactact 324 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 325 ggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgtggtactgttatg 384 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||| || |||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 385 gagctgggtatcactccaattgtgacatctggcatggtaatgcaacttctagtgggatca 444 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaa 470 ||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 445 aagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctgaatggcgcacaa 504 Query: 471 aagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatg 530 ||||| || |||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 505 aagttacttggtatcctgattgcaattggggaagctgtggcatatgttttgtctggaatg 564 Query: 531 tatggcagtgtgagccaacttggaactgggaatgctattctcatcatacttcagcttttc 590 ||||||||||| ||||| ||||||||||| ||||| || ||||| ||||||||||||||| Sbjct: 565 tatggcagtgtaagccagcttggaactggaaatgccatcctcattatacttcagcttttc 624 Query: 591 tttgctggcatcattgtcatctgtct 616 |||||||||||||||||||||||||| Sbjct: 625 tttgctggcatcattgtcatctgtct 650
>gb|BT024137.1| Zea mays clone EL01N0446B05 mRNA sequence Length = 1756 Score = 650 bits (328), Expect = 0.0 Identities = 466/512 (91%) Strand = Plus / Plus Query: 103 cggcccggaagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctt 162 ||||| ||||||||||||||||||| |||| || |||||||||||||| || |||||| Sbjct: 68 cggccgggaagatggctggcggcttcagggtacttcatctggtcaggccctttctggctt 127 Query: 163 tcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctaca 222 ||||||| || |||||||| || |||||||| |||||||| |||||||||| |||||||| Sbjct: 128 tcttgccagaggtgcagagcgcggataggaagataccattcagagaaaaagggatctaca 187 Query: 223 ccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccatt 282 | || ||||||||||||||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 188 ctgttatttctctcttcatttttctggtgtgcagccagctcccactctatggcattcatt 247 Query: 283 cgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggta 342 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 248 cgacgactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgtggca 307 Query: 343 ctgtcatggagctgggtattaccccaattgtgacacctggaatggttatgcaacttctag 402 |||| |||||| |||||||||| ||||||||||| |||| ||||| ||||||||||| | Sbjct: 308 ctgtgatggagttgggtattactccaattgtgacctctggtatggtaatgcaacttcttg 367 Query: 403 tgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatg 462 | ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368 tcggatcgaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctgaatg 427 Query: 463 gtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgt 522 |||||||||||||||| |||||| |||| || ||||||||||||||||||||||| |||| Sbjct: 428 gtgcacaaaagttgcttggtatcttgatcgctattggggaagctgtggcatatgtcctgt 487 Query: 523 ctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcatacttc 582 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 488 ctggaatgtatggtagtgtaagccaacttggaacagggaatgctattctcattatacttc 547 Query: 583 agcttttctttgctggcatcattgtcatctgt 614 |||||||||||||||||||||||||||||||| Sbjct: 548 agcttttctttgctggcatcattgtcatctgt 579
>gb|AY106354.1| Zea mays PCO109407 mRNA sequence Length = 1769 Score = 650 bits (328), Expect = 0.0 Identities = 466/512 (91%) Strand = Plus / Plus Query: 103 cggcccggaagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctt 162 ||||| ||||||||||||||||||| |||| || |||||||||||||| || |||||| Sbjct: 90 cggccgggaagatggctggcggcttcagggtacttcatctggtcaggccctttctggctt 149 Query: 163 tcttgccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctaca 222 ||||||| || |||||||| || |||||||| |||||||| ||||||||||| ||||||| Sbjct: 150 tcttgccagaggtgcagagcgcggataggaagataccattcagagaaaaagttatctaca 209 Query: 223 ccgtcatttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccatt 282 | || ||||||||||||||||| || |||||||| |||||||| ||||||||||| |||| Sbjct: 210 ctgttatttctctcttcatttttctggtgtgcagccagctcccactctatggcattcatt 269 Query: 283 cgaccactggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggta 342 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 270 cgacgactggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgtggca 329 Query: 343 ctgtcatggagctgggtattaccccaattgtgacacctggaatggttatgcaacttctag 402 |||| |||||| |||||||||| ||||||||||| |||| ||||| ||||||||||| | Sbjct: 330 ctgtgatggagttgggtattactccaattgtgacctctggtatggtaatgcaacttcttg 389 Query: 403 tgggatccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatg 462 | ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 390 tcggatcgaagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctgaatg 449 Query: 463 gtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgt 522 |||||||||||||||| |||||| |||| || ||||||||||||||||||||||| |||| Sbjct: 450 gtgcacaaaagttgcttggtatcttgatcgctattggggaagctgtggcatatgtcctgt 509 Query: 523 ctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcatacttc 582 ||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 510 ctggaatgtatggtagtgtaagccaacttggaacagggaatgctattctcattatacttc 569 Query: 583 agcttttctttgctggcatcattgtcatctgt 614 |||||||||||||||||||||||||||||||| Sbjct: 570 agcttttctttgctggcatcattgtcatctgt 601
>gb|AY044237.1| Hordeum vulgare Sec61 alpha subunit mRNA, complete cds Length = 1864 Score = 593 bits (299), Expect = e-166 Identities = 452/503 (89%) Strand = Plus / Plus Query: 114 atggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccggaa 173 ||||||||||| ||| | ||||||||||| |||||||| || ||| |||||| |||||| Sbjct: 122 atggctggcggttttagagtgctgcatcttgtcaggccctttctgggtttcttaccggaa 181 Query: 174 gtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttct 233 || |||||||||||||||| ||| ||||| ||||||||| | |||||||| || ||||| Sbjct: 182 gtacagagtgctgataggagaattccattcagagaaaaactcatctacactgttatttcc 241 Query: 234 ctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactgga 293 |||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 242 ctcttcattttcctagtgtgcagccagctcccgctctatggcatccattcaactactgga 301 Query: 294 gctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggag 353 ||||| |||||||||||| |||||| |||||||||||| |||||||| |||| |||||| Sbjct: 302 gctgaccctttctactggttgcgtgctattcttgcatccaaccgtggatctgttatggag 361 Query: 354 ctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatccaag 413 |||||||| || |||||||||||| |||| ||||| ||||||||||| || ||||| ||| Sbjct: 362 ctgggtatcactccaattgtgacatctgggatggtgatgcaacttctggtaggatcaaag 421 Query: 414 attattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaag 473 || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 422 atcattgaagttgacaacagtgtgagagaggatcgtgcacttctgaatggtgcacaaaag 481 Query: 474 ttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtat 533 ||||| |||||||| ||||| || || |||||||||||||||||| |||||||||||||| Sbjct: 482 ttgcttggtatcctcattgctatcggagaagctgtggcatatgttttgtctggaatgtat 541 Query: 534 ggcagtgtgagccaacttggaactgggaatgctattctcatcatacttcagcttttcttt 593 ||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 542 ggcagtgtgagccaactaggaacagggaatgctattctcattatacttcaacttttcttt 601 Query: 594 gctggcatcattgtcatctgtct 616 ||||||||||||||||||||||| Sbjct: 602 gctggcatcattgtcatctgtct 624
>dbj|AK062070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E03, full insert sequence Length = 1621 Score = 551 bits (278), Expect = e-154 Identities = 377/410 (91%) Strand = Plus / Plus Query: 207 gaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcagctcccg 266 ||||||||||||||||| || ||||| || ||||||||||| || ||||| ||||| || Sbjct: 1 gaaaaagtgatctacactgttatttccctattcattttcctggtatgcagccagctacca 60 Query: 267 ctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgttattctt 326 || |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 61 ctgtatggcatccattcaactactggagctgatcctttctactggatgcgtgttatcctt 120 Query: 327 gcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacacctggaatg 386 |||||||||||||||||||| |||||||||||||| || |||||||||||| |||| ||| Sbjct: 121 gcatcaaaccgtggtactgttatggagctgggtatcactccaattgtgacatctggcatg 180 Query: 387 gttatgcaacttctagtgggatccaagattattgaagtggacaacagtgtgagagaggat 446 || |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 181 gtaatgcaacttctagtgggatcaaagatcattgaagttgacaacagtgtgagagaggat 240 Query: 447 cgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgccattggggaagct 506 ||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||| Sbjct: 241 cgtgctctgctgaatggcgcacaaaagttacttggtatcctgattgcaattggggaagct 300 Query: 507 gtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgct 566 |||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 301 gtggcatatgttttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgcc 360 Query: 567 attctcatcatacttcagcttttctttgctggcatcattgtcatctgtct 616 || ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atcctcattatacttcagcttttctttgctggcatcattgtcatctgtct 410
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 446 bits (225), Expect = e-122 Identities = 312/341 (91%) Strand = Plus / Minus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 ||||||||||| || ||||| || |||||||| |||||||| || |||||||| |||| Sbjct: 10855678 aagatggctggtggttttcgagtactgcatcttgtcaggccctttctggctttcctgcca 10855619 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 10855618 gaagtacagagtgctgataggaaaataccattcagagaaaaagtgatctataccgttatc 10855559 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 ||||||||||||||||| ||||||||||||||||| |||||||| || ||||| || ||| Sbjct: 10855558 tctctcttcattttcctggtgtgcagtcagctcccactctatggaattcattcaactact 10855499 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 10855498 ggagcagatcctttctactggatgcgtgttattcttgcatcaaaccgtggcactgttatg 10855439 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 10855438 gagctgggtattaccccaattgtgacatctggaatggtaatgcaacttctagtgggatca 10855379 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgc 451 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 10855378 aagattattgaagttgacaacagtgtgagagaggaccgtgc 10855338 Score = 438 bits (221), Expect = e-119 Identities = 311/341 (91%) Strand = Plus / Minus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 |||||||||||||| ||||| || |||||||| |||||||| || ||||||||||||| Sbjct: 10865322 aagatggctggcggttttcgagtactgcatcttgtcaggccctttctggctttcttgcca 10865263 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 10865262 gaagtacagagcgctgataggaaaataccattcagagaaaaagtgatctataccgttatc 10865203 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 ||||||||||||||||| |||||||||||||| || |||||||| || || || || ||| Sbjct: 10865202 tctctcttcattttcctggtgtgcagtcagctaccactctatggaattcactcaactact 10865143 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 10865142 ggagcagatcctttctactggatgcgtgttattcttgcttcaaaccgtggtactgttatg 10865083 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 10865082 gagctgggtattaccccaattgtgacatctggaatggtaatgcaacttctagtgggatca 10865023 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgc 451 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 10865022 aagattattgaagttgacaacagtgtgagagaggaccgtgc 10864982 Score = 236 bits (119), Expect = 7e-59 Identities = 149/159 (93%) Strand = Plus / Minus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 10864798 gaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgt 10864739 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 10864738 gctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcat 10864679 Query: 578 acttcagcttttctttgctggcatcattgtcatctgtct 616 || ||||||||||||||||||||||||||||||||||| Sbjct: 10864678 cctccagcttttctttgctggcatcattgtcatctgtct 10864640 Score = 214 bits (108), Expect = 3e-52 Identities = 144/156 (92%) Strand = Plus / Minus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 10855161 gaatggcgcacaaaagctgctgggtatcttgattgctattggggaagctgtggcatatgt 10855102 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 10855101 gctgtctggaatgtatggtagtgtgagccaacttggaactggcaatgccattctcatcat 10855042 Query: 578 acttcagcttttctttgctggcatcattgtcatctg 613 || || ||||||||||||||||||||||| ||||| Sbjct: 10855041 cctacaacttttctttgctggcatcattgttatctg 10855006
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 446 bits (225), Expect = e-122 Identities = 312/341 (91%) Strand = Plus / Minus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 ||||||||||| || ||||| || |||||||| |||||||| || |||||||| |||| Sbjct: 79401 aagatggctggtggttttcgagtactgcatcttgtcaggccctttctggctttcctgcca 79342 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 79341 gaagtacagagtgctgataggaaaataccattcagagaaaaagtgatctataccgttatc 79282 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 ||||||||||||||||| ||||||||||||||||| |||||||| || ||||| || ||| Sbjct: 79281 tctctcttcattttcctggtgtgcagtcagctcccactctatggaattcattcaactact 79222 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 79221 ggagcagatcctttctactggatgcgtgttattcttgcatcaaaccgtggcactgttatg 79162 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 79161 gagctgggtattaccccaattgtgacatctggaatggtaatgcaacttctagtgggatca 79102 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgc 451 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 79101 aagattattgaagttgacaacagtgtgagagaggaccgtgc 79061 Score = 438 bits (221), Expect = e-119 Identities = 311/341 (91%) Strand = Plus / Minus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 |||||||||||||| ||||| || |||||||| |||||||| || ||||||||||||| Sbjct: 89045 aagatggctggcggttttcgagtactgcatcttgtcaggccctttctggctttcttgcca 88986 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 88985 gaagtacagagcgctgataggaaaataccattcagagaaaaagtgatctataccgttatc 88926 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 ||||||||||||||||| |||||||||||||| || |||||||| || || || || ||| Sbjct: 88925 tctctcttcattttcctggtgtgcagtcagctaccactctatggaattcactcaactact 88866 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 88865 ggagcagatcctttctactggatgcgtgttattcttgcttcaaaccgtggtactgttatg 88806 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 88805 gagctgggtattaccccaattgtgacatctggaatggtaatgcaacttctagtgggatca 88746 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgc 451 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 88745 aagattattgaagttgacaacagtgtgagagaggaccgtgc 88705 Score = 236 bits (119), Expect = 7e-59 Identities = 149/159 (93%) Strand = Plus / Minus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 88521 gaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgt 88462 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 88461 gctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcat 88402 Query: 578 acttcagcttttctttgctggcatcattgtcatctgtct 616 || ||||||||||||||||||||||||||||||||||| Sbjct: 88401 cctccagcttttctttgctggcatcattgtcatctgtct 88363 Score = 214 bits (108), Expect = 3e-52 Identities = 144/156 (92%) Strand = Plus / Minus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 78884 gaatggcgcacaaaagctgctgggtatcttgattgctattggggaagctgtggcatatgt 78825 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 78824 gctgtctggaatgtatggtagtgtgagccaacttggaactggcaatgccattctcatcat 78765 Query: 578 acttcagcttttctttgctggcatcattgtcatctg 613 || || ||||||||||||||||||||||| ||||| Sbjct: 78764 cctacaacttttctttgctggcatcattgttatctg 78729
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 438 bits (221), Expect = e-119 Identities = 311/341 (91%) Strand = Plus / Minus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 |||||||||||||| ||||| || |||||||| |||||||| || ||||||||||||| Sbjct: 5027 aagatggctggcggttttcgagtactgcatcttgtcaggccctttctggctttcttgcca 4968 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 4967 gaagtacagagcgctgataggaaaataccattcagagaaaaagtgatctataccgttatc 4908 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 ||||||||||||||||| |||||||||||||| || |||||||| || || || || ||| Sbjct: 4907 tctctcttcattttcctggtgtgcagtcagctaccactctatggaattcactcaactact 4848 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 4847 ggagcagatcctttctactggatgcgtgttattcttgcttcaaaccgtggtactgttatg 4788 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 4787 gagctgggtattaccccaattgtgacatctggaatggtaatgcaacttctagtgggatca 4728 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgc 451 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 4727 aagattattgaagttgacaacagtgtgagagaggaccgtgc 4687 Score = 236 bits (119), Expect = 7e-59 Identities = 149/159 (93%) Strand = Plus / Minus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 4503 gaatggcgcacaaaaattgctgggcatcttgattgctattggggaagctgtggcatatgt 4444 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 4443 gctgtctggaatgtatggcagtgtaagccaacttggaactgggaatgccattctcatcat 4384 Query: 578 acttcagcttttctttgctggcatcattgtcatctgtct 616 || ||||||||||||||||||||||||||||||||||| Sbjct: 4383 cctccagcttttctttgctggcatcattgtcatctgtct 4345
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 436 bits (220), Expect = e-119 Identities = 316/348 (90%) Strand = Plus / Plus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 ||||||||||| |||||| |||| ||||||| ||||||||||| |||||||| |||| Sbjct: 5865396 aagatggctggtggctttagggtattgcatcttgtcaggccttttctggctttcctgcct 5865455 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 5865456 gaagtacagagtgctgataggaaaataccatttagagaaaaagtgatctacactgttatt 5865515 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 || || ||||||||||| || ||||| ||||| || || |||||||||||||| || ||| Sbjct: 5865516 tccctattcattttcctggtatgcagccagctaccactgtatggcatccattcaactact 5865575 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 5865576 ggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgtggtactgttatg 5865635 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||| || |||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 5865636 gagctgggtatcactccaattgtgacatctggcatggtaatgcaacttctagtgggatca 5865695 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctg 458 ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5865696 aagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctg 5865743 Score = 228 bits (115), Expect = 2e-56 Identities = 148/159 (93%) Strand = Plus / Plus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 5865941 gaatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgt 5866000 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 | |||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| || Sbjct: 5866001 tttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattat 5866060 Query: 578 acttcagcttttctttgctggcatcattgtcatctgtct 616 ||||||||||||||||||||||||||||||||||||||| Sbjct: 5866061 acttcagcttttctttgctggcatcattgtcatctgtct 5866099 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccggcggcgtccgcg 104 |||||||||||||||||||| Sbjct: 27163556 cctcgccggcggcgtccgcg 27163575
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 436 bits (220), Expect = e-119 Identities = 316/348 (90%) Strand = Plus / Plus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 ||||||||||| |||||| |||| ||||||| ||||||||||| |||||||| |||| Sbjct: 94226 aagatggctggtggctttagggtattgcatcttgtcaggccttttctggctttcctgcct 94285 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 94286 gaagtacagagtgctgataggaaaataccatttagagaaaaagtgatctacactgttatt 94345 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 || || ||||||||||| || ||||| ||||| || || |||||||||||||| || ||| Sbjct: 94346 tccctattcattttcctggtatgcagccagctaccactgtatggcatccattcaactact 94405 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 94406 ggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgtggtactgttatg 94465 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||| || |||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 94466 gagctgggtatcactccaattgtgacatctggcatggtaatgcaacttctagtgggatca 94525 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctg 458 ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 94526 aagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctg 94573 Score = 228 bits (115), Expect = 2e-56 Identities = 148/159 (93%) Strand = Plus / Plus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 94771 gaatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgt 94830 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 | |||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| || Sbjct: 94831 tttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattat 94890 Query: 578 acttcagcttttctttgctggcatcattgtcatctgtct 616 ||||||||||||||||||||||||||||||||||||||| Sbjct: 94891 acttcagcttttctttgctggcatcattgtcatctgtct 94929
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 436 bits (220), Expect = e-119 Identities = 316/348 (90%) Strand = Plus / Plus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 ||||||||||| |||||| |||| ||||||| ||||||||||| |||||||| |||| Sbjct: 15018 aagatggctggtggctttagggtattgcatcttgtcaggccttttctggctttcctgcct 15077 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 15078 gaagtacagagtgctgataggaaaataccatttagagaaaaagtgatctacactgttatt 15137 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 || || ||||||||||| || ||||| ||||| || || |||||||||||||| || ||| Sbjct: 15138 tccctattcattttcctggtatgcagccagctaccactgtatggcatccattcaactact 15197 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 15198 ggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgtggtactgttatg 15257 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||| || |||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 15258 gagctgggtatcactccaattgtgacatctggcatggtaatgcaacttctagtgggatca 15317 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctg 458 ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 15318 aagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctg 15365 Score = 228 bits (115), Expect = 2e-56 Identities = 148/159 (93%) Strand = Plus / Plus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 15563 gaatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgt 15622 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 | |||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| || Sbjct: 15623 tttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattat 15682 Query: 578 acttcagcttttctttgctggcatcattgtcatctgtct 616 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15683 acttcagcttttctttgctggcatcattgtcatctgtct 15721
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 436 bits (220), Expect = e-119 Identities = 316/348 (90%) Strand = Plus / Plus Query: 111 aagatggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccg 170 ||||||||||| |||||| |||| ||||||| ||||||||||| |||||||| |||| Sbjct: 5864609 aagatggctggtggctttagggtattgcatcttgtcaggccttttctggctttcctgcct 5864668 Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 5864669 gaagtacagagtgctgataggaaaataccatttagagaaaaagtgatctacactgttatt 5864728 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 || || ||||||||||| || ||||| ||||| || || |||||||||||||| || ||| Sbjct: 5864729 tccctattcattttcctggtatgcagccagctaccactgtatggcatccattcaactact 5864788 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 5864789 ggagctgatcctttctactggatgcgtgttatccttgcatcaaaccgtggtactgttatg 5864848 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||||||||| || |||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 5864849 gagctgggtatcactccaattgtgacatctggcatggtaatgcaacttctagtgggatca 5864908 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcgtgctctgctg 458 ||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5864909 aagatcattgaagttgacaacagtgtgagagaggatcgtgctctgctg 5864956 Score = 228 bits (115), Expect = 2e-56 Identities = 148/159 (93%) Strand = Plus / Plus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 5865154 gaatggcgcacaaaagttacttggtatcctgattgcaattggggaagctgtggcatatgt 5865213 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 | |||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| || Sbjct: 5865214 tttgtctggaatgtatggcagtgtaagccagcttggaactggaaatgccatcctcattat 5865273 Query: 578 acttcagcttttctttgctggcatcattgtcatctgtct 616 ||||||||||||||||||||||||||||||||||||||| Sbjct: 5865274 acttcagcttttctttgctggcatcattgtcatctgtct 5865312 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctcgccggcggcgtccgcg 104 |||||||||||||||||||| Sbjct: 27254879 cctcgccggcggcgtccgcg 27254898
>gb|AY093047.1| Arabidopsis thaliana putative protein transport protein SEC61 alpha subunit (At1g29310) mRNA, complete cds Length = 1686 Score = 287 bits (145), Expect = 2e-74 Identities = 397/481 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| | || |||||||| |||||||| ||||| | Sbjct: 117 tgcatttggtgaggccattcttggcttttcttccagaagtgcaaagtgctgacaggaaga 176 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||||||||| |||||||||||||| ||||| || |||||||||||||| || || | Sbjct: 177 ttccatttagagagaaagtgatctacactgtcatctccctcttcattttccttgtttgta 236 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || |||||||| |||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 237 gtcagcttcctctctatgggatccattctaccaccggtgctgatccgttctattggatgc 296 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| ||||| ||||| || ||||| || || |||||||| |||||||| || ||||| | Sbjct: 297 gtgtcattctcgcatcgaatcgtggaacggtgatggagcttggtattactcctattgtca 356 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| ||| || || ||||||||||| || ||||||| || Sbjct: 357 catctggattagtgatgcaactcttagcagggtcaaagattattgaggttgacaacaatg 416 Query: 436 tgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcca 495 | | |||||||||||||| |||||||||| || ||| | || || || |||||||| | Sbjct: 417 ttcgtgaggatcgtgctctcttgaatggtgctcagaagcttcttgggattctgattgcta 476 Query: 496 ttggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaa 555 |||| || ||||| ||||||||||| || ||||||||||| ||| | |||||||| Sbjct: 477 ttggtgaggctgttgcatatgttctttcgggaatgtatggtcctgttggtcaacttggtg 536 Query: 556 ctgggaatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctgtc 615 ||| ||||||||||| ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 537 ttggaaatgctattctgatcatcctccagcttttctttgctggaatcatcgttatctgtc 596 Query: 616 t 616 | Sbjct: 597 t 597
>gb|AY087495.1| Arabidopsis thaliana clone 36037 mRNA, complete sequence Length = 1595 Score = 287 bits (145), Expect = 2e-74 Identities = 397/481 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| | || |||||||| |||||||| ||||| | Sbjct: 119 tgcatttggtgaggccattcttggcttttcttccagaagtgcaaagtgctgacaggaaga 178 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||||||||| |||||||||||||| ||||| || |||||||||||||| || || | Sbjct: 179 ttccatttagagagaaagtgatctacactgtcatctccctcttcattttccttgtttgta 238 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || |||||||| |||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 239 gtcagcttcctctctatgggatccattctaccaccggtgctgatccgttctattggatgc 298 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| ||||| ||||| || ||||| || || |||||||| |||||||| || ||||| | Sbjct: 299 gtgtcattctcgcatcgaatcgtggaacggtgatggagcttggtattactcctattgtca 358 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| ||| || || ||||||||||| || ||||||| || Sbjct: 359 catctggattagtgatgcaactcttagcagggtcaaagattattgaggttgacaacaatg 418 Query: 436 tgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcca 495 | | |||||||||||||| |||||||||| || ||| | || || || |||||||| | Sbjct: 419 ttcgtgaggatcgtgctctcttgaatggtgctcagaagcttcttgggattctgattgcta 478 Query: 496 ttggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaa 555 |||| || ||||| ||||||||||| || ||||||||||| ||| | |||||||| Sbjct: 479 ttggtgaggctgttgcatatgttctttcgggaatgtatggtcctgttggtcaacttggtt 538 Query: 556 ctgggaatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctgtc 615 ||| ||||||||||| ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 539 ttggaaatgctattctgatcatcctccagcttttctttgctggaatcatcgttatctgtc 598 Query: 616 t 616 | Sbjct: 599 t 599
>ref|NM_001036399.1| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.2 mRNA, complete cds Length = 1961 Score = 274 bits (138), Expect = 3e-70 Identities = 393/478 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| |||| || || ||||||||||||||||| Sbjct: 260 tgcatttggtgaggccattcttggcttttctgcctgaggttcagagtgctgataggaagg 319 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||| ||||| || || |||||||| ||||| ||||||||||| || || || |||| Sbjct: 320 ttccattcagagagaaggttatctacactgtcatctctctcttcatctttcttgtctgca 379 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || || ||||| |||||||| ||||| || || ||||| ||||| ||||||| Sbjct: 380 gtcagcttcctctttatggaatccattccaccaccggtgcggatccattctattggatgc 439 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| |||||||| || |||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 440 gtgtcattcttgcgtccaaccgtggaactgtcatggagctcggtattactcctattgtta 499 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| | | || |||||||||||||| || ||||||| || Sbjct: 500 catctggacttgtgatgcaactcttggctggttccaagattattgaggttgacaacaatg 559 Query: 436 tgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcca 495 | | ||||||||||| || |||||||||| || ||| | || ||||| |||||||||| Sbjct: 560 ttcgtgaggatcgtgccctcttgaatggtgctcagaagcttctaggtattctgattgcca 619 Query: 496 ttggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaa 555 |||| || ||||| ||||||||||| |||||||||||||| || | || ||||| Sbjct: 620 ttggtgaggctgttgcatatgttctttctggaatgtatggtcccgttggacagcttggtg 679 Query: 556 ctgggaatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctg 613 ||| ||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 680 ttggaaatgccattctgatcatccttcagcttttctttgctggaatcattgttatctg 737
>ref|NM_128976.2| Arabidopsis thaliana protein translocase AT2G34250 transcript variant AT2G34250.1 mRNA, complete cds Length = 1882 Score = 274 bits (138), Expect = 3e-70 Identities = 393/478 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| |||| || || ||||||||||||||||| Sbjct: 187 tgcatttggtgaggccattcttggcttttctgcctgaggttcagagtgctgataggaagg 246 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||| ||||| || || |||||||| ||||| ||||||||||| || || || |||| Sbjct: 247 ttccattcagagagaaggttatctacactgtcatctctctcttcatctttcttgtctgca 306 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || || ||||| |||||||| ||||| || || ||||| ||||| ||||||| Sbjct: 307 gtcagcttcctctttatggaatccattccaccaccggtgcggatccattctattggatgc 366 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| |||||||| || |||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 367 gtgtcattcttgcgtccaaccgtggaactgtcatggagctcggtattactcctattgtta 426 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| | | || |||||||||||||| || ||||||| || Sbjct: 427 catctggacttgtgatgcaactcttggctggttccaagattattgaggttgacaacaatg 486 Query: 436 tgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcca 495 | | ||||||||||| || |||||||||| || ||| | || ||||| |||||||||| Sbjct: 487 ttcgtgaggatcgtgccctcttgaatggtgctcagaagcttctaggtattctgattgcca 546 Query: 496 ttggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaa 555 |||| || ||||| ||||||||||| |||||||||||||| || | || ||||| Sbjct: 547 ttggtgaggctgttgcatatgttctttctggaatgtatggtcccgttggacagcttggtg 606 Query: 556 ctgggaatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctg 613 ||| ||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 607 ttggaaatgccattctgatcatccttcagcttttctttgctggaatcattgttatctg 664
>gb|BT000507.1| Arabidopsis thaliana endoplasmic reticulum insertion protein (At2g34250/F13P17.9) mRNA, complete cds Length = 1428 Score = 274 bits (138), Expect = 3e-70 Identities = 393/478 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| |||| || || ||||||||||||||||| Sbjct: 23 tgcatttggtgaggccattcttggcttttctgcctgaggttcagagtgctgataggaagg 82 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||| ||||| || || |||||||| ||||| ||||||||||| || || || |||| Sbjct: 83 ttccattcagagagaaggttatctacactgtcatctctctcttcatctttcttgtctgca 142 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || || ||||| |||||||| ||||| || || ||||| ||||| ||||||| Sbjct: 143 gtcagcttcctctttatggaatccattccaccaccggtgcggatccattctattggatgc 202 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| |||||||| || |||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 203 gtgtcattcttgcgtccaaccgtggaactgtcatggagctcggtattactcctattgtta 262 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| | | || |||||||||||||| || ||||||| || Sbjct: 263 catctggacttgtgatgcaactcttggctggttccaagattattgaggttgacaacaatg 322 Query: 436 tgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcca 495 | | ||||||||||| || |||||||||| || ||| | || ||||| |||||||||| Sbjct: 323 ttcgtgaggatcgtgccctcttgaatggtgctcagaagcttctaggtattctgattgcca 382 Query: 496 ttggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaa 555 |||| || ||||| ||||||||||| |||||||||||||| || | || ||||| Sbjct: 383 ttggtgaggctgttgcatatgttctttctggaatgtatggtcccgttggacagcttggtg 442 Query: 556 ctgggaatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctg 613 ||| ||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 443 ttggaaatgccattctgatcatccttcagcttttctttgctggaatcattgttatctg 500
>gb|AF367298.1| Arabidopsis thaliana At2g34250/F13P17.9 mRNA, complete cds Length = 1804 Score = 274 bits (138), Expect = 3e-70 Identities = 393/478 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| |||| || || ||||||||||||||||| Sbjct: 161 tgcatttggtgaggccattcttggcttttctgcctgaggttcagagtgctgataggaagg 220 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||| ||||| || || |||||||| ||||| ||||||||||| || || || |||| Sbjct: 221 ttccattcagagagaaggttatctacactgtcatctctctcttcatctttcttgtctgca 280 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || || ||||| |||||||| ||||| || || ||||| ||||| ||||||| Sbjct: 281 gtcagcttcctctttatggaatccattccaccaccggtgcggatccattctattggatgc 340 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| |||||||| || |||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 341 gtgtcattcttgcgtccaaccgtggaactgtcatggagctcggtattactcctattgtta 400 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| | | || |||||||||||||| || ||||||| || Sbjct: 401 catctggacttgtgatgcaactcttggctggttccaagattattgaggttgacaacaatg 460 Query: 436 tgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcca 495 | | ||||||||||| || |||||||||| || ||| | || ||||| |||||||||| Sbjct: 461 ttcgtgaggatcgtgccctcttgaatggtgctcagaagcttctaggtattctgattgcca 520 Query: 496 ttggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaa 555 |||| || ||||| ||||||||||| |||||||||||||| || | || ||||| Sbjct: 521 ttggtgaggctgttgcatatgttctttctggaatgtatggtcccgttggacagcttggtg 580 Query: 556 ctgggaatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctg 613 ||| ||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 581 ttggaaatgccattctgatcatccttcagcttttctttgctggaatcattgttatctg 638
>gb|AY088235.1| Arabidopsis thaliana clone 4598 mRNA, complete sequence Length = 1821 Score = 274 bits (138), Expect = 3e-70 Identities = 393/478 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| |||| || || ||||||||||||||||| Sbjct: 187 tgcatttggtgaggccattcttggcttttctgcctgaggttcagagtgctgataggaagg 246 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||| ||||| || || |||||||| ||||| ||||||||||| || || || |||| Sbjct: 247 ttccattcagagagaaggttatctacactgtcatctctctcttcatctttcttgtctgca 306 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || || ||||| |||||||| ||||| || || ||||| ||||| ||||||| Sbjct: 307 gtcagcttcctctttatggaatccattccaccaccggtgcggatccattctattggatgc 366 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| |||||||| || |||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 367 gtgtcattcttgcgtccaaccgtggaactgtcatggagctcggtattactcctattgtta 426 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| | | || |||||||||||||| || ||||||| || Sbjct: 427 catctggacttgtgatgcaactcttggctggttccaagattattgaggttgacaacaatg 486 Query: 436 tgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcca 495 | | ||||||||||| || |||||||||| || ||| | || ||||| |||||||||| Sbjct: 487 ttcgtgaggatcgtgccctcttgaatggtgctcagaagcttctaggtattctgattgcca 546 Query: 496 ttggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaa 555 |||| || ||||| ||||||||||| |||||||||||||| || | || ||||| Sbjct: 547 ttggtgaggctgttgcatatgttctttctggaatgtatggtcccgttggacagcttggtg 606 Query: 556 ctgggaatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctg 613 ||| ||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 607 ttggaaatgccattctgatcatccttcagcttttctttgctggaatcattgttatctg 664
>ref|NM_102671.2| Arabidopsis thaliana protein translocase AT1G29310 mRNA, complete cds Length = 1688 Score = 272 bits (137), Expect = 1e-69 Identities = 395/481 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| | || |||||||| |||||||| ||||| | Sbjct: 119 tgcatttggtgaggccattcttggcttttcttccagaagtgcaaagtgctgacaggaaga 178 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||||||||| |||||||||||||| ||||| || |||||||||||||| || || | Sbjct: 179 ttccatttagagagaaagtgatctacactgtcatctccctcttcattttccttgtttgta 238 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || |||||||| |||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 239 gtcagcttcctctctatgggatccattctaccaccggtgctgatccgttctattggatgc 298 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| ||||| ||||| || ||||| || || |||||||| |||||||| || ||||| | Sbjct: 299 gtgtcattctcgcatcgaatcgtggaacggtgatggagcttggtattactcctattgtca 358 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| ||| || || ||||||||||| || ||||||| || Sbjct: 359 catctggattagtgatgcaactcttagcagggtcaaagattattgaggttgacaacaatg 418 Query: 436 tgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcca 495 | | |||||||||||||| |||||||||| || ||| | || | || |||| ||| | Sbjct: 419 ttcgtgaggatcgtgctctcttgaatggtgctcagaagcttctttggattctgagtgcta 478 Query: 496 ttggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaa 555 |||| || ||||| ||||||||||| || ||||||||||| ||| | |||||||| Sbjct: 479 ttggtgaggctgttgcatatgttctttcgggaatgtatggtcctgttggtcaacttggtg 538 Query: 556 ctgggaatgctattctcatcatacttcagcttttctttgctggcatcattgtcatctgtc 615 ||| ||||||||||| ||||| || ||||||||||||||||| ||||| || ||||||| Sbjct: 539 ttggaaatgctattctgatcatcctccagcttttctttgctggaatcatcgttatctgtc 598 Query: 616 t 616 | Sbjct: 599 t 599
>emb|BX821829.1|CNS0A807 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL78ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1831 Score = 230 bits (116), Expect = 4e-57 Identities = 378/464 (81%), Gaps = 1/464 (0%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| |||| || || ||||||||||||||||| Sbjct: 170 tgcatttggtgaggccattcttggcttttctgcctgaggttcagagtgctgataggaagg 229 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||| ||||| || || |||||||| ||||| ||||||||||| || || || |||| Sbjct: 230 ttccattcagagagaaggttatctacactgtcatctctctcttcatctttcttgtctgca 289 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || || ||||| |||||||| ||||| || || ||||| ||||| ||||||| Sbjct: 290 gtcagcttcctctttatggaatccattccaccaccggtgcggatccattctattggatgc 349 Query: 316 g-tgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtg 374 | ||| |||||||| || |||||||| |||||||||||||| |||||||| || ||||| Sbjct: 350 gttgtcattcttgcgtccaaccgtggaactgtcatggagctcggtattactcctattgtt 409 Query: 375 acacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagt 434 ||| ||||| | || |||||||| | | || ||||||||||||| || ||||||| | Sbjct: 410 acatctggacttgtgatgcaactcttggctggtcccaagattattgaggttgacaacaat 469 Query: 435 gtgagagaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgcc 494 || | |||||| |||| || |||||||||| || ||| | || ||||| ||||||||| Sbjct: 470 gttcgtgaggattgtgccctcttgaatggtgctcagaagcttctaggtattctgattgcc 529 Query: 495 attggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttgga 554 ||||| || ||||| ||||||||||| |||||||||||||| || | || ||||| Sbjct: 530 attggtgaggctgttgcatatgttctttctggaatgtatggtcccgttggacagcttggt 589 Query: 555 actgggaatgctattctcatcatacttcagcttttctttgctgg 598 ||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 590 gttggaaatgccattctgatcatccttcagcttttctttgctgg 633
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete sequence Length = 154716 Score = 212 bits (107), Expect = 1e-51 Identities = 266/319 (83%) Strand = Plus / Minus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| | || |||||||| |||||||| ||||| | Sbjct: 10706 tgcatttggtgaggccattcttggcttttcttccagaagtgcaaagtgctgacaggaaga 10647 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||||||||| |||||||||||||| ||||| || |||||||||||||| || || | Sbjct: 10646 ttccatttagagagaaagtgatctacactgtcatctccctcttcattttccttgtttgta 10587 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || |||||||| |||||||| ||||| || |||||||| ||||| ||||||| Sbjct: 10586 gtcagcttcctctctatgggatccattctaccaccggtgctgatccgttctattggatgc 10527 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| ||||| ||||| || ||||| || || |||||||| |||||||| || ||||| | Sbjct: 10526 gtgtcattctcgcatcgaatcgtggaacggtgatggagcttggtattactcctattgtca 10467 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| ||| || || ||||||||||| || ||||||| || Sbjct: 10466 catctggattagtgatgcaactcttagcagggtcaaagattattgaggttgacaacaatg 10407 Query: 436 tgagagaggatcgtgctct 454 | | |||||||||||||| Sbjct: 10406 ttcgtgaggatcgtgctct 10388 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 486 ctgattgccattggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagc 545 |||| ||| ||||| || ||||| ||||||||||| || ||||||||||| ||| | Sbjct: 10283 ctgagtgctattggtgaggctgttgcatatgttctttcgggaatgtatggtcctgttggt 10224 Query: 546 caacttggaactgggaatgctattctcatcatacttcagcttttctttgctggcatcatt 605 |||||||| ||| ||||||||||| ||||| || ||||||||||||||||| ||||| Sbjct: 10223 caacttggtgttggaaatgctattctgatcatcctccagcttttctttgctggaatcatc 10164 Query: 606 gtcatctgtct 616 || |||||||| Sbjct: 10163 gttatctgtct 10153
>gb|AF190652.1|AF190652 Phaseolus vulgaris putative integral membrane protein (sec61) mRNA, sec61-1 allele, complete cds Length = 2150 Score = 204 bits (103), Expect = 2e-49 Identities = 316/387 (81%) Strand = Plus / Plus Query: 168 ccggaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtc 227 |||||||| |||| |||||| |||||| | ||||||||||| || || || || || || Sbjct: 100 ccggaagttcagactgctgacaggaaagtgccatttagagagaaggtcatatatactgtg 159 Query: 228 atttctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgacc 287 || ||||| |||||||| ||||| |||||||||||||| || ||||| || || || || Sbjct: 160 atctctctgttcatttttctcgtttgcagtcagctccctctgtatggaattcactctaca 219 Query: 288 actggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtc 347 |||||||| ||||| ||||| |||||||||||||| ||||| ||||||||||| ||||| Sbjct: 220 actggagcagatccattctattggatgcgtgttatccttgcttcaaaccgtggaactgtt 279 Query: 348 atggagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtggga 407 |||||||| || || ||||| ||||| || |||| |||| |||||||| | | || Sbjct: 280 atggagctaggaataacccccattgttacttctgggctggtaatgcaactcttggctggg 339 Query: 408 tccaagattattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgca 467 || ||||| |||||||||||||||| |||| | |||||||| ||||| | ||||||||| Sbjct: 340 tcaaagataattgaagtggacaacaatgtgcgggaggatcgagctctcttaaatggtgca 399 Query: 468 caaaagttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctgga 527 || ||| | || || ||| |||| || ||||| || || || ||||||||||| ||||| Sbjct: 400 cagaagctacttggcatcttgatagctattggtgaggcagttgcatatgttctatctggg 459 Query: 528 atgtatggcagtgtgagccaacttgga 554 |||||||| |||||| ||||||||||| Sbjct: 460 atgtatggtagtgtgggccaacttgga 486
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 190 bits (96), Expect = 4e-45 Identities = 261/316 (82%) Strand = Plus / Plus Query: 136 tgcatctggtcaggcctttcttggctttcttgccggaagtgcagagtgctgataggaaaa 195 ||||| |||| ||||| ||||||||||| |||| || || ||||||||||||||||| Sbjct: 33144 tgcatttggtgaggccattcttggcttttctgcctgaggttcagagtgctgataggaagg 33203 Query: 196 taccatttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgca 255 | ||||| ||||| || || |||||||| ||||| ||||||||||| || || || |||| Sbjct: 33204 ttccattcagagagaaggttatctacactgtcatctctctcttcatctttcttgtctgca 33263 Query: 256 gtcagctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgc 315 ||||||| || || ||||| |||||||| ||||| || || ||||| ||||| ||||||| Sbjct: 33264 gtcagcttcctctttatggaatccattccaccaccggtgcggatccattctattggatgc 33323 Query: 316 gtgttattcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtga 375 |||| |||||||| || |||||||| |||||||||||||| |||||||| || ||||| | Sbjct: 33324 gtgtcattcttgcgtccaaccgtggaactgtcatggagctcggtattactcctattgtta 33383 Query: 376 cacctggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtg 435 || ||||| | || |||||||| | | || |||||||||||||| || ||||||| || Sbjct: 33384 catctggacttgtgatgcaactcttggctggttccaagattattgaggttgacaacaatg 33443 Query: 436 tgagagaggatcgtgc 451 | | ||||||||||| Sbjct: 33444 ttcgtgaggatcgtgc 33459 Score = 95.6 bits (48), Expect = 2e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 ||||||||| || ||| | || ||||| |||||||||||||| || ||||| |||||||| Sbjct: 33623 gaatggtgctcagaagcttctaggtattctgattgccattggtgaggctgttgcatatgt 33682 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 ||| |||||||||||||| || | || ||||| ||| ||||| ||||| ||||| Sbjct: 33683 tctttctggaatgtatggtcccgttggacagcttggtgttggaaatgccattctgatcat 33742 Query: 578 acttcagcttttctttgctggcatcattgtcatctg 613 |||||||||||||||||||| |||||||| ||||| Sbjct: 33743 ccttcagcttttctttgctggaatcattgttatctg 33778
>dbj|AK062048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A12, full insert sequence Length = 1375 Score = 180 bits (91), Expect = 4e-42 Identities = 118/127 (92%) Strand = Plus / Plus Query: 487 tgattgccattggggaagctgtggcatatgttctgtctggaatgtatggcagtgtgagcc 546 ||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1 tgattgctattggggaagctgtggcatatgtgctgtctggaatgtatggtagtgtgagcc 60 Query: 547 aacttggaactgggaatgctattctcatcatacttcagcttttctttgctggcatcattg 606 ||||||||||||| ||||| ||||||||||| || || |||||||||||||||||||||| Sbjct: 61 aacttggaactggcaatgccattctcatcatcctacaacttttctttgctggcatcattg 120 Query: 607 tcatctg 613 | ||||| Sbjct: 121 ttatctg 127
>gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete sequence Length = 119718 Score = 139 bits (70), Expect = 1e-29 Identities = 226/278 (81%) Strand = Plus / Plus Query: 171 gaagtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatt 230 ||||| |||| |||||| |||||| | ||||||||||| || || || || || || || Sbjct: 26518 gaagttcagactgctgacaggaaagtgccatttagagagaaggtcatatatactgtgatc 26577 Query: 231 tctctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccact 290 ||||| ||||||||| | || ||||||||||| || || ||||| || || ||||| || Sbjct: 26578 tctcttttcattttcttggtctgcagtcagcttcctctatatgggatacactcgacaaca 26637 Query: 291 ggagctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatg 350 || || ||||| ||||| |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 26638 ggtgcagatccgttctattggatgcgtgttatccttgcttcaaaccgtggaactgtcatg 26697 Query: 351 gagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtgggatcc 410 ||||| || || || || ||||| || |||| | || ||||| ||| | | ||||| Sbjct: 26698 gagcttggaatcactcctattgtcacttctgggctcgtcatgcagcttttggctggatca 26757 Query: 411 aagattattgaagtggacaacagtgtgagagaggatcg 448 |||||||||||||||||||||| |||| |||||||||| Sbjct: 26758 aagattattgaagtggacaacaatgtgcgagaggatcg 26795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 513 tatgttctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctc 572 |||||||| || || |||||||| |||||| ||||||||||| ||| |||||||| ||| Sbjct: 27324 tatgttctttcagggatgtatggtagtgtgggccaacttggagttggaaatgctatcctc 27383 Query: 573 atcat 577 ||||| Sbjct: 27384 atcat 27388
>ref|NM_106519.1| Arabidopsis thaliana protein translocase AT1G78720 mRNA, complete cds Length = 1428 Score = 131 bits (66), Expect = 3e-27 Identities = 306/386 (79%) Strand = Plus / Plus Query: 201 tttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcag 260 |||||||| ||||| || ||||| || || ||||||||||| ||| | || || ||||| Sbjct: 88 tttagagagaaagtcatatacactgtgatctctctcttcatcttcttggtttgtagtcaa 147 Query: 261 ctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgtt 320 | || || ||||| |||||||| || || || || ||||| ||||| |||||||| || Sbjct: 148 ttgccactttatggaatccattccactacaggcgcggatccattctattggatgcgcgtc 207 Query: 321 attcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacacct 380 |||||||| |||| ||| |||||||| |||||||| |||||||| ||||| || || | Sbjct: 208 attcttgcttcaagccgaggtactgttatggagcttggtattacaccaatcgtcacctcc 267 Query: 381 ggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtgtgaga 440 |||||||||||||| ||||| | || |||||||| |||||| | || |||| ||| | Sbjct: 268 ggaatggttatgcagcttcttgctggttccaagatcattgaaatcgataacaatgtccgt 327 Query: 441 gaggatcgtgctctgctgaatggtgcacaaaagttgctgggtatcctgattgccattggg 500 || || ||||| || ||||||||||||| ||| || |||| ||||| || || |||| Sbjct: 328 gaagaccgtgcactcttgaatggtgcacagaagctgttgggaatcctcatcgcggttggc 387 Query: 501 gaagctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaactggg 560 |||| || ||||||||||| ||||| |||||||| ||||| | |||| ||| ||| Sbjct: 388 caagcagttgcatatgttctctctgggatgtatggtagtgttggggaactaggagttggt 447 Query: 561 aatgctattctcatcatacttcagct 586 ||||||||||| |||||| ||||||| Sbjct: 448 aatgctattcttatcatagttcagct 473
>gb|AC121241.32| Medicago truncatula clone mth2-4n3, complete sequence Length = 114591 Score = 99.6 bits (50), Expect = 1e-17 Identities = 203/254 (79%) Strand = Plus / Minus Query: 201 tttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcag 260 |||||||| || || ||||| || || || || ||||||||||| || || || |||||| Sbjct: 26000 tttagagagaaggtcatctatacggtgatctccctcttcatttttcttgtttgtagtcag 25941 Query: 261 ctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgtt 320 || || || ||||| || || ||||| || || || ||||| ||||| |||||||||||| Sbjct: 25940 cttcctctgtatggaatacactcgacaacaggtgcagatccattctattggatgcgtgtt 25881 Query: 321 attcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacacct 380 || ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| || || Sbjct: 25880 atccttgcttcaaaccgtggaactgttatggagcttggaatcacccccattgtcacttct 25821 Query: 381 ggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtgtgaga 440 ||| | || ||||| ||| | | || || ||||| |||||||| ||||||| ||| | Sbjct: 25820 ggacttgtaatgcagcttttggctggttctaagatcattgaagtcgacaacaatgtccgc 25761 Query: 441 gaggatcgtgctct 454 |||||||||||||| Sbjct: 25760 gaggatcgtgctct 25747 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 504 gctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaactgggaat 563 ||||| || |||||||| |||||||||||||| ||||| |||| |||||| || ||| Sbjct: 25576 gctgttgcctatgttctttctggaatgtatggtagtgtaggccagcttggagtgggaaat 25517 Query: 564 gctattctcatcatacttcagcttttctttgctggcatcattgtcatctgtctaga 619 || || || ||||| || ||||| || ||||| || ||||||||||| ||| |||| Sbjct: 25516 gccatccttatcatcctccagctcttttttgccggtatcattgtcatatgtttaga 25461
>gb|AC146749.23| Medicago truncatula clone mth2-145a1, complete sequence Length = 130793 Score = 99.6 bits (50), Expect = 1e-17 Identities = 203/254 (79%) Strand = Plus / Plus Query: 201 tttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcag 260 |||||||| || || ||||| || || || || ||||||||||| || || || |||||| Sbjct: 108801 tttagagagaaggtcatctatacggtgatctccctcttcatttttcttgtttgtagtcag 108860 Query: 261 ctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgtt 320 || || || ||||| || || ||||| || || || ||||| ||||| |||||||||||| Sbjct: 108861 cttcctctgtatggaatacactcgacaacaggtgcagatccattctattggatgcgtgtt 108920 Query: 321 attcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacacct 380 || ||||| ||||||||||| ||||| |||||||| || || ||||| ||||| || || Sbjct: 108921 atccttgcttcaaaccgtggaactgttatggagcttggaatcacccccattgtcacttct 108980 Query: 381 ggaatggttatgcaacttctagtgggatccaagattattgaagtggacaacagtgtgaga 440 ||| | || ||||| ||| | | || || ||||| |||||||| ||||||| ||| | Sbjct: 108981 ggacttgtaatgcagcttttggctggttctaagatcattgaagtcgacaacaatgtccgc 109040 Query: 441 gaggatcgtgctct 454 |||||||||||||| Sbjct: 109041 gaggatcgtgctct 109054 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 504 gctgtggcatatgttctgtctggaatgtatggcagtgtgagccaacttggaactgggaat 563 ||||| || |||||||| |||||||||||||| ||||| |||| |||||| || ||| Sbjct: 109225 gctgttgcctatgttctttctggaatgtatggtagtgtaggccagcttggagtgggaaat 109284 Query: 564 gctattctcatcatacttcagcttttctttgctggcatcattgtcatctgtctaga 619 || || || ||||| || ||||| || ||||| || ||||||||||| ||| |||| Sbjct: 109285 gccatccttatcatcctccagctcttttttgccggtatcattgtcatatgtttaga 109340
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 99.6 bits (50), Expect = 1e-17 Identities = 179/222 (80%) Strand = Plus / Minus Query: 201 tttagagaaaaagtgatctacaccgtcatttctctcttcattttcctcgtgtgcagtcag 260 |||||||| ||||| || ||||| || || ||||||||||| ||| | || || ||||| Sbjct: 72173 tttagagagaaagtcatatacactgtgatctctctcttcatcttcttggtttgtagtcaa 72114 Query: 261 ctcccgctctatggcatccattcgaccactggagctgatcctttctactggatgcgtgtt 320 | || || ||||| |||||||| || || || || ||||| ||||| |||||||| || Sbjct: 72113 ttgccactttatggaatccattccactacaggcgcggatccattctattggatgcgcgtc 72054 Query: 321 attcttgcatcaaaccgtggtactgtcatggagctgggtattaccccaattgtgacacct 380 |||||||| |||| ||| |||||||| |||||||| |||||||| ||||| || || | Sbjct: 72053 attcttgcttcaagccgaggtactgttatggagcttggtattacaccaatcgtcacctcc 71994 Query: 381 ggaatggttatgcaacttctagtgggatccaagattattgaa 422 |||||||||||||| ||||| | || |||||||| |||||| Sbjct: 71993 ggaatggttatgcagcttcttgctggttccaagatcattgaa 71952 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Minus Query: 458 gaatggtgcacaaaagttgctgggtatcctgattgccattggggaagctgtggcatatgt 517 |||||||||||| ||| || |||| ||||| || || |||| |||| || |||||||| Sbjct: 71824 gaatggtgcacagaagctgttgggaatcctcatcgcggttggccaagcagttgcatatgt 71765 Query: 518 tctgtctggaatgtatggcagtgtgagccaacttggaactgggaatgctattctcatcat 577 ||| ||||| |||||||| ||||| | |||| ||| ||| ||||||||||| ||||| Sbjct: 71764 tctctctgggatgtatggtagtgttggggaactaggagttggtaatgctattcttatcat 71705 Query: 578 acttcagct 586 | ||||||| Sbjct: 71704 agttcagct 71696
>ref|XM_756242.1| Ustilago maydis 521 hypothetical protein (UM05188.1) partial mRNA Length = 1398 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 304 tctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctgggtat 361 |||||||||||||||||||||| || |||||||||||||| | |||||||| ||||| Sbjct: 149 tctactggatgcgtgttattctcgcctcaaaccgtggtacgctgatggagctcggtat 206
>ref|XM_424024.1| PREDICTED: Gallus gallus similar to Sec61 alpha isoform 2 (LOC426369), partial mRNA Length = 2070 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaac 335 |||||||||||||||||||| || ||||||||||||||| Sbjct: 371 gatcctttctactggatgcgagtcattcttgcatcaaac 409
>emb|CR405768.1| Gallus gallus finished cDNA, clone ChEST884d22 Length = 870 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaac 335 |||||||||||||||||||| || ||||||||||||||| Sbjct: 226 gatcctttctactggatgcgagtcattcttgcatcaaac 264
>emb|BX929982.2| Gallus gallus finished cDNA, clone ChEST769e24 Length = 1081 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaac 335 |||||||||||||||||||| || ||||||||||||||| Sbjct: 184 gatcctttctactggatgcgagtcattcttgcatcaaac 222
>ref|XM_875170.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 11 (LOC614128), mRNA Length = 2468 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_875091.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 10 (LOC614128), mRNA Length = 2477 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_875004.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 9 (LOC614128), mRNA Length = 2474 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874932.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 8 (LOC614128), mRNA Length = 2492 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874850.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 7 (LOC614128), mRNA Length = 2474 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874762.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 6 (LOC614128), mRNA Length = 2477 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874677.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 5 (LOC614128), mRNA Length = 2282 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874591.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 4 (LOC614128), mRNA Length = 2165 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_874505.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 3 (LOC614128), mRNA Length = 1412 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>ref|XM_864860.1| PREDICTED: Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1 (LOC614128), mRNA Length = 2480 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 315 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 374 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 375 ggtatctccccaattgtaacatctgg 400
>gb|BC112848.1| Bos taurus similar to Sec61, alpha subunit 2, transcript variant 1, mRNA (cDNA clone MGC:137488 IMAGE:8168173), complete cds Length = 1924 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 288 gatcctttctactggatgagagttattcttgcatccaacagaggaactttaatggaattg 347 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 348 ggtatctccccaattgtaacatctgg 373
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence Length = 164973 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 82198 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 82257 Query: 357 ggtat 361 ||||| Sbjct: 82258 ggtat 82262
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence Length = 214621 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 5863 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 5922 Query: 357 ggtat 361 ||||| Sbjct: 5923 ggtat 5927
>dbj|AB062670.1| Drosophila melanogaster mRNA for DSec61alpha, complete cds Length = 1984 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 266 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 325 Query: 357 ggtat 361 ||||| Sbjct: 326 ggtat 330
>ref|NM_135190.3| Drosophila melanogaster Sec61 CG9539-RA (Sec61alpha), mRNA Length = 2046 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 337 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 396 Query: 357 ggtat 361 ||||| Sbjct: 397 ggtat 401
>gb|AY069569.1| Drosophila melanogaster LD29847 full length cDNA Length = 1652 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 283 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 342 Query: 357 ggtat 361 ||||| Sbjct: 343 ggtat 347
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete sequence Length = 280095 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| ||||||||||| ||||| || || || || ||||||||||| ||||||||||| Sbjct: 262009 gatcccttctactggatccgtgtgatcctggcctccaaccgtggtacgctcatggagctg 261950 Query: 357 ggtat 361 ||||| Sbjct: 261949 ggtat 261945
>ref|XM_535191.2| PREDICTED: Canis familiaris similar to Sec61, alpha subunit 2 (LOC478007), mRNA Length = 2026 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||||||||| |||||| | |||||||||||||| ||| | || ||| | ||||| || Sbjct: 403 gatcctttctattggatgagagttattcttgcatccaacagaggaactttaatggaattg 462 Query: 357 ggtattaccccaattgtgacacctgg 382 ||||| |||||||||| ||| |||| Sbjct: 463 ggtatctccccaattgtaacatctgg 488
>ref|XM_341558.2| PREDICTED: Rattus norvegicus Sec61, alpha subunit 2 (S. cerevisiae) (predicted) (Sec61a2_predicted), mRNA Length = 2169 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 380 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 439 Query: 357 ggtattaccccaattgtgacacctgg 382 |||||| |||||||||| ||| |||| Sbjct: 440 ggtatttccccaattgtaacatctgg 465
>ref|NM_021305.2| Mus musculus Sec61, alpha subunit 2 (S. cerevisiae) (Sec61a2), mRNA Length = 2369 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 268 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 327 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 328 ggtatttccccaattgt 344
>gb|BC005458.1| Mus musculus Sec61, alpha subunit 2 (S. cerevisiae), mRNA (cDNA clone MGC:6359 IMAGE:3494001), complete cds Length = 2139 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 211 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 270 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 271 ggtatttccccaattgt 287
>dbj|AK136447.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030227K22 product:Sec61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 1304 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 247 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 306 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 307 ggtatttccccaattgt 323
>dbj|AK161316.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930402A17 product:Sec61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 563 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 347 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 406 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 407 ggtatttccccaattgt 423
>dbj|AK160602.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610019K07 product:Sec61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2362 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 254 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 313 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 314 ggtatttccccaattgt 330
>dbj|AK077701.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730536E22 product:SEC61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2369 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 268 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 327 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 328 ggtatttccccaattgt 344
>dbj|AK017615.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730434P03 product:SEC61, alpha subunit 2 (S. cerevisiae), full insert sequence Length = 2111 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 250 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 309 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 310 ggtatttccccaattgt 326
>gb|AF222748.1|AF222748 Mus musculus Sec61 alpha-2 mRNA, complete cds Length = 1488 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 205 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 264 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 265 ggtatttccccaattgt 281
>gb|AF145254.1|AF145254 Mus musculus Sec61 alpha isoform 2 mRNA, complete cds Length = 1487 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | |||||||||||||| ||| | || || | ||||| || Sbjct: 204 gatcccttctactggatgagagttattcttgcatccaacagaggaacattgatggaattg 263 Query: 357 ggtattaccccaattgt 373 |||||| |||||||||| Sbjct: 264 ggtatttccccaattgt 280
>gb|AY613855.1| Oikopleura dioica clone BACOIKO007 10xi11, complete sequence Length = 104968 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Plus Query: 293 agctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtact 344 ||||||||| || |||||||| || |||||||| || || |||||||||||| Sbjct: 12715 agctgatcccttttactggatccgagttattctcgcttccaaccgtggtact 12766
>ref|NM_070392.3| Caenorhabditis elegans Y57G11C.15 (Y57G11C.15) mRNA, complete cds Length = 1811 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagct 355 ||||| ||||||||| | ||||||||| | || || |||||||||||| | |||||||| Sbjct: 262 gatccattctactggcttcgtgttattatggcttccaaccgtggtactcttatggagct 320
>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence Length = 313573 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagct 355 ||||| ||||||||| | ||||||||| | || || |||||||||||| | |||||||| Sbjct: 186974 gatccattctactggcttcgtgttattatggcttccaaccgtggtactcttatggagct 186916
>emb|AL928924.12| Mouse DNA sequence from clone RP23-307E15 on chromosome 2, complete sequence Length = 195936 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 297 gatcctttctactggatgcgtgttattcttgcatc 331 ||||| |||||||||||| | |||||||||||||| Sbjct: 100487 gatcccttctactggatgagagttattcttgcatc 100453
>ref|NM_001004374.1| Gallus gallus hemoglobin, zeta (HBZ), mRNA Length = 429 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 484 tcctgattgccattggggaagctgtg 509 |||||| ||||||||||||||||||| Sbjct: 188 tcctgaatgccattggggaagctgtg 213
>gb|AY298909.1| Trypanosoma cruzi cosmid C2 mucin-like protein and gp85-like protein (gp-85) genes, complete cds; and unknown genes Length = 30331 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 attttcctcgtgtgcagtcagc 261 |||||||||||||||||||||| Sbjct: 7980 attttcctcgtgtgcagtcagc 7959
>gb|AY016020.1| Gallus gallus alpha globin gene cluster, complete sequence Length = 103190 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 484 tcctgattgccattggggaagctgtg 509 |||||| ||||||||||||||||||| Sbjct: 47081 tcctgaatgccattggggaagctgtg 47106
>ref|XM_799853.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511565.15) partial mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 attttcctcgtgtgcagtcagc 261 |||||||||||||||||||||| Sbjct: 565 attttcctcgtgtgcagtcagc 586
>ref|XM_801313.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511611.11) partial mRNA Length = 720 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 attttcctcgtgtgcagtcagc 261 |||||||||||||||||||||| Sbjct: 238 attttcctcgtgtgcagtcagc 259
>ref|XM_816611.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508873.130) partial mRNA Length = 546 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 attttcctcgtgtgcagtcagc 261 |||||||||||||||||||||| Sbjct: 241 attttcctcgtgtgcagtcagc 262
>ref|XM_812768.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506499.120) partial mRNA Length = 549 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 attttcctcgtgtgcagtcagc 261 |||||||||||||||||||||| Sbjct: 244 attttcctcgtgtgcagtcagc 265
>ref|XM_814632.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506763.210) partial mRNA Length = 549 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 attttcctcgtgtgcagtcagc 261 |||||||||||||||||||||| Sbjct: 244 attttcctcgtgtgcagtcagc 265
>emb|V00408.1|GGGL01 Gallus gallus gene coding for embryonic alpha-globin pi-prime Length = 1836 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 484 tcctgattgccattggggaagctgtg 509 |||||| ||||||||||||||||||| Sbjct: 1147 tcctgaatgccattggggaagctgtg 1172
>gb|AC153517.8| Mus musculus 10 BAC RP23-22E18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203981 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 342 actgtcatggagctgggtatta 363 |||||||||||||||||||||| Sbjct: 141251 actgtcatggagctgggtatta 141230
>emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 in linkage group 11, complete sequence Length = 179563 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 454 tgctgaatggtgcacaaaagtt 475 |||||||||||||||||||||| Sbjct: 81367 tgctgaatggtgcacaaaagtt 81346
>gb|AF098919.2| Gallus gallus embryonic alpha-type globin pi, adult alpha D globin, and adult alpha A globin genes, complete cds Length = 29615 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 484 tcctgattgccattggggaagctgtg 509 |||||| ||||||||||||||||||| Sbjct: 18575 tcctgaatgccattggggaagctgtg 18600
>dbj|AK144316.1| Mus musculus adult male vesicular gland cDNA, RIKEN full-length enriched library, clone:G630018F13 product:unclassifiable, full insert sequence Length = 1154 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 tttcgggtgctgcatctggtca 147 |||||||||||||||||||||| Sbjct: 68 tttcgggtgctgcatctggtca 89
>emb|CR387670.1| Gallus gallus finished cDNA, clone ChEST660l10 Length = 626 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 484 tcctgattgccattggggaagctgtg 509 |||||| ||||||||||||||||||| Sbjct: 400 tcctgaatgccattggggaagctgtg 375
>gb|AF279458.1|AF279458 Mus musculus Ran-binding protein 2 gene, complete cds Length = 57752 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 tttcgggtgctgcatctggtca 147 |||||||||||||||||||||| Sbjct: 8203 tttcgggtgctgcatctggtca 8182
>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216621 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 tttcgggtgctgcatctggtca 147 |||||||||||||||||||||| Sbjct: 21020 tttcgggtgctgcatctggtca 20999
>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 226168 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 tttcgggtgctgcatctggtca 147 |||||||||||||||||||||| Sbjct: 23895 tttcgggtgctgcatctggtca 23874
>gb|AC172304.2| Gallus gallus BAC clone CH261-75C12 from chromosome ul, complete sequence Length = 227366 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 484 tcctgattgccattggggaagctgtg 509 |||||| ||||||||||||||||||| Sbjct: 93085 tcctgaatgccattggggaagctgtg 93060
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 cccgcccacctcgccggcggcg 98 |||||||||||||||||||||| Sbjct: 1020278 cccgcccacctcgccggcggcg 1020257
>gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233119 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 gtgctgataggaaaataccatt 202 |||||||||||||||||||||| Sbjct: 38655 gtgctgataggaaaataccatt 38676
>emb|AL953861.5| Zebrafish DNA sequence from clone CH211-132C16, complete sequence Length = 165789 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 586 ttttctttgctggcatcattgt 607 |||||||||||||||||||||| Sbjct: 132145 ttttctttgctggcatcattgt 132166
>emb|AL713985.10| Mouse DNA sequence from clone RP23-104K14 on chromosome 10, complete sequence Length = 199286 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 gtgctgataggaaaataccatt 202 |||||||||||||||||||||| Sbjct: 58195 gtgctgataggaaaataccatt 58174
>gb|AC167117.5| Mus musculus chromosome 1, clone RP24-73D23, complete sequence Length = 166651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 catttctctcttcattttcct 247 ||||||||||||||||||||| Sbjct: 149219 catttctctcttcattttcct 149239
>ref|XM_507657.1| PREDICTED: Pan troglodytes similar to Sec61 alpha isoform 2 (LOC450305), mRNA Length = 1714 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattct 325 |||||||||||||||||| | |||||||| Sbjct: 287 gatcctttctactggatgagagttattct 315
>gb|BC074553.1| Xenopus tropicalis MGC69436 protein, mRNA (cDNA clone MGC:69436 IMAGE:5335742), complete cds Length = 1986 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gctgatcctttctactggatg 314 ||||||||||||||||||||| Sbjct: 249 gctgatcctttctactggatg 269
>gb|AC150557.1| Drosophila melanogaster clone BACR06K04, complete sequence Length = 170918 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 tttctctcttcattttcctcg 249 ||||||||||||||||||||| Sbjct: 129890 tttctctcttcattttcctcg 129910
>ref|NM_018144.2| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae) (SEC61A2), mRNA Length = 1892 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattct 325 |||||||||||||||||| | |||||||| Sbjct: 266 gatcctttctactggatgagagttattct 294
>gb|DQ155538.1| Hepatitis C virus strain D61 NS5b protein gene, partial cds Length = 342 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 gaatgtatggcagtgtgagcc 546 ||||||||||||||||||||| Sbjct: 83 gaatgtatggcagtgtgagcc 63
>gb|BC094530.1| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:105264 IMAGE:7320508), complete cds Length = 3061 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 293 agctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatgga 352 |||||| || |||||||||||||| || ||||| || || ||| | ||||| | ||||| Sbjct: 281 agctgaccccttctactggatgcgagtgattctggcctctaacagaggtaccttgatgga 340 Query: 353 gctgggtat 361 ||||||||| Sbjct: 341 gctgggtat 349
>emb|CR733665.2|CNS0GSVK Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR712203.2|CNS0GCHJ Tetraodon nigroviridis full-length cDNA Length = 512 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR711691.2|CNS0GC3B Tetraodon nigroviridis full-length cDNA Length = 518 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>gb|BC045117.1| Xenopus laevis protein transport protein SEC61 alpha subunit isoform 1, mRNA (cDNA clone MGC:53497 IMAGE:5572471), complete cds Length = 1894 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gctgatcctttctactggatg 314 ||||||||||||||||||||| Sbjct: 255 gctgatcctttctactggatg 275
>emb|CR723239.2|CNS0GKZX Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR722653.2|CNS0GKJN Tetraodon nigroviridis full-length cDNA Length = 354 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR722350.2|CNS0GKB8 Tetraodon nigroviridis full-length cDNA Length = 513 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 77 gcctttcttggctttcttgcc 57
>emb|CR721624.2|CNS0GJR2 Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR719698.2|CNS0GI9K Tetraodon nigroviridis full-length cDNA Length = 513 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 77 gcctttcttggctttcttgcc 57
>emb|CR718801.2|CNS0GHKN Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR717706.2|CNS0GGQ8 Tetraodon nigroviridis full-length cDNA Length = 450 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR716616.2|CNS0GFW1 Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR714892.2|CNS0GEK8 Tetraodon nigroviridis full-length cDNA Length = 440 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR714887.2|CNS0GEK3 Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR714613.2|CNS0GECH Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR714502.2|CNS0GE9E Tetraodon nigroviridis full-length cDNA Length = 450 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR713099.2|CNS0GD6F Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR710254.2|CNS0GAZE Tetraodon nigroviridis full-length cDNA Length = 443 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 73 gcctttcttggctttcttgcc 53
>emb|CR710215.2|CNS0GAYB Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR709269.2|CNS0GA81 Tetraodon nigroviridis full-length cDNA Length = 914 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 548 gcctttcttggctttcttgcc 528
>emb|CR708837.2|CNS0G9W1 Tetraodon nigroviridis full-length cDNA Length = 440 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR708471.2|CNS0G9LV Tetraodon nigroviridis full-length cDNA Length = 517 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR708374.2|CNS0G9J6 Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR708139.2|CNS0G9CN Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR707909.2|CNS0G969 Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR706032.2|CNS0G7Q4 Tetraodon nigroviridis full-length cDNA Length = 412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 46 gcctttcttggctttcttgcc 26
>emb|CR706964.2|CNS0G8G0 Tetraodon nigroviridis full-length cDNA Length = 450 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR705706.2|CNS0G7H2 Tetraodon nigroviridis full-length cDNA Length = 512 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR704175.2|CNS0G6AJ Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR702930.2|CNS0G5BY Tetraodon nigroviridis full-length cDNA Length = 450 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR691332.2|CNS0FWDS Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR699365.2|CNS0G2KX Tetraodon nigroviridis full-length cDNA Length = 412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 46 gcctttcttggctttcttgcc 26
>emb|CR693533.2|CNS0FY2X Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR693349.2|CNS0FXXT Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR690219.2|CNS0FVIV Tetraodon nigroviridis full-length cDNA Length = 450 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR689912.2|CNS0FVAC Tetraodon nigroviridis full-length cDNA Length = 439 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 73 gcctttcttggctttcttgcc 53
>emb|CR689474.2|CNS0FUY6 Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR689467.2|CNS0FUXZ Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR689353.2|CNS0FUUT Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR685565.2|CNS0FRXL Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, complete sequence Length = 136723 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 aaaataccatttagagaaaaa 212 ||||||||||||||||||||| Sbjct: 3584 aaaataccatttagagaaaaa 3564
>emb|CR683575.2|CNS0FQEB Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR678765.2|CNS0FMOP Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR675911.2|CNS0FKI5 Tetraodon nigroviridis full-length cDNA Length = 513 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR675551.2|CNS0FK85 Tetraodon nigroviridis full-length cDNA Length = 677 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR673377.2|CNS0FIJR Tetraodon nigroviridis full-length cDNA Length = 511 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR668519.2|CNS0FEST Tetraodon nigroviridis full-length cDNA Length = 512 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR668420.2|CNS0FEQ2 Tetraodon nigroviridis full-length cDNA Length = 662 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR663361.2|CNS0FATJ Tetraodon nigroviridis full-length cDNA Length = 511 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR656082.2|CNS0F57C Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR655181.2|CNS0F4IB Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR654772.2|CNS0F46Y Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR652911.2|CNS0F2R9 Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR652220.2|CNS0F282 Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR651740.2|CNS0F1UQ Tetraodon nigroviridis full-length cDNA Length = 438 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 74 gcctttcttggctttcttgcc 54
>emb|CR651713.2|CNS0F1TZ Tetraodon nigroviridis full-length cDNA Length = 443 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 77 gcctttcttggctttcttgcc 57
>emb|CR650742.2|CNS0F130 Tetraodon nigroviridis full-length cDNA Length = 412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 46 gcctttcttggctttcttgcc 26
>emb|CR650164.2|CNS0F0MY Tetraodon nigroviridis full-length cDNA Length = 440 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR649252.2|CNS0EZXM Tetraodon nigroviridis full-length cDNA Length = 406 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 40 gcctttcttggctttcttgcc 20
>emb|CR645101.2|CNS0EWQB Tetraodon nigroviridis full-length cDNA Length = 446 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 80 gcctttcttggctttcttgcc 60
>emb|CR642832.2|CNS0EUZA Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR642818.2|CNS0EUYW Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR642551.2|CNS0EURH Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR642330.2|CNS0EULC Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR640292.2|CNS0ET0Q Tetraodon nigroviridis full-length cDNA Length = 443 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>ref|NM_199256.2| Rattus norvegicus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA Length = 3061 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 293 agctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatgga 352 |||||| || |||||||||||||| || ||||| || || ||| | ||||| | ||||| Sbjct: 281 agctgaccccttctactggatgcgagtgattctggcctctaacagaggtaccttgatgga 340 Query: 353 gctgggtat 361 ||||||||| Sbjct: 341 gctgggtat 349
>emb|CR638006.2|CNS0ER98 Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR637975.2|CNS0ER8D Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR637956.2|CNS0ER7U Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR635944.2|CNS0EPNY Tetraodon nigroviridis full-length cDNA Length = 512 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR635670.2|CNS0EPGC Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR635102.2|CNS0EP0K Tetraodon nigroviridis full-length cDNA Length = 443 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 77 gcctttcttggctttcttgcc 57
>emb|CR634835.2|CNS0EOT5 Tetraodon nigroviridis full-length cDNA Length = 444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 78 gcctttcttggctttcttgcc 58
>emb|CR634648.2|CNS0EONY Tetraodon nigroviridis full-length cDNA Length = 441 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 75 gcctttcttggctttcttgcc 55
>emb|CR632749.2|CNS0EN77 Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR631192.2|CNS0ELZX Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR631768.2|CNS0EMFY Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|CR631752.2|CNS0EMFI Tetraodon nigroviridis full-length cDNA Length = 442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gcctttcttggctttcttgcc 169 ||||||||||||||||||||| Sbjct: 76 gcctttcttggctttcttgcc 56
>emb|AL353616.14| Human DNA sequence from clone RP11-274B18 on chromosome 9 Contains the 3' end of the PGM5 gene for phosphoglucomutase 5 (PGMRP), a novel gene (MGC34760), a squamous cell carcinoma antigen recognized by T cell (SART2) pseudogene and 2 novel genes, complete sequence Length = 169993 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 tgataggaaaataccatttagagaa 209 |||||||||||||||||||| |||| Sbjct: 141653 tgataggaaaataccatttaaagaa 141677
>gb|AY113841.1| Dissostichus mawsoni Sec61 (SEC61) mRNA, complete cds Length = 1441 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | || ||||| || |||||| | ||||| | |||||||| Sbjct: 178 gatcctttctactggatgagagtcattctggcctcaaacagaggtaccctgatggagctc 237 Query: 357 ggtat 361 ||||| Sbjct: 238 ggtat 242
>gb|AY113840.1| Harpagifer antarcticus Sec61 (SEC61) mRNA, complete cds Length = 1453 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 |||||||||||||||||| | || ||||| || |||||| | ||||| | |||||||| Sbjct: 200 gatcctttctactggatgagagtcattctggcctcaaacagaggtaccctgatggagctc 259 Query: 357 ggtat 361 ||||| Sbjct: 260 ggtat 264
>gb|AY103475.1| Gadus ogac Sec61-alpha mRNA, complete cds Length = 2483 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | || || || || || ||| | |||||| ||||||||||| Sbjct: 284 gatccattctactggatgagagtaatcctggcttccaacagaggtactctcatggagctg 343 Query: 357 ggtat 361 ||||| Sbjct: 344 ggtat 348
>gb|AY103474.1| Boreogadus saida Sec61-alpha mRNA, complete cds Length = 2472 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggagctg 356 ||||| |||||||||||| | || || || || || ||| | |||||| ||||||||||| Sbjct: 264 gatcccttctactggatgagagtaatcctggcttccaacagaggtactctcatggagctg 323 Query: 357 ggtat 361 ||||| Sbjct: 324 ggtat 328
>ref|XM_965057.1| PREDICTED: Tribolium castaneum similar to CG9539-PA (LOC658693), mRNA Length = 1943 Score = 42.1 bits (21), Expect = 2.1 Identities = 63/77 (81%) Strand = Plus / Plus Query: 348 atggagctgggtattaccccaattgtgacacctggaatggttatgcaacttctagtggga 407 |||||| |||||||| |||| ||||| || | ||| || ||||||||||||||| ||| Sbjct: 377 atggagttgggtatttccccgattgttacttccggattgattatgcaacttctagcagga 436 Query: 408 tccaagattattgaagt 424 | ||||| |||||||| Sbjct: 437 gcgaagataattgaagt 453
>gb|BC026179.1| Homo sapiens Sec61 alpha 2 subunit (S. cerevisiae), mRNA (cDNA clone MGC:32910 IMAGE:4823130), complete cds Length = 2220 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattct 325 |||||||||||||||||| | |||||||| Sbjct: 275 gatcctttctactggatgagagttattct 303
>gb|M96630.1|RATSEC61B Rattus sp. sec61-like protein mRNA, complete cds Length = 1738 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 293 agctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatgga 352 |||||| || |||||||||||||| || ||||| || || ||| | ||||| | ||||| Sbjct: 272 agctgaccccttctactggatgcgagtgattctggcctctaacagaggtaccttgatgga 331 Query: 353 gctgggtat 361 ||||||||| Sbjct: 332 gctgggtat 340
>gb|AC109352.3| Homo sapiens BAC clone RP11-489P20 from 4, complete sequence Length = 157443 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 gctgcatctggtcaggcctttcttg 158 |||||||||||||||| |||||||| Sbjct: 96021 gctgcatctggtcagggctttcttg 95997
>dbj|AK057532.1| Homo sapiens cDNA FLJ32970 fis, clone TESTI2008840, highly similar to PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT Length = 2305 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattct 325 |||||||||||||||||| | |||||||| Sbjct: 399 gatcctttctactggatgagagttattct 427
>ref|NM_001004801.2| Xenopus tropicalis MGC69436 protein (MGC69436), mRNA Length = 2352 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gctgatcctttctactggatg 314 ||||||||||||||||||||| Sbjct: 244 gctgatcctttctactggatg 264
>dbj|AK022640.1| Homo sapiens cDNA FLJ12578 fis, clone NT2RM4001054, moderately similar to Homo sapiens sec61 homolog mRNA Length = 2026 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattct 325 |||||||||||||||||| | |||||||| Sbjct: 260 gatcctttctactggatgagagttattct 288
>gb|AC073160.8| Homo sapiens chromosome 10 clone RP11-348G8, complete sequence Length = 189817 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattct 325 |||||||||||||||||| | |||||||| Sbjct: 140035 gatcctttctactggatgagagttattct 140063
>gb|AC099309.1| Drosophila melanogaster, chromosome 4, region 101C-101D, BAC clone BACR16H06, complete sequence Length = 157561 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 tttctctcttcattttcctcg 249 ||||||||||||||||||||| Sbjct: 44639 tttctctcttcattttcctcg 44619
>gb|AC010576.16| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACR30L15, complete sequence Length = 175192 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 tttctctcttcattttcctcg 249 ||||||||||||||||||||| Sbjct: 160519 tttctctcttcattttcctcg 160539
>gb|AF346603.1|AF346603 Homo sapiens Sec61 alpha form 2 mRNA, complete cds Length = 1893 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattct 325 |||||||||||||||||| | |||||||| Sbjct: 266 gatcctttctactggatgagagttattct 294
>gb|AC122764.12| Mus musculus chromosome 15, clone RP24-93B16, complete sequence Length = 209493 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcatttctctcttcattttcc 246 ||||||||||||||||||||| Sbjct: 49425 tcatttctctcttcattttcc 49405
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 gcccacctcgccggcggcgtccgcg 104 |||||||||||||||| |||||||| Sbjct: 7283474 gcccacctcgccggcgtcgtccgcg 7283450
>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds Length = 80367 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 297 gatcctttctactggatgcgtgttattcttgcatcaaaccg 337 |||||||||||||||||| | || ||||| || |||||||| Sbjct: 15061 gatcctttctactggatgagagtaattctggcttcaaaccg 15021
>emb|CR848298.2| Xenopus tropicalis finished cDNA, clone TNeu057c05 Length = 2352 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gctgatcctttctactggatg 314 ||||||||||||||||||||| Sbjct: 244 gctgatcctttctactggatg 264
>gb|AE003843.5| Drosophila melanogaster chromosome 4, section 3 of 5 of the complete sequence Length = 328561 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 tttctctcttcattttcctcg 249 ||||||||||||||||||||| Sbjct: 272858 tttctctcttcattttcctcg 272878
>gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, complete sequence Length = 201383 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 catttctctcttcattttcct 247 ||||||||||||||||||||| Sbjct: 108829 catttctctcttcattttcct 108809
>dbj|AB046850.1| Homo sapiens mRNA for KIAA1630 protein, partial cds Length = 5275 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 297 gatcctttctactggatgcgtgttattct 325 |||||||||||||||||| | |||||||| Sbjct: 2865 gatcctttctactggatgagagttattct 2893
>gb|AC149328.2| Phakopsora pachyrhizi clone JGIAFNA-13C16, complete sequence Length = 36270 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ctcgccggcggcgtccgcgg 105 |||||||||||||||||||| Sbjct: 16342 ctcgccggcggcgtccgcgg 16323
>ref|XM_509707.1| PREDICTED: Pan troglodytes similar to FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1; chondrocyte-derived ezrin-like protein (LOC452632), mRNA Length = 6224 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cagctcccgctctatggcat 277 |||||||||||||||||||| Sbjct: 4072 cagctcccgctctatggcat 4091
>ref|XM_467865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1662 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgcccacctcgccggcggcg 98 |||||||||||||||||||| Sbjct: 877 cgcccacctcgccggcggcg 858
>ref|XM_506981.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.27 mRNA Length = 2591 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgcccacctcgccggcggcg 98 |||||||||||||||||||| Sbjct: 874 cgcccacctcgccggcggcg 855
>ref|NM_196738.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0094K20.13), mRNA Length = 915 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgcccacctcgccggcggcg 98 |||||||||||||||||||| Sbjct: 107 cgcccacctcgccggcggcg 126
>ref|NM_192683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2322 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 ccccgcccacctcgccggcggcgt 99 ||||||||||||||||| |||||| Sbjct: 256 ccccgcccacctcgccgacggcgt 233
>ref|NM_005766.2| Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) (FARP1), transcript variant 1, mRNA Length = 5028 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cagctcccgctctatggcat 277 |||||||||||||||||||| Sbjct: 2746 cagctcccgctctatggcat 2765
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 gattattgaagtggacaaca 432 |||||||||||||||||||| Sbjct: 61931 gattattgaagtggacaaca 61950
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccacctcgccggcggcgtcc 101 |||||||||||||||||||| Sbjct: 105063 ccacctcgccggcggcgtcc 105082
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccggcggcgtccgcg 104 |||||||||||||||||||| Sbjct: 140839 cctcgccggcggcgtccgcg 140820
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 tgggtatcctgattgccatt 497 |||||||||||||||||||| Sbjct: 88612 tgggtatcctgattgccatt 88631
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cctcgccggcggcgtccgcg 104 |||||||||||||||||||| Sbjct: 15335 cctcgccggcggcgtccgcg 15316
>ref|XM_367756.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07667.4) partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 cctcgccagcccgcggcgaa 73 |||||||||||||||||||| Sbjct: 306 cctcgccagcccgcggcgaa 287
>ref|XM_848718.1| PREDICTED: Canis familiaris similar to Laminin alpha-5 chain precursor (LOC611084), partial mRNA Length = 1384 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cccccgcccacctcgccggc 94 |||||||||||||||||||| Sbjct: 1317 cccccgcccacctcgccggc 1298
>emb|BX936436.13| Zebrafish DNA sequence from clone DKEY-16H19 in linkage group 6, complete sequence Length = 200434 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 atgtatggcagtgtgagcca 547 |||||||||||||||||||| Sbjct: 64530 atgtatggcagtgtgagcca 64511
>ref|XM_739092.1| Plasmodium chabaudi chabaudi Pfsec61 (PC000811.01.0) partial mRNA Length = 1413 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 296 tgatcctttctactggatgcgtgttattcttgcatcaaac 335 |||||| || || ||||||||||||||| | ||||||||| Sbjct: 171 tgatccgttttattggatgcgtgttattttagcatcaaac 210
>ref|XM_816912.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508221.350) partial mRNA Length = 1044 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tttcctcgtgtgcagtcagc 261 |||||||||||||||||||| Sbjct: 564 tttcctcgtgtgcagtcagc 583
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence Length = 177066 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 gacaacagtgtgagagagga 445 |||||||||||||||||||| Sbjct: 162300 gacaacagtgtgagagagga 162319
>gb|AC121778.1| Mus musculus BAC clone RP23-359J6 from 1, complete sequence Length = 205069 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcatttctctcttcattttc 245 |||||||||||||||||||| Sbjct: 127689 tcatttctctcttcattttc 127708
>ref|XM_725300.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02510) partial mRNA Length = 1560 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 296 tgatcctttctactggatgcgtgttattcttgcatcaaac 335 |||||| || || ||||||||||||||| | ||||||||| Sbjct: 315 tgatccgttttattggatgcgtgttattttagcatcaaac 354
>ref|XM_663982.1| Plasmodium berghei strain ANKA hypothetical protein (PB301116.00.0) partial mRNA Length = 459 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 296 tgatcctttctactggatgcgtgttattcttgcatcaaac 335 |||||| || || ||||||||||||||| | ||||||||| Sbjct: 171 tgatccgttttattggatgcgtgttattttagcatcaaac 210
>gb|AF125953.2| Caenorhabditis elegans cosmid F53E2, complete sequence Length = 11756 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 tctcttcattttcctcgtgt 252 |||||||||||||||||||| Sbjct: 7090 tctcttcattttcctcgtgt 7109
>gb|AC142341.1| Pan troglodytes BAC clone RP43-43C1 from 7, complete sequence Length = 132532 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gtgagccaacttggaactgg 559 |||||||||||||||||||| Sbjct: 24156 gtgagccaacttggaactgg 24137
>gb|AC136506.10| Medicago truncatula clone mth2-33c8, complete sequence Length = 135457 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 catttctctcttcattttcctcgt 250 |||||||||||||| ||||||||| Sbjct: 123941 catttctctcttcaatttcctcgt 123918
>emb|AL355343.18| Human DNA sequence from clone RP11-455I14 on chromosome 6 Contains the 5' end of the TIAM2 gene for T-cell lymphoma invasion and metastasis 2 (SIF and Tiam 1-like exchange factor (STEF)), complete sequence Length = 179262 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 tgattgccattggggaagctgtgg 510 |||||||||||||||||| ||||| Sbjct: 39045 tgattgccattggggaaggtgtgg 39068
>emb|AL137249.29| Human DNA sequence from clone RP11-111L24 on chromosome 13q31.3-32.3 Contains the 3' end of the FARP1 gene for (chondrocyte-derived) FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1, a novel gene and the 3' end of the STK24 gene for serine/threonine kinase 24, complete sequence Length = 106578 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cagctcccgctctatggcat 277 |||||||||||||||||||| Sbjct: 45431 cagctcccgctctatggcat 45450
>gb|BC071592.1| Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived), mRNA (cDNA clone MGC:87400 IMAGE:30342239), complete cds Length = 4932 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cagctcccgctctatggcat 277 |||||||||||||||||||| Sbjct: 2742 cagctcccgctctatggcat 2761
>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the 5' end of the Dbccr1 gene for deleted in bladder cancer 1, complete sequence Length = 186197 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tttctctcttcattttcctc 248 |||||||||||||||||||| Sbjct: 173913 tttctctcttcattttcctc 173932
>gb|AE005970.1| Caulobacter crescentus CB15 section 296 of 359 of the complete genome Length = 12680 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cgccggcggcgtccgcggcc 107 |||||||||||||||||||| Sbjct: 8333 cgccggcggcgtccgcggcc 8314
>gb|AC087240.17| Homo sapiens 12p BAC RP11-752F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198068 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 tacttcagcttttctttgct 596 |||||||||||||||||||| Sbjct: 46314 tacttcagcttttctttgct 46295
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 catggagctgggtattaccc 366 |||||||||||||||||||| Sbjct: 1935947 catggagctgggtattaccc 1935928
>gb|AC172375.3| Pan troglodytes BAC clone CH251-541M22 from chromosome unknown, complete sequence Length = 207989 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcatttctctcttcattttc 245 |||||||||||||||||||| Sbjct: 92300 tcatttctctcttcattttc 92281
>gb|AF410771.1|AF410771 Homo sapiens C1q-related factor (CRF) gene, complete cds Length = 10184 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccccgctccgtcctcccctc 39 |||||||||||||||||||| Sbjct: 886 ccccgctccgtcctcccctc 905
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 tgggtatcctgattgccatt 497 |||||||||||||||||||| Sbjct: 26965168 tgggtatcctgattgccatt 26965187 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gcccacctcgccggcggcgtccgc 103 |||||| ||||||||||||||||| Sbjct: 26650750 gcccacgtcgccggcggcgtccgc 26650727 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 cgcccacctcgccggcggcgtccgcggc 106 ||||||||||||||||| || ||||||| Sbjct: 20905386 cgcccacctcgccggcgccggccgcggc 20905413
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccacctcgccggcggcgtcc 101 |||||||||||||||||||| Sbjct: 19236275 ccacctcgccggcggcgtcc 19236294
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgcccacctcgccggcggcg 98 |||||||||||||||||||| Sbjct: 15625957 cgcccacctcgccggcggcg 15625976
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccacctcgccggcggcgtcc 101 |||||||||||||||||||| Sbjct: 4337880 ccacctcgccggcggcgtcc 4337899
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgcccacctcgccggcggcg 98 |||||||||||||||||||| Sbjct: 31811220 cgcccacctcgccggcggcg 31811239
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 ccccgcccacctcgccggcggcgt 99 ||||||||||||||||| |||||| Sbjct: 23850340 ccccgcccacctcgccgacggcgt 23850363
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgcccacctcgccggcggcg 98 |||||||||||||||||||| Sbjct: 113323 cgcccacctcgccggcggcg 113342
>gb|AC009312.4| Homo sapiens BAC clone RP11-425F6 from 2, complete sequence Length = 204834 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcatttctctcttcattttc 245 |||||||||||||||||||| Sbjct: 87842 tcatttctctcttcattttc 87823
>gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, complete sequence Length = 212775 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 caggcctttcttggctttcttgcc 169 |||| ||||||||||||||||||| Sbjct: 198873 cagggctttcttggctttcttgcc 198896
>ref|XM_224535.3| PREDICTED: Rattus norvegicus FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) (predicted) (Farp1_predicted), mRNA Length = 5754 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cagctcccgctctatggcat 277 |||||||||||||||||||| Sbjct: 4423 cagctcccgctctatggcat 4442
>gb|AC015936.14| Homo sapiens chromosome 17, clone CTD-2534I21, complete sequence Length = 203401 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccccgctccgtcctcccctc 39 |||||||||||||||||||| Sbjct: 143178 ccccgctccgtcctcccctc 143159
>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176910 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 caggcctttcttggctttcttgcc 169 |||| ||||||||||||||||||| Sbjct: 90554 cagggctttcttggctttcttgcc 90577
>gb|AC160651.2| Pan troglodytes BAC clone CH251-489P13 from chromosome unknown, complete sequence Length = 209305 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcatttctctcttcattttc 245 |||||||||||||||||||| Sbjct: 195260 tcatttctctcttcattttc 195241
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ccacctcgccggcggcgtcc 101 |||||||||||||||||||| Sbjct: 29460 ccacctcgccggcggcgtcc 29479
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 ccccgcccacctcgccggcggcgt 99 ||||||||||||||||| |||||| Sbjct: 130925 ccccgcccacctcgccgacggcgt 130948
>gb|AF238483.1|AF238483 Hepatitis C virus 2a polyprotein gene, complete cds Length = 9416 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 gaatgtatggcagtgtgagc 545 |||||||||||||||||||| Sbjct: 8396 gaatgtatggcagtgtgagc 8377
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgcccacctcgccggcggcg 98 |||||||||||||||||||| Sbjct: 107018 cgcccacctcgccggcggcg 107037
>dbj|AK111608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102J06, full insert sequence Length = 896 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 cgcccacctcgccggcggcgtccgcggc 106 ||||||||||||||||| || ||||||| Sbjct: 58 cgcccacctcgccggcgccggccgcggc 85 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,483,701 Number of Sequences: 3902068 Number of extensions: 5483701 Number of successful extensions: 112588 Number of sequences better than 10.0: 264 Number of HSP's better than 10.0 without gapping: 265 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 111064 Number of HSP's gapped (non-prelim): 1505 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
