Clone Name | bart25h08 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_186625.2| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 474 bits (239), Expect = e-130 Identities = 290/307 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 146 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 205 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 206 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 265 Query: 287 cccctccaaggtgacccccgaggcgcacttcgagaaggatctgggtctggacagcctgga 346 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 266 cccctccaaggtgagtcccgaggcgcacttcgagaaggatctggggctggacagcctgga 325 Query: 347 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgacttgga 406 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 326 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgaccagga 385 Query: 407 ggccgacaagatcaactcgcttccgctcgccatcgagtacgttgccaaccaccccatggc 466 ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 386 ggccgacaagatcgactccctcccgctcgccatcgagtacgtcgccaaccaccccatggc 445 Query: 467 cggctga 473 || |||| Sbjct: 446 cgcctga 452 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| ||||||||| Sbjct: 57 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcctctccccc 110
>ref|XM_507357.1| PREDICTED Oryza sativa (japonica cultivar-group), P0592C06.117 mRNA Length = 664 Score = 474 bits (239), Expect = e-130 Identities = 290/307 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 148 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 207 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 208 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 267 Query: 287 cccctccaaggtgacccccgaggcgcacttcgagaaggatctgggtctggacagcctgga 346 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 268 cccctccaaggtgagtcccgaggcgcacttcgagaaggatctggggctggacagcctgga 327 Query: 347 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgacttgga 406 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 328 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgaccagga 387 Query: 407 ggccgacaagatcaactcgcttccgctcgccatcgagtacgttgccaaccaccccatggc 466 ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 388 ggccgacaagatcgactccctcccgctcgccatcgagtacgtcgccaaccaccccatggc 447 Query: 467 cggctga 473 || |||| Sbjct: 448 cgcctga 454 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| ||||||||| Sbjct: 59 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcctctccccc 112
>ref|XM_506226.2| PREDICTED Oryza sativa (japonica cultivar-group), P0592C06.117 mRNA Length = 689 Score = 474 bits (239), Expect = e-130 Identities = 290/307 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 173 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 232 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 233 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 292 Query: 287 cccctccaaggtgacccccgaggcgcacttcgagaaggatctgggtctggacagcctgga 346 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 293 cccctccaaggtgagtcccgaggcgcacttcgagaaggatctggggctggacagcctgga 352 Query: 347 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgacttgga 406 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 353 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgaccagga 412 Query: 407 ggccgacaagatcaactcgcttccgctcgccatcgagtacgttgccaaccaccccatggc 466 ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 413 ggccgacaagatcgactccctcccgctcgccatcgagtacgtcgccaaccaccccatggc 472 Query: 467 cggctga 473 || |||| Sbjct: 473 cgcctga 479 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| ||||||||| Sbjct: 84 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcctctccccc 137
>gb|AY224456.1| Oryza sativa (japonica cultivar-group) isolate 23479 acyl carrier protein-like protein mRNA, complete cds Length = 396 Score = 474 bits (239), Expect = e-130 Identities = 290/307 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 149 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 150 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 209 Query: 287 cccctccaaggtgacccccgaggcgcacttcgagaaggatctgggtctggacagcctgga 346 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 210 cccctccaaggtgagtcccgaggcgcacttcgagaaggatctggggctggacagcctgga 269 Query: 347 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgacttgga 406 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 270 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgaccagga 329 Query: 407 ggccgacaagatcaactcgcttccgctcgccatcgagtacgttgccaaccaccccatggc 466 ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 330 ggccgacaagatcgactccctcccgctcgccatcgagtacgtcgccaaccaccccatggc 389 Query: 467 cggctga 473 || |||| Sbjct: 390 cgcctga 396 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| ||||||||| Sbjct: 1 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcctctccccc 54
>dbj|AK103131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120B22, full insert sequence Length = 655 Score = 474 bits (239), Expect = e-130 Identities = 290/307 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 146 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 205 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 206 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 265 Query: 287 cccctccaaggtgacccccgaggcgcacttcgagaaggatctgggtctggacagcctgga 346 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 266 cccctccaaggtgagtcccgaggcgcacttcgagaaggatctggggctggacagcctgga 325 Query: 347 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgacttgga 406 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 326 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgaccagga 385 Query: 407 ggccgacaagatcaactcgcttccgctcgccatcgagtacgttgccaaccaccccatggc 466 ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 386 ggccgacaagatcgactccctcccgctcgccatcgagtacgtcgccaaccaccccatggc 445 Query: 467 cggctga 473 || |||| Sbjct: 446 cgcctga 452 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| ||||||||| Sbjct: 57 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcctctccccc 110
>dbj|AK100823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122I22, full insert sequence Length = 689 Score = 474 bits (239), Expect = e-130 Identities = 290/307 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 173 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 232 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 233 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 292 Query: 287 cccctccaaggtgacccccgaggcgcacttcgagaaggatctgggtctggacagcctgga 346 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 293 cccctccaaggtgagtcccgaggcgcacttcgagaaggatctggggctggacagcctgga 352 Query: 347 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgacttgga 406 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 353 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgaccagga 412 Query: 407 ggccgacaagatcaactcgcttccgctcgccatcgagtacgttgccaaccaccccatggc 466 ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 413 ggccgacaagatcgactccctcccgctcgccatcgagtacgtcgccaaccaccccatggc 472 Query: 467 cggctga 473 || |||| Sbjct: 473 cgcctga 479 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| ||||||||| Sbjct: 84 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcctctccccc 137
>dbj|AK060442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-E04, full insert sequence Length = 664 Score = 474 bits (239), Expect = e-130 Identities = 290/307 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 148 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 207 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 208 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 267 Query: 287 cccctccaaggtgacccccgaggcgcacttcgagaaggatctgggtctggacagcctgga 346 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 268 cccctccaaggtgagtcccgaggcgcacttcgagaaggatctggggctggacagcctgga 327 Query: 347 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgacttgga 406 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 328 cacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgaccagga 387 Query: 407 ggccgacaagatcaactcgcttccgctcgccatcgagtacgttgccaaccaccccatggc 466 ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 388 ggccgacaagatcgactccctcccgctcgccatcgagtacgtcgccaaccaccccatggc 447 Query: 467 cggctga 473 || |||| Sbjct: 448 cgcctga 454 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| | ||||||| Sbjct: 59 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcccctccccc 112
>gb|AY107088.1| Zea mays PCO113177 mRNA sequence Length = 951 Score = 369 bits (186), Expect = 7e-99 Identities = 264/290 (91%) Strand = Plus / Plus Query: 185 gcggtggctcgcgcggccaatgtcctcccacgacgcccaccttacccgcgacgaggtcgt 244 |||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||| | Sbjct: 189 gcggtggctcgcgcggcccatgtcctcccacgacgcgcacctcacccgcgacgaagtcat 248 Query: 245 cgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcgacccctccaaggtgacccc 304 |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 249 cgaccggatcctcgacgtcatcaagagccaccccaagatcgacccctccaaggtgacccc 308 Query: 305 cgaggcgcacttcgagaaggatctgggtctggacagcctggacacggtggaggtggtgat 364 |||||||||||||||||||||||||| || |||||||||||||| || |||||||| || Sbjct: 309 ggaggcgcacttcgagaaggatctggggctcgacagcctggacaccgtcgaggtggtcat 368 Query: 365 ggcgatcgaggaggagttcaagctcgagatccccgacttggaggccgacaagatcaactc 424 ||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||| Sbjct: 369 ggccatcgaggaggagttcaagctcgagatcccagacatggaggctgacaagatcgactc 428 Query: 425 gcttccgctcgccatcgagtacgttgccaaccaccccatggccggctgag 474 || || || |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 429 actccctctggccatcgagtacgtcgccaaccaccccatggctggctgag 478 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 |||||||||||||| || ||||||||||||||||||| |||||| ||||||||| Sbjct: 76 atggcggcggcagcgctccgtccggcgatcctccgccgcatccgcctctccccc 129
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 276 bits (139), Expect = 7e-71 Identities = 163/171 (95%) Strand = Plus / Plus Query: 303 cccgaggcgcacttcgagaaggatctgggtctggacagcctggacacggtggaggtggtg 362 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 6831521 cccgaggcgcacttcgagaaggatctggggctggacagcctggacacggtggaggtggtg 6831580 Query: 363 atggcgatcgaggaggagttcaagctcgagatccccgacttggaggccgacaagatcaac 422 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 6831581 atggcgatcgaggaggagttcaagctcgagatccccgaccaggaggccgacaagatcgac 6831640 Query: 423 tcgcttccgctcgccatcgagtacgttgccaaccaccccatggccggctga 473 || || |||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 6831641 tccctcccgctcgccatcgagtacgtcgccaaccaccccatggccgcctga 6831691 Score = 206 bits (104), Expect = 6e-50 Identities = 125/132 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6831309 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 6831368 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 6831369 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 6831428 Query: 287 cccctccaaggt 298 |||||||||||| Sbjct: 6831429 cccctccaaggt 6831440 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| ||||||||| Sbjct: 6831220 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcctctccccc 6831273
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 276 bits (139), Expect = 7e-71 Identities = 163/171 (95%) Strand = Plus / Plus Query: 303 cccgaggcgcacttcgagaaggatctgggtctggacagcctggacacggtggaggtggtg 362 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 125655 cccgaggcgcacttcgagaaggatctggggctggacagcctggacacggtggaggtggtg 125714 Query: 363 atggcgatcgaggaggagttcaagctcgagatccccgacttggaggccgacaagatcaac 422 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 125715 atggcgatcgaggaggagttcaagctcgagatccccgaccaggaggccgacaagatcgac 125774 Query: 423 tcgcttccgctcgccatcgagtacgttgccaaccaccccatggccggctga 473 || || |||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 125775 tccctcccgctcgccatcgagtacgtcgccaaccaccccatggccgcctga 125825 Score = 206 bits (104), Expect = 6e-50 Identities = 125/132 (94%) Strand = Plus / Plus Query: 167 ccagcccctcgccctcgcgcggtggctcgcgcggccaatgtcctcccacgacgcccacct 226 |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 125443 ccagccccacgccctggcgcggtggctcgcgcggcccatgtcctcccacgacgcccacct 125502 Query: 227 tacccgcgacgaggtcgtcgaccgcgtcctcgacgtcatcaagtgccaccccaaggtcga 286 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || Sbjct: 125503 cacccgcgacgaggtcgtcgaccgcctcctcgacgtcctcaagtgccaccccaaggttga 125562 Query: 287 cccctccaaggt 298 |||||||||||| Sbjct: 125563 cccctccaaggt 125574 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 75 atggcggcggcagcactacgtccggcgatcctccgccacatccgactctccccc 128 ||||||||||| || || || |||||||||||||||| |||||| ||||||||| Sbjct: 125354 atggcggcggcggcgctccgaccggcgatcctccgccgcatccgcctctccccc 125407
>gb|AY596521.1| Helicosporidium sp. ex Simulium jonesii mitochondrial acyl carrier protein mRNA, complete cds; nuclear gene for mitochondrial product Length = 491 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 321 aaggatctgggtctggacagcctggacacggtggaggtggtgatggcgatcgaggaggag 380 ||||| |||||||||||| ||||||||||||||| ||||||||||| | ||||||||| Sbjct: 269 aaggacctgggtctggactctctggacacggtggagctggtgatggcgttggaggaggag 328 Query: 381 ttcaagctcgagatccccga 400 || | ||||||||||||| Sbjct: 329 tttgcgatcgagatccccga 348
>ref|XM_360941.1| Magnaporthe grisea 70-15 hypothetical protein (MG03484.4) partial mRNA Length = 438 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 324 gatctgggtctggacagcctggacacggtggaggtggtgatggcgatcgaggaggagttc 383 ||||| || ||||||||| ||||||| || ||||| || ||||||||||||||||||||| Sbjct: 289 gatcttggcctggacagcttggacaccgttgaggttgtcatggcgatcgaggaggagttc 348 Query: 384 aagctcgagatccccgacttggaggccgacaagat 418 | | |||||||||||| ||| |||||| |||| Sbjct: 349 agcattgagatccccgacaaggatgccgaccagat 383
>gb|AY826827.1| Isochrysis galbana clone ISACP1 mitochondrial acyl carrier protein mRNA, partial cds; nuclear gene for mitochondrial product Length = 794 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 292 ccaaggtgacccccgaggcgcacttcgagaaggatctgggtctggacagcctggacacgg 351 |||||||||| || |||| |||||| ||| |||||||| ||||||||||||||||| | Sbjct: 181 ccaaggtgacggccaaggcacacttcttgaacgatctgggcctggacagcctggacactg 240 Query: 352 tggaggtggtgatggcgatcgaggaggagtt 382 | ||||| |||||||| ||||||| ||||| Sbjct: 241 ttgaggttgtgatggccttcgaggacgagtt 271
>gb|AY367782.1| Chlamydomonas reinhardtii acyl carrier protein 1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1059 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 315 ttcgagaaggatctgggtctggacagcctggacacggtggaggtggtgatggc 367 ||||||||||| ||||| ||||||||||||||| ||||||| |||| ||||| Sbjct: 295 ttcgagaaggacctgggcctggacagcctggacgtggtggagctggtcatggc 347
>ref|XM_324364.1| Neurospora crassa OR74A hypothetical protein (NCU05008.1) partial mRNA Length = 405 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 330 ggtctggacagcctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctc 389 ||||| |||||| ||||||| || ||||| || ||||| || |||||||||||| || Sbjct: 262 ggtcttgacagcttggacaccgttgaggttgttatggctattgaggaggagttctccatc 321 Query: 390 gagatccccgacttggaggccgacaagatcaactcg 425 |||||||||||| ||| |||||| ||||| ||||| Sbjct: 322 gagatccccgacaaggacgccgaccagatccactcg 357
>ref|XM_950842.1| Neurospora crassa OR74A hypothetical protein (NCU05008.1) partial mRNA Length = 405 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 330 ggtctggacagcctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctc 389 ||||| |||||| ||||||| || ||||| || ||||| || |||||||||||| || Sbjct: 262 ggtcttgacagcttggacaccgttgaggttgttatggctattgaggaggagttctccatc 321 Query: 390 gagatccccgacttggaggccgacaagatcaactcg 425 |||||||||||| ||| |||||| ||||| ||||| Sbjct: 322 gagatccccgacaaggacgccgaccagatccactcg 357
>emb|X59258.1|NCNUO12 N.crassa mRNA for mitochondrial 12 kD subunit of NADH:ubiquinone reductase (complex I) Length = 514 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 330 ggtctggacagcctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctc 389 ||||| |||||| ||||||| || ||||| || ||||| || |||||||||||| || Sbjct: 289 ggtcttgacagcttggacaccgttgaggttgttatggctattgaggaggagttctccatc 348 Query: 390 gagatccccgacttggaggccgacaagatcaactcg 425 |||||||||||| ||| |||||| ||||| ||||| Sbjct: 349 gagatccccgacaaggacgccgaccagatccactcg 384
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 358 tggtgatggcgatcgaggaggagttcaagctcgagatccccgacttggaggccgacaaga 417 |||| ||||| || |||||||||||| || |||||||||||||| ||||||||| || | Sbjct: 3106757 tggtcatggccatggaggaggagttcgaggtcgagatccccgacgaggaggccgagaaca 3106698 Query: 418 tcaa 421 |||| Sbjct: 3106697 tcaa 3106694 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 gcgccaccgcggccggccag 170 |||||||||||||||||||| Sbjct: 3543383 gcgccaccgcggccggccag 3543364
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 279 aaggtcgacccctccaaggtgacccccgaggcgcacttcgagaaggatctgggt 332 |||||||| |||||||||||||||| ||| | ||||| | ||||||||||||| Sbjct: 70652 aaggtcgatgcctccaaggtgacccctgagtcacactttgtgaaggatctgggt 70599
>gb|AC124150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0001I22, complete sequence Length = 162413 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 342 ctggacacggtggaggtggtgatggcgatcgaggaggagttc 383 ||||||||||||||| | ||||||||| | |||||||||||| Sbjct: 80426 ctggacacggtggagatcgtgatggcgctggaggaggagttc 80385
>ref|XM_842890.1| Leishmania major strain Friedlin acyl carrier protein (LMJ_0285) partial mRNA Length = 453 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 279 aaggtcgacccctccaaggtgacccccgaggcgcacttcgagaaggatctgggt 332 |||||||| |||||||||||||||| ||| | ||||| | ||||||||||||| Sbjct: 259 aaggtcgatgcctccaaggtgacccctgagtcacactttgtgaaggatctgggt 312
>ref|XM_658216.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5704.2) partial mRNA Length = 414 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 336 gacagcctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatc 395 ||||| || ||||| || ||||| |||||||| |||||||||||||||| | |||||| Sbjct: 277 gacagtctcgacaccgttgaggttgtgatggccatcgaggaggagttcagcattgagatc 336 Query: 396 cccgac 401 |||||| Sbjct: 337 cccgac 342
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 342 ctggacacggtggaggtggtgatggcgatcgaggaggagttc 383 ||||||||||||||| | ||||||||| | |||||||||||| Sbjct: 18157828 ctggacacggtggagatcgtgatggcgctggaggaggagttc 18157869
>dbj|AK120212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039D22, full insert sequence Length = 869 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 342 ctggacacggtggaggtggtgatggcgatcgaggaggagttc 383 ||||||||||||||| | ||||||||| | |||||||||||| Sbjct: 365 ctggacacggtggagatcgtgatggcgctggaggaggagttc 406
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 342 ctggacacggtggaggtggtgatggcgatcgaggaggagttc 383 ||||||||||||||| | ||||||||| | |||||||||||| Sbjct: 18245169 ctggacacggtggagatcgtgatggcgctggaggaggagttc 18245128
>ref|XM_745318.1| Aspergillus fumigatus Af293 acyl carrier protein (Afu1g06620) partial mRNA Length = 630 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 341 cctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccga 400 |||||| || || ||||| |||||||| || ||||||||||||| | ||||||||||| Sbjct: 399 cctggatactgttgaggttgtgatggctattgaggaggagttcagcattgagatccccga 458 Query: 401 cttggaggccgac 413 | |||||||||| Sbjct: 459 caaggaggccgac 471
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 336 gacagcctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatc 395 |||||||| || ||||||||| |||| ||||| |||||||||||||| | || || ||| Sbjct: 2892317 gacagcctcgatacggtggagctggtcatggccttcgaggaggagttcgatctggaaatc 2892258 Query: 396 cccga 400 ||||| Sbjct: 2892257 cccga 2892253
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 46.1 bits (23), Expect = 0.12 Identities = 65/79 (82%) Strand = Plus / Minus Query: 342 ctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgac 401 ||||||||||| ||| |||||||||| ||||||| |||||| || ||| || |||||| Sbjct: 2149528 ctggacacggtcgagctggtgatggcactcgaggaagagttcgagtgcgaaattcccgac 2149469 Query: 402 ttggaggccgacaagatca 420 ||| ||||| ||||||| Sbjct: 2149468 gaggacgccgaaaagatca 2149450
>dbj|AK110032.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-A10, full insert sequence Length = 1843 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 350 ggtggaggtggtgatggcgatcgagga 376 ||||||||||||||||| ||||||||| Sbjct: 466 ggtggaggtggtgatggggatcgagga 440
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 230 ccgcgacgaggtcgtcgaccgcg 252 ||||||||||||||||||||||| Sbjct: 289181 ccgcgacgaggtcgtcgaccgcg 289159 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 146 cgtcggcgccaccgcggccggccagcccctcg 177 ||||||||||||| | |||||||||| ||||| Sbjct: 3872736 cgtcggcgccaccccagccggccagcacctcg 3872705
>ref|XM_473498.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1539 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ctcgtcggcgccaccgcggccg 165 |||||||||||||||||||||| Sbjct: 718 ctcgtcggcgccaccgcggccg 739
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 aggtggtgatggcgatcgagga 376 |||||||||||||||||||||| Sbjct: 2386100 aggtggtgatggcgatcgagga 2386121
>gb|AC006348.3| Homo sapiens PAC clone RP5-876K2 from 7, complete sequence Length = 135883 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 gcgaagagaaaggcggacagga 72 |||||||||||||||||||||| Sbjct: 15152 gcgaagagaaaggcggacagga 15173
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 355 aggtggtgatggcgatcgagga 376 |||||||||||||||||||||| Sbjct: 1998465 aggtggtgatggcgatcgagga 1998444
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ctcgtcggcgccaccgcggccg 165 |||||||||||||||||||||| Sbjct: 119397 ctcgtcggcgccaccgcggccg 119376
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 ctcgtcggcgccaccgcggccg 165 |||||||||||||||||||||| Sbjct: 28112172 ctcgtcggcgccaccgcggccg 28112151 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 ggaggtggtgatggcgatcgaggaggag 380 ||||||||||| |||||| ||||||||| Sbjct: 30896957 ggaggtggtgaaggcgatggaggaggag 30896984
>dbj|AK060598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G11, full insert sequence Length = 1765 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 ctcgtcggcgccaccgcggccg 165 |||||||||||||||||||||| Sbjct: 804 ctcgtcggcgccaccgcggccg 825
>ref|XM_368066.1| Magnaporthe grisea 70-15 chromosome III predicted protein (MG07970.4) partial mRNA Length = 1470 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 374 ggaggagttcaagctcgagatccccgacttgga 406 |||||||||| || |||| |||||||||||||| Sbjct: 492 ggaggagttcgaggtcgacatccccgacttgga 524
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 428 tccgctcgccatcgagtacgttgcc 452 ||||||||||| ||||||||||||| Sbjct: 559275 tccgctcgccaacgagtacgttgcc 559251
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ggtgatggcgatcgaggagga 379 ||||||||||||||||||||| Sbjct: 203234 ggtgatggcgatcgaggagga 203254
>ref|XM_502836.1| Yarrowia lipolytica CLIB122, YALI0D14850g predicted mRNA Length = 330 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 369 atcgaggaggagttcaagctcgagatccccgacttggaggccgacaagatcaa 421 ||||||||||||||| |||||||||||||| |||||| ||| ||||||| Sbjct: 226 atcgaggaggagttcggcatcgagatccccgacaaggaggctgacgagatcaa 278
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.9 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 148 tcggcgccaccgcggccggccagcccctc 176 ||||||||||||||| ||||||||||||| Sbjct: 5086219 tcggcgccaccgcgg-cggccagcccctc 5086192
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 ctgggtctggacagcctggac 347 ||||||||||||||||||||| Sbjct: 3410357 ctgggtctggacagcctggac 3410377
>emb|AL116367.1|CNS01D4N Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 gacagcctggacacggtggaggtggtgatggcgatcgaggaggagttca 384 |||||| ||||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 276 gacagcttggacactgtagaggttgttatggctatcgaggaggaattca 324
>emb|AL114275.1|CNS01BIJ Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 gacagcctggacacggtggaggtggtgatggcgatcgaggaggagttca 384 |||||| ||||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 305 gacagcttggacactgtagaggttgttatggctatcgaggaggaattca 353
>emb|AL111820.1|CNS019MC Botrytis cinerea strain T4 cDNA library Length = 600 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 gacagcctggacacggtggaggtggtgatggcgatcgaggaggagttca 384 |||||| ||||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 296 gacagcttggacactgtagaggttgttatggctatcgaggaggaattca 344
>emb|AL111369.1|CNS0199T Botrytis cinerea strain T4 cDNA library Length = 600 Score = 42.1 bits (21), Expect = 1.9 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 gacagcctggacacggtggaggtggtgatggcgatcgaggaggagttca 384 |||||| ||||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 294 gacagcttggacactgtagaggttgttatggctatcgaggaggaattca 342
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 cagcactacgtccggcgatcc 105 ||||||||||||||||||||| Sbjct: 12685411 cagcactacgtccggcgatcc 12685431
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 cagcactacgtccggcgatcc 105 ||||||||||||||||||||| Sbjct: 52440 cagcactacgtccggcgatcc 52460
>dbj|AK110223.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-E03, full insert sequence Length = 2451 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 cagcactacgtccggcgatcc 105 ||||||||||||||||||||| Sbjct: 789 cagcactacgtccggcgatcc 809
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 369 atcgaggaggagttcaagctcgagatccccgacttggaggccgacaagatcaa 421 ||||||||||||||| |||||||||||||| |||||| ||| ||||||| Sbjct: 1803898 atcgaggaggagttcggcatcgagatccccgacaaggaggctgacgagatcaa 1803950
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 gatcgaggaggagttcaagctcga 391 ||||||||||||| |||||||||| Sbjct: 2249109 gatcgaggaggaggtcaagctcga 2249132
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 cgatcgaggaggagttcaagctcg 390 ||||||||||| |||||||||||| Sbjct: 2077773 cgatcgaggagcagttcaagctcg 2077796 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 358 tggtgatggcgatcgaggaggagttcaagctcgagatccccgac 401 |||||||||| |||||||||||||| | |||||||| ||||| Sbjct: 1803006 tggtgatggccctcgaggaggagttcgacatcgagatctccgac 1803049
>ref|XM_473838.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 ggaggtggtgatggcgatcgaggaggag 380 ||||||||||| |||||| ||||||||| Sbjct: 1314 ggaggtggtgaaggcgatggaggaggag 1341
>ref|XM_414872.1| PREDICTED: Gallus gallus similar to Acyl carrier protein, mitochondrial precursor (ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) (CI-SDAP) (LOC416571), mRNA Length = 782 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 320 gaaggatctgggtctggacagcctggac 347 |||||| ||||| ||||||||||||||| Sbjct: 441 gaaggacctggggctggacagcctggac 468
>ref|XM_952059.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial mRNA Length = 2310 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccgcgacgaggtcgtcgacc 249 |||||||||||||||||||| Sbjct: 1773 ccgcgacgaggtcgtcgacc 1792
>ref|XM_326366.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial mRNA Length = 2310 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccgcgacgaggtcgtcgacc 249 |||||||||||||||||||| Sbjct: 1773 ccgcgacgaggtcgtcgacc 1792
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.6 Identities = 68/84 (80%) Strand = Plus / Plus Query: 342 ctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgac 401 |||||||| || ||| ||||||||||| | || || |||||| || ||||||||| ||| Sbjct: 1275879 ctggacaccgtcgagctggtgatggcgctggaagaagagttcgagtgcgagatcccggac 1275938 Query: 402 ttggaggccgacaagatcaactcg 425 |||||||| ||||||| |||| Sbjct: 1275939 gaagaggccgagaagatcacctcg 1275962
>gb|AC074389.8| Homo sapiens BAC clone RP11-510K8 from 7, complete sequence Length = 195782 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cagcctggacacggtggagg 357 |||||||||||||||||||| Sbjct: 140008 cagcctggacacggtggagg 139989
>gb|U41019.2| Caenorhabditis elegans cosmid C04E7, complete sequence Length = 37360 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 gatttttcttgtttctgttt 531 |||||||||||||||||||| Sbjct: 10554 gatttttcttgtttctgttt 10573
>emb|AL663105.4| Human DNA sequence from clone RP4-743D20 on chromosome 1 Contains a novel gene and a CpG island, complete sequence Length = 157062 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 tgaataattgactggagttg 559 |||||||||||||||||||| Sbjct: 123381 tgaataattgactggagttg 123400
>emb|AL356354.10| Human DNA sequence from clone RP4-651A20 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 47980 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccaccgcggccggccagcccctc 176 ||||||||| |||||||||||||| Sbjct: 47471 gccaccgcgcccggccagcccctc 47494
>emb|CR858423.1| Pongo pygmaeus mRNA; cDNA DKFZp468C0711 (from clone DKFZp468C0711) Length = 2260 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ggaagatggcggcggcagca 89 |||||||||||||||||||| Sbjct: 82 ggaagatggcggcggcagca 101
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctcgtcggcgccaccgcggc 163 |||||||||||||||||||| Sbjct: 135034 ctcgtcggcgccaccgcggc 135053
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 ggaggtggtgatggcgatcgaggaggag 380 ||||||||||| |||||| ||||||||| Sbjct: 164478 ggaggtggtgaaggcgatggaggaggag 164505
>emb|CR857972.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1813 (from clone DKFZp469A1813) Length = 4213 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 atttttcttgtttctgtttc 532 |||||||||||||||||||| Sbjct: 3418 atttttcttgtttctgtttc 3399
>gb|AE011741.1| Xanthomonas axonopodis pv. citri str. 306, section 119 of 469 of the complete genome Length = 11361 Score = 40.1 bits (20), Expect = 7.6 Identities = 68/84 (80%) Strand = Plus / Plus Query: 342 ctggacacggtggaggtggtgatggcgatcgaggaggagttcaagctcgagatccccgac 401 |||||||| || ||| ||||||||||| | || || |||||| || ||||||||| ||| Sbjct: 5782 ctggacaccgtcgagctggtgatggcgctggaagaagagttcgagtgcgagatcccggac 5841 Query: 402 ttggaggccgacaagatcaactcg 425 |||||||| ||||||| |||| Sbjct: 5842 gaagaggccgagaagatcacctcg 5865
>gb|AC007425.16| Homo sapiens 12q24.1-120.5-B PAC RPCI5-1048I22 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 139971 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tctgggtctggacagcctgg 345 |||||||||||||||||||| Sbjct: 47667 tctgggtctggacagcctgg 47686
>gb|AF404820.1|AF404820 Neurospora crassa methionine synthase (met-8) gene, complete cds Length = 3269 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ccgcgacgaggtcgtcgacc 249 |||||||||||||||||||| Sbjct: 2139 ccgcgacgaggtcgtcgacc 2158
>ref|NM_075688.1| Caenorhabditis elegans C04E7.3 (C04E7.3) mRNA, complete cds Length = 1557 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 gatttttcttgtttctgttt 531 |||||||||||||||||||| Sbjct: 620 gatttttcttgtttctgttt 601
>emb|BX931278.2| Gallus gallus finished cDNA, clone ChEST264l17 Length = 633 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 320 gaaggatctgggtctggacagcctggac 347 |||||| ||||| ||||||||||||||| Sbjct: 294 gaaggacctggggctggacagcctggac 321
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aggaagatggcggcggcagc 88 |||||||||||||||||||| Sbjct: 9783816 aggaagatggcggcggcagc 9783835
>gb|AC004216.1| Homo sapiens 12 PAC RPCI1-66E7 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 181098 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tctgggtctggacagcctgg 345 |||||||||||||||||||| Sbjct: 33163 tctgggtctggacagcctgg 33144
>emb|BX934815.1| Gallus gallus finished cDNA, clone ChEST560h19 Length = 697 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 320 gaaggatctgggtctggacagcctggac 347 |||||| ||||| ||||||||||||||| Sbjct: 359 gaaggacctggggctggacagcctggac 386
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gccggccagcccctcgccct 181 |||||||||||||||||||| Sbjct: 7794391 gccggccagcccctcgccct 7794410
>emb|BX929522.1| Gallus gallus finished cDNA, clone ChEST187o12 Length = 637 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 320 gaaggatctgggtctggacagcctggac 347 |||||| ||||| ||||||||||||||| Sbjct: 296 gaaggacctggggctggacagcctggac 323
>gb|AC079610.4| Homo sapiens BAC clone RP11-105N14 from 2, complete sequence Length = 161031 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atttttcttgtttctgtttc 532 |||||||||||||||||||| Sbjct: 77287 atttttcttgtttctgtttc 77306
>gb|AC010761.10| Homo sapiens chromosome 17, clone RP11-386F9, complete sequence Length = 177773 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccaccgcggccggccagcccctc 176 ||||||||| |||||||||||||| Sbjct: 44209 gccaccgcgcccggccagcccctc 44186
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gacaggaagatggcggcggc 85 |||||||||||||||||||| Sbjct: 1361145 gacaggaagatggcggcggc 1361164
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aggaagatggcggcggcagc 88 |||||||||||||||||||| Sbjct: 74058 aggaagatggcggcggcagc 74077
>gb|AE005003.1| Halobacterium sp. NRC-1 section 34 of 170 of the complete genome Length = 14379 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cgacgaggtcgtcgaccgcg 252 |||||||||||||||||||| Sbjct: 3207 cgacgaggtcgtcgaccgcg 3226
>ref|XM_311361.2| Anopheles gambiae str. PEST ENSANGP00000016697 (ENSANGG00000014208), partial mRNA Length = 3390 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 gaggtggtgatggcgatcgaggag 377 ||||||||||||||||||| |||| Sbjct: 1099 gaggtggtgatggcgatcgtggag 1122
>emb|CT573365.4| M.truncatula DNA sequence from clone MTH2-89E15 on chromosome 3, complete sequence Length = 123679 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cggtggaggtggtgatggcg 368 |||||||||||||||||||| Sbjct: 72139 cggtggaggtggtgatggcg 72158
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 ggaggtggtgatggcgatcgaggaggag 380 ||||||||||| |||||| ||||||||| Sbjct: 73931 ggaggtggtgaaggcgatggaggaggag 73958
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gtcgtcgaccgcgtcctcgacgtc 263 ||||||||||||| |||||||||| Sbjct: 1128285 gtcgtcgaccgcgacctcgacgtc 1128308 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,169,122 Number of Sequences: 3902068 Number of extensions: 4169122 Number of successful extensions: 95034 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 92900 Number of HSP's gapped (non-prelim): 2136 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)