ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25h04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103539.1| Zea mays PCO103478 mRNA sequence Length = 2010 Score = 418 bits (211), Expect = e-114 Identities = 413/479 (86%), Gaps = 6/479 (1%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccg 148 ||||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 311 ccatggagaaggcgatcgatcggcagcgggtcctcctggcgcacctcctcccctccccct 370 Query: 149 cctccgccg----gcagcc--agctttccgcgtcggcgtgcgcggccggggacagcgccg 202 || ||||| |||||| ||||| | ||||||||||||||||||||||||||||||| Sbjct: 371 ccgccgcctcctcgcagcctcagcttgcggcgtcggcgtgcgcggccggggacagcgccg 430 Query: 203 cctaccagaggacctcctgcttcggggacgaccgcgtcatcgtcgctgcctaccggacac 262 ||||||||||| |||||| |||||||||||| |||| |||||||||||||| |||| | Sbjct: 431 cctaccagaggtcctcctccttcggggacgatgtcgtcgtcgtcgctgcctacaggacgc 490 Query: 263 cgatatgcaaggccaagcgaggaggcttcaaggacacgtacccggaggaccttcttaccc 322 ||||||||||||||||||||||||||||||||||||| ||||| |||||||| || || Sbjct: 491 cgatatgcaaggccaagcgaggaggcttcaaggacacctacccagaggacctcctcactg 550 Query: 323 ctgtcctcaaggctgttctggacaaaactggaatcaacccagctgagatcggcgacgttg 382 ||| |||||||||||||||||||| ||| ||||||| |||||||| ||||| ||| | | Sbjct: 551 ttgttctcaaggctgttctggacaacactagaatcaatccagctgacatcggtgacatcg 610 Query: 383 tagtcgggacggtgctaggcccgggttctcagcgtgccattgagtgcaggacggcatctc 442 | || ||||||||||| ||||| ||||| |||||||| | |||||||||| ||| | Sbjct: 611 tcgttgggacggtgcttggccctggttcccagcgtgcaaacgagtgcaggatggctgcgt 670 Query: 443 tgttggctggaattcctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctg 502 |||| |||||| | ||||| ||||| ||||| |||||||| ||||| || || ||||||| Sbjct: 671 tgtttgctggattccctgaaaccgtccctgttagaactgtcaaccgccagtgttcatctg 730 Query: 503 ggctacaagcagtagctgatgttgccgctgctataaaagctggtttctatgacataggg 561 ||||||| |||||||||||||| || ||||||||||| ||||||| ||||||||||||| Sbjct: 731 ggctacaggcagtagctgatgtcgcagctgctataaaggctggttactatgacataggg 789
>gb|BT018838.1| Zea mays clone EL01N0552G11.d mRNA sequence Length = 1681 Score = 387 bits (195), Expect = e-104 Identities = 409/479 (85%), Gaps = 6/479 (1%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccg 148 ||||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 94 ccatggagaaggcgatcgatcggcagcgggtcctcctggcgcacctcctcccctccccct 153 Query: 149 cctccgccg----gcagcc--agctttccgcgtcggcgtgcgcggccggggacagcgccg 202 || ||||| |||||| ||||| | ||||||||||||||||||||||||||||||| Sbjct: 154 ccgccgcctcctcgcagcctcagcttgcggcgtcggcgtgcgcggccggggacagcgccg 213 Query: 203 cctaccagaggacctcctgcttcggggacgaccgcgtcatcgtcgctgcctaccggacac 262 ||||||||||| |||||| |||||||||||| |||| |||||||||||||| |||| | Sbjct: 214 cctaccagaggtcctcctccttcggggacgatgtcgtcgtcgtcgctgcctacaggacgc 273 Query: 263 cgatatgcaaggccaagcgaggaggcttcaaggacacgtacccggaggaccttcttaccc 322 ||||||||||||||||||||||||||||||||||||| ||||| |||||||| || || Sbjct: 274 cgatatgcaaggccaagcgaggaggcttcaaggacacctacccagaggacctcctcactg 333 Query: 323 ctgtcctcaaggctgttctggacaaaactggaatcaacccagctgagatcggcgacgttg 382 ||| |||||||||||||||||||| ||| ||||||| |||||||| ||||| ||| | | Sbjct: 334 ttgttctcaaggctgttctggacaacactagaatcaatccagctgacatcggtgacatcg 393 Query: 383 tagtcgggacggtgctaggcccgggttctcagcgtgccattgagtgcaggacggcatctc 442 | || ||||||||||| ||||| ||||| |||||||| | |||||||||| ||| | Sbjct: 394 tcgttgggacggtgctcggccctggttcccagcgtgcaaacgagtgcaggatggctgcgt 453 Query: 443 tgttggctggaattcctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctg 502 |||| || | | ||||| ||||| ||||| |||||||| ||||| || || ||||||| Sbjct: 454 tgtttgcccgcttccctgaaaccgtccctgttagaactgtcaaccgccactgttcatctg 513 Query: 503 ggctacaagcagtagctgatgttgccgctgctataaaagctggtttctatgacataggg 561 ||||||| |||||||| ||||| || ||||||||||| ||||||| ||||||||||||| Sbjct: 514 ggctacaggcagtagccgatgtcgcagctgctataaaggctggttactatgacataggg 572
>ref|XM_468412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1579 Score = 280 bits (141), Expect = 5e-72 Identities = 330/393 (83%) Strand = Plus / Plus Query: 169 tccgcgtcggcgtgcgcggccggggacagcgccgcctaccagaggacctcctgcttcggg 228 ||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||| Sbjct: 206 tccgcgtcggcgtgcgccgccggggacagcgccgcctaccagaggacttccgcctacggg 265 Query: 229 gacgaccgcgtcatcgtcgctgcctaccggacaccgatatgcaaggccaagcgaggaggc 288 |||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 266 gacgacgtcgtcgtcgtcgctgcctacaggacacccatatgcaaggccaagcgaggaggt 325 Query: 289 ttcaaggacacgtacccggaggaccttcttacccctgtcctcaaggctgttctggacaaa 348 |||||||| || ||||| |||||||||||||| ||| || ||||||||||||||||| Sbjct: 326 ttcaaggatacatacccagaggaccttcttactgttgttctaaaggctgttctggacaac 385 Query: 349 actggaatcaacccagctgagatcggcgacgttgtagtcgggacggtgctaggcccgggt 408 ||| |||||||| | ||| || || ||| ||||||| || ||||||||||| || || Sbjct: 386 actaagatcaaccctggtgaaattggtgacattgtagttggcacggtgctaggtccaggc 445 Query: 409 tctcagcgtgccattgagtgcaggacggcatctctgttggctggaattcctgagaccgtt 468 || |||||||| || ||||||||| | || || | | |||||| |||| || | |||| Sbjct: 446 tcgcagcgtgcaatcgagtgcagggctgcggctttctatgctggagttcccgaaaacgtt 505 Query: 469 cctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgcc 528 ||||| |||||||| ||||| ||||| || ||||| |||| ||||| |||||||||||| Sbjct: 506 cctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgttgcc 565 Query: 529 gctgctataaaagctggtttctatgacataggg 561 || || || |||||||| ||||| ||||||||| Sbjct: 566 gcggccattaaagctgggttctacgacataggg 598 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccg 148 ||||||||||||||||||| || |||||||| |||||||| ||||||||||||||| || Sbjct: 126 ccatggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcct 185 Query: 149 cctccg 154 |||||| Sbjct: 186 cctccg 191
>ref|XM_507050.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.17 patrial mRNA Length = 1582 Score = 280 bits (141), Expect = 5e-72 Identities = 330/393 (83%) Strand = Plus / Plus Query: 169 tccgcgtcggcgtgcgcggccggggacagcgccgcctaccagaggacctcctgcttcggg 228 ||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||| Sbjct: 209 tccgcgtcggcgtgcgccgccggggacagcgccgcctaccagaggacttccgcctacggg 268 Query: 229 gacgaccgcgtcatcgtcgctgcctaccggacaccgatatgcaaggccaagcgaggaggc 288 |||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 269 gacgacgtcgtcgtcgtcgctgcctacaggacacccatatgcaaggccaagcgaggaggt 328 Query: 289 ttcaaggacacgtacccggaggaccttcttacccctgtcctcaaggctgttctggacaaa 348 |||||||| || ||||| |||||||||||||| ||| || ||||||||||||||||| Sbjct: 329 ttcaaggatacatacccagaggaccttcttactgttgttctaaaggctgttctggacaac 388 Query: 349 actggaatcaacccagctgagatcggcgacgttgtagtcgggacggtgctaggcccgggt 408 ||| |||||||| | ||| || || ||| ||||||| || ||||||||||| || || Sbjct: 389 actaagatcaaccctggtgaaattggtgacattgtagttggcacggtgctaggtccaggc 448 Query: 409 tctcagcgtgccattgagtgcaggacggcatctctgttggctggaattcctgagaccgtt 468 || |||||||| || ||||||||| | || || | | |||||| |||| || | |||| Sbjct: 449 tcgcagcgtgcaatcgagtgcagggctgcggctttctatgctggagttcccgaaaacgtt 508 Query: 469 cctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgcc 528 ||||| |||||||| ||||| ||||| || ||||| |||| ||||| |||||||||||| Sbjct: 509 cctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgttgcc 568 Query: 529 gctgctataaaagctggtttctatgacataggg 561 || || || |||||||| ||||| ||||||||| Sbjct: 569 gcggccattaaagctgggttctacgacataggg 601 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccg 148 ||||||||||||||||||| || |||||||| |||||||| ||||||||||||||| || Sbjct: 129 ccatggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcct 188 Query: 149 cctccg 154 |||||| Sbjct: 189 cctccg 194
>gb|AY224469.1| Oryza sativa (japonica cultivar-group) isolate 24733 3-ketoacyl-CoA thiolase-like protein mRNA, complete cds Length = 1347 Score = 280 bits (141), Expect = 5e-72 Identities = 330/393 (83%) Strand = Plus / Plus Query: 169 tccgcgtcggcgtgcgcggccggggacagcgccgcctaccagaggacctcctgcttcggg 228 ||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||| Sbjct: 79 tccgcgtcggcgtgcgccgccggggacagcgccgcctaccagaggacttccgcctacggg 138 Query: 229 gacgaccgcgtcatcgtcgctgcctaccggacaccgatatgcaaggccaagcgaggaggc 288 |||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 139 gacgacgtcgtcgtcgtcgctgcctacaggacacccatatgcaaggccaagcgaggaggt 198 Query: 289 ttcaaggacacgtacccggaggaccttcttacccctgtcctcaaggctgttctggacaaa 348 |||||||| || ||||| |||||||||||||| ||| || ||||||||||||||||| Sbjct: 199 ttcaaggatacatacccagaggaccttcttactgttgttctaaaggctgttctggacaac 258 Query: 349 actggaatcaacccagctgagatcggcgacgttgtagtcgggacggtgctaggcccgggt 408 ||| |||||||| | ||| || || ||| ||||||| || ||||||||||| || || Sbjct: 259 actaagatcaaccctggtgaaattggtgacattgtagttggcacggtgctaggtccaggc 318 Query: 409 tctcagcgtgccattgagtgcaggacggcatctctgttggctggaattcctgagaccgtt 468 || |||||||| || ||||||||| | || || | | |||||| |||| || | |||| Sbjct: 319 tcgcagcgtgcaatcgagtgcagggctgcggctttctatgctggagttcccgaaaacgtt 378 Query: 469 cctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgcc 528 ||||| |||||||| ||||| ||||| || ||||| |||| ||||| |||||||||||| Sbjct: 379 cctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgttgcc 438 Query: 529 gctgctataaaagctggtttctatgacataggg 561 || || || |||||||| ||||| ||||||||| Sbjct: 439 gcggccattaaagctgggttctacgacataggg 471 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 91 atggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccgcc 150 ||||||||||||||||| || |||||||| |||||||| ||||||||||||||| || || Sbjct: 1 atggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcctcc 60 Query: 151 tccg 154 |||| Sbjct: 61 tccg 64
>dbj|AK069768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030K20, full insert sequence Length = 2045 Score = 280 bits (141), Expect = 5e-72 Identities = 330/393 (83%) Strand = Plus / Plus Query: 169 tccgcgtcggcgtgcgcggccggggacagcgccgcctaccagaggacctcctgcttcggg 228 ||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||| Sbjct: 209 tccgcgtcggcgtgcgccgccggggacagcgccgcctaccagaggacttccgcctacggg 268 Query: 229 gacgaccgcgtcatcgtcgctgcctaccggacaccgatatgcaaggccaagcgaggaggc 288 |||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 269 gacgacgtcgtcgtcgtcgctgcctacaggacacccatatgcaaggccaagcgaggaggt 328 Query: 289 ttcaaggacacgtacccggaggaccttcttacccctgtcctcaaggctgttctggacaaa 348 |||||||| || ||||| |||||||||||||| ||| || ||||||||||||||||| Sbjct: 329 ttcaaggatacatacccagaggaccttcttactgttgttctaaaggctgttctggacaac 388 Query: 349 actggaatcaacccagctgagatcggcgacgttgtagtcgggacggtgctaggcccgggt 408 ||| |||||||| | ||| || || ||| ||||||| || ||||||||||| || || Sbjct: 389 actaagatcaaccctggtgaaattggtgacattgtagttggcacggtgctaggtccaggc 448 Query: 409 tctcagcgtgccattgagtgcaggacggcatctctgttggctggaattcctgagaccgtt 468 || |||||||| || ||||||||| | || || | | |||||| |||| || | |||| Sbjct: 449 tcgcagcgtgcaatcgagtgcagggctgcggctttctatgctggagttcccgaaaacgtt 508 Query: 469 cctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgcc 528 ||||| |||||||| ||||| ||||| || ||||| |||| ||||| |||||||||||| Sbjct: 509 cctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgttgcc 568 Query: 529 gctgctataaaagctggtttctatgacataggg 561 || || || |||||||| ||||| ||||||||| Sbjct: 569 gcggccattaaagctgggttctacgacataggg 601 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccg 148 ||||||||||||||||||| || |||||||| |||||||| ||||||||||||||| || Sbjct: 129 ccatggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcct 188 Query: 149 cctccg 154 |||||| Sbjct: 189 cctccg 194
>dbj|AK061948.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E07, full insert sequence Length = 1803 Score = 250 bits (126), Expect = 4e-63 Identities = 327/393 (83%), Gaps = 2/393 (0%) Strand = Plus / Plus Query: 169 tccgcgtcggcgtgcgcggccggggacagcgccgcctaccagaggacctcctgcttcggg 228 ||||||||||||||||| |||||||||||||||||| |||||||| ||| || |||| Sbjct: 206 tccgcgtcggcgtgcgccgccggggacagcgccgcca--cagaggacttccgcctacggg 263 Query: 229 gacgaccgcgtcatcgtcgctgcctaccggacaccgatatgcaaggccaagcgaggaggc 288 |||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 264 gacgacgtcgtcgtcgtcgctgcctacaggacacccatatgcaaggccaagcgaggaggt 323 Query: 289 ttcaaggacacgtacccggaggaccttcttacccctgtcctcaaggctgttctggacaaa 348 |||||||| || ||||| |||||||||||||| ||| || ||||||||||||||||| Sbjct: 324 ttcaaggatacatacccagaggaccttcttactgttgttctaaaggctgttctggacaac 383 Query: 349 actggaatcaacccagctgagatcggcgacgttgtagtcgggacggtgctaggcccgggt 408 ||| |||||||| | ||| || || ||| ||||||| || ||||||||||| || || Sbjct: 384 actaagatcaaccctggtgaaattggtgacattgtagttggcacggtgctaggtccaggc 443 Query: 409 tctcagcgtgccattgagtgcaggacggcatctctgttggctggaattcctgagaccgtt 468 || |||||||| || ||||||||| | || || | | |||||| |||| || | |||| Sbjct: 444 tcgcagcgtgcaatcgagtgcagggctgcggctttctatgctggagttcccgaaaacgtt 503 Query: 469 cctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgcc 528 ||||| |||||||| ||||| ||||| || ||||| |||| ||||| |||||||||||| Sbjct: 504 cctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgttgcc 563 Query: 529 gctgctataaaagctggtttctatgacataggg 561 || || || |||||||| ||||| ||||||||| Sbjct: 564 gcggccattaaagctgggttctacgacataggg 596 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccg 148 ||||||||||||||||||| || |||||||| |||||||| ||||||||||||||| || Sbjct: 126 ccatggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcct 185 Query: 149 cctccg 154 |||||| Sbjct: 186 cctccg 191
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 249 tgcctaccggacaccgatatgcaaggccaagcgaggaggcttcaaggacacgtacccgga 308 ||||||| ||||||| ||||||||||||||||||||||| |||||||| || ||||| || Sbjct: 35102707 tgcctacaggacacccatatgcaaggccaagcgaggaggtttcaaggatacatacccaga 35102648 Query: 309 ggaccttcttac 320 |||||||||||| Sbjct: 35102647 ggaccttcttac 35102636 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 172 gcgtcggcgtgcgcggccggggacagcgccgcctaccagaggacctcctgcttcggggac 231 |||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||| Sbjct: 35103373 gcgtcggcgtgcgccgccggggacagcgccgcctaccagaggacttccgcctacggggac 35103314 Query: 232 gaccgcgtcatcgtcgc 248 ||| |||| ||||||| Sbjct: 35103313 gacgtcgtcgtcgtcgc 35103297 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccg 148 ||||||||||||||||||| || |||||||| |||||||| ||||||||||||||| || Sbjct: 35103564 ccatggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcct 35103505 Query: 149 cctccg 154 |||||| Sbjct: 35103504 cctccg 35103499 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 465 cgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgt 524 ||||||||| |||||||| ||||| ||||| || ||||| |||| ||||| |||||||| Sbjct: 35102275 cgttcctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgt 35102216 Query: 525 tgccgctgctataaaagctggtttctatgacatagg 560 |||||| || || |||||||| ||||| |||||||| Sbjct: 35102215 tgccgcggccattaaagctgggttctacgacatagg 35102180 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 332 aggctgttctggacaaaactggaatcaacccagctgagatcggcgacgttgtagtcggga 391 |||||||||||||||| ||| |||||||| | ||| || || ||| ||||||| || | Sbjct: 35102507 aggctgttctggacaacactaagatcaaccctggtgaaattggtgacattgtagttggca 35102448 Query: 392 cggtgctaggcccgggttctcagcgtgccattgagtgcagg 432 |||||||||| || || || |||||||| || ||||||||| Sbjct: 35102447 cggtgctaggtccaggctcgcagcgtgcaatcgagtgcagg 35102407 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctcc 153 |||||||||||||||| ||||||| Sbjct: 35242022 cacctcctcccctccctcgcctcc 35241999 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ctcctcccctcccccgcctc 152 |||||||||||||||||||| Sbjct: 12737881 ctcctcccctcccccgcctc 12737862 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctccgccg 157 |||||||||||| || |||||||||||| Sbjct: 8800639 cacctcctccccgccgccgcctccgccg 8800612
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 249 tgcctaccggacaccgatatgcaaggccaagcgaggaggcttcaaggacacgtacccgga 308 ||||||| ||||||| ||||||||||||||||||||||| |||||||| || ||||| || Sbjct: 75870 tgcctacaggacacccatatgcaaggccaagcgaggaggtttcaaggatacatacccaga 75811 Query: 309 ggaccttcttac 320 |||||||||||| Sbjct: 75810 ggaccttcttac 75799 Score = 89.7 bits (45), Expect = 9e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 172 gcgtcggcgtgcgcggccggggacagcgccgcctaccagaggacctcctgcttcggggac 231 |||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||| Sbjct: 76536 gcgtcggcgtgcgccgccggggacagcgccgcctaccagaggacttccgcctacggggac 76477 Query: 232 gaccgcgtcatcgtcgc 248 ||| |||| ||||||| Sbjct: 76476 gacgtcgtcgtcgtcgc 76460 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacctcctcccctcccccg 148 ||||||||||||||||||| || |||||||| |||||||| ||||||||||||||| || Sbjct: 76727 ccatggagaaggcgatcgatcgccagcgcgtcctcctcgcccacctcctcccctcctcct 76668 Query: 149 cctccg 154 |||||| Sbjct: 76667 cctccg 76662 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 465 cgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgt 524 ||||||||| |||||||| ||||| ||||| || ||||| |||| ||||| |||||||| Sbjct: 75438 cgttcctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgt 75379 Query: 525 tgccgctgctataaaagctggtttctatgacatagg 560 |||||| || || |||||||| ||||| |||||||| Sbjct: 75378 tgccgcggccattaaagctgggttctacgacatagg 75343 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 332 aggctgttctggacaaaactggaatcaacccagctgagatcggcgacgttgtagtcggga 391 |||||||||||||||| ||| |||||||| | ||| || || ||| ||||||| || | Sbjct: 75670 aggctgttctggacaacactaagatcaaccctggtgaaattggtgacattgtagttggca 75611 Query: 392 cggtgctaggcccgggttctcagcgtgccattgagtgcagg 432 |||||||||| || || || |||||||| || ||||||||| Sbjct: 75610 cggtgctaggtccaggctcgcagcgtgcaatcgagtgcagg 75570
>ref|NM_100351.2| Arabidopsis thaliana acetyl-CoA C-acyltransferase AT1G04710 mRNA, complete cds Length = 1588 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccgctgct 534 ||||| |||||| |||| || ||||||||||| || || || ||||||||||||||||| Sbjct: 402 agaaccgtgaacagacagtgttcatctgggcttcaggctgttgctgatgttgccgctgcc 461 Query: 535 ataaaagctggtttctatgacat 557 |||||||||||||| |||||||| Sbjct: 462 ataaaagctggtttttatgacat 484
>gb|AY099741.1| Arabidopsis thaliana putative acetyl-CoA acyltransferase (At1g04710) mRNA, complete cds Length = 1589 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccgctgct 534 ||||| |||||| |||| || ||||||||||| || || || ||||||||||||||||| Sbjct: 402 agaaccgtgaacagacagtgttcatctgggcttcaggctgttgctgatgttgccgctgcc 461 Query: 535 ataaaagctggtttctatgacat 557 |||||||||||||| |||||||| Sbjct: 462 ataaaagctggtttttatgacat 484
>gb|BT003415.1| Arabidopsis thaliana putative acetyl-CoA acyltransferase (At1g04710) mRNA, complete cds Length = 1363 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccgctgct 534 ||||| |||||| |||| || ||||||||||| || || || ||||||||||||||||| Sbjct: 370 agaaccgtgaacagacagtgttcatctgggcttcaggctgttgctgatgttgccgctgcc 429 Query: 535 ataaaagctggtttctatgacat 557 |||||||||||||| |||||||| Sbjct: 430 ataaaagctggtttttatgacat 452
>gb|AY085052.1| Arabidopsis thaliana clone 125847 mRNA, complete sequence Length = 1538 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccgctgct 534 ||||| |||||| |||| || ||||||||||| || || || ||||||||||||||||| Sbjct: 381 agaaccgtgaacagacagtgttcatctgggcttcaggctgttgctgatgttgccgctgcc 440 Query: 535 ataaaagctggtttctatgacat 557 |||||||||||||| |||||||| Sbjct: 441 ataaaagctggtttttatgacat 463
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccgctgct 534 ||||| |||||| |||| || ||||||||||| || || || ||||||||||||||||| Sbjct: 10280 agaaccgtgaacagacagtgttcatctgggcttcaggctgttgctgatgttgccgctgcc 10221 Query: 535 ataaaagctggtttctatgacat 557 |||||||||||||| |||||||| Sbjct: 10220 ataaaagctggtttttatgacat 10198
>gb|AF251076.1|AF251076 Oryza sativa 3-ketoacyl-CoA thiolase mRNA, partial cds Length = 533 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 465 cgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgt 524 ||||||||| |||||||| ||||| ||||| || ||||| |||| ||||| |||||||| Sbjct: 65 cgttcctgttagaactgtcaaccggcaatgttcctctggattacaggcagtggctgatgt 124 Query: 525 tgccgctgctataaaagctggtttctatgacataggg 561 |||||| || || |||||||| ||||| ||||||||| Sbjct: 125 tgccgcggccattaaagctgggttctacgacataggg 161
>gb|AC126019.16| Medicago truncatula clone mth2-22p22, complete sequence Length = 130044 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 488 gacaatgctcatctgggctacaagcagtagctgatgttgccgctgctataaaagctggtt 547 ||||||| |||||||| || |||||||| ||||||||||||||| ||||||||||| | Sbjct: 92801 gacaatgttcatctggacttcaagcagttgctgatgttgccgcttacataaaagctgggt 92860 Query: 548 tctatgacat 557 |||||||||| Sbjct: 92861 tctatgacat 92870
>emb|X75329.1|MITHMF5 M.indica (Manila) THMF5 mRNA for 3-ketoacyl-coA thiolase B Length = 1305 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccgctgct 534 ||||||||||| | |||||||||||||| || || ||||| |||||||| || |||||| Sbjct: 409 agaactgtgaataggcaatgctcatctggtcttcaggcagttgctgatgtagctgctgct 468 Query: 535 ataaaagctggtttctatgacat 557 || |||||||| || |||||||| Sbjct: 469 attaaagctggcttttatgacat 491
>ref|NM_128874.2| Arabidopsis thaliana PED1 (PEROXISOME DEFECTIVE 1) AT2G33150 (PED1) mRNA, complete cds Length = 1852 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 503 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 562 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 563 gctgatgtagccgctgccattaaagcgggattttatgacat 603
>gb|AF349530.1| Arabidopsis thaliana putative 3-ketoacyl-CoA thiolase (At2g33150) mRNA, complete cds Length = 1438 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 376 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 435 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 436 gctgatgtagccgctgccattaaagcgggattttatgacat 476
>gb|AF327529.1| Arabidopsis thaliana putative 3-ketoacyl-CoA thiolase (At2g33150) mRNA, complete cds Length = 1752 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 484 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 543 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 544 gctgatgtagccgctgccattaaagcgggattttatgacat 584
>gb|AY063720.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1389 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 376 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 435 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 436 gctgatgtagccgctgccattaaagcgggattttatgacat 476
>gb|AY058176.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1693 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 440 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 499 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 500 gctgatgtagccgctgccattaaagcgggattttatgacat 540
>dbj|AK222103.1| Arabidopsis thaliana mRNA for 3-ketoacyl-CoA thiolase, partial cds, clone: RAFL22-89-F24 Length = 1283 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 21 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 80 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 81 gctgatgtagccgctgccattaaagcgggattttatgacat 121
>gb|AY052702.1| Arabidopsis thaliana At2g33150/F25I18.11 mRNA, complete cds Length = 1753 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 504 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 563 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 564 gctgatgtagccgctgccattaaagcgggattttatgacat 604
>dbj|AB008854.1| Arabidopsis thaliana mRNA for 3-ketoacyl-CoA thiolase, complete cds Length = 1765 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 484 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 543 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 544 gctgatgtagccgctgccattaaagcgggattttatgacat 584
>gb|AY087543.1| Arabidopsis thaliana clone 36488 mRNA, complete sequence Length = 1581 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 457 cctgagaccgttcctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagta 516 ||||| ||||| |||| ||||||||||| |||| |||||||||||||| || || || Sbjct: 452 cctgaaaccgtggctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgtt 511 Query: 517 gctgatgttgccgctgctataaaagctggtttctatgacat 557 |||||||| |||||||| || ||||| || || |||||||| Sbjct: 512 gctgatgtagccgctgccattaaagcgggattttatgacat 552
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete sequence Length = 93158 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 470 ctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccg 529 |||| ||||||||||| |||| |||||||||||||| || || || |||||||| |||| Sbjct: 50556 ctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgttgctgatgtagccg 50615 Query: 530 ctgctataaaagctggtttctatgacat 557 |||| || ||||| || || |||||||| Sbjct: 50616 ctgccattaaagcgggattttatgacat 50643
>dbj|AB008856.1| Arabidopsis thaliana gene for mutated 3-ketoacyl-CoA thiolase, complete cds Length = 3157 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 470 ctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccg 529 |||| ||||||||||| |||| |||||||||||||| || || || |||||||| |||| Sbjct: 1081 ctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgttgctgatgtagccg 1140 Query: 530 ctgctataaaagctggtttctatgacat 557 |||| || ||||| || || |||||||| Sbjct: 1141 ctgccattaaagcgggattttatgacat 1168
>dbj|AB008855.1| Arabidopsis thaliana PED1 gene for 3-ketoacyl-CoA thiolase, complete cds Length = 3156 Score = 63.9 bits (32), Expect = 5e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 470 ctgtgagaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgccg 529 |||| ||||||||||| |||| |||||||||||||| || || || |||||||| |||| Sbjct: 1080 ctgtcagaactgtgaatagacagtgctcatctgggcttcaggctgttgctgatgtagccg 1139 Query: 530 ctgctataaaagctggtttctatgacat 557 |||| || ||||| || || |||||||| Sbjct: 1140 ctgccattaaagcgggattttatgacat 1167
>ref|NM_124265.2| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.2 mRNA, complete cds Length = 1726 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 574 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 626
>ref|NM_001036960.1| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.3 mRNA, complete cds Length = 1610 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 458 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 510
>ref|NM_180826.1| Arabidopsis thaliana PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase AT5G48880 (PKT2) transcript variant AT5G48880.1 mRNA, complete cds Length = 1511 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 359 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 411
>gb|AY136455.1| Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (At5g48880) mRNA, complete cds Length = 1479 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 363 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 415
>gb|AY079026.1| Arabidopsis thaliana AT5g48880/K24G6_22 mRNA, complete cds Length = 1612 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 460 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 512
>gb|BT002594.1| Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (At5g48880) mRNA, complete cds Length = 1330 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 262 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 314
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 71306 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 71254
>gb|AF062591.1|AF062591 Arabidopsis thaliana peroxisomal 3-keto-acyl-CoA thiolase 2 precursor (PKT2) mRNA, complete cds Length = 1691 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 574 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 626
>gb|AF062590.1|AF062590 Arabidopsis thaliana peroxisomal-3-keto-acyl-CoA thiolase 1 (PKT1) mRNA, complete cds Length = 1470 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 355 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 407
>gb|AF062589.1|AF062589 Arabidopsis thaliana 3-keto-acyl-CoA thiolase 2 (PKT2) and 3-keto-acyl-CoA-thiolase 1 (PKT1) genes, complete cds Length = 4938 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 475 agaactgtgaaccgacaatgctcatctgggctacaagcagtagctgatgttgc 527 |||||||| || ||||||||||||| || ||||||||||| ||||||||||| Sbjct: 2806 agaactgtcaatagacaatgctcatcaggactacaagcagttgctgatgttgc 2858
>ref|NM_196831.1| Oryza sativa (japonica cultivar-group) putative thiolase (OSJNBa0018F16.7), mRNA Length = 1778 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 220 tgcttcggggacgaccgcgtcatcgtcgctgcctaccggacaccgatatgcaaggccaag 279 ||||||| |||||| |||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 217 tgcttcgcagacgacgtcgtcatcgtcgctgcctataggacagcaatttgcaagtccaag 276 Query: 280 cgaggaggcttcaagga 296 |||| || |||||||| Sbjct: 277 agaggtggtttcaagga 293 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacct 134 ||||||||||||||||| || ||||| | ||||| ||||| ||||| Sbjct: 80 ccatggagaaggcgatcaacaggcagagggtgcttctcgcccacct 125
>dbj|AK072460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121H13, full insert sequence Length = 1808 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 220 tgcttcggggacgaccgcgtcatcgtcgctgcctaccggacaccgatatgcaaggccaag 279 ||||||| |||||| |||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 367 tgcttcgcagacgacgtcgtcatcgtcgctgcctataggacagcaatttgcaagtccaag 426 Query: 280 cgaggaggcttcaagga 296 |||| || |||||||| Sbjct: 427 agaggtggtttcaagga 443 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacct 134 ||||||||||||||||| || ||||| | ||||| ||||| ||||| Sbjct: 230 ccatggagaaggcgatcaacaggcagagggtgcttctcgcccacct 275
>ref|XM_418525.1| PREDICTED: Gallus gallus similar to Mitogen-activated protein kinase kinase kinase 3 (MAPK/ERK kinase kinase 3) (MEK kinase 3) (MEKK 3) (LOC420419), mRNA Length = 3829 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 273 ggccaagcgaggaggcttcaagga 296 |||||||||||||||||||||||| Sbjct: 2704 ggccaagcgaggaggcttcaagga 2727
>gb|AY104346.1| Zea mays PCO082145 mRNA sequence Length = 1817 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 237 cgtcatcgtcgctgcctaccggacaccgatatgcaaggccaagcgaggaggcttcaagga 296 ||||||||||||||| ||| |||| | || |||||||||||| |||| || |||||||| Sbjct: 355 cgtcatcgtcgctgcttacaggacggcaatttgcaaggccaagagagggggtttcaagga 414
>ref|NM_193885.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1248 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 gcgcacctcctcccctcccccgcctccgccg 157 |||| ||||||||||||| |||||||||||| Sbjct: 145 gcgctcctcctcccctcctccgcctccgccg 175
>emb|AL035669.43|HS885L7 Human DNA sequence from clone RP5-885L7 on chromosome 20q13.2-13.33 Contains the 3' end of the NTSR1 gene for high affinity neurotensin receptor 1, the C20orf20 gene, the OGFR gene for opioid growth factor receptor, the COL9A3 gene for collagen IX alpha 3, the C20orf143 gene, the TCFL5 gene for basic helix-loop-helix transcription factor-like 5, the ARF4P2 gene for ADP-ribosylation factor 4 pseudogene 2, the 3' end of the DATF1 gene for death associated transcription factor 1, two novel genes and seven CpG islands, complete sequence Length = 160241 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 70 ctccctctccctgcttcctccatggag 96 ||||||||||||||||||||| ||||| Sbjct: 14492 ctccctctccctgcttcctccctggag 14518
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 gcgcacctcctcccctcccccgcctccgccg 157 |||| ||||||||||||| |||||||||||| Sbjct: 15627136 gcgctcctcctcccctcctccgcctccgccg 15627166 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccctcccccgcctccgccg 157 |||||||||||||||||||| Sbjct: 37317458 cccctcccccgcctccgccg 37317477 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgcacctcctcccctccccc 147 |||||||||||||||||||| Sbjct: 28733272 cgcacctcctcccctccccc 28733291
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 gcgcacctcctcccctcccccgcctccgccg 157 |||| ||||||||||||| |||||||||||| Sbjct: 65033 gcgctcctcctcccctcctccgcctccgccg 65063
>dbj|AK107503.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E03, full insert sequence Length = 2089 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 gcgcacctcctcccctcccccgcctccgccg 157 |||| ||||||||||||| |||||||||||| Sbjct: 184 gcgctcctcctcccctcctccgcctccgccg 214
>dbj|AK059266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B02, full insert sequence Length = 1478 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 gcgcacctcctcccctcccccgcctccgccg 157 |||| ||||||||||||| |||||||||||| Sbjct: 188 gcgctcctcctcccctcctccgcctccgccg 218
>ref|XM_478901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2059 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctccgccg 157 ||||||||||| |||||||||||||| Sbjct: 88 cctcctcccctgccccgcctccgccg 113
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacct 134 ||||||||||||||||| || ||||| | ||||| ||||| ||||| Sbjct: 140341 ccatggagaaggcgatcaacaggcagagggtgcttctcgcccacct 140386 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 gcgtgcgcggccggggacagcgccgcctacca 209 |||||||| || |||||||||||||| ||||| Sbjct: 140531 gcgtgcgccgcgggggacagcgccgcgtacca 140562
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacct 134 ||||||||||||||||| || ||||| | ||||| ||||| ||||| Sbjct: 96624 ccatggagaaggcgatcaacaggcagagggtgcttctcgcccacct 96579 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 178 gcgtgcgcggccggggacagcgccgcctacca 209 |||||||| || |||||||||||||| ||||| Sbjct: 96434 gcgtgcgccgcgggggacagcgccgcgtacca 96403
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacct 134 ||||||||||||||||| || ||||| | ||||| ||||| ||||| Sbjct: 16261452 ccatggagaaggcgatcaacaggcagagggtgcttctcgcccacct 16261497 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 gcgtgcgcggccggggacagcgccgcctacca 209 |||||||| || |||||||||||||| ||||| Sbjct: 16261642 gcgtgcgccgcgggggacagcgccgcgtacca 16261673
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 cgcaaggggatctccctctccc 80 |||||||||||||||||||||| Sbjct: 25373408 cgcaaggggatctccctctccc 25373429 Score = 42.1 bits (21), Expect = 1.9 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 130 cacctcctcc-cctcccccgcctccgccg 157 |||||||||| |||||||||||||||||| Sbjct: 3726524 cacctcctcctcctcccccgcctccgccg 3726496 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tcctcccctcccccgcctccgccg 157 ||||||||||||||||| |||||| Sbjct: 10374355 tcctcccctcccccgccgccgccg 10374332
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctccgccg 157 ||||||||||| |||||||||||||| Sbjct: 23566196 cctcctcccctgccccgcctccgccg 23566221
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctccgccg 157 ||||||||||| |||||||||||||| Sbjct: 18637 cctcctcccctgccccgcctccgccg 18662
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctccgccg 157 ||||||||||| |||||||||||||| Sbjct: 126589 cctcctcccctgccccgcctccgccg 126614
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 cgcaaggggatctccctctccc 80 |||||||||||||||||||||| Sbjct: 4724 cgcaaggggatctccctctccc 4745
>dbj|AK071674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L13, full insert sequence Length = 2059 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctccgccg 157 ||||||||||| |||||||||||||| Sbjct: 88 cctcctcccctgccccgcctccgccg 113
>dbj|D21250.1|CP6PSL42 Closterium peracerosum-strigosum-littorale complex mRNA for 42kDa subunit of protoplast-release-inducing protein, complete cds Length = 1202 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 cctcccctcccccgcctccgcc 156 |||||||||||||||||||||| Sbjct: 170 cctcccctcccccgcctccgcc 191
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 89 ccatggagaaggcgatcgaccggcagcgcgtgctcctcgcgcacct 134 ||||||||||||||||| || ||||| | ||||| ||||| ||||| Sbjct: 16269700 ccatggagaaggcgatcaacaggcagagggtgcttctcgcccacct 16269745 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 178 gcgtgcgcggccggggacagcgccgcctacca 209 |||||||| || |||||||||||||| ||||| Sbjct: 16269890 gcgtgcgccgcgggggacagcgccgcgtacca 16269921
>dbj|AB000909.1| Closterium peracerosum-strigosum-littorale complex gene for 42-kDa subunit of protoplast-release-inducing protein, complete cds Length = 4205 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 cctcccctcccccgcctccgcc 156 |||||||||||||||||||||| Sbjct: 2010 cctcccctcccccgcctccgcc 2031
>gb|AC140451.3| Mus musculus BAC clone RP23-52L6 from chromosome 14, complete sequence Length = 224897 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 458 ctgagaccgttcctgtgagaactgt 482 |||||||| |||||||||||||||| Sbjct: 155148 ctgagacctttcctgtgagaactgt 155172
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctc 152 ||||||||||||||||||||| Sbjct: 7129931 cctcctcccctcccccgcctc 7129951 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 125 tcgcgcacctcctcccctcccccgcctccgccg 157 |||||| ||||||||||||| || ||||||||| Sbjct: 5698985 tcgcgctcctcctcccctcctcctcctccgccg 5699017 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctccgccg 157 ||||||| ||||||||||||| |||||| Sbjct: 5675199 cacctccacccctcccccgccgccgccg 5675226
>gb|AC117539.6| Papio hamadryas, clone RP41-208E11, complete sequence Length = 208592 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctc 152 ||||||||||||||||||||| Sbjct: 113853 cctcctcccctcccccgcctc 113873
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 42.1 bits (21), Expect = 1.9 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 130 cacctcctcc-cctcccccgcctccgccg 157 |||||||||| |||||||||||||||||| Sbjct: 50021 cacctcctcctcctcccccgcctccgccg 49993
>dbj|AK072568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131I01, full insert sequence Length = 1174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctc 152 ||||||||||||||||||||| Sbjct: 174 cctcctcccctcccccgcctc 194
>dbj|AK067820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117D12, full insert sequence Length = 793 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 125 tcgcgcacctcctcccctcccccgcctccgccg 157 |||||| ||||||||||||| || ||||||||| Sbjct: 198 tcgcgctcctcctcccctcctcctcctccgccg 230
>dbj|AP000911.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-713P17, complete sequence Length = 185957 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 135 cctcccctcccccgcctccgccggcagccagct 167 |||||||||||||||| ||||| ||||||||| Sbjct: 13473 cctcccctcccccgccgccgcccccagccagct 13505
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 cctcctcccctcccccgcctc 152 ||||||||||||||||||||| Sbjct: 1796403 cctcctcccctcccccgcctc 1796383
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctc 152 ||||||||||||||||||||| Sbjct: 7129810 cctcctcccctcccccgcctc 7129830 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 125 tcgcgcacctcctcccctcccccgcctccgccg 157 |||||| ||||||||||||| || ||||||||| Sbjct: 5698978 tcgcgctcctcctcccctcctcctcctccgccg 5699010 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctccgccg 157 ||||||| ||||||||||||| |||||| Sbjct: 5675192 cacctccacccctcccccgccgccgccg 5675219
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcctc 152 ||||||||||||||||||||| Sbjct: 38231 cctcctcccctcccccgcctc 38251
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 125 tcgcgcacctcctcccctcccccgcctccgccg 157 |||||| ||||||||||||| || ||||||||| Sbjct: 53508 tcgcgctcctcctcccctcctcctcctccgccg 53540 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctccgccg 157 ||||||| ||||||||||||| |||||| Sbjct: 29722 cacctccacccctcccccgccgccgccg 29749
>dbj|AB005290.1| Oryza sativa (japonica cultivar-group) mRNA for plastid RNA polymerase sigma factor, complete cds Length = 2026 Score = 42.1 bits (21), Expect = 1.9 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 130 cacctcctcc-cctcccccgcctccgccg 157 |||||||||| |||||||||||||||||| Sbjct: 307 cacctcctcctcctcccccgcctccgccg 279
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 cgcgtgctcctcgcgcacctcctc 138 |||| ||||||||||||||||||| Sbjct: 3524202 cgcgcgctcctcgcgcacctcctc 3524225
>gb|AC160972.4| Mus musculus BAC clone RP24-571D21 from chromosome 12, complete sequence Length = 184921 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccctctccctgcttcctcca 91 |||||||||||||||||||| Sbjct: 153302 ccctctccctgcttcctcca 153283
>gb|AC102739.7| Mus musculus chromosome 5, clone RP24-309H3, complete sequence Length = 191542 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 129 gcacctcctcccctcccccgcctccgccggca 160 ||||||||||||||| ||| ||||| |||||| Sbjct: 100765 gcacctcctcccctcaccctcctcctccggca 100796
>ref|XM_481176.1| Oryza sativa (japonica cultivar-group), mRNA Length = 471 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 tcctcccctcccccgcctccgccg 157 ||||||||||||||||| |||||| Sbjct: 40 tcctcccctcccccgccgccgccg 63
>ref|XM_507055.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1202_E07.32 mRNA Length = 1810 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctcc 153 |||||||||||||||| ||||||| Sbjct: 342 cacctcctcccctccctcgcctcc 365
>ref|XM_468435.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1656 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctcc 153 |||||||||||||||| ||||||| Sbjct: 184 cacctcctcccctccctcgcctcc 207
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cccccgcctccgccggcagc 162 |||||||||||||||||||| Sbjct: 811534 cccccgcctccgccggcagc 811515
>ref|NM_190718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 696 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccctcccccgcctccgccg 157 |||||||||||||||||||| Sbjct: 211 cccctcccccgcctccgccg 230
>gb|BT018746.1| Zea mays clone EL01N0521H09.d mRNA sequence Length = 1619 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cctcccctcccccgcctccg 154 |||||||||||||||||||| Sbjct: 263 cctcccctcccccgcctccg 282
>gb|AC108767.10| Mus musculus chromosome 3, clone RP24-377E5, complete sequence Length = 167878 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ctcctcccctcccccgcctc 152 |||||||||||||||||||| Sbjct: 157535 ctcctcccctcccccgcctc 157554
>gb|CP000146.1| Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence Length = 105284 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctcctcgcgcacctcctcc 139 |||||||||||||||||||| Sbjct: 46111 gctcctcgcgcacctcctcc 46130
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cctcccctcccccgcctccg 154 |||||||||||||||||||| Sbjct: 76077 cctcccctcccccgcctccg 76058
>ref|XM_323400.1| Neurospora crassa OR74A predicted protein (NCU04082.1) partial mRNA Length = 354 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cctcccccgcctccgccggc 159 |||||||||||||||||||| Sbjct: 131 cctcccccgcctccgccggc 150
>ref|XM_950985.1| Neurospora crassa OR74A hypothetical protein (NCU04082.1) partial mRNA Length = 354 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cctcccccgcctccgccggc 159 |||||||||||||||||||| Sbjct: 131 cctcccccgcctccgccggc 150
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cgcgtgctcctcgcgcacct 134 |||||||||||||||||||| Sbjct: 607251 cgcgtgctcctcgcgcacct 607232
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tcctcccctcccccgcctccgccg 157 ||||| |||||||||||||||||| Sbjct: 8157159 tcctcgcctcccccgcctccgccg 8157136
>ref|XR_002627.1| PREDICTED: Mus musculus similar to glycogen synthase kinase 3 alpha (LOC621984), mRNA Length = 1653 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcctccgaccccgagctc 47 |||||||||||||||||||| Sbjct: 197 cctcctccgaccccgagctc 178
>ref|XR_004704.1| PREDICTED: Mus musculus similar to glycogen synthase kinase 3 alpha (LOC621984), mRNA Length = 1653 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcctccgaccccgagctc 47 |||||||||||||||||||| Sbjct: 197 cctcctccgaccccgagctc 178
>gb|AC124773.4| Mus musculus BAC clone RP23-49B23 from 3, complete sequence Length = 216860 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ctcctcccctcccccgcctc 152 |||||||||||||||||||| Sbjct: 46493 ctcctcccctcccccgcctc 46512
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 gaactgtgaaccgacaatgc 495 |||||||||||||||||||| Sbjct: 2209656 gaactgtgaaccgacaatgc 2209675
>emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chromosome 1 Contains a CpG island, complete sequence Length = 171985 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcctcccctcccccgcctcc 153 |||||||||||||||||||| Sbjct: 142972 tcctcccctcccccgcctcc 142991
>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical class II region, partial sequence Length = 130898 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctccgccggcag 161 ||||||| | ||||||||||| |||||||||| Sbjct: 42728 cacctccccgcctcccccgcccccgccggcag 42759
>gb|AY152835.1| Felis catus clone PAC g7 major histocompatiblity complex classical class II region, partial sequence Length = 77680 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctccgccggcag 161 ||||||| | ||||||||||| |||||||||| Sbjct: 64602 cacctccccgcctcccccgcccccgccggcag 64633
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cgcgtgctcctcgcgcacct 134 |||||||||||||||||||| Sbjct: 1927027 cgcgtgctcctcgcgcacct 1927008
>gb|AC096640.2| Homo sapiens chromosome 1 clone RP11-332J14, complete sequence Length = 167346 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 tctccctctccctgcttcct 88 |||||||||||||||||||| Sbjct: 131356 tctccctctccctgcttcct 131375
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gctcctcgcgcacctcctcc 139 |||||||||||||||||||| Sbjct: 4336457 gctcctcgcgcacctcctcc 4336476
>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence Length = 188117 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agctcctcagagtcagcgca 62 |||||||||||||||||||| Sbjct: 21118 agctcctcagagtcagcgca 21099
>gb|AY029069.1| Leishmania tarentolae 3' terminal uridylyl transferase (3' TUTase) gene, complete cds; nuclear gene for mitochondrial product Length = 5990 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cgccgcctaccagaggacct 217 |||||||||||||||||||| Sbjct: 4042 cgccgcctaccagaggacct 4061
>gb|AC092392.2| Homo sapiens chromosome 1 clone RP4-544H6, complete sequence Length = 98286 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 129 gcacctcctcccctcccccgcctccgcc 156 |||||||||||| |||||||||||||| Sbjct: 45038 gcacctcctcccagcccccgcctccgcc 45011
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgcgtgctcctcgcgcacct 134 |||||||||||||||||||| Sbjct: 588353 cgcgtgctcctcgcgcacct 588372
>dbj|AP003390.1| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2523D13, complete sequences Length = 221091 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cctctccctgcttcctccat 92 |||||||||||||||||||| Sbjct: 87861 cctctccctgcttcctccat 87880
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cctcccctcccccgcctccg 154 |||||||||||||||||||| Sbjct: 19593002 cctcccctcccccgcctccg 19592983
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gcgtcggcgtgcgcggccgg 191 |||||||||||||||||||| Sbjct: 21549356 gcgtcggcgtgcgcggccgg 21549375 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ctcctcccctcccccgcctc 152 |||||||||||||||||||| Sbjct: 10443039 ctcctcccctcccccgcctc 10443020
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tcctcccctcccccgcctccgccg 157 ||||| |||||||||||||||||| Sbjct: 8154994 tcctcgcctcccccgcctccgccg 8154971
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cgccggcagccagctttccg 172 |||||||||||||||||||| Sbjct: 2007094 cgccggcagccagctttccg 2007113
>gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, complete sequence Length = 174941 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 agctcctcagagtcagcgca 62 |||||||||||||||||||| Sbjct: 171557 agctcctcagagtcagcgca 171538
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tcctcccctcccccgcctccgccg 157 ||||| |||||||||||||||||| Sbjct: 88589 tcctcgcctcccccgcctccgccg 88566
>gb|AC021360.15| Homo sapiens chromosome 15, clone RP11-25D17, complete sequence Length = 147133 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 agctcctcagagtcagcgca 62 |||||||||||||||||||| Sbjct: 40172 agctcctcagagtcagcgca 40191
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgcacctcctcccctccccc 147 |||||||||||||||||||| Sbjct: 116346 cgcacctcctcccctccccc 116365
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccctcccccgcctccgccg 157 |||||||||||||||||||| Sbjct: 29492 cccctcccccgcctccgccg 29511
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcgtcggcgtgcgcggccg 190 |||||||||||||||||||| Sbjct: 6723570 cgcgtcggcgtgcgcggccg 6723589
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1026E06 Length = 162784 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ctcctcccctcccccgcctc 152 |||||||||||||||||||| Sbjct: 19653 ctcctcccctcccccgcctc 19634
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctccgccg 157 |||||||||||| || |||||||||||| Sbjct: 5657 cacctcctccccgccgccgcctccgccg 5630
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ccgcgtcggcgtgcgcggcc 189 |||||||||||||||||||| Sbjct: 5253188 ccgcgtcggcgtgcgcggcc 5253207
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gcgtcggcgtgcgcggccgg 191 |||||||||||||||||||| Sbjct: 106540 gcgtcggcgtgcgcggccgg 106559
>gb|AC102106.14| Mus musculus chromosome 18, clone RP23-92B24, complete sequence Length = 230823 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 atctccctctccctgcttcc 87 |||||||||||||||||||| Sbjct: 35155 atctccctctccctgcttcc 35136
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctccgccg 157 |||||||||||| || |||||||||||| Sbjct: 99718 cacctcctccccgccgccgcctccgccg 99691
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ctcctcccctcccccgcctc 152 |||||||||||||||||||| Sbjct: 86158 ctcctcccctcccccgcctc 86139
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctcc 153 |||||||||||||||| ||||||| Sbjct: 54072 cacctcctcccctccctcgcctcc 54049
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctcc 153 |||||||||||||||| ||||||| Sbjct: 137378 cacctcctcccctccctcgcctcc 137355
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cctcccctcccccgcctccg 154 |||||||||||||||||||| Sbjct: 2484 cctcccctcccccgcctccg 2465
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tcctcccctcccccgcctccgccg 157 ||||||||||||||||| |||||| Sbjct: 75313 tcctcccctcccccgccgccgccg 75290
>dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A08, full insert sequence Length = 2096 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cctcccctcccccgcctccg 154 |||||||||||||||||||| Sbjct: 58 cctcccctcccccgcctccg 77
>dbj|AK121679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H08, full insert sequence Length = 2059 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cctcccctcccccgcctccg 154 |||||||||||||||||||| Sbjct: 15 cctcccctcccccgcctccg 34
>dbj|AK108344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B04, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cccctcccccgcctccgccg 157 |||||||||||||||||||| Sbjct: 302 cccctcccccgcctccgccg 321
>dbj|AK104581.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B12, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctccgccg 157 |||||||||||| || |||||||||||| Sbjct: 210 cacctcctccccgccgccgcctccgccg 183
>dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081D06, full insert sequence Length = 3221 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgcacctcctcccctccccc 147 |||||||||||||||||||| Sbjct: 30 cgcacctcctcccctccccc 49
>dbj|AK100771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120A02, full insert sequence Length = 1810 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctcc 153 |||||||||||||||| ||||||| Sbjct: 342 cacctcctcccctccctcgcctcc 365
>dbj|AK100160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020P04, full insert sequence Length = 2136 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 tcctcccctcccccgcctccgccg 157 ||||| |||||||||||||||||| Sbjct: 524 tcctcgcctcccccgcctccgccg 547
>dbj|AK072343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F14, full insert sequence Length = 1866 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 tcctcccctcccccgcctccgccg 157 ||||| |||||||||||||||||| Sbjct: 284 tcctcgcctcccccgcctccgccg 307
>emb|AL391153.3|CNS06C7Z Human chromosome 14 DNA sequence BAC C-2576L4 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172336 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cctcctcccctcccccgcct 151 |||||||||||||||||||| Sbjct: 115322 cctcctcccctcccccgcct 115341
>dbj|AK064805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D15, full insert sequence Length = 985 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctccgccg 157 |||||||||||| || |||||||||||| Sbjct: 220 cacctcctccccgccgccgcctccgccg 193
>dbj|AK060511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D06, full insert sequence Length = 1656 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cacctcctcccctcccccgcctcc 153 |||||||||||||||| ||||||| Sbjct: 184 cacctcctcccctccctcgcctcc 207
>dbj|AK059303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F10, full insert sequence Length = 1054 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 cacctcctcccctcccccgcctccgccg 157 |||||||||||| || |||||||||||| Sbjct: 211 cacctcctccccgccgccgcctccgccg 184
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cttcaaggacacgtacccggagga 311 |||||||| ||||||||||||||| Sbjct: 2368268 cttcaaggtcacgtacccggagga 2368291
>emb|AJ891077.1| Setifer setosus partial adrab2 gene for alpha 2B adrenergic receptor Length = 1149 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 cctcccccgcctccgccggcagcc 163 ||||||| |||||||||||||||| Sbjct: 880 cctcccctgcctccgccggcagcc 903
>gb|DQ278492.1| Lysobacter lactamgenus nonribosomal peptide synthetase - polyketide synthase hybrid (cpbI) gene, complete cds Length = 15150 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ccgcgtcggcgtgcgcggcc 189 |||||||||||||||||||| Sbjct: 7951 ccgcgtcggcgtgcgcggcc 7932
>emb|AL928663.4| Mouse DNA sequence from clone RP23-315A20 on chromosome 2, complete sequence Length = 94702 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tcctgtgagaactgtgaacc 487 |||||||||||||||||||| Sbjct: 12324 tcctgtgagaactgtgaacc 12343
>emb|AL807252.5| Mouse DNA sequence from clone RP23-456B18 on chromosome 4, complete sequence Length = 195718 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tctccctctccctgcttcct 88 |||||||||||||||||||| Sbjct: 57127 tctccctctccctgcttcct 57108
>emb|AL672008.8| Mouse DNA sequence from clone RP23-389M3 on chromosome X, complete sequence Length = 160571 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cctcctccgaccccgagctc 47 |||||||||||||||||||| Sbjct: 94386 cctcctccgaccccgagctc 94367 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,525,966 Number of Sequences: 3902068 Number of extensions: 4525966 Number of successful extensions: 110599 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 108643 Number of HSP's gapped (non-prelim): 1956 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
