ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25h03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1440 Score = 184 bits (93), Expect = 2e-43 Identities = 306/377 (81%) Strand = Plus / Plus Query: 105 tgcgacttcccggcgatcttcaacttcggcgactcctactcggacaccggagccttcccg 164 ||||| |||||||||||||||||||||||||||||| ||||||||||||| | || || Sbjct: 195 tgcgatttcccggcgatcttcaacttcggcgactccaactcggacaccggcgggctctcg 254 Query: 165 gccctcttcccggcggtgcagccgccctacggccagaccttcttcggcatgccagccggg 224 |||||| || | | ||||| |||||| | ||||| ||||| |||||||||||| ||||| Sbjct: 255 gccctcatcgccgtggtgccgccgccgttcggccggacctacttcggcatgcccgccggc 314 Query: 225 aggcagagcgacggccgcctcaccatcgacttcatggctcaaagcctggggctgcgttac 284 || ||||||||||||||||||||||||||||||||||| ||||||||| | |||||| Sbjct: 315 cggttcagcgacggccgcctcaccatcgacttcatggctcagagcctggggattcgttac 374 Query: 285 ctgaatgcgtatctggattcgctagggagcaacttcacgcagggagccaatttcgcgagc 344 || | ||| || || ||||| | ||||| ||||||| || || ||||||||||||| Sbjct: 375 ctcagtgcatacctcgattcagttgggagtaacttcagtcaaggtgccaatttcgcgacg 434 Query: 345 gccgctggaactatcagacgagtgaacgggagcttgtggacctccggatacagccccatt 404 ||||||| | ||||||| || ||| || ||| | | |||||| |||||| || Sbjct: 435 gccgctgcgtcgatcagaccagcgaatggcagcatcttcgtctccggcatcagcccgatc 494 Query: 405 tccttggacgtgcagatctggcaattccagcagttcatcaacaggagccgcttcgtctac 464 ||| |||||||||||| | | |||||| | |||||||||||||| |||| ||||| || Sbjct: 495 tccctggacgtgcagaccagccaattcgaacagttcatcaacagaagccagttcgtttat 554 Query: 465 aacaacataggtggaat 481 | ||||||||||||||| Sbjct: 555 agcaacataggtggaat 571
>dbj|AK071404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092E11, full insert sequence Length = 1439 Score = 184 bits (93), Expect = 2e-43 Identities = 306/377 (81%) Strand = Plus / Plus Query: 105 tgcgacttcccggcgatcttcaacttcggcgactcctactcggacaccggagccttcccg 164 ||||| |||||||||||||||||||||||||||||| ||||||||||||| | || || Sbjct: 194 tgcgatttcccggcgatcttcaacttcggcgactccaactcggacaccggcgggctctcg 253 Query: 165 gccctcttcccggcggtgcagccgccctacggccagaccttcttcggcatgccagccggg 224 |||||| || | | ||||| |||||| | ||||| ||||| |||||||||||| ||||| Sbjct: 254 gccctcatcgccgtggtgccgccgccgttcggccggacctacttcggcatgcccgccggc 313 Query: 225 aggcagagcgacggccgcctcaccatcgacttcatggctcaaagcctggggctgcgttac 284 || ||||||||||||||||||||||||||||||||||| ||||||||| | |||||| Sbjct: 314 cggttcagcgacggccgcctcaccatcgacttcatggctcagagcctggggattcgttac 373 Query: 285 ctgaatgcgtatctggattcgctagggagcaacttcacgcagggagccaatttcgcgagc 344 || | ||| || || ||||| | ||||| ||||||| || || ||||||||||||| Sbjct: 374 ctcagtgcatacctcgattcagttgggagtaacttcagtcaaggtgccaatttcgcgacg 433 Query: 345 gccgctggaactatcagacgagtgaacgggagcttgtggacctccggatacagccccatt 404 ||||||| | ||||||| || ||| || ||| | | |||||| |||||| || Sbjct: 434 gccgctgcgtcgatcagaccagcgaatggcagcatcttcgtctccggcatcagcccgatc 493 Query: 405 tccttggacgtgcagatctggcaattccagcagttcatcaacaggagccgcttcgtctac 464 ||| |||||||||||| | | |||||| | |||||||||||||| |||| ||||| || Sbjct: 494 tccctggacgtgcagaccagccaattcgaacagttcatcaacagaagccagttcgtttat 553 Query: 465 aacaacataggtggaat 481 | ||||||||||||||| Sbjct: 554 agcaacataggtggaat 570
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 137 bits (69), Expect = 5e-29 Identities = 135/157 (85%) Strand = Plus / Minus Query: 105 tgcgacttcccggcgatcttcaacttcggcgactcctactcggacaccggagccttcccg 164 ||||| |||||||||||||||||||||||||||||| ||||||||||||| | || || Sbjct: 23762687 tgcgatttcccggcgatcttcaacttcggcgactccaactcggacaccggcgggctctcg 23762628 Query: 165 gccctcttcccggcggtgcagccgccctacggccagaccttcttcggcatgccagccggg 224 |||||| || | | ||||| |||||| | ||||| ||||| |||||||||||| ||||| Sbjct: 23762627 gccctcatcgccgtggtgccgccgccgttcggccggacctacttcggcatgcccgccggc 23762568 Query: 225 aggcagagcgacggccgcctcaccatcgacttcatgg 261 || ||||||||||||||||||||||||||||||| Sbjct: 23762567 cggttcagcgacggccgcctcaccatcgacttcatgg 23762531 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| |||| | || | |||||||||||||| |||| Sbjct: 23768416 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcca 23768357 Query: 455 cttcgtctacaacaacataggtg 477 |||||||| ||||||| ||||| Sbjct: 23768356 gttcgtctataacaacaaaggtg 23768334 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 |||||| || ||| |||||||||||| | | |||||| | |||||||||||||| |||| Sbjct: 23762313 cagcccgatctccctggacgtgcagaccagccaattcgaacagttcatcaacagaagcca 23762254 Query: 455 cttcgtctacaacaacataggtg 477 ||||| || | ||||||||||| Sbjct: 23762253 gttcgtttatagcaacataggtg 23762231 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Minus Query: 185 gccgccctacggccagaccttcttcggcatgccagccgggaggcagagcgacggccgcct 244 ||||||| ||||| |||||||||||||||||| | ||| | | ||||||||||||| Sbjct: 23769972 gccgcccaacggcaggaccttcttcggcatgcccgtcggccgctactgcgacggccgcct 23769913 Query: 245 caccatcgacttcat 259 | |||||||||||| Sbjct: 23769912 cgtcatcgacttcat 23769898 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 110 cttcccggcgatcttcaacttcggcgactcctactcggacac 151 ||||||||| | |||||||||||||||||| |||| ||||| Sbjct: 23770047 cttcccggccgtgttcaacttcggcgactccaactccgacac 23770006
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 137 bits (69), Expect = 5e-29 Identities = 135/157 (85%) Strand = Plus / Minus Query: 105 tgcgacttcccggcgatcttcaacttcggcgactcctactcggacaccggagccttcccg 164 ||||| |||||||||||||||||||||||||||||| ||||||||||||| | || || Sbjct: 17617 tgcgatttcccggcgatcttcaacttcggcgactccaactcggacaccggcgggctctcg 17558 Query: 165 gccctcttcccggcggtgcagccgccctacggccagaccttcttcggcatgccagccggg 224 |||||| || | | ||||| |||||| | ||||| ||||| |||||||||||| ||||| Sbjct: 17557 gccctcatcgccgtggtgccgccgccgttcggccggacctacttcggcatgcccgccggc 17498 Query: 225 aggcagagcgacggccgcctcaccatcgacttcatgg 261 || ||||||||||||||||||||||||||||||| Sbjct: 17497 cggttcagcgacggccgcctcaccatcgacttcatgg 17461 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| |||| | || | |||||||||||||| |||| Sbjct: 23346 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcca 23287 Query: 455 cttcgtctacaacaacataggtg 477 |||||||| ||||||| ||||| Sbjct: 23286 gttcgtctataacaacaaaggtg 23264 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 |||||| || ||| |||||||||||| | | |||||| | |||||||||||||| |||| Sbjct: 17243 cagcccgatctccctggacgtgcagaccagccaattcgaacagttcatcaacagaagcca 17184 Query: 455 cttcgtctacaacaacataggtg 477 ||||| || | ||||||||||| Sbjct: 17183 gttcgtttatagcaacataggtg 17161 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Minus Query: 185 gccgccctacggccagaccttcttcggcatgccagccgggaggcagagcgacggccgcct 244 ||||||| ||||| |||||||||||||||||| | ||| | | ||||||||||||| Sbjct: 24902 gccgcccaacggcaggaccttcttcggcatgcccgtcggccgctactgcgacggccgcct 24843 Query: 245 caccatcgacttcat 259 | |||||||||||| Sbjct: 24842 cgtcatcgacttcat 24828 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 110 cttcccggcgatcttcaacttcggcgactcctactcggacac 151 ||||||||| | |||||||||||||||||| |||| ||||| Sbjct: 24977 cttcccggccgtgttcaacttcggcgactccaactccgacac 24936
>ref|XM_478921.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1757 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| |||| | || | |||||||||||||| |||| Sbjct: 791 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcca 850 Query: 455 cttcgtctacaacaacataggtggaatctac 485 |||||||| ||||||| ||||||||||||| Sbjct: 851 gttcgtctataacaacaaaggtggaatctac 881 Score = 69.9 bits (35), Expect = 9e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 185 gccgccctacggccagaccttcttcggcatgccagccgggaggcagagcgacggccgcct 244 ||||||| ||||| |||||||||||||||||| | ||| | | ||||||||||||| Sbjct: 581 gccgcccaacggcaggaccttcttcggcatgcccgtcggccgctactgcgacggccgcct 640 Query: 245 caccatcgacttcatggctcaaagcctggggctgcgttacctgaatgcgta 295 | |||||||||||| ||| |||||||||| |||| |||||| | |||||| Sbjct: 641 cgtcatcgacttcatcgctgaaagcctgggactgccttacctcagtgcgta 691 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 110 cttcccggcgatcttcaacttcggcgactcctactcggacac 151 ||||||||| | |||||||||||||||||| |||| ||||| Sbjct: 506 cttcccggccgtgttcaacttcggcgactccaactccgacac 547
>ref|XM_478922.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1115 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| |||| | || | |||||||||||||| |||| Sbjct: 140 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcca 199 Query: 455 cttcgtctacaacaacataggtggaatctac 485 |||||||| ||||||| ||||||||||||| Sbjct: 200 gttcgtctataacaacaaaggtggaatctac 230
>dbj|AK099293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135D02, full insert sequence Length = 1126 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| |||| | || | |||||||||||||| |||| Sbjct: 160 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcca 219 Query: 455 cttcgtctacaacaacataggtggaatctac 485 |||||||| ||||||| ||||||||||||| Sbjct: 220 gttcgtctataacaacaaaggtggaatctac 250 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 238 gccgcctcaccatcgacttcatggctcaaagcctggggctgcgttacctgaatgcgta 295 |||||||| |||||||||||| ||| ||||||||| |||| |||||| | |||||| Sbjct: 3 gccgcctcgtcatcgacttcatcgctggaagcctgggactgccttacctcagtgcgta 60
>dbj|AK073754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067M09, full insert sequence Length = 1757 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| |||| | || | |||||||||||||| |||| Sbjct: 791 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcca 850 Query: 455 cttcgtctacaacaacataggtggaatctac 485 |||||||| ||||||| ||||||||||||| Sbjct: 851 gttcgtctataacaacaaaggtggaatctac 881 Score = 69.9 bits (35), Expect = 9e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 185 gccgccctacggccagaccttcttcggcatgccagccgggaggcagagcgacggccgcct 244 ||||||| ||||| |||||||||||||||||| | ||| | | ||||||||||||| Sbjct: 581 gccgcccaacggcaggaccttcttcggcatgcccgtcggccgctactgcgacggccgcct 640 Query: 245 caccatcgacttcatggctcaaagcctggggctgcgttacctgaatgcgta 295 | |||||||||||| ||| |||||||||| |||| |||||| | |||||| Sbjct: 641 cgtcatcgacttcatcgctgaaagcctgggactgccttacctcagtgcgta 691 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 110 cttcccggcgatcttcaacttcggcgactcctactcggacac 151 ||||||||| | |||||||||||||||||| |||| ||||| Sbjct: 506 cttcccggccgtgttcaacttcggcgactccaactccgacac 547
>dbj|AK060131.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B10, full insert sequence Length = 1117 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| |||| | || | |||||||||||||| |||| Sbjct: 142 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcca 201 Query: 455 cttcgtctacaacaacataggtggaatctac 485 |||||||| ||||||| ||||||||||||| Sbjct: 202 gttcgtctataacaacaaaggtggaatctac 232
>dbj|AB093208.1| Zea mays ache mRNA for hypothetical protein, complete cds Length = 1471 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| ||||| | || | || ||||||||||| |||| Sbjct: 481 cagccccatttccttggacgtgcagttctgggagtttgaacaattcatcaacagaagcca 540 Query: 455 cttcgtctacaacaacataggtggaatctac 485 ||||||||||||||| ||| || |||||| Sbjct: 541 actcgtctacaacaacaaaggcggtatctac 571 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Plus Query: 185 gccgccctacggccagaccttcttcggcatgccagccgggaggcagagcgacggccgcct 244 ||||||| ||||| |||||||||||||||||| ||||| | | |||| || ||||| Sbjct: 271 gccgcccaacggcaggaccttcttcggcatgcccgccggccgctactgcgatggtcgcct 330 Query: 245 caccatcgacttcatggctcaaagcctggggctgcgttacctgaatgcgtatctggattc 304 | |||||||||||| ||| |||||||||| ||| | |||| | |||||| ||| | || Sbjct: 331 cgtcatcgacttcatcgctgaaagcctgggactgactcacctcagtgcgtacctgaactc 390 Query: 305 gctagggagcaacttcacgcagggagccaa 334 | | || ||||||||||| ||||||||||| Sbjct: 391 gattggaagcaacttcacacagggagccaa 420 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 109 acttcccggcgatcttcaacttcggcgactcctactcggacac 151 |||||||||| | |||||||||||||||||| |||||||||| Sbjct: 195 acttcccggccgtgttcaacttcggcgactccaactcggacac 237 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 517 tctccaaggcgctttacaccttcgacatcgg 547 ||||| |||| |||||||||||||||||||| Sbjct: 600 tctcccaggcactttacaccttcgacatcgg 630
>gb|AY107095.1| Zea mays PCO131316 mRNA sequence Length = 1042 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 395 cagccccatttccttggacgtgcagatctggcaattccagcagttcatcaacaggagccg 454 ||||||||||||||||||||||||| ||||| | || | || ||||||||||| |||| Sbjct: 494 cagccccatttccttggacgtgcagttctgggagtttgaacaattcatcaacagaagcca 553 Query: 455 cttcgtctacaacaacataggtggaatctac 485 ||||||||||||||| ||| || |||||| Sbjct: 554 actcgtctacaacaacaaaggcggtatctac 584 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Plus Query: 185 gccgccctacggccagaccttcttcggcatgccagccgggaggcagagcgacggccgcct 244 ||||||| ||||| |||||||||||||||||| ||||| | | |||| || ||||| Sbjct: 284 gccgcccaacggcaggaccttcttcggcatgcccgccggccgctactgcgatggtcgcct 343 Query: 245 caccatcgacttcatggctcaaagcctggggctgcgttacctgaatgcgtatctggattc 304 | |||||||||||| ||| |||||||||| ||| | |||| | |||||| ||| | || Sbjct: 344 cgtcatcgacttcatcgctgaaagcctgggactgactcacctcagtgcgtacctgaactc 403 Query: 305 gctagggagcaacttcacgcagggagccaa 334 | | || ||||||||||| ||||||||||| Sbjct: 404 gattggaagcaacttcacacagggagccaa 433 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 109 acttcccggcgatcttcaacttcggcgactcctactcggacac 151 |||||||||| | |||||||||||||||||| |||||||||| Sbjct: 208 acttcccggccgtgttcaacttcggcgactccaactcggacac 250 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 517 tctccaaggcgctttacaccttcgacatcgg 547 ||||| |||| |||||||||||||||||||| Sbjct: 613 tctcccaggcactttacaccttcgacatcgg 643
>ref|NM_183855.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 119 gatcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| ||||||||||||| Sbjct: 300 gatcttcaacttcggcgactccaactcggacaccgg 335
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 119 gatcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| ||||||||||||| Sbjct: 12717520 gatcttcaacttcggcgactccaactcggacaccgg 12717555 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 232 gcgacggccgcctcaccatcgacttc 257 |||||||||||||||||||||||||| Sbjct: 12725309 gcgacggccgcctcaccatcgacttc 12725334 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 |||||||||||||||||||||||| Sbjct: 24309145 ccctacggccagaccttcttcggc 24309168 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 233 cgacggccgcctcaccatcgacttcat 259 |||||||||||||| |||||||||||| Sbjct: 26196768 cgacggccgcctcatcatcgacttcat 26196794 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 120 atcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| | | |||||||| Sbjct: 6764756 atcttcaacttcggcgactccttcgccgacaccgg 6764722 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 26242957 acggccgcctcatcatcgacttcat 26242981 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 26224252 acggccgcctcatcatcgacttcat 26224276 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 26216198 acggccgcctcatcatcgacttcat 26216222 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 123 ttcaacttcggcgactcctactcggacac 151 ||||||||||| |||||| |||||||||| Sbjct: 12725197 ttcaacttcggggactccaactcggacac 12725225 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 6287657 acggccgcctcatcatcgacttcat 6287681 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 ccgccctacggccagaccttcttc 209 |||||||||||| ||||||||||| Sbjct: 26192041 ccgccctacggcgagaccttcttc 26192064 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 6764666 ccctacggcgagaccttcttcggc 6764643 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 6376465 ccctacggcgagaccttcttcggc 6376488 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 6364252 ccctacggcgagaccttcttcggc 6364275 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 6360730 ccctacggcgagaccttcttcggc 6360753 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 6352838 ccctacggcgagaccttcttcggc 6352861 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 6340101 ccctacggcgagaccttcttcggc 6340124
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 119 gatcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| ||||||||||||| Sbjct: 84549 gatcttcaacttcggcgactccaactcggacaccgg 84584 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 232 gcgacggccgcctcaccatcgacttc 257 |||||||||||||||||||||||||| Sbjct: 92338 gcgacggccgcctcaccatcgacttc 92363 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 123 ttcaacttcggcgactcctactcggacac 151 ||||||||||| |||||| |||||||||| Sbjct: 92226 ttcaacttcggggactccaactcggacac 92254
>dbj|AK120056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O15, full insert sequence Length = 1895 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 119 gatcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| ||||||||||||| Sbjct: 545 gatcttcaacttcggcgactccaactcggacaccgg 580
>dbj|AK105168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-F02, full insert sequence Length = 801 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 119 gatcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| ||||||||||||| Sbjct: 542 gatcttcaacttcggcgactccaactcggacaccgg 577
>ref|NM_185614.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1417 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 111 ttcccggcgatcttcaacttcggcgactcctactcggacaccggagccttcccggccctc 170 |||||||| |||||||||||||||||||| |||| |||||||| | |||| |||| | Sbjct: 135 ttcccggccgtcttcaacttcggcgactccaactccgacaccggcggcttctgggccgcc 194 Query: 171 ttcccggcg 179 ||||||||| Sbjct: 195 ttcccggcg 203
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 111 ttcccggcgatcttcaacttcggcgactcctactcggacaccggagccttcccggccctc 170 |||||||| |||||||||||||||||||| |||| |||||||| | |||| |||| | Sbjct: 3057875 ttcccggccgtcttcaacttcggcgactccaactccgacaccggcggcttctgggccgcc 3057816 Query: 171 ttcccggcg 179 ||||||||| Sbjct: 3057815 ttcccggcg 3057807 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 ccgccctacggccagaccttcttcggc 212 ||||||||||||||||||| ||||||| Sbjct: 19494465 ccgccctacggccagacctacttcggc 19494439 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 2892906 cagcctccctacggcgagaccttcttcggc 2892935
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 111 ttcccggcgatcttcaacttcggcgactcctactcggacaccggagccttcccggccctc 170 |||||||| |||||||||||||||||||| |||| |||||||| | |||| |||| | Sbjct: 12060 ttcccggccgtcttcaacttcggcgactccaactccgacaccggcggcttctgggccgcc 12001 Query: 171 ttcccggcg 179 ||||||||| Sbjct: 12000 ttcccggcg 11992
>dbj|AK073443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044K03, full insert sequence Length = 1417 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 111 ttcccggcgatcttcaacttcggcgactcctactcggacaccggagccttcccggccctc 170 |||||||| |||||||||||||||||||| |||| |||||||| | |||| |||| | Sbjct: 135 ttcccggccgtcttcaacttcggcgactccaactccgacaccggcggcttctgggccgcc 194 Query: 171 ttcccggcg 179 ||||||||| Sbjct: 195 ttcccggcg 203
>ref|NM_183857.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 372 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 232 gcgacggccgcctcaccatcgacttc 257 |||||||||||||||||||||||||| Sbjct: 281 gcgacggccgcctcaccatcgacttc 306 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 123 ttcaacttcggcgactcctactcggacac 151 ||||||||||| |||||| |||||||||| Sbjct: 169 ttcaacttcggggactccaactcggacac 197
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 232 gcgacggccgcctcaccatcgacttc 257 |||||||||||||||||||||||||| Sbjct: 5708 gcgacggccgcctcaccatcgacttc 5733 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 123 ttcaacttcggcgactcctactcggacac 151 ||||||||||| |||||| |||||||||| Sbjct: 5596 ttcaacttcggggactccaactcggacac 5624
>dbj|AK100480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095I15, full insert sequence Length = 2974 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 232 gcgacggccgcctcaccatcgacttc 257 |||||||||||||||||||||||||| Sbjct: 220 gcgacggccgcctcaccatcgacttc 245 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 123 ttcaacttcggcgactcctactcggacac 151 ||||||||||| |||||| |||||||||| Sbjct: 108 ttcaacttcggggactccaactcggacac 136
>ref|NM_113549.3| Arabidopsis thaliana ARRZ-1A; RNA binding / nucleotide binding AT3G26420 (ARRZ-1A) mRNA, complete cds Length = 3033 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 111 ttcccggcgatcttcaacttcggcgactc 139 ||||||||||| ||||||||||||||||| Sbjct: 2069 ttcccggcgatattcaacttcggcgactc 2097
>ref|NM_113550.3| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds AT3G26430 mRNA, complete cds Length = 3162 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 111 ttcccggcgatcttcaacttcggcgactc 139 ||||||||||| ||||||||||||||||| Sbjct: 2066 ttcccggcgatattcaacttcggcgactc 2094
>gb|AY093315.1| Arabidopsis thaliana unknown protein (F20C19.15:F20C19.16) mRNA, complete cds Length = 1181 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 111 ttcccggcgatcttcaacttcggcgactc 139 ||||||||||| ||||||||||||||||| Sbjct: 85 ttcccggcgatattcaacttcggcgactc 113
>gb|AY062535.1| Arabidopsis thaliana Unknown protein (F20C19.15:F20C19.16) mRNA, complete cds Length = 3240 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 111 ttcccggcgatcttcaacttcggcgactc 139 ||||||||||| ||||||||||||||||| Sbjct: 2066 ttcccggcgatattcaacttcggcgactc 2094
>emb|BX824162.1|CNS0A5RL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1284 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 111 ttcccggcgatcttcaacttcggcgactc 139 ||||||||||| ||||||||||||||||| Sbjct: 197 ttcccggcgatattcaacttcggcgactc 225
>dbj|AP001298.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F20C19 Length = 71184 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 111 ttcccggcgatcttcaacttcggcgactc 139 ||||||||||| ||||||||||||||||| Sbjct: 38281 ttcccggcgatattcaacttcggcgactc 38309
>ref|XM_475626.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 504 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 358 ttcaacttcggcgactccaactccgacaccgg 389
>ref|XM_475624.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 304 ttcaacttcggcgactccaactccgacaccgg 335
>ref|NM_192764.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 |||||||||||||||||||||||| Sbjct: 334 ccctacggccagaccttcttcggc 357
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 76137 ttcaacttcggcgactccaactccgacaccgg 76106 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 65452 ttcaacttcggcgactccaactccgacaccgg 65421
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 12286 ttcaacttcggcgactccaactccgacaccgg 12255 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 1601 ttcaacttcggcgactccaactccgacaccgg 1570
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 113 cccggcgatcttcaacttcggcgactcctactcggacaccggag 156 ||||||| | |||||||||||||||||| |||| ||||| |||| Sbjct: 62385 cccggcggtgttcaacttcggcgactccaactccgacacgggag 62428 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 232 gcgacggccgcctcaccatcgacttc 257 ||||||||||||||| |||||||||| Sbjct: 62507 gcgacggccgcctcatcatcgacttc 62532
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 13937 ttcaacttcggcgactccaactccgacaccgg 13906 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 3252 ttcaacttcggcgactccaactccgacaccgg 3221
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 113 cccggcgatcttcaacttcggcgactcctactcggacaccggag 156 ||||||| | |||||||||||||||||| |||| ||||| |||| Sbjct: 19359036 cccggcggtgttcaacttcggcgactccaactccgacacgggag 19359079 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 3446655 ttcaacttcggcgactccaactccgacaccgg 3446624 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 3435970 ttcaacttcggcgactccaactccgacaccgg 3435939 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 233 cgacggccgcctcaccatcgacttcat 259 ||||||||||||| ||||||||||||| Sbjct: 6754098 cgacggccgcctccccatcgacttcat 6754124 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 tcttcaacttcggcgactcctactcggacac 151 |||||||||||||||||||| |||| ||||| Sbjct: 1871670 tcttcaacttcggcgactccaactccgacac 1871700 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 232 gcgacggccgcctcaccatcgacttc 257 ||||||||||||||| |||||||||| Sbjct: 19359158 gcgacggccgcctcatcatcgacttc 19359183 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 6702987 cagcccccctacggcaagaccttcttcggc 6703016
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 |||||||||||||||||||||||| Sbjct: 133709 ccctacggccagaccttcttcggc 133732
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 |||||||||||||||||||||||| Sbjct: 55049 ccctacggccagaccttcttcggc 55072
>dbj|AK067837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E10, full insert sequence Length = 1740 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 123 ttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||| |||| |||||||| Sbjct: 396 ttcaacttcggcgactccaactccgacaccgg 427
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence Length = 1313 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 182 gcagccgccctacggccagaccttcttcggca 213 |||||||||||||||| |||||| |||||||| Sbjct: 271 gcagccgccctacggcgagacctacttcggca 302 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 atcttcaacttcggcgactcc 140 ||||||||||||||||||||| Sbjct: 194 atcttcaacttcggcgactcc 214
>ref|NM_188525.1| Oryza sativa (japonica cultivar-group), Ozsa8194 predicted mRNA Length = 891 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 120 atcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| | | |||||||| Sbjct: 133 atcttcaacttcggcgactccttcgccgacaccgg 167 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 223 ccctacggcgagaccttcttcggc 246
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 233 cgacggccgcctcaccatcgacttcat 259 ||||||||||||| ||||||||||||| Sbjct: 231 cgacggccgcctccccatcgacttcat 257
>gb|AY566266.1| Avena sativa lipase 1 mRNA, complete cds Length = 1410 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 233 cgacggccgcctcaccatcgacttcat 259 |||||||||||||| |||||||||||| Sbjct: 237 cgacggccgcctcatcatcgacttcat 263
>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077L08, complete sequence Length = 115640 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 121 tcttcaacttcggcgactcctactcggacac 151 |||||||||||||||||||| |||| ||||| Sbjct: 50444 tcttcaacttcggcgactccaactccgacac 50474
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 233 cgacggccgcctcaccatcgacttcat 259 ||||||||||||| ||||||||||||| Sbjct: 58359 cgacggccgcctccccatcgacttcat 58385 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 7248 cagcccccctacggcaagaccttcttcggc 7277
>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 233 cgacggccgcctcaccatcgacttcat 259 |||||||||||||| |||||||||||| Sbjct: 102185 cgacggccgcctcatcatcgacttcat 102211 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 ccgccctacggccagaccttcttc 209 |||||||||||| ||||||||||| Sbjct: 97458 ccgccctacggcgagaccttcttc 97481
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 120 atcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| | | |||||||| Sbjct: 116908 atcttcaacttcggcgactccttcgccgacaccgg 116874 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 116818 ccctacggcgagaccttcttcggc 116795
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 120 atcttcaacttcggcgactcctactcggacaccgg 154 |||||||||||||||||||||| | | |||||||| Sbjct: 46817 atcttcaacttcggcgactccttcgccgacaccgg 46783 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 46727 ccctacggcgagaccttcttcggc 46704
>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1159_D09 Length = 147770 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 233 cgacggccgcctcaccatcgacttcat 259 |||||||||||||| |||||||||||| Sbjct: 8999 cgacggccgcctcatcatcgacttcat 9025 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 55638 acggccgcctcatcatcgacttcat 55662 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 36933 acggccgcctcatcatcgacttcat 36957 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 28879 acggccgcctcatcatcgacttcat 28903 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 ccgccctacggccagaccttcttc 209 |||||||||||| ||||||||||| Sbjct: 4272 ccgccctacggcgagaccttcttc 4295
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 186 ccgccctacggccagaccttcttcggc 212 ||||||||||||||||||| ||||||| Sbjct: 112874 ccgccctacggccagacctacttcggc 112848
>dbj|AK059898.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F09, full insert sequence Length = 1432 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 186 ccgccctacggccagaccttcttcggc 212 ||||||||||||||||||| ||||||| Sbjct: 235 ccgccctacggccagacctacttcggc 261
>dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047B08 Length = 57846 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 233 cgacggccgcctcaccatcgacttcat 259 |||||||||||||| |||||||||||| Sbjct: 37898 cgacggccgcctcatcatcgacttcat 37924 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 57778 acggccgcctcatcatcgacttcat 57802 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 ccgccctacggccagaccttcttc 209 |||||||||||| ||||||||||| Sbjct: 33171 ccgccctacggcgagaccttcttc 33194
>ref|XM_476136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 160 cagcccccctacggcaagaccttcttcggc 189
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 74149 cagcccccctacggcaagaccttcttcggc 74178
>gb|AY580163.1| Oryza sativa (japonica cultivar-group) putative lipase mRNA, complete cds Length = 1413 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 222 cagcccccctacggcaagaccttcttcggc 251
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA sequence Length = 1634 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 182 gcagccgccctacggccagaccttcttcgg 211 |||||||||||||||| |||||| |||||| Sbjct: 321 gcagccgccctacggcgagacctacttcgg 350
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 136387 cagcctccctacggcgagaccttcttcggc 136416
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 53052 cagcctccctacggcgagaccttcttcggc 53081
>dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M11, full insert sequence Length = 1430 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 222 cagcctccctacggcgagaccttcttcggc 251
>dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H08, full insert sequence Length = 1429 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 221 cagcctccctacggcgagaccttcttcggc 250
>dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C04, full insert sequence Length = 1417 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 219 cagcctccctacggcgagaccttcttcggc 248
>dbj|AK100289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I03, full insert sequence Length = 1410 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 226 cagcccccctacggcaagaccttcttcggc 255
>dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D03, full insert sequence Length = 1450 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 219 cagcctccctacggcgagaccttcttcggc 248
>dbj|AK059511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B05, full insert sequence Length = 1422 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttcttcggc 212 ||||| ||||||||| |||||||||||||| Sbjct: 237 cagcccccctacggcaagaccttcttcggc 266
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence Length = 1460 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 cagccgccctacggccagaccttctt 208 ||||||||||||||| |||||||||| Sbjct: 227 cagccgccctacggcgagaccttctt 252
>ref|NM_111391.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting on ester bonds AT3G05180 mRNA, complete cds Length = 1356 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 108 gacttcccggcgatcttcaacttcggcgactcctactcggacaccggag 156 ||||| |||||| | ||||||||||| ||||| |||| |||||||||| Sbjct: 112 gactttccggcggttttcaacttcggagactctaactctgacaccggag 160
>ref|NM_188439.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 230 acggccgcctcatcatcgacttcat 254
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 545 cggcgccaacgacctcgccatgggc 569 ||||||||||||||||| ||||||| Sbjct: 2413440 cggcgccaacgacctcggcatgggc 2413464
>ref|NM_192358.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1203 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 245 acggccgcctcatcatcgacttcat 269
>ref|NM_192360.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1269 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 260 acggccgcctcatcatcgacttcat 284
>ref|NM_192363.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 561 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 260 acggccgcctcatcatcgacttcat 284
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 108 gacttcccggcgatcttcaacttcggcgactcctactcggacaccggag 156 ||||| |||||| | ||||||||||| ||||| |||| |||||||||| Sbjct: 66434 gactttccggcggttttcaacttcggagactctaactctgacaccggag 66386
>gb|BT000788.1| Arabidopsis thaliana clone RAFL05-19-G22 (R10368) putative nodulin (At3g05180) mRNA, partial cds Length = 1186 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 108 gacttcccggcgatcttcaacttcggcgactcctactcggacaccggag 156 ||||| |||||| | ||||||||||| ||||| |||| |||||||||| Sbjct: 25 gactttccggcggttttcaacttcggagactctaactctgacaccggag 73
>gb|AY056157.1| Arabidopsis thaliana putative nodulin protein (At3g05180) mRNA, complete cds Length = 1313 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 108 gacttcccggcgatcttcaacttcggcgactcctactcggacaccggag 156 ||||| |||||| | ||||||||||| ||||| |||| |||||||||| Sbjct: 112 gactttccggcggttttcaacttcggagactctaactctgacaccggag 160
>emb|BX822265.1|CNS0A756 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1371 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 108 gacttcccggcgatcttcaacttcggcgactcctactcggacaccggag 156 ||||| |||||| | ||||||||||| ||||| |||| |||||||||| Sbjct: 93 gactttccggcggttttcaacttcggagactctaactctgacaccggag 141
>gb|AY085661.1| Arabidopsis thaliana clone 16718 mRNA, complete sequence Length = 1350 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 108 gacttcccggcgatcttcaacttcggcgactcctactcggacaccggag 156 ||||| |||||| | ||||||||||| ||||| |||| |||||||||| Sbjct: 107 gactttccggcggttttcaacttcggagactctaactctgacaccggag 155
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 149855 acggccgcctcatcatcgacttcat 149879
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 58723 acggccgcctcatcatcgacttcat 58747 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 147531 ccctacggcgagaccttcttcggc 147554 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 135318 ccctacggcgagaccttcttcggc 135341 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 131796 ccctacggcgagaccttcttcggc 131819 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 123904 ccctacggcgagaccttcttcggc 123927 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 111167 ccctacggcgagaccttcttcggc 111190
>dbj|AK102591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F21, full insert sequence Length = 2163 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 285 acggccgcctcatcatcgacttcat 309
>dbj|AK100754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118N06, full insert sequence Length = 1294 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 294 acggccgcctcatcatcgacttcat 318
>dbj|AK072891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147C03, full insert sequence Length = 3569 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 258 acggccgcctcatcatcgacttcat 282
>dbj|AK068077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135A09, full insert sequence Length = 1424 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 325 acggccgcctcatcatcgacttcat 349
>dbj|AK064049.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-E02, full insert sequence Length = 1453 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 314 acggccgcctcatcatcgacttcat 338
>dbj|AK062640.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-D07, full insert sequence Length = 747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 255 acggccgcctcatcatcgacttcat 279
>dbj|AK062412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F03, full insert sequence Length = 957 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 acggccgcctcaccatcgacttcat 259 |||||||||||| |||||||||||| Sbjct: 314 acggccgcctcatcatcgacttcat 338
>ref|NM_019009.2| Homo sapiens toll interacting protein (TOLLIP), mRNA Length = 3615 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 98 gccgccgcagcaccatggcgacca 121
>gb|AY819766.1| Caenorhabditis elegans kettin (F54E2.3) mRNA, complete cds Length = 13569 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcgatcttcaacttcggcga 136 |||||||||||||||||||| Sbjct: 3238 gcgatcttcaacttcggcga 3219
>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA Length = 1110 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 205 ccctacggcgagaccttcttcggc 228
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA Length = 1137 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 190 ccctacggcgagaccttcttcggc 213
>ref|NM_188455.1| Oryza sativa (japonica cultivar-group), Ozsa8150 predicted mRNA Length = 1149 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 205 ccctacggcgagaccttcttcggc 228
>ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa8149 predicted mRNA Length = 1137 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 181 ccctacggcgagaccttcttcggc 204
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA Length = 1194 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 196 ccctacggcgagaccttcttcggc 219
>ref|XM_466655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1212 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 115 cggcgatcttcaacttcggcgactcctactcggacaccgg 154 |||| |||| ||||||||| |||||| |||||||||||| Sbjct: 128 cggccatctacaacttcggggactccatctcggacaccgg 167
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 cggcgccaacgacctcgcca 564 |||||||||||||||||||| Sbjct: 177044 cggcgccaacgacctcgcca 177063
>gb|BC012057.1| Homo sapiens toll interacting protein, mRNA (cDNA clone MGC:19882 IMAGE:4647828), complete cds Length = 1346 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 76 gccgccgcagcaccatggcgacca 99
>gb|BC004420.1| Homo sapiens toll interacting protein, mRNA (cDNA clone MGC:1194 IMAGE:3356339), complete cds Length = 1394 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 111 gccgccgcagcaccatggcgacca 134
>gb|AC147563.4| Mus musculus BAC clone RP23-231H21 from chromosome 10, complete sequence Length = 236428 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tccagcagttcatcaacagg 449 |||||||||||||||||||| Sbjct: 68267 tccagcagttcatcaacagg 68286
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 14132974 ccctacggcgagaccttcttcggc 14132997 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 14128026 ccctacggcgagaccttcttcggc 14128049 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 14114901 ccctacggcgagaccttcttcggc 14114924
>gb|AC122810.4| Mus musculus BAC clone RP23-276H4 from chromosome 10, complete sequence Length = 177681 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tccagcagttcatcaacagg 449 |||||||||||||||||||| Sbjct: 54098 tccagcagttcatcaacagg 54117
>gb|AF106579.3| Caenorhabditis elegans cosmid F54E2, complete sequence Length = 37005 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gcgatcttcaacttcggcga 136 |||||||||||||||||||| Sbjct: 14051 gcgatcttcaacttcggcga 14070
>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0022F22, from chromosome 3, complete sequence Length = 144268 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 142653 ccctacggcgagaccttcttcggc 142676 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 137705 ccctacggcgagaccttcttcggc 137728 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 124580 ccctacggcgagaccttcttcggc 124603
>ref|NM_023764.2| Mus musculus toll interacting protein (Tollip), mRNA Length = 3706 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 86 gccgccgcagcaccatggcgacca 109
>emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chromosome 1 Contains a novel gene and part of a novel gene, complete sequence Length = 145630 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 caccaccatggcgaccagcaaact 46 ||||||||||| |||||||||||| Sbjct: 74821 caccaccatggagaccagcaaact 74798
>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7 Length = 344615 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 ggcaattccagcagttcatc 443 |||||||||||||||||||| Sbjct: 264677 ggcaattccagcagttcatc 264696
>gb|AC136297.6| Homo sapiens chromosome 11, clone CTD-2245O6, complete sequence Length = 185908 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 142131 gccgccgcagcaccatggcgacca 142154
>gb|BC062139.1| Mus musculus toll interacting protein, mRNA (cDNA clone MGC:69995 IMAGE:6334946), complete cds Length = 3726 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 66 gccgccgcagcaccatggcgacca 89
>emb|AL136835.1|HSM801803 Homo sapiens mRNA; cDNA DKFZp434D152 (from clone DKFZp434D152) Length = 3615 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 98 gccgccgcagcaccatggcgacca 121
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 7265 ccctacggcgagaccttcttcggc 7288 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 2317 ccctacggcgagaccttcttcggc 2340
>dbj|AK096693.1| Homo sapiens cDNA FLJ39374 fis, clone PEBLM2008576, highly similar to Homo sapiens mRNA for TOLLIP protein Length = 3430 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 108 gccgccgcagcaccatggcgacca 131
>dbj|AK090850.1| Homo sapiens cDNA FLJ33531 fis, clone BRAMY2007255, highly similar to Homo sapiens mRNA for TOLLIP protein Length = 2183 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 112 gccgccgcagcaccatggcgacca 135
>dbj|AK022871.1| Homo sapiens cDNA FLJ12809 fis, clone NT2RP2002408, highly similar to Homo sapiens mRNA for TOLLIP protein Length = 2282 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 143 gccgccgcagcaccatggcgacca 166
>dbj|AK161312.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922505P14 product:toll interacting protein, full insert sequence Length = 3692 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 72 gccgccgcagcaccatggcgacca 95
>dbj|AK078391.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:6530441F20 product:toll interacting protein, full insert sequence Length = 1101 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 95 gccgccgcagcaccatggcgacca 118
>dbj|AK016482.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931428G15 product:toll interacting protein, full insert sequence Length = 3706 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 86 gccgccgcagcaccatggcgacca 109
>dbj|AK049394.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430003I18 product:toll interacting protein, full insert sequence Length = 2197 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 31 gccgccgcagcaccatggcgacca 54
>dbj|AK049263.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330017P21 product:toll interacting protein, full insert sequence Length = 1918 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 107 gccgccgcagcaccatggcgacca 130
>dbj|AK045422.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230117F21 product:toll interacting protein, full insert sequence Length = 2486 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 69 gccgccgcagcaccatggcgacca 92
>ref|NM_001028799.1| Caenorhabditis elegans KETtiN (Drosophila actin-binding) homolog family member (ketn-1) (ketn-1) mRNA, complete cds Length = 13344 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcgatcttcaacttcggcga 136 |||||||||||||||||||| Sbjct: 3165 gcgatcttcaacttcggcga 3146
>ref|NM_001028798.1| Caenorhabditis elegans KETtiN (Drosophila actin-binding) homolog family member (ketn-1) (ketn-1) mRNA, complete cds Length = 13456 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcgatcttcaacttcggcga 136 |||||||||||||||||||| Sbjct: 2202 gcgatcttcaacttcggcga 2183
>ref|NM_001028800.1| Caenorhabditis elegans KETtiN (Drosophila actin-binding) homolog family member (ketn-1) (ketn-1) mRNA, complete cds Length = 13704 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcgatcttcaacttcggcga 136 |||||||||||||||||||| Sbjct: 3165 gcgatcttcaacttcggcga 3146
>ref|NM_071357.5| Caenorhabditis elegans KETtiN (Drosophila actin-binding) homolog family member (ketn-1) (ketn-1) mRNA, complete cds Length = 15305 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcgatcttcaacttcggcga 136 |||||||||||||||||||| Sbjct: 4368 gcgatcttcaacttcggcga 4349
>ref|XM_392295.2| PREDICTED: Apis mellifera similar to GA14843-PA (LOC408761), mRNA Length = 3501 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tcgtcgtgttgctggtggta 74 |||||||||||||||||||| Sbjct: 25 tcgtcgtgttgctggtggta 6
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 14127949 ccctacggcgagaccttcttcggc 14127972 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 14123001 ccctacggcgagaccttcttcggc 14123024 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 14109876 ccctacggcgagaccttcttcggc 14109899
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 115 cggcgatcttcaacttcggcgactcctactcggacaccgg 154 |||| |||| ||||||||| |||||| |||||||||||| Sbjct: 23913735 cggccatctacaacttcggggactccatctcggacaccgg 23913696
>gb|AC074051.4| Homo sapiens chromosome 16 clone RP11-382N13, complete sequence Length = 218133 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggctcaaagcctggggctgc 279 |||||||||||||||||||| Sbjct: 41938 ggctcaaagcctggggctgc 41957
>gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188928 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ttccagcagttcatcaacag 448 |||||||||||||||||||| Sbjct: 26827 ttccagcagttcatcaacag 26808
>ref|XM_345633.2| PREDICTED: Rattus norvegicus mutS homolog 6 (E. coli) (predicted) (Msh6_predicted), mRNA Length = 4194 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 gcccaaaccagatcacctgg 516 |||||||||||||||||||| Sbjct: 503 gcccaaaccagatcacctgg 484
>ref|XM_341961.2| PREDICTED: Rattus norvegicus toll interacting protein (predicted) (Tollip_predicted), mRNA Length = 1973 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 180 gccgccgcagcaccatggcgacca 203
>gb|U42720.2|SIU42720 Simian immunodeficiency virus Gag protein (gag) gene, complete cds; Pol protein (pol) gene, partial cds; and Vif protein (vif), Vpr protein (vpr), Tat protein (tat), Rev protein (rev), Vpu protein (vpu), Env protein (env), and Nef protein (nef) genes, complete cds Length = 9068 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 cgatcttgcccaaaccagat 509 |||||||||||||||||||| Sbjct: 270 cgatcttgcccaaaccagat 251
>gb|AC061979.17| Homo sapiens chromosome 11, clone RP11-532E4, complete sequence Length = 124104 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 97356 gccgccgcagcaccatggcgacca 97333
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 115 cggcgatcttcaacttcggcgactcctactcggacaccgg 154 |||| |||| ||||||||| |||||| |||||||||||| Sbjct: 135401 cggccatctacaacttcggggactccatctcggacaccgg 135362
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 115 cggcgatcttcaacttcggcgactcctactcggacaccgg 154 |||| |||| ||||||||| |||||| |||||||||||| Sbjct: 47699 cggccatctacaacttcggggactccatctcggacaccgg 47660
>dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B05, full insert sequence Length = 1723 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 410 ccctacggcgagaccttcttcggc 433
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full insert sequence Length = 1526 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 266 ccctacggcgagaccttcttcggc 289
>dbj|AK063672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-D08, full insert sequence Length = 1358 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 248 ccctacggcgagaccttcttcggc 271
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full insert sequence Length = 1531 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccctacggccagaccttcttcggc 212 ||||||||| |||||||||||||| Sbjct: 266 ccctacggcgagaccttcttcggc 289
>gb|AY104591.1| Zea mays PCO098873 mRNA sequence Length = 1094 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 120 atcttcaacttcggcgactcctactcggacac 151 ||||||| |||||||||||||| ||| ||||| Sbjct: 246 atcttcagcttcggcgactccttctccgacac 277
>gb|AY104407.1| Zea mays PCO114073 mRNA sequence Length = 1726 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 gccctacggccagaccttcttcgg 211 ||||||||||||||||| |||||| Sbjct: 440 gccctacggccagacctacttcgg 463
>gb|AC006677.1| Caenorhabditis elegans cosmid R05D8, complete sequence Length = 50164 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gcgatcttcaacttcggcga 136 |||||||||||||||||||| Sbjct: 45115 gcgatcttcaacttcggcga 45134
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 tcggcgccaacgacctcgcc 563 |||||||||||||||||||| Sbjct: 1982304 tcggcgccaacgacctcgcc 1982323
>gb|BC053515.1| Mus musculus cDNA clone IMAGE:6307951, containing frame-shift errors Length = 3712 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 68 gccgccgcagcaccatggcgacca 91
>gb|BC018272.1| Homo sapiens toll interacting protein, mRNA (cDNA clone MGC:16867 IMAGE:3452585), complete cds Length = 1357 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 68 gccgccgcagcaccatggcgacca 91
>dbj|AB209541.1| Homo sapiens mRNA for toll interacting protein variant protein Length = 3361 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 92 gccgccgcagcaccatggcgacca 115
>emb|AL772165.15| Mouse DNA sequence from clone RP23-118G3 on chromosome 7, complete sequence Length = 135330 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 73415 gccgccgcagcaccatggcgacca 73392
>emb|AL772378.8| Mouse DNA sequence from clone RP23-106C4 on chromosome X, complete sequence Length = 109193 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tccagcagttcatcaacagg 449 |||||||||||||||||||| Sbjct: 39231 tccagcagttcatcaacagg 39212
>emb|AJ242971.1|MMU242971 Mus musculus mRNA for TOLLIP protein Length = 1247 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccgccgcaccaccatggcgacca 39 ||||||||| |||||||||||||| Sbjct: 89 gccgccgcagcaccatggcgacca 112
>emb|AJ421480.1| Mus musculus X-inactivation center region; segment 3/3 Length = 214384 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tccagcagttcatcaacagg 449 |||||||||||||||||||| Sbjct: 110538 tccagcagttcatcaacagg 110557
>dbj|AB026846.2| Caenorhabditis elegans mRNA for kettin, complete cds Length = 12660 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcgatcttcaacttcggcga 136 |||||||||||||||||||| Sbjct: 2202 gcgatcttcaacttcggcga 2183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,724,114 Number of Sequences: 3902068 Number of extensions: 3724114 Number of successful extensions: 75491 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74573 Number of HSP's gapped (non-prelim): 901 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
