ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart25h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483854.1| Oryza sativa (japonica cultivar-group), mRNA 188 1e-44
2dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
3gb|AY103941.1| Zea mays PCO095480 mRNA sequence 94 6e-16
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
5dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
6gb|BT014170.1| Lycopersicon esculentum clone 133309F, mRNA sequence 42 1.9
7gb|AC084163.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 1.9
8emb|CR376837.5| Zebrafish DNA sequence from clone CH211-165B17 i... 42 1.9
9emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 42 1.9
10emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in l... 42 1.9
11gb|AY112201.1| Zea mays CL4163_1 mRNA sequence 42 1.9
12gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.9
13gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, co... 40 7.4
14ref|XM_483755.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.4
15gb|BT019291.1| Zea mays clone Contig964.F mRNA sequence 40 7.4
16gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, comp... 40 7.4
17gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 7.4
18ref|XM_367879.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 7.4
19gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 7.4
20gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 7.4
21gb|AY359575.1| Zea mays W64A acc oxidase (ACO20) mRNA, complete cds 40 7.4
22gb|AY359574.1| Zea mays B73 acc oxidase (ACO20) gene, partial cds 40 7.4
23gb|AF211176.2| Botryotinia fuckeliana cystathionine beta-lyase (... 40 7.4
24ref|XM_445693.1| Candida glabrata CBS138, CAGL0D06622g partial mRNA 40 7.4
25gb|CP000001.1| Bacillus cereus E33L, complete genome 40 7.4
26gb|AC107980.8| Homo sapiens chromosome 15, clone CTD-3118D7, com... 40 7.4
27emb|CR380950.1| Candida glabrata strain CBS138 chromosome D comp... 40 7.4
28gb|AY233907.1| Ceratocystis polonica strain CMW5026 internal tra... 40 7.4
29gb|AY233906.1| Ceratocystis polonica strain CMW1165 internal tra... 40 7.4
30gb|AY233905.1| Ceratocystis polonica strain CMW7149 internal tra... 40 7.4
31gb|AY233904.1| Ceratocystis polonica strain CMW7143 internal tra... 40 7.4
32gb|AY233903.1| Ceratocystis polonica strain CMW7133 internal tra... 40 7.4
33gb|AY233902.1| Ceratocystis polonica strain CMW7152 internal tra... 40 7.4
34gb|AY233901.1| Ceratocystis polonica strain CMW1164 internal tra... 40 7.4
35gb|AY233900.1| Ceratocystis polonica strain CMW7754 internal tra... 40 7.4
36gb|AY233899.1| Ceratocystis polonica strain CMW7748 internal tra... 40 7.4
37gb|AY233898.1| Ceratocystis polonica strain CMW10522 internal tr... 40 7.4
38gb|AY233897.1| Ceratocystis polonica strain CMW2210 internal tra... 40 7.4
39gb|AY233896.1| Ceratocystis polonica strain CMW7151 internal tra... 40 7.4
40gb|AY233895.1| Ceratocystis polonica strain CMW2286 internal tra... 40 7.4
41gb|AY233894.1| Ceratocystis polonica strain CMW2284 internal tra... 40 7.4
42gb|AY233893.1| Ceratocystis polonica strain CMW2272 internal tra... 40 7.4
43gb|AY233892.1| Ceratocystis polonica strain CMW7138 internal tra... 40 7.4
44gb|AY233891.1| Ceratocystis polonica strain CMW8874 internal tra... 40 7.4
45gb|AY233890.1| Ceratocystis polonica strain CMW8845 internal tra... 40 7.4
46gb|AY233889.1| Ceratocystis polonica strain CMW8830 internal tra... 40 7.4
47gb|AY233888.1| Ceratocystis polonica strain CMW8873 internal tra... 40 7.4
48emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chr... 40 7.4
49emb|BX470109.3| Mouse DNA sequence from clone RP23-59I3 on chrom... 40 7.4
50emb|BX323006.12| Zebrafish DNA sequence from clone CH211-145H19 ... 40 7.4
51emb|CR858889.1| Pongo pygmaeus mRNA; cDNA DKFZp459N191 (from clo... 40 7.4
52dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 7.4
53gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 7.4
54emb|BX470247.5| Zebrafish DNA sequence from clone DKEY-96N2 in l... 40 7.4
55ref|XM_685844.1| PREDICTED: Danio rerio similar to p130Cas-assoc... 40 7.4
56emb|AL111267.1|CNS0196Z Botrytis cinerea strain T4 cDNA library 40 7.4
57dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
58dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
59dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
60dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.4
61dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
62dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
63dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
64emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, ... 40 7.4
65dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
66dbj|AK061522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
67gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 7.4
68gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
69emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.4
70gb|AC131699.4| Mus musculus BAC clone RP23-440F17 from 1, comple... 40 7.4
71gb|AC167197.6| Mus musculus chromosome 1, clone RP23-62B14, comp... 40 7.4 
>ref|XM_483854.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1538

 Score =  188 bits (95), Expect = 1e-44
 Identities = 271/329 (82%), Gaps = 3/329 (0%)
 Strand = Plus / Plus

                                                                       
Query: 131 gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaagac---gaccag 187
           ||||||||| |||| | |||||||| |||||||||||||||||||||| ||   ||||||
Sbjct: 309 gccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaacaccacgaccag 368

                                                                       
Query: 188 gccatgtcgatgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgca 247
           |||   || |||||||| ||  |||||||||| |||||||||||||||||||||||||||
Sbjct: 369 gccgcttcaatgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgca 428

                                                                       
Query: 248 ccacctgccatgcttcctgcaccttcttctgcaaagttaaacgagttgctactgccaaaa 307
           |||||  ||  ||| |||||||  |||||| |||||||| || || || |||| || || 
Sbjct: 429 ccaccaccctcgctacctgcacaatcttcttcaaagttagacaagctgttactccctaac 488

                                                                       
Query: 308 ccatttgacaggcctcgtgctgttttcttgatgcaaattgatggatcccatgactctgtc 367
           ||||||||||| || || |||||||||||| ||||||| ||||||| ||||| ||| || 
Sbjct: 489 ccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatgcctccgtt 548

                                                                       
Query: 368 gatagcttcgtatctgatgccggtagtatttacaaaaccaagattgatggtgcaaaaagt 427
           || ||| ||  |||||| || ||||| || | ||||||||  |||||||||  ||    |
Sbjct: 549 gaaagcatcacatctgaagctggtagcatcttcaaaaccactattgatggtctaagcgat 608

                                        
Query: 428 gctgctacagggcttacagataaggatga 456
            ||||||||||||||||||||||||||||
Sbjct: 609 tctgctacagggcttacagataaggatga 637
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>dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D24, full
           insert sequence
          Length = 1538

 Score =  188 bits (95), Expect = 1e-44
 Identities = 271/329 (82%), Gaps = 3/329 (0%)
 Strand = Plus / Plus

                                                                       
Query: 131 gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaagac---gaccag 187
           ||||||||| |||| | |||||||| |||||||||||||||||||||| ||   ||||||
Sbjct: 309 gccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaacaccacgaccag 368

                                                                       
Query: 188 gccatgtcgatgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgca 247
           |||   || |||||||| ||  |||||||||| |||||||||||||||||||||||||||
Sbjct: 369 gccgcttcaatgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgca 428

                                                                       
Query: 248 ccacctgccatgcttcctgcaccttcttctgcaaagttaaacgagttgctactgccaaaa 307
           |||||  ||  ||| |||||||  |||||| |||||||| || || || |||| || || 
Sbjct: 429 ccaccaccctcgctacctgcacaatcttcttcaaagttagacaagctgttactccctaac 488

                                                                       
Query: 308 ccatttgacaggcctcgtgctgttttcttgatgcaaattgatggatcccatgactctgtc 367
           ||||||||||| || || |||||||||||| ||||||| ||||||| ||||| ||| || 
Sbjct: 489 ccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatgcctccgtt 548

                                                                       
Query: 368 gatagcttcgtatctgatgccggtagtatttacaaaaccaagattgatggtgcaaaaagt 427
           || ||| ||  |||||| || ||||| || | ||||||||  |||||||||  ||    |
Sbjct: 549 gaaagcatcacatctgaagctggtagcatcttcaaaaccactattgatggtctaagcgat 608

                                        
Query: 428 gctgctacagggcttacagataaggatga 456
            ||||||||||||||||||||||||||||
Sbjct: 609 tctgctacagggcttacagataaggatga 637
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>gb|AY103941.1| Zea mays PCO095480 mRNA sequence
          Length = 1596

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                       
Query: 370 tagcttcgtatctgatgccggtagtatttacaaaaccaagattgatggtgcaaaaagtgc 429
           ||||||||||||||| | | | |  |||| ||| |||| |||||| |||||||| |  ||
Sbjct: 461 tagcttcgtatctgaaggcagcaacattttcaagaccaggattgaaggtgcaaacatcgc 520

                                                                  
Query: 430 tgctacagggcttacagataaggatgaattgattgtcattcgttcagatgaatct 484
           || |||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct: 521 tgatacagggcttacagataaggatgacttaattgtcattcattcagatgaatct 575



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 100/122 (81%), Gaps = 3/122 (2%)
 Strand = Plus / Plus

                                                                       
Query: 131 gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaagacgac---cag 187
           |||| ||||||||| | | |||||||||||||||| ||||| ||||||| ||||   |||
Sbjct: 225 gccgtcttcatcgatgcctcgtcgcaccgctaccttcgggaccagcaagccgaccaccag 284

                                                                       
Query: 188 gccatgtcgatgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgca 247
           | |   || |||||  |  ||||||||||||| | ||||||||||||||||||||| |||
Sbjct: 285 gacgcttcaatgtcgttaaatgaagtttctgcggttgtttctgtcttgcttggtttcgca 344

             
Query: 248 cc 249
           ||
Sbjct: 345 cc 346



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 308 ccatttgacaggcctcgtgctgttttcttgatgcaaattgatgg 351
           |||||||| || || |||||||||||| |  |||||||||||||
Sbjct: 405 ccatttgatagaccgcgtgctgttttcctcgtgcaaattgatgg 448
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 197      atgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgcaccacc 252
                |||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 28387363 atgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgcaccacc 28387418



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 131      gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaa 178
                ||||||||| |||| | |||||||| ||||||||||||||||||||||
Sbjct: 28387126 gccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaa 28387173



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 308      ccatttgacaggcctcgtgctgttttcttgatgcaaattgatggatcccatg 359
                ||||||||||| || || |||||||||||| ||||||| ||||||| |||||
Sbjct: 28387558 ccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatg 28387609



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 87       tctcctccgccgtcgccgcccctg 110
                |||||||||||| |||||||||||
Sbjct: 27922132 tctcctccgccggcgccgcccctg 27922155
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0044E16
          Length = 153296

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                      
Query: 197    atgtcacttgatgaagtttctgcagctgtttctgtcttgcttggttttgcaccacc 252
              |||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 116169 atgtcactagaccaagtttctgcggctgtttctgtcttgcttggttttgcaccacc 116224



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                              
Query: 131    gccgccttcatcgacggcgcgtcgcaccgctacctgcgggatcagcaa 178
              ||||||||| |||| | |||||||| ||||||||||||||||||||||
Sbjct: 115932 gccgccttcgtcgatgccgcgtcgcgccgctacctgcgggatcagcaa 115979



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 308    ccatttgacaggcctcgtgctgttttcttgatgcaaattgatggatcccatg 359
              ||||||||||| || || |||||||||||| ||||||| ||||||| |||||
Sbjct: 116364 ccatttgacagaccacgggctgttttcttgctgcaaatcgatggattccatg 116415
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>gb|BT014170.1| Lycopersicon esculentum clone 133309F, mRNA sequence
          Length = 1482

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 231 tcttgcttggttttgcaccacctgc 255
           ||||||||||||||||||| |||||
Sbjct: 208 tcttgcttggttttgcacctcctgc 232
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>gb|AC084163.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-287D23, complete
             sequence
          Length = 214292

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 432   ctacagggcttacagataagg 452
             |||||||||||||||||||||
Sbjct: 83347 ctacagggcttacagataagg 83367
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>emb|CR376837.5| Zebrafish DNA sequence from clone CH211-165B17 in linkage group 15,
             complete sequence
          Length = 77723

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 486   ctggatcagatgttcttgaca 506
             |||||||||||||||||||||
Sbjct: 76080 ctggatcagatgttcttgaca 76100
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 131    gccgccttcatcgacggcgcg 151
              |||||||||||||||||||||
Sbjct: 187020 gccgccttcatcgacggcgcg 187000
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>emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in linkage group 15,
             complete sequence
          Length = 200989

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 486   ctggatcagatgttcttgaca 506
             |||||||||||||||||||||
Sbjct: 82255 ctggatcagatgttcttgaca 82275
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>gb|AY112201.1| Zea mays CL4163_1 mRNA sequence
          Length = 1038

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 cgccttcatcgacggcgcgtc 153
           |||||||||||||||||||||
Sbjct: 654 cgccttcatcgacggcgcgtc 674
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 133     cgccttcatcgacggcgcgtc 153
               |||||||||||||||||||||
Sbjct: 2501776 cgccttcatcgacggcgcgtc 2501756
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>gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, complete sequence
          Length = 189241

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    agtatttacaaaaccaagat 411
              ||||||||||||||||||||
Sbjct: 184354 agtatttacaaaaccaagat 184373
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>ref|XM_483755.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 87  tctcctccgccgtcgccgcccctg 110
           |||||||||||| |||||||||||
Sbjct: 12  tctcctccgccggcgccgcccctg 35
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>gb|BT019291.1| Zea mays clone Contig964.F mRNA sequence
          Length = 725

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  tctcctccgccgtcgccgcc 106
           ||||||||||||||||||||
Sbjct: 278 tctcctccgccgtcgccgcc 259
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>gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, complete sequence
          Length = 194413

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    agtatttacaaaaccaagat 411
              ||||||||||||||||||||
Sbjct: 121184 agtatttacaaaaccaagat 121165
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     ttttcttgatgcaaattgat 349
               ||||||||||||||||||||
Sbjct: 3154069 ttttcttgatgcaaattgat 3154088
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>ref|XM_367879.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG07783.4) partial mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 113 ggtcagggacacgccgctgccgcc 136
           |||||||||| |||||||||||||
Sbjct: 555 ggtcagggactcgccgctgccgcc 578
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     ttttcttgatgcaaattgat 349
               ||||||||||||||||||||
Sbjct: 3076174 ttttcttgatgcaaattgat 3076193
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     ttttcttgatgcaaattgat 349
               ||||||||||||||||||||
Sbjct: 3076740 ttttcttgatgcaaattgat 3076759
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>gb|AY359575.1| Zea mays W64A acc oxidase (ACO20) mRNA, complete cds
          Length = 1262

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccgccgtcgccgcccctgag 112
           ||||||||||||||||||||
Sbjct: 689 ccgccgtcgccgcccctgag 670
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>gb|AY359574.1| Zea mays B73 acc oxidase (ACO20) gene, partial cds
          Length = 1516

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ccgccgtcgccgcccctgag 112
           ||||||||||||||||||||
Sbjct: 470 ccgccgtcgccgcccctgag 451
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>gb|AF211176.2| Botryotinia fuckeliana cystathionine beta-lyase (metC) gene,
           complete cds
          Length = 2921

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 ttgatgaagtttctgcagct 223
           ||||||||||||||||||||
Sbjct: 397 ttgatgaagtttctgcagct 378
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>ref|XM_445693.1| Candida glabrata CBS138, CAGL0D06622g partial mRNA
          Length = 3537

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 gtttctgtcttgcttggttt 243
           ||||||||||||||||||||
Sbjct: 283 gtttctgtcttgcttggttt 264
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     ttttcttgatgcaaattgat 349
               ||||||||||||||||||||
Sbjct: 3123419 ttttcttgatgcaaattgat 3123438
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>gb|AC107980.8| Homo sapiens chromosome 15, clone CTD-3118D7, complete sequence
          Length = 141868

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    gcaaaaagtgctgctacagg 438
              ||||||||||||||||||||
Sbjct: 103321 gcaaaaagtgctgctacagg 103302
to top
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    gtttctgtcttgcttggttt 243
              ||||||||||||||||||||
Sbjct: 632577 gtttctgtcttgcttggttt 632596
to top
>gb|AY233907.1| Ceratocystis polonica strain CMW5026 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233906.1| Ceratocystis polonica strain CMW1165 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233905.1| Ceratocystis polonica strain CMW7149 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233904.1| Ceratocystis polonica strain CMW7143 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233903.1| Ceratocystis polonica strain CMW7133 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233902.1| Ceratocystis polonica strain CMW7152 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233901.1| Ceratocystis polonica strain CMW1164 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233900.1| Ceratocystis polonica strain CMW7754 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233899.1| Ceratocystis polonica strain CMW7748 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233898.1| Ceratocystis polonica strain CMW10522 internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233897.1| Ceratocystis polonica strain CMW2210 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233896.1| Ceratocystis polonica strain CMW7151 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233895.1| Ceratocystis polonica strain CMW2286 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233894.1| Ceratocystis polonica strain CMW2284 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233893.1| Ceratocystis polonica strain CMW2272 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233892.1| Ceratocystis polonica strain CMW7138 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233891.1| Ceratocystis polonica strain CMW8874 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233890.1| Ceratocystis polonica strain CMW8845 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233889.1| Ceratocystis polonica strain CMW8830 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
to top
>gb|AY233888.1| Ceratocystis polonica strain CMW8873 internal transcribed spacer 1,
           5.8S ribosomal RNA gene, and internal transcribed spacer
           2, complete sequence
          Length = 528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 tgccggtagtatttacaaaa 404
           ||||||||||||||||||||
Sbjct: 80  tgccggtagtatttacaaaa 99
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>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+
              transporting ATP synthase mitochondrial F0 complex subunit
              g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1)
              pseudogene, three novel genes, the gene for a novel ENTH
              domain containing protein, the 5' end of the Sox30 gene for
              SRY-box containing gene 30 and three Cpg islands, complete
              sequence
          Length = 207877

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caccacctgccatgcttcct 265
              ||||||||||||||||||||
Sbjct: 126869 caccacctgccatgcttcct 126888
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>emb|BX470109.3| Mouse DNA sequence from clone RP23-59I3 on chromosome 4, complete
              sequence
          Length = 228869

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    atgccggtagtatttacaaa 403
              ||||||||||||||||||||
Sbjct: 124753 atgccggtagtatttacaaa 124772
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>emb|BX323006.12| Zebrafish DNA sequence from clone CH211-145H19 in linkage group 15,
              complete sequence
          Length = 161776

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ttctgcagctgtttctgtct 233
              ||||||||||||||||||||
Sbjct: 129193 ttctgcagctgtttctgtct 129212
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>emb|CR858889.1| Pongo pygmaeus mRNA; cDNA DKFZp459N191 (from clone DKFZp459N191)
          Length = 3376

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 83  gctttctcctccgccgtcgccgcc 106
           |||||||||||||||| |||||||
Sbjct: 37  gctttctcctccgccgccgccgcc 14
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>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 322     tcgtgctgttttcttgatgc 341
               ||||||||||||||||||||
Sbjct: 1817818 tcgtgctgttttcttgatgc 1817837
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     tctcctccgccgtcgccgcc 106
              ||||||||||||||||||||
Sbjct: 115900 tctcctccgccgtcgccgcc 115881
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>emb|BX470247.5| Zebrafish DNA sequence from clone DKEY-96N2 in linkage group 24,
             complete sequence
          Length = 59900

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ccacctgccatgcttcctgc 267
             ||||||||||||||||||||
Sbjct: 18658 ccacctgccatgcttcctgc 18677
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>ref|XM_685844.1| PREDICTED: Danio rerio similar to p130Cas-associated protein
            (p140Cap) (SNAP-25-interacting protein) (SNIP)
            (LOC562465), mRNA
          Length = 6326

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 248  ccacctgccatgcttcctgc 267
            ||||||||||||||||||||
Sbjct: 3050 ccacctgccatgcttcctgc 3069
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>emb|AL111267.1|CNS0196Z Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 ttgatgaagtttctgcagct 223
           ||||||||||||||||||||
Sbjct: 261 ttgatgaagtttctgcagct 280
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 251      cctgccatgcttcctgcacc 270
                ||||||||||||||||||||
Sbjct: 13900542 cctgccatgcttcctgcacc 13900523
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 401     aaaaccaagattgatggtgcaaaa 424
               ||||||||||||| ||||||||||
Sbjct: 4301930 aaaaccaagattgttggtgcaaaa 4301907
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 124      cgccgctgccgccttcatcg 143
                ||||||||||||||||||||
Sbjct: 16899790 cgccgctgccgccttcatcg 16899771
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 131     gccgccttcatcgacggcgc 150
               ||||||||||||||||||||
Sbjct: 8802346 gccgccttcatcgacggcgc 8802365
to top
>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1423D04
          Length = 154474

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   cgccgctgccgccttcatcg 143
             ||||||||||||||||||||
Sbjct: 32812 cgccgctgccgccttcatcg 32793
to top
>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0025G03
          Length = 139560

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    cgccgctgccgccttcatcg 143
              ||||||||||||||||||||
Sbjct: 129948 cgccgctgccgccttcatcg 129929
to top
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1014_E09
          Length = 184624

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 401    aaaaccaagattgatggtgcaaaa 424
              ||||||||||||| ||||||||||
Sbjct: 122984 aaaaccaagattgttggtgcaaaa 122961
to top
>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence
          Length = 256446

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    ttctgcagctgtttctgtct 233
              ||||||||||||||||||||
Sbjct: 249740 ttctgcagctgtttctgtct 249721
to top
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1150_A11
          Length = 142010

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 87     tctcctccgccgtcgccgcccctg 110
              |||||||||||| |||||||||||
Sbjct: 130210 tctcctccgccggcgccgcccctg 130233
to top
>dbj|AK061522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B06, full
           insert sequence
          Length = 936

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 87  tctcctccgccgtcgccgcccctg 110
           |||||||||||| |||||||||||
Sbjct: 12  tctcctccgccggcgccgcccctg 35
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 330     ttttcttgatgcaaattgat 349
               ||||||||||||||||||||
Sbjct: 3076046 ttttcttgatgcaaattgat 3076065
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 251      cctgccatgcttcctgcacc 270
                ||||||||||||||||||||
Sbjct: 13854822 cctgccatgcttcctgcacc 13854803
to top
>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144552

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   cctgccatgcttcctgcacc 270
             ||||||||||||||||||||
Sbjct: 37170 cctgccatgcttcctgcacc 37151
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>gb|AC131699.4| Mus musculus BAC clone RP23-440F17 from 1, complete sequence
          Length = 200544

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    atcccatgactctgtcgata 371
              ||||||||||||||||||||
Sbjct: 134929 atcccatgactctgtcgata 134948
to top
>gb|AC167197.6| Mus musculus chromosome 1, clone RP23-62B14, complete sequence
          Length = 220763

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    atcccatgactctgtcgata 371
              ||||||||||||||||||||
Sbjct: 117451 atcccatgactctgtcgata 117470


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,580,119
Number of Sequences: 3902068
Number of extensions: 4580119
Number of successful extensions: 106266
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105321
Number of HSP's gapped (non-prelim): 942
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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