ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25g04 |
|---|---|
| Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 174 bits (442), Expect = 1e-43 Identities = 91/151 (60%), Positives = 107/151 (70%) Frame = +2 Query: 119 CGFPAIFNLGDSNSDTGAFPALFPAVQPPYGRTFFGMPAGRQSDGRLTIDFMAQSLGLRY 298 C FPAIFN GDSNSDTG A F PP+G +FFG PAGR DGRL IDF+A+SLGL Y Sbjct: 26 CHFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPY 85 Query: 299 LSAYLDSLGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDVQVWQLQQFINRSRFVY 478 LSA+LDS+GSNF+ GANFA+A IR +N +L SG+SP SLDVQ Q F NRS+ V Sbjct: 86 LSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVR 145 Query: 479 DNDIGGVYREILPNPEQLISKALYTLDMGQN 571 GGVY+ +LP + SKALYT D+GQN Sbjct: 146 SR--GGVYKTMLPESDS-FSKALYTFDIGQN 173
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 154 bits (389), Expect = 2e-37 Identities = 83/152 (54%), Positives = 100/152 (65%), Gaps = 1/152 (0%) Frame = +2 Query: 119 CGFPAIFNLGDSNSDTGAFPALFPAVQPPYGRTFFGMPAGRQSDGRLTIDFMAQSLGLRY 298 C FPAIFN GDSNSDTG A F + PPYG TFF GR SDGRL IDF+A+S L Y Sbjct: 30 CDFPAIFNFGDSNSDTGGKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPY 89 Query: 299 LSAYLDSLGSNFTQGANFASAAGTIRRVNGSLWT-SGYSPISLDVQVWQLQQFINRSRFV 475 LS YL SLGSNF GA+FA+A TI+ + G+SP LDVQ Q +QFI RS+F+ Sbjct: 90 LSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPRSQFI 149 Query: 476 YDNDIGGVYREILPNPEQLISKALYTLDMGQN 571 + GG++ E++P E KALYT D+GQN Sbjct: 150 --RETGGIFAELVPE-EYYFEKALYTFDIGQN 178
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 42.7 bits (99), Expect = 7e-04 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 15/163 (9%) Frame = +2 Query: 128 PAIFNLGDSNSDTGAFPALFPAVQP---PYGRTF-FGMPAGRQSDGRLTIDFMAQSLGLR 295 PA+F GDS DTG L ++ PYG F F + GR S+G + D++A+ +G++ Sbjct: 203 PAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVK 262 Query: 296 -YLSAYLDS--LGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDV--------QVWQ 442 + AYLD ++ G +FAS +GY+P + + Q+ Sbjct: 263 EIVPAYLDPKIQPNDLLTGVSFASGG------------AGYNPTTSEAANAIPMLDQLTY 310 Query: 443 LQQFINRSRFVYDNDIGGVYREILPNPEQLISKALYTLDMGQN 571 Q +I + + + L QLISK + + G N Sbjct: 311 FQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSN 353
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 39.7 bits (91), Expect = 0.006 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 13/90 (14%) Frame = +2 Query: 128 PAIFNLGDSNSDTGAFPALFPAVQ---PPYGRTF-FGMPAGRQSDGRLTIDFMAQSLGLR 295 PA+F GDS DTG L ++ PYG F G+ GR S+GR+ D++++ LG++ Sbjct: 124 PAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVK 183 Query: 296 -YLSAYLDS--------LGSNFTQGANFAS 358 + AY+D S+ G +FAS Sbjct: 184 EIVPAYVDKKLQQNNELQQSDLLTGVSFAS 213
>SNIP1_HUMAN (Q8TAD8) Smad nuclear-interacting protein 1| Length = 396 Score = 38.5 bits (88), Expect = 0.014 Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 1/134 (0%) Frame = +1 Query: 163 HRCIPCPLPGGAAALRPDLLRHAGRPAKRRPPHHRLHGSKPGPPLPE-CVSGFSGEQLHA 339 HR LP G + L PA RRP H G P PP E SG G + Sbjct: 16 HRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDH---SGGSPSPPTSEPARSGHRGNRARG 72 Query: 340 GSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQ 519 S+ +++N + R + P + + + P R R+ + P + Sbjct: 73 VSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEH 132 Query: 520 PGAVDLQGALHLGH 561 A + H GH Sbjct: 133 RRARNSDRDRHRGH 146
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 36.6 bits (83), Expect = 0.052 Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 2/107 (1%) Frame = +1 Query: 229 AGRPAKRRPPHHRLHGSK--PGPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDL 402 AG + PP GS+ PGPP P G G Q ++G E+ + Sbjct: 1112 AGEKGEPGPP-----GSEGLPGPPGPAGPRGERGPQGNSG----EKGDQGFQGQPGFTGP 1162 Query: 403 RVQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQG 543 P FPG+ G P Q E R LPG P PG +QG Sbjct: 1163 TGSPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQG 1209
>CKR1_CHICK (P30373) Zinc finger protein CKR1| Length = 509 Score = 35.8 bits (81), Expect = 0.089 Identities = 41/147 (27%), Positives = 48/147 (32%), Gaps = 31/147 (21%) Frame = +1 Query: 163 HRCIPCPLPGGAAALRPDLLRHAGRPAKRRPP-----------------HHRLHGSKPGP 291 H+C C P AA LL H+ A RP H R+H + Sbjct: 169 HKCQHCGKPFAGAA---QLLAHSRGHAADRPHRCGDCGKGFVWASHLERHRRVHTGEKPY 225 Query: 292 PLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLR---------VQPHF-----PGR 429 PEC GE GS + RR+H S R LR VQ P R Sbjct: 226 ECPEC-----GEAFSQGSHLTKHRRSHARSGRTAAPLRKCFGQSSDLVQHRSRAGKKPQR 280 Query: 430 AGLAAPAVHQQEPLRLRQRHRRSLPGD 510 A PLR +R R GD Sbjct: 281 CAECGKAFRAAPPLRRHRRERSHRCGD 307
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 35.0 bits (79), Expect = 0.15 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Frame = +1 Query: 223 RHAGRPAKRRPPH-------HRLHGSKPGPPLPECVSGFSGEQLHAGSQFRERRRNHQAS 381 RHAGRP +R+PP HR H + P V G +Q R RR H + Sbjct: 164 RHAGRPRRRQPPRRGRSRGTHRRHLRQAPRP---AVRGPDEDQAREFRGPRHRRERHPPT 220 Query: 382 ERELVDLRVQP------HFPGRAGLAAP 447 R++ LR +P H GR G P Sbjct: 221 ARDV--LRGEPGHGDGHHLEGRRGRPRP 246
>COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y)| chain) Length = 1142 Score = 35.0 bits (79), Expect = 0.15 Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 1/105 (0%) Frame = +1 Query: 232 GRPAKRRPPHHRLHGSKPGPPLPECVSGFSG-EQLHAGSQFRERRRNHQASERELVDLRV 408 GR K PP KPGPP P G G Q G ++ + N + L + Sbjct: 409 GRRGKTGPP------GKPGPPGPPGPPGIQGIHQTLGGYYNKDNKGNDEHEAGGLKGDKG 462 Query: 409 QPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQG 543 + PG G P + EP + + GD +PG + QG Sbjct: 463 ETGLPGFPGSVGPKGQKGEP---GEPFTKGEKGDRGEPGVIGSQG 504 Score = 32.0 bits (71), Expect = 1.3 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 4/130 (3%) Frame = +1 Query: 166 RCIP----CPLPGGAAALRPDLLRHAGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQL 333 +CIP LPG + P H G P + + LHG+ PG P + GF G + Sbjct: 286 QCIPNKGEAGLPGAPGS--PGQKGHKGEPGE-----NGLHGA-PGFPGQKGEQGFEGSKG 337 Query: 334 HAGSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDP 513 G E+ + + L L + G G P P ++ PG P Sbjct: 338 ETG----EKGEQGEKGDPALAGLNGENGLKGDLGPHGP------PGPKGEKGDTGPPGPP 387 Query: 514 AQPGAVDLQG 543 A PG++ +QG Sbjct: 388 ALPGSLGIQG 397
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 33.5 bits (75), Expect = 0.44 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +1 Query: 418 FPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQG 543 FPG G P + EP L + R G+P +PG V QG Sbjct: 155 FPGLPGPQGPKGQKGEPYALSKEDRDKYRGEPGEPGLVGYQG 196 Score = 29.3 bits (64), Expect = 8.3 Identities = 39/148 (26%), Positives = 45/148 (30%), Gaps = 5/148 (3%) Frame = +1 Query: 115 PVRLPGHLQPR*LQLGHRCIPCPLPGGAAALRPDLLRHA-----GRPAKRRPPHHRLHGS 279 P+ LPG P G R IP + G R D G P + P R Sbjct: 752 PIGLPGPAGPP----GDRGIPGEVLGAQPGTRGDAGLPGQPGLKGLPGETGAPGFRGSQG 807 Query: 280 KPGPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQ 459 PG P + GF G G Q FPG G P Sbjct: 808 MPGMPGLKGQPGFPGPSGQPGQSGPPG----------------QHAFPGTPGREGPLGQP 851 Query: 460 QEPLRLRQRHRRSLPGDPAQPGAVDLQG 543 P R PGDP PG V ++G Sbjct: 852 GSPGLGGLPGDRGEPGDPGVPGPVGMKG 879
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 33.5 bits (75), Expect = 0.44 Identities = 52/183 (28%), Positives = 60/183 (32%), Gaps = 14/183 (7%) Frame = +1 Query: 37 GDQTRVCPVA-----GGGGAKALCGSAL**FPVRLPGHLQPR*LQLGHR----CIPCP-- 183 G Q CP G G + L G P PG QP H CI CP Sbjct: 83 GPQASNCPAGPPGPPGASGDRGLDGQP---GPAGKPG--QPGVAGPAHHQQQECIKCPQG 137 Query: 184 LPGGAAALRPDLLRHAGRPAKRRP---PHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFR 354 PG A A G P + P P HG GPP P +G +G AG+ Sbjct: 138 APGPAGA--------PGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGN 189 Query: 355 ERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVD 534 R Q+ +R R P GR G P PG P QPG+ Sbjct: 190 PGRPG-QSGQRS----RGLPGPSGRPGPQGP------------------PGAPGQPGSGS 226 Query: 535 LQG 543 G Sbjct: 227 TPG 229
>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related| protein) Length = 440 Score = 33.1 bits (74), Expect = 0.58 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +1 Query: 181 PLPGGAAALRPDLLRHAGRPAKRRPPHHRLHGSKP---GPPLP 300 P G A P ++R+ R A PP +R+HGS+P G P P Sbjct: 319 PSRGAAPPPPPPMIRNGARDAPPPPPPYRMHGSEPPSRGKPPP 361
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 32.7 bits (73), Expect = 0.75 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +1 Query: 181 PLPGGAAALRPDLLRHAGRPAKRRPPHHRLHGSKP---GPPLP 300 P G A P ++R+ R A PP +R+HGS+P G P P Sbjct: 319 PSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPP 361
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 32.7 bits (73), Expect = 0.75 Identities = 27/86 (31%), Positives = 35/86 (40%) Frame = +1 Query: 286 GPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQE 465 GPP GF G + G Q ++ R H EL + Q PG AG+ P E Sbjct: 875 GPP------GFPGPKGPPGHQGKDGRPGHPGQRGEL-GFQGQTGPPGPAGVLGPQGKTGE 927 Query: 466 PLRLRQRHRRSLPGDPAQPGAVDLQG 543 L +R PG P + G L+G Sbjct: 928 VGPLGERGPPGPPGPPGEQGLPGLEG 953
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 32.3 bits (72), Expect = 0.98 Identities = 42/145 (28%), Positives = 52/145 (35%), Gaps = 17/145 (11%) Frame = +1 Query: 187 PGGAAALRPDLLRHAGRPAKRRP--PHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFRER 360 P AA D+ R RPA RP P ++ GS+ PP P G +GS Sbjct: 551 PPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPG-------SGSP---- 599 Query: 361 RRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDP--------- 513 QA R LV + RA P + P R++ RRS P P Sbjct: 600 -GTPQALPRRLVGSSL------RAPTVPPPLPPTPPQPARRQSRRS-PASPSPASPGPAS 651 Query: 514 ------AQPGAVDLQGALHLGHGPE 570 + P VDL A G PE Sbjct: 652 PSPVSLSNPAQVDLGAATAEGGAPE 676
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 32.0 bits (71), Expect = 1.3 Identities = 29/91 (31%), Positives = 34/91 (37%) Frame = +1 Query: 286 GPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQE 465 GPP P+ G GE + R+R R + E LV + P PG G P Sbjct: 157 GPPGPQGPKGQKGEPYALPKEERDRYRG-EPGEPGLVGFQGPPGRPGHVGQMGPV---GA 212 Query: 466 PLRLRQRHRRSLPGDPAQPGAVDLQGALHLG 558 P R PG P PG QG LG Sbjct: 213 PGR---------PGPPGPPGPKGQQGNRGLG 234 Score = 30.4 bits (67), Expect = 3.7 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 418 FPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQG 543 F G G P + EP L + R G+P +PG V QG Sbjct: 155 FTGPPGPQGPKGQKGEPYALPKEERDRYRGEPGEPGLVGFQG 196
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 32.0 bits (71), Expect = 1.3 Identities = 39/130 (30%), Positives = 45/130 (34%), Gaps = 5/130 (3%) Frame = +1 Query: 154 QLGHRCIPCPLPGGAAALRPDLLRHAGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQL 333 +L R P P P A+ P G PA R P +G P PL +G L Sbjct: 756 RLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPL-------AGPAL 808 Query: 334 HAGSQFRERRRNHQASERELVDLRVQPH-FPGRAGLAAPAVHQQEPLRLRQRHRRSLPG- 507 A RR +AS PH PG A PA LR R + P Sbjct: 809 PA-------RRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLRPTPAARAAAPSP 861 Query: 508 ---DPAQPGA 528 D A PGA Sbjct: 862 DRRDSASPGA 871
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 31.6 bits (70), Expect = 1.7 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 13/133 (9%) Frame = +1 Query: 160 GHRCIPCPLPGGAAALRPDLLRHAGRPAKRRPPHHR--------LHGSKPGPPLPECVSG 315 G I P G +RP H G A+ PP ++ LHGS P S Sbjct: 215 GMTTIERPHGAGTLVIRPSGPHHQGTLARPHPPPYQSKPTTASDLHGSASHPSSSSSSSS 274 Query: 316 FSGEQ--LHAGSQFRERRRNHQASERELVDLRVQPHF---PGRAGLAAPAVHQQEPLRLR 480 S H +Q +++++ HQ +++ + +P F P G P + + L Sbjct: 275 SSNPNSIWHTSTQ-QQQQQQHQQNQQNHWQMTTEPSFITKPRPTGWTKPGI-----VNLP 328 Query: 481 QRHRRSLPGDPAQ 519 R S P P + Sbjct: 329 MPARPSKPSKPTK 341
>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 464 Score = 31.2 bits (69), Expect = 2.2 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 229 AGRPAKRRPPHHRLHGSKPGPPLPE 303 AG P +RPP ++G P PPLPE Sbjct: 225 AGPPGVKRPPPPLMNGLPPRPPLPE 249
>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 995 Score = 30.8 bits (68), Expect = 2.9 Identities = 33/133 (24%), Positives = 47/133 (35%), Gaps = 24/133 (18%) Frame = +1 Query: 229 AGRPAKRRPP--------HHRLHGSK-PGPPLPECVSGFSGEQLHAGSQFRERRRNHQAS 381 AG PA + PP H +H P P SG + + R +N +S Sbjct: 400 AGHPAAKLPPDSLAGFQQHSLMHSPLVPADKAPTPSSGLDSKAEVTNGETRVPPQNGGSS 459 Query: 382 EREL------VDLRVQPHF-----PGRAGLAAPA----VHQQEPLRLRQRHRRSLPGDPA 516 E V+ +P PG G AP+ H P+R++ PG Sbjct: 460 ESPAAPRTIKVEAAEEPEATRASGPGEPGPQAPSRTPSPHSPNPVRVKTELSSPTPGSSP 519 Query: 517 QPGAVDLQGALHL 555 PG + + G L L Sbjct: 520 GPGELTMAGTLFL 532
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 30.8 bits (68), Expect = 2.9 Identities = 28/104 (26%), Positives = 35/104 (33%) Frame = +1 Query: 232 GRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLRVQ 411 G P + PP GPP P G SG+ +G R R Sbjct: 42 GAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGKDGESGRPGRPGPRG-------------- 87 Query: 412 PHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQG 543 FPG G+ PA P R G+ +PGA L+G Sbjct: 88 --FPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGEPGAPGLKG 129
>AMOL2_HUMAN (Q9Y2J4) Angiomotin-like protein 2 (Leman coiled-coil protein)| (LCCP) Length = 779 Score = 30.8 bits (68), Expect = 2.9 Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 1/120 (0%) Frame = +1 Query: 211 PDLLRHAGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFRERRRNH-QASER 387 P L R+ P R PP P P P V ++R R H Q +E Sbjct: 185 PQLARNQQGPPLRGPPAEGPESRGPPPQYPHVVLAHETTTAVTDPRYRARGSPHFQHAEV 244 Query: 388 ELVDLRVQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQGALHLGHGP 567 ++ +V P F + QQ+ + Q+ + P P P A LGHGP Sbjct: 245 RILQAQVPPVF----------LQQQQQYQYLQQSQEHPP--PPHPAA--------LGHGP 284
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 27.3 bits (59), Expect(2) = 3.3 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 229 AGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQ 330 AG+ ++ P H H PGPP P+ G G+Q Sbjct: 1274 AGQHQQQHPQHQ--HPGLPGPPPPQQQQGQQGQQ 1305 Score = 21.6 bits (44), Expect(2) = 3.3 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = +3 Query: 324 GATSRREPISRAPPEPSGE*TGACGPQGTA 413 G + P+SR P P GA G G++ Sbjct: 1345 GGSGYPTPVSRTPGSPYPSQPGAYGQYGSS 1374
>ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 19) (Meltrin beta) (Metalloprotease and disintegrin dentritic antigen marker) (MADDAM) Length = 956 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +1 Query: 211 PDLLRHAGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQ 348 P++LR +P R PP + L G P PLP +S + GSQ Sbjct: 781 PEILRKPSQPPPRPPPDY-LRGGSPPAPLPAHLSRAARNSPGPGSQ 825
>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 475 Score = 30.4 bits (67), Expect = 3.7 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 229 AGRPAKRRPPHHRLHGSKPGPPLPECV 309 AG P +RPP ++G P PPLP+ + Sbjct: 215 AGPPGVKRPPPPLMNGLPPRPPLPDAL 241
>CLA4_ASHGO (Q9HFW2) Serine/threonine-protein kinase CLA4 (EC 2.7.11.1)| Length = 793 Score = 30.4 bits (67), Expect = 3.7 Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 10/120 (8%) Frame = +1 Query: 238 PAKRRPPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFRERRRNHQAS----ERELVDLR 405 P K PP HR + GP P G S + ER N+ + +++L Sbjct: 337 PPKSLPPLHR---DEEGPTAP---LGNSVSSVATKESPTERLLNNLSETSLMQKQLPAKP 390 Query: 406 VQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPG--AVDLQ----GALHLGHGP 567 V P P G AP PLRL+ + R PG PAQPG A D + A+ HGP Sbjct: 391 VAP--PSSVGPVAP------PLRLQPQ--RVAPGRPAQPGPHAPDTRPGGPNAMKQQHGP 440
>ISPDF_WOLSU (Q7MQW9) IspD/ispF bifunctional enzyme [Includes:| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT); 2-C-methyl-D-erythritol 2,4-cyclod Length = 379 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -2 Query: 394 QAPVHSPDGSGGAREIGSLREVAPQRIQIRTQVTEAQALSHEVDGEAAVA 245 QAP SP R +G + EV+ QRI ++ TE+ +G A A Sbjct: 313 QAPKLSPYKEAMERRLGEVMEVSRQRISVKATTTESLGFVGRKEGVAVSA 362
>GLI4_HUMAN (P10075) Zinc finger protein GLI4 (Krueppel-related zinc finger| protein 4) (HKR4 protein) Length = 376 Score = 30.0 bits (66), Expect = 4.9 Identities = 17/38 (44%), Positives = 18/38 (47%) Frame = +3 Query: 174 SLPSSRRCSRPTAGPSSACRPAGKATAASPSTSWLKAW 287 SLP RCS SSA RPAG+ A P AW Sbjct: 106 SLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPRGAW 143
>JPH1_RABIT (Q9GKY8) Junctophilin-1 (Junctophilin type 1) (JP-1)| (Mitsugumin-72) (Mg72) Length = 662 Score = 30.0 bits (66), Expect = 4.9 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -2 Query: 397 PQAPVHSPDGSGGAREIGSLREVAPQRIQ-IRTQVTEAQALSHEVDGEAAVALPAGRHAE 221 P P + S GAR R VA +++ I + ++A + EV + + +GRH Sbjct: 480 PPKPAKKQNPSSGARLNQDKRGVAEEQVTAIVNKPLTSKAPTKEVGAAVSQSKYSGRHHV 539 Query: 220 EGPAVGRLHRREEG 179 P+ G LH + G Sbjct: 540 PNPSNGELHSQYHG 553
>YAV1_XANCV (P14727) Hypothetical 122 kDa avirulence protein in avrBs3 region| Length = 1164 Score = 30.0 bits (66), Expect = 4.9 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = +1 Query: 331 LHAGSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQEPLRLR-QRHRRSLPG 507 +H G Q R R S+R + Q F R A+H PL R +R R S+ G Sbjct: 1055 MHEGDQTRASSRKRSRSDRAVTGPSAQQSFEVRVPEQRDALHL--PLSWRVKRPRTSIGG 1112 Query: 508 ---DPAQPGAVDL 537 DP P A DL Sbjct: 1113 GLPDPGTPTAADL 1125
>PHAR2_HUMAN (O75167) Phosphatase and actin regulator 2| Length = 634 Score = 30.0 bits (66), Expect = 4.9 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 180 PSSRRCSRPTAGPSSACRPAGKATAASPSTS 272 P+SR +R AG S + + G +ASPSTS Sbjct: 211 PASRNTTREAAGSSHSKKTTGSKASASPSTS 241
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 29.6 bits (65), Expect = 6.4 Identities = 37/144 (25%), Positives = 48/144 (33%), Gaps = 19/144 (13%) Frame = +1 Query: 169 CIPCPLPGGAAAL-------------RPDLLRHAGRPAKRR------PPHHRLHGSKPGP 291 C C LPG A P L + G P ++ PP PGP Sbjct: 63 CDACCLPGAAGPAGTPGKPGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGP 122 Query: 292 PLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQEPL 471 P P SG +G + GS ++ QP PG G + P + P Sbjct: 123 PGPPGPSGDAGGNGNPGSPGQDG----------------QPGAPGNKGPSGPNGNPGAPG 166 Query: 472 RLRQRHRRSLPGDPAQPGAVDLQG 543 Q + P +P PGA QG Sbjct: 167 APGQ-PGQDAPSEPITPGAPGPQG 189
>GCSP_RALSO (Q8XU98) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 982 Score = 29.6 bits (65), Expect = 6.4 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 2/103 (1%) Frame = +2 Query: 179 ALFPAVQPPYGRTFFGMPAGRQSDGRLTIDFMAQSLGLRYLSAYLDSLGSNFTQGANFAS 358 AL AV PP R GMP G + +A+ G+ + + SL QG Sbjct: 56 ALIDAVIPPAIRRQDGMPLGEFTQPLTEEAALAKLRGIAGQNRVVRSL---IGQGYYGTH 112 Query: 359 AAGTIRR--VNGSLWTSGYSPISLDVQVWQLQQFINRSRFVYD 481 G I R + W + Y+P ++ +L+ +N + V D Sbjct: 113 TPGVILRNILENPAWYTAYTPYQPEISQGRLEAMLNFQQMVMD 155
>FTSZ_STRCO (P45500) Cell division protein ftsZ| Length = 399 Score = 29.6 bits (65), Expect = 6.4 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 6/83 (7%) Frame = -2 Query: 370 GSGGAREIGSLREVAPQRIQIRTQVTEAQALSHEVDGEAAVALPAGRHAEEG------PA 209 G GG I + EV + ++ T+AQAL + +A V L GR G PA Sbjct: 17 GGGGVNAINRMIEVGLKGVEFIAINTDAQAL---LMSDADVKLDVGRELTRGLGAGANPA 73 Query: 208 VGRLHRREEGRECTGVRVGVTEV 140 VGR + E V G V Sbjct: 74 VGRKAAEDHREEIEEVLKGADMV 96
>FTSZ_STRGR (P45501) Cell division protein ftsZ| Length = 407 Score = 29.6 bits (65), Expect = 6.4 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 6/83 (7%) Frame = -2 Query: 370 GSGGAREIGSLREVAPQRIQIRTQVTEAQALSHEVDGEAAVALPAGRHAEEG------PA 209 G GG I + EV + ++ T+AQAL + +A V L GR G PA Sbjct: 17 GGGGVNAINRMIEVGLKGVEFIAINTDAQAL---LMSDADVKLDVGRELTRGLGAGANPA 73 Query: 208 VGRLHRREEGRECTGVRVGVTEV 140 VGR + E V G V Sbjct: 74 VGRKAAEDHREEIEEVLKGADMV 96
>Y200_ANASP (Q8Z098) UPF0272 protein All0200| Length = 426 Score = 29.6 bits (65), Expect = 6.4 Identities = 21/84 (25%), Positives = 39/84 (46%) Frame = +2 Query: 263 IDFMAQSLGLRYLSAYLDSLGSNFTQGANFASAAGTIRRVNGSLWTSGYSPISLDVQVWQ 442 +D + LGL +L D+ G + F + GT+R +G + P+ +++W+ Sbjct: 137 VDIVGTCLGLDWLGIASDNAGFPLLYCSAFPTGGGTVRAAHGQMAV----PVPAVLKLWE 192 Query: 443 LQQFINRSRFVYDNDIGGVYREIL 514 + R VY N G+ RE++ Sbjct: 193 M-----RGCPVYSN---GIDRELV 208
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.6 bits (65), Expect = 6.4 Identities = 40/145 (27%), Positives = 50/145 (34%), Gaps = 21/145 (14%) Frame = +1 Query: 172 IPCPLPGGAAALRPDLLRHAGRPAKRRPPHHR----LHGSKPGPPLPECVSGFSGEQLHA 339 I P P G+A + G P R P R + G + GPP P V G G Sbjct: 696 IGLPGPKGSAG-------NPGEPGLRGPEGSRGLPGVEGPR-GPPGPRGVQGEQGATGLP 747 Query: 340 GSQFRERRRNHQASERELVDLRVQPHF-----------------PGRAGLAAPAVHQQEP 468 G Q R +++ +Q HF PGR G P E Sbjct: 748 GVQGPPGRAPTDQHIKQVCMRVIQEHFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGEN 807 Query: 469 LRLRQRHRRSLPGDPAQPGAVDLQG 543 Q R LPG PGA+ L+G Sbjct: 808 GFPGQMGIRGLPGIKGPPGALGLRG 832
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.6 bits (65), Expect = 6.4 Identities = 30/106 (28%), Positives = 36/106 (33%) Frame = +1 Query: 226 HAGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLR 405 HAG R P + GPP P+ V G GEQ AG Sbjct: 512 HAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGP-------------------- 551 Query: 406 VQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQG 543 PG GL PA E + + R LPG+ PG +G Sbjct: 552 -----PGFQGLPGPAGTAGE---VGKPGERGLPGEFGLPGPAGPRG 589
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 29.6 bits (65), Expect = 6.4 Identities = 29/105 (27%), Positives = 33/105 (31%) Frame = +1 Query: 229 AGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLRV 408 AG P PP H PG P + G G+ AG Sbjct: 175 AGPPGPPGPPGSSGHPGSPGSPGYQGPPGEPGQAGPAGP--------------------- 213 Query: 409 QPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQG 543 P PG G A PA E R + R LPG P G + G Sbjct: 214 -PGPPGALGPAGPAGKDGESGRPGRPGERGLPGPPGIKGPAGMPG 257
>PR285_HUMAN (Q9BYK8) Peroxisomal proliferator-activated receptor A-interacting| complex 285 kDa protein (EC 3.6.1.-) (ATP-dependent helicase PRIC285) (PPAR-alpha-interacting complex protein 285) (PPAR-gamma DBD-interacting protein 1) (PDIP1) Length = 2649 Score = 29.6 bits (65), Expect = 6.4 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Frame = +1 Query: 175 PCPLPGGAAALRPDLLRHAGRPAKRRPPHHRLH---GSKPGPPLPECV 309 PCP+P G+ L AGRP R R++ GS P PLP V Sbjct: 1768 PCPVPYGSLQLAEHPHALAGRPGLRLLWRRRVYSAQGSSPPLPLPGTV 1815
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 29.6 bits (65), Expect = 6.4 Identities = 27/82 (32%), Positives = 33/82 (40%) Frame = +1 Query: 280 KPGPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQ 459 +PGPP PE G GE G + S+ E D P PG G++ P +Q Sbjct: 930 QPGPPGPEGEKGGKGEPGLPGPP-GPVDPDLLGSKGEKGD----PGLPGIPGVSGPKGYQ 984 Query: 460 QEPLRLRQRHRRSLPGDPAQPG 525 LPGDP QPG Sbjct: 985 ------------GLPGDPGQPG 994
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 29.6 bits (65), Expect = 6.4 Identities = 25/87 (28%), Positives = 34/87 (39%) Frame = +1 Query: 283 PGPPLPECVSGFSGEQLHAGSQFRERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQ 462 PG P P GF GE+ G+ + RR GR G P H+ Sbjct: 974 PGEPGPPGDDGFPGERGDKGTPGMQGRRGEL----------------GRYG--PPGFHRG 1015 Query: 463 EPLRLRQRHRRSLPGDPAQPGAVDLQG 543 EP ++ + PG P PG+ L+G Sbjct: 1016 EP---GEKGQPGPPGPPGPPGSTGLRG 1039
>RTN4_HUMAN (Q9NQC3) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)| (Foocen) (Neuroendocrine-specific protein) (NSP) (Neuroendocrine-specific protein C homolog) (RTN-x) (Reticulon-5) Length = 1192 Score = 26.2 bits (56), Expect(2) = 7.5 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +1 Query: 172 IPCPLPGGAAALRPDLLRHAGRPAKRRPP 258 +P P P AAA+ P L P R PP Sbjct: 117 VPAPSPLSAAAVSPSKLPEDDEPPARPPP 145 Score = 21.6 bits (44), Expect(2) = 7.5 Identities = 10/27 (37%), Positives = 12/27 (44%) Frame = +3 Query: 342 EPISRAPPEPSGE*TGACGPQGTAPFP 422 EP +R PP P + P T P P Sbjct: 138 EPPARPPPPPPASVSPQAEPVWTPPAP 164
>ZN408_HUMAN (Q9H9D4) Zinc finger protein 408 (PR-domain zinc finger protein 17)| Length = 720 Score = 29.3 bits (64), Expect = 8.3 Identities = 41/153 (26%), Positives = 51/153 (33%) Frame = +1 Query: 34 HGDQTRVCPVAGGGGAKALCGSAL**FPVRLPGHLQPR*LQLGHRCIPCPLPGGAAALRP 213 H + +CPV CG AL P L H + L G R PCP G A L Sbjct: 546 HTGEAHLCPV---------CGKALR-DPHTLRAHER---LHSGERPFPCPQCGRAYTLAT 592 Query: 214 DLLRHAGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFRERRRNHQASEREL 393 L RH + +P P C G++ + R HQ S R Sbjct: 593 KLRRHLKSHLEDKPYR-----------CPTCGMGYT---------LPQSLRRHQLSHRPE 632 Query: 394 VDLRVQPHFPGRAGLAAPAVHQQEPLRLRQRHR 492 P P A + Q EP +L HR Sbjct: 633 APCS-PPSVPSAASEPTVVLLQAEP-QLLDTHR 663
>NEB2_RAT (O35274) Neurabin-2 (Neurabin-II) (Spinophilin) (Protein| phosphatase 1 regulatory subunit 9B) (Neural tissue-specific F-actin-binding protein II) (p130) (PP1bp134) Length = 817 Score = 29.3 bits (64), Expect = 8.3 Identities = 27/132 (20%), Positives = 47/132 (35%) Frame = +1 Query: 175 PCPLPGGAAALRPDLLRHAGRPAKRRPPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQFR 354 P P P G AA D P ++PP HR+ ++P PP P V ++ + Sbjct: 256 PPPAPSGDAATEKDR-----GPGGQQPPQHRVAPARP-PPKPREVRKIKPVEVEESGE-- 307 Query: 355 ERRRNHQASERELVDLRVQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVD 534 +++ E++ V H G P + ++P + A Sbjct: 308 ---SEAESAPGEVIQAEVTVHAALENGSTTATTASPAP---EEPKAEAVPEEEASSSVAT 361 Query: 535 LQGALHLGHGPE 570 L+ + G P+ Sbjct: 362 LERGVDNGRAPD 373
>K0553_HUMAN (Q9UKJ3) Protein KIAA0553| Length = 1089 Score = 29.3 bits (64), Expect = 8.3 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -2 Query: 334 EVAPQRIQIRTQ-VTEAQALSHEVDGEAAVALPAGRHAEEGP 212 +V+ Q ++ +Q V+E Q E ++A PAG+ ++EGP Sbjct: 76 DVSDQSLESHSQKVSETQMCESNSSKETSLATPAGKESQEGP 117
>JPH1_HUMAN (Q9HDC5) Junctophilin-1 (Junctophilin type 1) (JP-1)| Length = 661 Score = 29.3 bits (64), Expect = 8.3 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%) Frame = -2 Query: 388 PVHSPDGSGGAREIGSLREVAPQRIQIRTQVTEAQALSHEVDGEAAVALP----AGRHAE 221 P+ + S GAR R VA +++ T + +S EA +P +GRH Sbjct: 482 PLKKQNPSSGARLNQDKRSVADEQV---TAIVNKPLMSKAPTKEAGAVVPQSKYSGRHHI 538 Query: 220 EGPAVGRLHRREEG 179 P+ G LH + G Sbjct: 539 PNPSNGELHSQYHG 552
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 29.3 bits (64), Expect = 8.3 Identities = 36/127 (28%), Positives = 45/127 (35%), Gaps = 8/127 (6%) Frame = +1 Query: 187 PGGAAALRPDLLRHAGRPAKRR------PPHHRLHGSKPGPPLPECVSGFSGEQLHAGSQ 348 PG A P L + GRP ++ PP PGPP P G SGE G Sbjct: 117 PGKPGA--PGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLP 174 Query: 349 FRERRRNHQASERE--LVDLRVQPHFPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQP 522 ++ + P PG G+ A Q EPL +PG+P P Sbjct: 175 GQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPA----QSEPL---------IPGEPGPP 221 Query: 523 GAVDLQG 543 G QG Sbjct: 222 GEAGPQG 228
>HECD1_HUMAN (Q9ULT8) E3 ubiquitin-protein ligase HECTD1 (HECT domain-containing| protein 1) (E3 ligase for inhibin receptor) (EULIR) Length = 2612 Score = 29.3 bits (64), Expect = 8.3 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = +3 Query: 210 AGPSSACRPAGKATAASPSTS 272 +GPSSAC+P G++T +PST+ Sbjct: 248 SGPSSACKP-GRSTTGAPSTT 267
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 29.3 bits (64), Expect = 8.3 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +1 Query: 226 HAGRPAKRRPPHHRLHGSKPGPPLPE 303 HA P PP H LH + PGP LPE Sbjct: 44 HAPPPPPPPPPPH-LHAAHPGPALPE 68
>DAAM1_HUMAN (Q9Y4D1) Disheveled-associated activator of morphogenesis 1| Length = 1078 Score = 29.3 bits (64), Expect = 8.3 Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 1/96 (1%) Frame = +1 Query: 13 ASIGSSIHGDQTR-VCPVAGGGGAKALCGSAL**FPVRLPGHLQPR*LQLGHRCIPCPLP 189 A + + +H R VC GG + G FP +PG L P P PLP Sbjct: 509 ADLTAQLHELSRRAVCASIPGGPSPGAPGGP---FPSSVPGSLLPP-------PPPPPLP 558 Query: 190 GGAAALRPDLLRHAGRPAKRRPPHHRLHGSKPGPPL 297 GG P L G P PP PG P+ Sbjct: 559 GGMLPPPPPPLPPGGPPPPPGPPPLGAIMPPPGAPM 594
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 29.3 bits (64), Expect = 8.3 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = +1 Query: 418 FPGRAGLAAPAVHQQEPLRLRQRHRRSLPGDPAQPGAVDLQGALHLGHGP 567 FPG GL P Q E + + GDP +PG L GA L P Sbjct: 526 FPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNP 575 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,810,057 Number of Sequences: 219361 Number of extensions: 1885117 Number of successful extensions: 8756 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 7467 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8650 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
