ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25g01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507527.1| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1328 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 336 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 395 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 396 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 455 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 456 caacgtccccgtcggcggcggctgccgcaagaccaagcg 494 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 |||||||||||||||| ||||||| || || ||||||||||| Sbjct: 198 catgcaggagttccagtccatcccggggctcgccgggcggctg 240
>ref|XM_467571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1277 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 282 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 341 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 342 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 401 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 402 caacgtccccgtcggcggcggctgccgcaagaccaagcg 440 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 |||||||||||||||| ||||||| || || ||||||||||| Sbjct: 144 catgcaggagttccagtccatcccggggctcgccgggcggctg 186
>ref|XM_506950.2| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1343 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 342 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 401 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 402 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 461 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 462 caacgtccccgtcggcggcggctgccgcaagaccaagcg 500 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 |||||||||||||||| ||||||| || || ||||||||||| Sbjct: 204 catgcaggagttccagtccatcccggggctcgccgggcggctg 246
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 268 bits (135), Expect = 2e-68 Identities = 159/167 (95%) Strand = Plus / Plus Query: 230 gaggtgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactac 289 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 10112341 gaggtgcggtgcccgcggtgcgactcgtcgaacaccaagttctgctactacaacaactac 10112400 Query: 290 aacctctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggc 349 |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 10112401 aacctctcccagccccgccacttctgcaaggcgtgccgccgctactggaccaagggcggc 10112460 Query: 350 ctcctccgcaacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10112461 ctcctccgcaacgtccccgtcggcggcggctgccgcaagcccaagcg 10112507 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 ||||||||||||||| ||| ||||||| ||| |||| |||||| Sbjct: 10112256 catgcaggagttccaccccgtccccgggctggccggccggctg 10112298 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gccgagcagagcagatagatagc 27 ||||||||||||||||||||||| Sbjct: 10112125 gccgagcagagcagatagatagc 10112147
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 30226458 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 30226399 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 30226398 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 30226339 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 30226338 caacgtccccgtcggcggcggctgccgcaagaccaagcg 30226300 Score = 172 bits (87), Expect = 8e-40 Identities = 135/151 (89%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 29257628 gtgcccgcggtgcgagtcgacgcacaccaagttctgctactacaataactacagcctctc 29257569 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 29257568 gcagccgcgctacttctgcaagacgtgccgccgctactggaccaagggcggctcgctccg 29257509 Query: 358 caacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 29257508 gaacgtccccgtcggcggcggctgccgcaag 29257478 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 27455616 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 27455557 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 27455556 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgc 27455497 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 27455496 aacgtccccgtcggcggcggct 27455475 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggc 322 |||||||||||||||||||||||||||| | | ||||||||||| |||||||| | Sbjct: 8590695 accaagttctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgag 8590636 Query: 323 tgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggctgc 382 |||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 8590635 tgccgccgctactggacccagggcggctccctccgcaacgtccccgtcggcggcggctgc 8590576 Query: 383 cgcaag 388 |||||| Sbjct: 8590575 cgcaag 8590570 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 |||||||||||||||| ||||||| || || ||||||||||| Sbjct: 30226596 catgcaggagttccagtccatcccggggctcgccgggcggctg 30226554
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 268 bits (135), Expect = 2e-68 Identities = 159/167 (95%) Strand = Plus / Plus Query: 230 gaggtgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactac 289 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 78707 gaggtgcggtgcccgcggtgcgactcgtcgaacaccaagttctgctactacaacaactac 78766 Query: 290 aacctctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggc 349 |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 78767 aacctctcccagccccgccacttctgcaaggcgtgccgccgctactggaccaagggcggc 78826 Query: 350 ctcctccgcaacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 78827 ctcctccgcaacgtccccgtcggcggcggctgccgcaagcccaagcg 78873 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 ||||||||||||||| ||| ||||||| ||| |||| |||||| Sbjct: 78622 catgcaggagttccaccccgtccccgggctggccggccggctg 78664 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gccgagcagagcagatagatagc 27 ||||||||||||||||||||||| Sbjct: 78491 gccgagcagagcagatagatagc 78513
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 27375 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 27316 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 27315 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 27256 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 27255 caacgtccccgtcggcggcggctgccgcaagaccaagcg 27217 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 |||||||||||||||| ||||||| || || ||||||||||| Sbjct: 27513 catgcaggagttccagtccatcccggggctcgccgggcggctg 27471
>dbj|AK100892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130J11, full insert sequence Length = 1328 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 336 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 395 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 396 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 455 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 456 caacgtccccgtcggcggcggctgccgcaagaccaagcg 494 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccc 144 |||||||||||||||| ||||||| Sbjct: 197 catgcaggagttccagtccatccc 220
>dbj|AK101321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E07, full insert sequence Length = 1343 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 342 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 401 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 402 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 461 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 462 caacgtccccgtcggcggcggctgccgcaagaccaagcg 500 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 |||||||||||||||| ||||||| || || ||||||||||| Sbjct: 204 catgcaggagttccagtccatcccggggctcgccgggcggctg 246
>dbj|AK061000.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F09, full insert sequence Length = 1277 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 282 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 341 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 342 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 401 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 402 caacgtccccgtcggcggcggctgccgcaagaccaagcg 440 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 |||||||||||||||| ||||||| || || ||||||||||| Sbjct: 144 catgcaggagttccagtccatcccggggctcgccgggcggctg 186
>dbj|AB028132.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1331 Score = 268 bits (135), Expect = 2e-68 Identities = 153/159 (96%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 325 gtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctctc 384 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 385 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 444 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 445 caacgtccccgtcggcggcggctgccgcaagaccaagcg 483 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 121 catgcaggagttccagcccatccccggcctgaccgggcggctg 163 |||||||||||||||| ||||||| || || ||||||||||| Sbjct: 187 catgcaggagttccagtccatcccggggctcgccgggcggctg 229
>gb|AY955493.2| Triticum aestivum Dof1 mRNA, complete cds Length = 1000 Score = 252 bits (127), Expect = 1e-63 Identities = 151/159 (94%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| || Sbjct: 248 gtgcccgcggtgcgagtccaccaacaccaagttctgctactacaacaactacaacctgtc 307 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 308 gcagccgcgccacttctgcaagagctgccgccggtactggaccaagggcggcgtcctccg 367 Query: 358 caacgtccccgtcgggggcggctgccgcaagcccaagcg 396 ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 368 caacgtccccgtcggcggcggctgccgcaaggccaagcg 406
>ref|NM_190742.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 963 Score = 202 bits (102), Expect = 8e-49 Identities = 138/150 (92%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 79 tgcccgcgctgcgactcgcccaacaccaagttctgctactacaacaactacagcctcagc 138 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 139 cagccgcgctacttctgcaagggatgccgccggtactggaccaagggcggctcgctccgc 198 Query: 359 aacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 199 aacgtccccgtcggcggcggctgccgcaag 228
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 202 bits (102), Expect = 8e-49 Identities = 138/150 (92%) Strand = Plus / Minus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 37466549 tgcccgcgctgcgactcgcccaacaccaagttctgctactacaacaactacagcctcagc 37466490 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 37466489 cagccgcgctacttctgcaagggatgccgccggtactggaccaagggcggctcgctccgc 37466430 Query: 359 aacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 37466429 aacgtccccgtcggcggcggctgccgcaag 37466400 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| | Sbjct: 5013701 gtgcccgaggtgcgagtccaccaacaccaagttctgctactacaacaactacaacctggc 5013760 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||||||||||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 5013761 gcagccgcgccacttctgcaaggcgtgccgccgctactggacgcgcggcggcgcgctccg 5013820 Query: 358 caacgtccccgtcgggggcggc 379 ||||||||||||||| |||||| Sbjct: 5013821 caacgtccccgtcggcggcggc 5013842 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| Sbjct: 31844415 acaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaagg 31844356 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| ||| |||||||| |||||| |||||||||||||||||||| | |||| Sbjct: 31844355 cctgccaccgctactggacggccggcggcgcgctccgcaacgtccccgtcggcgccggcc 31844296 Query: 381 gccgcaag 388 |||||||| Sbjct: 31844295 gccgcaag 31844288 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgc 316 |||||||||||||||| ||||||||||||| | ||||||||||||| ||||| Sbjct: 27670038 accaagttctgctacttcaacaactacaacgtgcggcagccgcgccacctctgc 27670091 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaa 291 ||||||||||||| |||||||||||| Sbjct: 9735521 aagttctgctacttcaacaactacaa 9735546 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 agccgccgcctcctcctcgg 419 |||||||||||||||||||| Sbjct: 9454407 agccgccgcctcctcctcgg 9454388
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 202 bits (102), Expect = 8e-49 Identities = 138/150 (92%) Strand = Plus / Minus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 61086 tgcccgcgctgcgactcgcccaacaccaagttctgctactacaacaactacagcctcagc 61027 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 61026 cagccgcgctacttctgcaagggatgccgccggtactggaccaagggcggctcgctccgc 60967 Query: 359 aacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 60966 aacgtccccgtcggcggcggctgccgcaag 60937
>ref|XM_469889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1415 Score = 200 bits (101), Expect = 3e-48 Identities = 143/157 (91%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 206 tgcggtgcccgcggtgcaactcgtcgaacaccaagttctgctactacaacaactacaacc 265 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 || | ||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 266 tcacccagccgcgccacttctgcaagacgtgccgccggtactggaccaagggcggcgcgc 325 Query: 354 tccgcaacgtccccgtcgggggcggctgccgcaagcc 390 |||||||||||||| |||| ||||| ||||||||||| Sbjct: 326 tccgcaacgtccccatcggcggcgggtgccgcaagcc 362
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 200 bits (101), Expect = 3e-48 Identities = 143/157 (91%) Strand = Plus / Minus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 31359647 tgcggtgcccgcggtgcaactcgtcgaacaccaagttctgctactacaacaactacaacc 31359588 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 || | ||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 31359587 tcacccagccgcgccacttctgcaagacgtgccgccggtactggaccaagggcggcgcgc 31359528 Query: 354 tccgcaacgtccccgtcgggggcggctgccgcaagcc 390 |||||||||||||| |||| ||||| ||||||||||| Sbjct: 31359527 tccgcaacgtccccatcggcggcgggtgccgcaagcc 31359491 Score = 182 bits (92), Expect = 8e-43 Identities = 146/164 (89%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct: 21407693 tgcggtgcccgcggtgcgactcgccgaacaccaagttctgctactacaacaactacagcc 21407752 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 || ||||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct: 21407753 tcagccagccgcgccacttctgcaagacgtgccggaggtactggaccaagggcggcgcgc 21407812 Query: 354 tccgcaacgtccccgtcgggggcggctgccgcaagcccaagcga 397 ||||||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 21407813 tccgcaacgtcccagtcggcggcggctgccgcaagaacaagcga 21407856 Score = 143 bits (72), Expect = 7e-31 Identities = 129/148 (87%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 9332613 gtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctctc 9332554 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| ||||||||||||||| ||||||||| |||||||| |||||| ||||| Sbjct: 9332553 ccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggctcgctccg 9332494 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||| |||||| Sbjct: 9332493 caacgtccccgtcggcggcgggtgccgc 9332466 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| ||||| || ||||||||||||||||||||| |||||||||| ||||| Sbjct: 34151828 gtgcccgcgctgcgagtccaccaacaccaagttctgctacttcaacaactactcgctctc 34151887 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 34151888 gcagccgcgccacttctgcaagacgtgccgccgctactggacgcgcggcggagcgctccg 34151947 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||| |||||| Sbjct: 34151948 caacgtccccgtcggcggcgggtgccgc 34151975 Score = 109 bits (55), Expect = 9e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| ||| | |||||||||||||||||||||||||||||||| || Sbjct: 23283169 gtgcccgcggtgcgcgtcgcacgacaccaagttctgctactacaacaactacaacacgtc 23283110 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||||||||||||| | ||||||||| |||||||| |||||| |||||| Sbjct: 23283109 gcagccgcgccacttctgccgcgcctgccgccgctactggacgctcggcggctccctccg 23283050 Query: 358 caacgtccccgtcgg 372 |||||||||| |||| Sbjct: 23283049 caacgtccccatcgg 23283035 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 3722019 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 3722077 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 280 caacaactacaacctctcgcagccgcg 306 |||||||||| |||||||||||||||| Sbjct: 8324254 caacaactaccacctctcgcagccgcg 8324280
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 200 bits (101), Expect = 3e-48 Identities = 143/157 (91%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 136153 tgcggtgcccgcggtgcaactcgtcgaacaccaagttctgctactacaacaactacaacc 136212 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 || | ||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 136213 tcacccagccgcgccacttctgcaagacgtgccgccggtactggaccaagggcggcgcgc 136272 Query: 354 tccgcaacgtccccgtcgggggcggctgccgcaagcc 390 |||||||||||||| |||| ||||| ||||||||||| Sbjct: 136273 tccgcaacgtccccatcggcggcgggtgccgcaagcc 136309
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 200 bits (101), Expect = 3e-48 Identities = 143/157 (91%) Strand = Plus / Minus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 31450163 tgcggtgcccgcggtgcaactcgtcgaacaccaagttctgctactacaacaactacaacc 31450104 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 || | ||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 31450103 tcacccagccgcgccacttctgcaagacgtgccgccggtactggaccaagggcggcgcgc 31450044 Query: 354 tccgcaacgtccccgtcgggggcggctgccgcaagcc 390 |||||||||||||| |||| ||||| ||||||||||| Sbjct: 31450043 tccgcaacgtccccatcggcggcgggtgccgcaagcc 31450007 Score = 182 bits (92), Expect = 8e-43 Identities = 146/164 (89%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct: 21400722 tgcggtgcccgcggtgcgactcgccgaacaccaagttctgctactacaacaactacagcc 21400781 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 || ||||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct: 21400782 tcagccagccgcgccacttctgcaagacgtgccggaggtactggaccaagggcggcgcgc 21400841 Query: 354 tccgcaacgtccccgtcgggggcggctgccgcaagcccaagcga 397 ||||||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 21400842 tccgcaacgtcccagtcggcggcggctgccgcaagaacaagcga 21400885 Score = 143 bits (72), Expect = 7e-31 Identities = 129/148 (87%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 9330508 gtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctctc 9330449 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| ||||||||||||||| ||||||||| |||||||| |||||| ||||| Sbjct: 9330448 ccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggctcgctccg 9330389 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||| |||||| Sbjct: 9330388 caacgtccccgtcggcggcgggtgccgc 9330361 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| ||||| || ||||||||||||||||||||| |||||||||| ||||| Sbjct: 34242300 gtgcccgcgctgcgagtccaccaacaccaagttctgctacttcaacaactactcgctctc 34242359 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 34242360 gcagccgcgccacttctgcaagacgtgccgccgctactggacgcgcggcggagcgctccg 34242419 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||| |||||| Sbjct: 34242420 caacgtccccgtcggcggcgggtgccgc 34242447 Score = 109 bits (55), Expect = 9e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| ||| | |||||||||||||||||||||||||||||||| || Sbjct: 23276197 gtgcccgcggtgcgcgtcgcacgacaccaagttctgctactacaacaactacaacacgtc 23276138 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||||||||||||| | ||||||||| |||||||| |||||| |||||| Sbjct: 23276137 gcagccgcgccacttctgccgcgcctgccgccgctactggacgctcggcggctccctccg 23276078 Query: 358 caacgtccccgtcgg 372 |||||||||| |||| Sbjct: 23276077 caacgtccccatcgg 23276063 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 3722130 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 3722188 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 280 caacaactacaacctctcgcagccgcg 306 |||||||||| |||||||||||||||| Sbjct: 8322089 caacaactaccacctctcgcagccgcg 8322115
>emb|AJ312331.1|HVU312331 Hordeum vulgare partial dof172 gene for dof zinc finger protein, exon 1 Length = 534 Score = 200 bits (101), Expect = 3e-48 Identities = 143/157 (91%) Strand = Plus / Plus Query: 232 ggtgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaa 291 |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 87 ggtgaggtgcccgcgctgcgactcgcccaacaccaagttctgctactacaacaactacag 146 Query: 292 cctctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcct 351 ||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 147 cctgtcgcagccgcgccacttctgcaagacatgccggcggtactggaccaagggcggcgc 206 Query: 352 cctccgcaacgtccccgtcgggggcggctgccgcaag 388 ||||||| |||||||||||| ||||||||||||||| Sbjct: 207 gctccgcagcgtccccgtcggcggcggctgccgcaag 243
>dbj|AK063380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-F11, full insert sequence Length = 1626 Score = 200 bits (101), Expect = 3e-48 Identities = 143/157 (91%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 388 tgcggtgcccgcggtgcaactcgtcgaacaccaagttctgctactacaacaactacaacc 447 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 || | ||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 448 tcacccagccgcgccacttctgcaagacgtgccgccggtactggaccaagggcggcgcgc 507 Query: 354 tccgcaacgtccccgtcgggggcggctgccgcaagcc 390 |||||||||||||| |||| ||||| ||||||||||| Sbjct: 508 tccgcaacgtccccatcggcggcgggtgccgcaagcc 544
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 182 bits (92), Expect = 8e-43 Identities = 146/164 (89%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct: 100604 tgcggtgcccgcggtgcgactcgccgaacaccaagttctgctactacaacaactacagcc 100663 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 || ||||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct: 100664 tcagccagccgcgccacttctgcaagacgtgccggaggtactggaccaagggcggcgcgc 100723 Query: 354 tccgcaacgtccccgtcgggggcggctgccgcaagcccaagcga 397 ||||||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 100724 tccgcaacgtcccagtcggcggcggctgccgcaagaacaagcga 100767
>gb|AF542507.1| Oryza sativa Dof-like protein 34 mRNA, partial cds Length = 1134 Score = 180 bits (91), Expect = 3e-42 Identities = 136/151 (90%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 135 gtgcccgcggtgcgagtcgacgcacaccaagttctgctactacaacaactacagcctctc 194 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 195 gcagccgcgctacttctgcaagacgtgccgccgctactggaccaagggcggctcgctccg 254 Query: 358 caacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 255 gaacgtccccgtcggcggcggctgccgcaag 285
>ref|XM_467389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 172 bits (87), Expect = 8e-40 Identities = 135/151 (89%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 159 gtgcccgcggtgcgagtcgacgcacaccaagttctgctactacaataactacagcctctc 218 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 219 gcagccgcgctacttctgcaagacgtgccgccgctactggaccaagggcggctcgctccg 278 Query: 358 caacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 279 gaacgtccccgtcggcggcggctgccgcaag 309
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 172 bits (87), Expect = 8e-40 Identities = 135/151 (89%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 105003 gtgcccgcggtgcgagtcgacgcacaccaagttctgctactacaataactacagcctctc 105062 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 105063 gcagccgcgctacttctgcaagacgtgccgccgctactggaccaagggcggctcgctccg 105122 Query: 358 caacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 105123 gaacgtccccgtcggcggcggctgccgcaag 105153
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 172 bits (87), Expect = 8e-40 Identities = 135/151 (89%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 54973 gtgcccgcggtgcgagtcgacgcacaccaagttctgctactacaataactacagcctctc 54914 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 54913 gcagccgcgctacttctgcaagacgtgccgccgctactggaccaagggcggctcgctccg 54854 Query: 358 caacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 54853 gaacgtccccgtcggcggcggctgccgcaag 54823
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 172 bits (87), Expect = 8e-40 Identities = 135/151 (89%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| | |||||||||||||||||||||| ||||||| |||||| Sbjct: 147596 gtgcccgcggtgcgagtcgacgcacaccaagttctgctactacaataactacagcctctc 147537 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 147536 gcagccgcgctacttctgcaagacgtgccgccgctactggaccaagggcggctcgctccg 147477 Query: 358 caacgtccccgtcgggggcggctgccgcaag 388 |||||||||||||| ||||||||||||||| Sbjct: 147476 gaacgtccccgtcggcggcggctgccgcaag 147446
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 170 bits (86), Expect = 3e-39 Identities = 134/150 (89%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 3608 tgcccgcggtgcgagtcgcccaacaccaagttctgctactacaacaactacagcctcagc 3667 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 3668 cagccgcgctacttctgcaaggggtgccgccgctactggaccaagggcggctcgctccgg 3727 Query: 359 aacgtccccgtcgggggcggctgccgcaag 388 ||||| |||||||| ||||| ||||||||| Sbjct: 3728 aacgtgcccgtcggcggcgggtgccgcaag 3757
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 170 bits (86), Expect = 3e-39 Identities = 134/150 (89%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 21410525 tgcccgcggtgcgagtcgcccaacaccaagttctgctactacaacaactacagcctcagc 21410584 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct: 21410585 cagccgcgctacttctgcaaggggtgccgccgctactggaccaagggcggctcgctccgg 21410644 Query: 359 aacgtccccgtcgggggcggctgccgcaag 388 ||||| |||||||| ||||| ||||||||| Sbjct: 21410645 aacgtgcccgtcggcggcgggtgccgcaag 21410674 Score = 127 bits (64), Expect = 4e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 628009 gtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctctc 627950 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| |||||||||||| | ||||||||| ||||||||| |||||| ||||| Sbjct: 627949 ccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctccg 627890 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||||| |||| Sbjct: 627889 caacgtccccgtcggcggcggctaccgc 627862 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 accacctccgctgcctcgtcc 517 ||||||||||||||||||||| Sbjct: 28570799 accacctccgctgcctcgtcc 28570819
>gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter region and complete cds Length = 12502 Score = 167 bits (84), Expect = 5e-38 Identities = 117/128 (91%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 9115 acaccaagttctgctactacaacaactacaacacctcccagccgcgccacttctgcaagg 9174 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 |||||||||| |||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 9175 gctgccgccgctactggaccaagggcggcacgctgcgcaacgtccccgtcggcggcggca 9234 Query: 381 gccgcaag 388 ||||||| Sbjct: 9235 cccgcaag 9242
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 165 bits (83), Expect = 2e-37 Identities = 134/151 (88%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||| || Sbjct: 18180449 gtgcccgcggtgcgagtcgcgggacaccaagttctgctactacaacaactacaacacgtc 18180508 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||| Sbjct: 18180509 gcagccgcggcacttctgcaagtcgtgccgccgctactggaccaagggcggctccctccg 18180568 Query: 358 caacgtccccgtcgggggcggctgccgcaag 388 ||||||||||||||| ||||||| ||||||| Sbjct: 18180569 caacgtccccgtcggcggcggctcccgcaag 18180599
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 165 bits (83), Expect = 2e-37 Identities = 134/151 (88%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| |||||||||||||||||||||||||||||||| || Sbjct: 29173 gtgcccgcggtgcgagtcgcgggacaccaagttctgctactacaacaactacaacacgtc 29232 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||| Sbjct: 29233 gcagccgcggcacttctgcaagtcgtgccgccgctactggaccaagggcggctccctccg 29292 Query: 358 caacgtccccgtcgggggcggctgccgcaag 388 ||||||||||||||| ||||||| ||||||| Sbjct: 29293 caacgtccccgtcggcggcggctcccgcaag 29323
>emb|X66076.1|ZMMNB1A Z.mays MNB1a mRNA for DNA-binding protein Length = 1225 Score = 159 bits (80), Expect = 1e-35 Identities = 116/128 (90%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 253 acaccaagttctgctactacaacaactacaacacctcccagccgcgccacttctgcaagg 312 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 |||||||||| |||||||||||||| ||| || ||||||||||||||||| |||||| Sbjct: 313 gctgccgccgctactggaccaagggtggcacgctgcgcaacgtccccgtcggcggcggca 372 Query: 381 gccgcaag 388 ||||||| Sbjct: 373 cccgcaag 380
>emb|X79934.1|ZMDOF2 Z.mays Dof2 mRNA Length = 1037 Score = 151 bits (76), Expect = 3e-33 Identities = 115/128 (89%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 82 acaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttgtgcaagt 141 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142 cgtgccgccgctactggaccaagggcgggtccctccgcaacgtccccgtcgggggcggca 201 Query: 381 gccgcaag 388 ||||||| Sbjct: 202 cccgcaag 209
>ref|NM_189690.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| | Sbjct: 93 gtgcccgaggtgcgagtccaccaacaccaagttctgctactacaacaactacaacctggc 152 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||||||||||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 153 gcagccgcgccacttctgcaaggcgtgccgccgctactggacgcgcggcggcgcgctccg 212 Query: 358 caacgtccccgtcgggggcggc 379 ||||||||||||||| |||||| Sbjct: 213 caacgtccccgtcggcggcggc 234
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| | Sbjct: 7139 gtgcccgaggtgcgagtccaccaacaccaagttctgctactacaacaactacaacctggc 7198 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||||||||||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 7199 gcagccgcgccacttctgcaaggcgtgccgccgctactggacgcgcggcggcgcgctccg 7258 Query: 358 caacgtccccgtcgggggcggc 379 ||||||||||||||| |||||| Sbjct: 7259 caacgtccccgtcggcggcggc 7280
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 47338 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 47279 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 47278 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgc 47219 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 47218 aacgtccccgtcggcggcggct 47197
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| | Sbjct: 114154 gtgcccgaggtgcgagtccaccaacaccaagttctgctactacaacaactacaacctggc 114213 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||||||||||||||||| |||||||| |||||||| |||||| ||||| Sbjct: 114214 gcagccgcgccacttctgcaaggcgtgccgccgctactggacgcgcggcggcgcgctccg 114273 Query: 358 caacgtccccgtcgggggcggc 379 ||||||||||||||| |||||| Sbjct: 114274 caacgtccccgtcggcggcggc 114295
>dbj|AK120810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F11, full insert sequence Length = 1744 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 340 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 399 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 400 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgc 459 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 460 aacgtccccgtcggcggcggct 481
>dbj|AB028130.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1550 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 468 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 527 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 528 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggctcgctccgc 587 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 588 aacgtccccgtcggcggcggct 609
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 143 bits (72), Expect = 7e-31 Identities = 129/148 (87%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 30013 gtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctctc 29954 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| ||||||||||||||| ||||||||| |||||||| |||||| ||||| Sbjct: 29953 ccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggctcgctccg 29894 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||| |||||| Sbjct: 29893 caacgtccccgtcggcggcgggtgccgc 29866
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 143 bits (72), Expect = 7e-31 Identities = 129/148 (87%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 23578 gtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctctc 23637 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| ||||||||||||||| ||||||||| |||||||| |||||| ||||| Sbjct: 23638 ccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggctcgctccg 23697 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||| |||||| Sbjct: 23698 caacgtccccgtcggcggcgggtgccgc 23725
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 143 bits (72), Expect = 7e-31 Identities = 132/152 (86%) Strand = Plus / Minus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||| | Sbjct: 8912 tgcggtgcccgcgctgcgactcgacgaacaccaagttctgctacttcaacaactactcgc 8853 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 | ||||||||||||||||||||||||| |||||||| |||||||| |||||| | Sbjct: 8852 tgtcgcagccgcgccacttctgcaaggcttgccgccgctactggacgcgcggcggcgcgc 8793 Query: 354 tccgcaacgtccccgtcgggggcggctgccgc 385 ||||||||||||||||||| ||||| |||||| Sbjct: 8792 tccgcaacgtccccgtcggcggcgggtgccgc 8761
>ref|XM_473536.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 184 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 243 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| ||||| || |||||||| |||||||| |||||| Sbjct: 244 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 303 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 304 aacgtccccgtcggcggcggct 325
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 212 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 153 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| ||||| || |||||||| |||||||| |||||| Sbjct: 152 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 93 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 92 aacgtccccgtcggcggcggct 71
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 158097 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 158038 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| ||||| || |||||||| |||||||| |||||| Sbjct: 158037 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 157978 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 157977 aacgtccccgtcggcggcggct 157956
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 28509422 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 28509363 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| ||||| || |||||||| |||||||| |||||| Sbjct: 28509362 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 28509303 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 28509302 aacgtccccgtcggcggcggct 28509281 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 34691238 ccaacaccaagttctgctactacaacaactacagcacgtcgcagccgcgccacttctgcc 34691179 Query: 318 agggctgccgccggtactggac 339 | ||||||||| |||||||| Sbjct: 34691178 gcgcctgccgccgctactggac 34691157
>emb|AJ312297.1|HVU312297 Hordeum vulgare sed gene for dof zinc finger protein, exons 1-2 Length = 4727 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 3662 tgcccgaggtgcaactctaccaacaccaagttctgctactacaacaactacagcctccag 3721 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 3722 cagccgcgctacttctgcaagacgtgccgccgctactggaccgagggcggctcgctccgc 3781 Query: 359 aacgtccccgtcgggggcggct 380 ||||| |||||||| ||||||| Sbjct: 3782 aacgtgcccgtcggcggcggct 3803
>emb|AJ276357.1|HVU276357 Hordeum vulgare mRNA for dof zinc finger protein (sed gene) Length = 1555 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 457 tgcccgaggtgcaactctaccaacaccaagttctgctactacaacaactacagcctccag 516 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 517 cagccgcgctacttctgcaagacgtgccgccgctactggaccgagggcggctcgctccgc 576 Query: 359 aacgtccccgtcgggggcggct 380 ||||| |||||||| ||||||| Sbjct: 577 aacgtgcccgtcggcggcggct 598
>emb|AJ000991.1|HVBPBF Hordeum vulgare mRNA for DNA binding protein BPBF Length = 1318 Score = 139 bits (70), Expect = 1e-29 Identities = 118/134 (88%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||||||||||||||||||||||||||||| | | || ||||||||| ||||||||||| Sbjct: 163 aacaccaagttctgctactacaacaactacagcatgtcccagccgcgctacttctgcaag 222 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggc 379 | ||||||||| ||||||||| | || ||| |||||||||||||||| |||| || || Sbjct: 223 gcctgccgccgctactggacccatggtggctccctccgcaacgtccccatcggtggtggt 282 Query: 380 tgccgcaagcccaa 393 |||||||||||||| Sbjct: 283 tgccgcaagcccaa 296
>dbj|AK060659.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A11, full insert sequence Length = 1556 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 321 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 380 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| ||||| || |||||||| |||||||| |||||| Sbjct: 381 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 440 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 441 aacgtccccgtcggcggcggct 462
>dbj|AB028129.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 2316 Score = 139 bits (70), Expect = 1e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 239 tgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcg 298 |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| | Sbjct: 458 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 517 Query: 299 cagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgc 358 ||||||||| ||||||||||| ||||| || |||||||| |||||||| |||||| Sbjct: 518 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 577 Query: 359 aacgtccccgtcgggggcggct 380 |||||||||||||| ||||||| Sbjct: 578 aacgtccccgtcggcggcggct 599
>ref|XM_477205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1534 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 242 ccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcgcag 301 ||||| |||||||| ||||||||||||||||||||| |||||||||| |||| | ||| Sbjct: 239 ccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctcacccag 298 Query: 302 ccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgcaac 361 || |||||||||||||||| |||||||| ||||||||| |||||| |||||||||| Sbjct: 299 ccccgccacttctgcaaggcttgccgccgctactggacccgcggcggcgccctccgcaac 358 Query: 362 gtccccgtcgggggcggctgccgc 385 ||||||||||| ||||||| |||| Sbjct: 359 gtccccgtcggcggcggcttccgc 382
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 135 bits (68), Expect = 2e-28 Identities = 132/152 (86%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||| | Sbjct: 23493248 tgcggtgcccgcgctgcgactcgacgaacaccaagttctgctacttcaacaactactcgc 23493307 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 | ||||||||||||||||||||||||| |||||||| |||||||| ||||| | | Sbjct: 23493308 tgtcgcagccgcgccacttctgcaaggcttgccgccgctactggacgcgcggcgg-cgcg 23493366 Query: 354 tccgcaacgtccccgtcgggggcggctgccgc 385 ||||||||||||||||||| ||||| |||||| Sbjct: 23493367 tccgcaacgtccccgtcggcggcgggtgccgc 23493398 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||||||||||||||||| |||||||||| ||||||||| | Sbjct: 24758036 acaccaagttctgctactacaacaactacaacacggcgcagccgcggcacttctgccgcg 24757977 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||||||||| |||||||| |||||| |||||||||||||||| |||| Sbjct: 24757976 cctgccgccgctactggacgctcggcggctccctccgcaacgtccccatcgg 24757925 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 gccgccgcctcctcctcggac 421 ||||||||||||||||||||| Sbjct: 259900 gccgccgcctcctcctcggac 259920
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 242 ccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcgcag 301 ||||| |||||||| ||||||||||||||||||||| |||||||||| |||| | ||| Sbjct: 7637558 ccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctcacccag 7637499 Query: 302 ccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgcaac 361 || |||||||||||||||| |||||||| ||||||||| |||||| |||||||||| Sbjct: 7637498 ccccgccacttctgcaaggcttgccgccgctactggacccgcggcggcgccctccgcaac 7637439 Query: 362 gtccccgtcgggggcggctgccgc 385 ||||||||||| ||||||| |||| Sbjct: 7637438 gtccccgtcggcggcggcttccgc 7637415 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 19309171 tgcggtgcccgcggtgcgactcggcgaacaccaagttctgctactacaacaactactcgc 19309230 Query: 294 tctcgcagccgcgccacttctgcaagg 320 | ||||||||||| ||||||||||||| Sbjct: 19309231 tgtcgcagccgcggcacttctgcaagg 19309257 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 266 aagttctgctactacaacaactacaac 292 ||||||||||||||||||||||||||| Sbjct: 29025055 aagttctgctactacaacaactacaac 29025029
>dbj|AB087851.1| Pisum sativum PsDof6 mRNA for DNA binding with one finger 6 protein, complete cds Length = 871 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 151 aacacaaagttctgctactacaacaactacaacctctctcagcctcgccatttctgtaaa 210 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggc 379 ||||||||| ||||||||||| |||||| ||||||| |||||||||||||| ||||| Sbjct: 211 aactgccgccgttactggaccaaaggcggcgtcctccgtaacgtccccgtcggcggcggt 270 Query: 380 tgccgcaa 387 | |||||| Sbjct: 271 tcccgcaa 278
>dbj|AK068542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H18, full insert sequence Length = 1534 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 242 ccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcgcag 301 ||||| |||||||| ||||||||||||||||||||| |||||||||| |||| | ||| Sbjct: 239 ccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctcacccag 298 Query: 302 ccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgcaac 361 || |||||||||||||||| |||||||| ||||||||| |||||| |||||||||| Sbjct: 299 ccccgccacttctgcaaggcttgccgccgctactggacccgcggcggcgccctccgcaac 358 Query: 362 gtccccgtcgggggcggctgccgc 385 ||||||||||| ||||||| |||| Sbjct: 359 gtccccgtcggcggcggcttccgc 382
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 135 bits (68), Expect = 2e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 242 ccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctcgcag 301 ||||| |||||||| ||||||||||||||||||||| |||||||||| |||| | ||| Sbjct: 142968 ccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctcacccag 142909 Query: 302 ccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgcaac 361 || |||||||||||||||| |||||||| ||||||||| |||||| |||||||||| Sbjct: 142908 ccccgccacttctgcaaggcttgccgccgctactggacccgcggcggcgccctccgcaac 142849 Query: 362 gtccccgtcgggggcggctgccgc 385 ||||||||||| ||||||| |||| Sbjct: 142848 gtccccgtcggcggcggcttccgc 142825
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 135 bits (68), Expect = 2e-28 Identities = 132/152 (86%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||| | Sbjct: 23421439 tgcggtgcccgcgctgcgactcgacgaacaccaagttctgctacttcaacaactactcgc 23421498 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 | ||||||||||||||||||||||||| |||||||| |||||||| ||||| | | Sbjct: 23421499 tgtcgcagccgcgccacttctgcaaggcttgccgccgctactggacgcgcggcgg-cgcg 23421557 Query: 354 tccgcaacgtccccgtcgggggcggctgccgc 385 ||||||||||||||||||| ||||| |||||| Sbjct: 23421558 tccgcaacgtccccgtcggcggcgggtgccgc 23421589 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||||||||||||||||| |||||||||| ||||||||| | Sbjct: 24686242 acaccaagttctgctactacaacaactacaacacggcgcagccgcggcacttctgccgcg 24686183 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||||||||| |||||||| |||||| |||||||||||||||| |||| Sbjct: 24686182 cctgccgccgctactggacgctcggcggctccctccgcaacgtccccatcgg 24686131 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 gccgccgcctcctcctcggac 421 ||||||||||||||||||||| Sbjct: 259900 gccgccgcctcctcctcggac 259920
>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69273 Score = 135 bits (68), Expect = 2e-28 Identities = 132/152 (86%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||| | Sbjct: 13796 tgcggtgcccgcgctgcgactcgacgaacaccaagttctgctacttcaacaactactcgc 13855 Query: 294 tctcgcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcc 353 | ||||||||||||||||||||||||| |||||||| |||||||| ||||| | | Sbjct: 13856 tgtcgcagccgcgccacttctgcaaggcttgccgccgctactggacgcgcggcgg-cgcg 13914 Query: 354 tccgcaacgtccccgtcgggggcggctgccgc 385 ||||||||||||||||||| ||||| |||||| Sbjct: 13915 tccgcaacgtccccgtcggcggcgggtgccgc 13946
>ref|XM_483086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 186 gtgcccgcggtgcgagtcgcgggacaccaaattctgctactacaacaactacaacacctc 245 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| || |||||||||||| | |||||||| |||||||||||||| ||| ||||| Sbjct: 246 ccagccccggcacttctgcaagtgttgccgccgctactggaccaagggtggcacgctccg 305 Query: 358 caacgtccccgtcgggggcggc 379 ||||||||||||||| |||||| Sbjct: 306 caacgtccccgtcggcggcggc 327
>ref|XM_464857.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1537 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggc 322 |||||||||||||||||||||||||||| | | ||||||||||| |||||||| | Sbjct: 259 accaagttctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgag 318 Query: 323 tgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggctgc 382 |||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 319 tgccgccgctactggacccagggcggctccctccgcaacgtccccgtcggcggcggctgc 378 Query: 383 cgcaag 388 |||||| Sbjct: 379 cgcaag 384
>ref|NM_197162.1| Oryza sativa (japonica cultivar-group) putative zinc finger protein (OSJNBa0066I08.3), mRNA Length = 2010 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || | | Sbjct: 1131 gtgcccgcggtgcggctcggcgaacaccaagttctgctactacaacaactacagccgcac 1190 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||| || ||||||||| |||||||| ||||||| |||||||| ||||| Sbjct: 1191 gcagccgcggtacctctgcaaggcgtgccgccgccactggacggagggcggcacgctccg 1250 Query: 358 caacgtccccgtcgggggcggc 379 | ||||||||||||| |||||| Sbjct: 1251 cgacgtccccgtcggcggcggc 1272
>gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete sequence Length = 25375 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || | | Sbjct: 8926 gtgcccgcggtgcggctcggcgaacaccaagttctgctactacaacaactacagccgcac 8867 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||| || ||||||||| |||||||| ||||||| |||||||| ||||| Sbjct: 8866 gcagccgcggtacctctgcaaggcgtgccgccgccactggacggagggcggcacgctccg 8807 Query: 358 caacgtccccgtcgggggcggc 379 | ||||||||||||| |||||| Sbjct: 8806 cgacgtccccgtcggcggcggc 8785
>emb|AJ012284.1|TAE012284 Triticum aestivum mRNA for DNA binding protein PBF, partial Length = 993 Score = 131 bits (66), Expect = 3e-27 Identities = 120/138 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||||||||||||||||||||||||||| | | || ||||| ||| |||||||||| Sbjct: 132 caacaccaagttctgctactacaacaactatagtatgtctcagccccgctacttctgcaa 191 Query: 319 gggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcgg 378 || ||||||||| ||||||||| | || ||| |||||||||||||||| |||| || || Sbjct: 192 ggcctgccgccgctactggacccatggtggctccctccgcaacgtccccatcggtggtgg 251 Query: 379 ctgccgcaagcccaagcg 396 |||||||||||||||||| Sbjct: 252 ctgccgcaagcccaagcg 269
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || | | Sbjct: 18358335 gtgcccgcggtgcggctcggcgaacaccaagttctgctactacaacaactacagccgcac 18358276 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||| || ||||||||| |||||||| ||||||| |||||||| ||||| Sbjct: 18358275 gcagccgcggtacctctgcaaggcgtgccgccgccactggacggagggcggcacgctccg 18358216 Query: 358 caacgtccccgtcgggggcggc 379 | ||||||||||||| |||||| Sbjct: 18358215 cgacgtccccgtcggcggcggc 18358194 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||| Sbjct: 13368582 acaccaagttctgctacttcaacaactacaacgtcaaccagcctcgccacttctgcaagc 13368523 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| || ||||||||| |||||| | | ||||||||||||||||| | |||| Sbjct: 13368522 actgccagcgctactggaccgccggcggcgccatgcgcaacgtccccgtcggcgccggcc 13368463 Query: 381 gccgcaag 388 |||||||| Sbjct: 13368462 gccgcaag 13368455
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 24225777 gtgcccgcggtgcgagtcgcgggacaccaaattctgctactacaacaactacaacacctc 24225836 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| || |||||||||||| | |||||||| |||||||||||||| ||| ||||| Sbjct: 24225837 ccagccccggcacttctgcaagtgttgccgccgctactggaccaagggtggcacgctccg 24225896 Query: 358 caacgtccccgtcgggggcggc 379 ||||||||||||||| |||||| Sbjct: 24225897 caacgtccccgtcggcggcggc 24225918
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggc 322 |||||||||||||||||||||||||||| | | ||||||||||| |||||||| | Sbjct: 60018 accaagttctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgag 59959 Query: 323 tgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggctgc 382 |||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 59958 tgccgccgctactggacccagggcggctccctccgcaacgtccccgtcggcggcggctgc 59899 Query: 383 cgcaag 388 |||||| Sbjct: 59898 cgcaag 59893
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||| Sbjct: 92116 gtgcccgcggtgcgagtcgcgggacaccaaattctgctactacaacaactacaacacctc 92175 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| || |||||||||||| | |||||||| |||||||||||||| ||| ||||| Sbjct: 92176 ccagccccggcacttctgcaagtgttgccgccgctactggaccaagggtggcacgctccg 92235 Query: 358 caacgtccccgtcgggggcggc 379 ||||||||||||||| |||||| Sbjct: 92236 caacgtccccgtcggcggcggc 92257
>emb|AJ312327.1|HVU312327 Hordeum vulgare dof155 gene for dof zinc finger protein Length = 986 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| Sbjct: 168 gtgcccgcggtgcgactccaccaacaccaaattctgctactacaacaactactccctctc 227 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggac 339 |||||| |||||||||||||||| |||||||| |||||||| Sbjct: 228 gcagccccgccacttctgcaaggcatgccgccgctactggac 269
>dbj|AK109091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A04, full insert sequence Length = 1381 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || | | Sbjct: 620 gtgcccgcggtgcggctcggcgaacaccaagttctgctactacaacaactacagccgcac 679 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||| || ||||||||| |||||||| ||||||| |||||||| ||||| Sbjct: 680 gcagccgcggtacctctgcaaggcgtgccgccgccactggacggagggcggcacgctccg 739 Query: 358 caacgtccccgtcgggggcggc 379 | ||||||||||||| |||||| Sbjct: 740 cgacgtccccgtcggcggcggc 761
>dbj|AK107294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C02, full insert sequence Length = 1537 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggc 322 |||||||||||||||||||||||||||| | | ||||||||||| |||||||| | Sbjct: 259 accaagttctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgag 318 Query: 323 tgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggctgc 382 |||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 319 tgccgccgctactggacccagggcggctccctccgcaacgtccccgtcggcggcggctgc 378 Query: 383 cgcaag 388 |||||| Sbjct: 379 cgcaag 384
>dbj|AK070563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H13, full insert sequence Length = 1406 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || | | Sbjct: 621 gtgcccgcggtgcggctcggcgaacaccaagttctgctactacaacaactacagccgcac 680 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||| || ||||||||| |||||||| ||||||| |||||||| ||||| Sbjct: 681 gcagccgcggtacctctgcaaggcgtgccgccgccactggacggagggcggcacgctccg 740 Query: 358 caacgtccccgtcgggggcggc 379 | ||||||||||||| |||||| Sbjct: 741 cgacgtccccgtcggcggcggc 762
>gb|AY496057.2| Triticum aestivum Dof DNA-binding protein mRNA, complete cds Length = 1279 Score = 131 bits (66), Expect = 3e-27 Identities = 120/138 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||||||||||||||||||||||||||| | | || ||||| ||| |||||||||| Sbjct: 175 caacaccaagttctgctactacaacaactatagtatgtctcagccccgctacttctgcaa 234 Query: 319 gggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcgg 378 || ||||||||| ||||||||| | || ||| |||||||||||||||| |||| || || Sbjct: 235 ggcctgccgccgctactggacccatggtggctccctccgcaacgtccccatcggtggtgg 294 Query: 379 ctgccgcaagcccaagcg 396 |||||||||||||||||| Sbjct: 295 ctgccgcaagcccaagcg 312
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || | | Sbjct: 18368388 gtgcccgcggtgcggctcggcgaacaccaagttctgctactacaacaactacagccgcac 18368329 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||| || ||||||||| |||||||| ||||||| |||||||| ||||| Sbjct: 18368328 gcagccgcggtacctctgcaaggcgtgccgccgccactggacggagggcggcacgctccg 18368269 Query: 358 caacgtccccgtcgggggcggc 379 | ||||||||||||| |||||| Sbjct: 18368268 cgacgtccccgtcggcggcggc 18368247 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||| Sbjct: 13375922 acaccaagttctgctacttcaacaactacaacgtcaaccagcctcgccacttctgcaagc 13375863 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| || ||||||||| |||||| | | ||||||||||||||||| | |||| Sbjct: 13375862 actgccagcgctactggaccgccggcggcgccatgcgcaacgtccccgtcggcgccggcc 13375803 Query: 381 gccgcaag 388 |||||||| Sbjct: 13375802 gccgcaag 13375795
>dbj|AB028131.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1572 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggc 322 |||||||||||||||||||||||||||| | | ||||||||||| |||||||| | Sbjct: 288 accaagttctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgag 347 Query: 323 tgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggctgc 382 |||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 348 tgccgccgctactggacccagggcggctccctccgcaacgtccccgtcggcggcggctgc 407 Query: 383 cgcaag 388 |||||| Sbjct: 408 cgcaag 413
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 127 bits (64), Expect = 4e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 145408 gtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctctc 145349 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| |||||||||||| | ||||||||| ||||||||| |||||| ||||| Sbjct: 145348 ccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctccg 145289 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||||| |||| Sbjct: 145288 caacgtccccgtcggcggcggctaccgc 145261
>dbj|AK108933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A09, full insert sequence Length = 1520 Score = 127 bits (64), Expect = 4e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||| Sbjct: 277 gtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctctc 336 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||| |||||||||||| | ||||||||| ||||||||| |||||| ||||| Sbjct: 337 ccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctccg 396 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||||| |||| Sbjct: 397 caacgtccccgtcggcggcggctaccgc 424
>ref|XM_478332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 146 tgcggtgcccgcggtgcgactcggcgaacaccaagttctgctactacaacaactactcgc 205 Query: 294 tctcgcagccgcgccacttctgcaagg 320 | ||||||||||| ||||||||||||| Sbjct: 206 tgtcgcagccgcggcacttctgcaagg 232
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1163_G04 Length = 106253 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 234 tgcggtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacc 293 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 85397 tgcggtgcccgcggtgcgactcggcgaacaccaagttctgctactacaacaactactcgc 85456 Query: 294 tctcgcagccgcgccacttctgcaagg 320 | ||||||||||| ||||||||||||| Sbjct: 85457 tgtcgcagccgcggcacttctgcaagg 85483
>ref|XM_470142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| ||||| || ||||||||||||||||||||| |||||||||| ||||| Sbjct: 180 gtgcccgcgctgcgagtccaccaacaccaagttctgctacttcaacaactactcgctctc 239 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 240 gcagccgcgccacttctgcaagacgtgccgccgctactggacgcgcggcggagcgctccg 299 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||| |||||| Sbjct: 300 caacgtccccgtcggcggcgggtgccgc 327
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| ||||| || ||||||||||||||||||||| |||||||||| ||||| Sbjct: 115640 gtgcccgcgctgcgagtccaccaacaccaagttctgctacttcaacaactactcgctctc 115699 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 115700 gcagccgcgccacttctgcaagacgtgccgccgctactggacgcgcggcggagcgctccg 115759 Query: 358 caacgtccccgtcgggggcggctgccgc 385 ||||||||||||||| ||||| |||||| Sbjct: 115760 caacgtccccgtcggcggcgggtgccgc 115787
>emb|X79935.1|ZMDOF3 Z.mays Dof3 mRNA Length = 1230 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||| | Sbjct: 100 gtgcccgcgctgcgactcaaccaacaccaagttctgctacttcaacaactactccctcac 159 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggac 339 ||||||||||||||||||| || ||||||||| |||||||| Sbjct: 160 gcagccgcgccacttctgccgggcctgccgccgctactggac 201
>ref|NM_191305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| Sbjct: 335 acaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaagg 394 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| ||| |||||||| |||||| |||||||||||||||||||| | |||| Sbjct: 395 cctgccaccgctactggacggccggcggcgcgctccgcaacgtccccgtcggcgccggcc 454 Query: 381 gccgcaag 388 |||||||| Sbjct: 455 gccgcaag 462
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| Sbjct: 30493 acaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaagg 30434 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| ||| |||||||| |||||| |||||||||||||||||||| | |||| Sbjct: 30433 cctgccaccgctactggacggccggcggcgcgctccgcaacgtccccgtcggcgccggcc 30374 Query: 381 gccgcaag 388 |||||||| Sbjct: 30373 gccgcaag 30366
>dbj|AK071083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076F14, full insert sequence Length = 1078 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| Sbjct: 462 acaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaagg 521 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| ||| |||||||| |||||| |||||||||||||||||||| | |||| Sbjct: 522 cctgccaccgctactggacggccggcggcgcgctccgcaacgtccccgtcggcgccggcc 581 Query: 381 gccgcaag 388 |||||||| Sbjct: 582 gccgcaag 589
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 109 bits (55), Expect = 9e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| ||| | |||||||||||||||||||||||||||||||| || Sbjct: 119650 gtgcccgcggtgcgcgtcgcacgacaccaagttctgctactacaacaactacaacacgtc 119591 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||||||||||||| | ||||||||| |||||||| |||||| |||||| Sbjct: 119590 gcagccgcgccacttctgccgcgcctgccgccgctactggacgctcggcggctccctccg 119531 Query: 358 caacgtccccgtcgg 372 |||||||||| |||| Sbjct: 119530 caacgtccccatcgg 119516
>dbj|AK119803.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-F03, full insert sequence Length = 965 Score = 109 bits (55), Expect = 9e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 |||||||||||||| ||| | |||||||||||||||||||||||||||||||| || Sbjct: 204 gtgcccgcggtgcgcgtcgcacgacaccaagttctgctactacaacaactacaacacgtc 263 Query: 298 gcagccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccg 357 ||||||||||||||||||| | ||||||||| |||||||| |||||| |||||| Sbjct: 264 gcagccgcgccacttctgccgcgcctgccgccgctactggacgctcggcggctccctccg 323 Query: 358 caacgtccccgtcgg 372 |||||||||| |||| Sbjct: 324 caacgtccccatcgg 338
>gb|AY111473.1| Zea mays CL830_1 mRNA sequence Length = 1414 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 186 ccaacacaaagttctgctactacaacaactacaacctgacgcagccgcgctacttctgca 245 Query: 318 agggctgccgccggtactggaccaagggcggcctcctccgcaacg 362 || |||||||| |||||||| | |||||| ||||||||||| Sbjct: 246 agacgtgccgccgctactggacacacggcggcaccctccgcaacg 290
>gb|AY111630.1| Zea mays CL2150_1 mRNA sequence Length = 1313 Score = 103 bits (52), Expect = 6e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 301 gccgcgccacttctgcaagggctgccgccggtactggaccaagggcggcctcctccgcaa 360 |||||||||||||||||||||||||||||| |||||||||||||| ||| || ||||| Sbjct: 293 gccgcgccacttctgcaagggctgccgccgctactggaccaagggtggcacgctgcgcaa 352 Query: 361 cgtccccgtcgggggcggctgccgcaag 388 |||||||||||| |||||| ||||||| Sbjct: 353 cgtccccgtcggcggcggcacccgcaag 380
>dbj|AB028133.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1174 Score = 103 bits (52), Expect = 6e-19 Identities = 110/128 (85%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| Sbjct: 540 acaccaagttctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaagg 599 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| ||| |||||||| ||||| | | ||||||||||||||||||| | |||| Sbjct: 600 cctgccaccgctactggacggccggcgg-cgcgtccgcaacgtccccgtcggcgccggcc 658 Query: 381 gccgcaag 388 |||||||| Sbjct: 659 gccgcaag 666
>gb|AY461803.1| Oryza sativa (japonica cultivar-group) Dof28 mRNA, complete cds Length = 879 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 197 ccaacaccaagttctgctactacaacaactacagcacgtcgcagccgcgccacttctgcc 256 Query: 318 agggctgccgccggtactggac 339 | ||||||||| |||||||| Sbjct: 257 gcgcctgccgccgctactggac 278
>ref|XM_474359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 170 ccaacaccaagttctgctactacaacaactacagcacgtcgcagccgcgccacttctgcc 229 Query: 318 agggctgccgccggtactggac 339 | ||||||||| |||||||| Sbjct: 230 gcgcctgccgccgctactggac 251
>gb|AC136450.7| Medicago truncatula clone mth2-34d6, complete sequence Length = 86095 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| || ||||||||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 33174 caacacgaaattctgctactacaacaactacaacctctctcagcctcgtcatttctgtaa 33115 Query: 319 gggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 |||||| || ||||||||||| || ||| |||| || |||||||||||||| Sbjct: 33114 aaactgccgtcgctactggaccaaaggtggcatccttcgtaacgtccccgtcgg 33061
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 145359 ccaacaccaagttctgctactacaacaactacagcacgtcgcagccgcgccacttctgcc 145300 Query: 318 agggctgccgccggtactggac 339 | ||||||||| |||||||| Sbjct: 145299 gcgcctgccgccgctactggac 145278
>dbj|AK107524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F12, full insert sequence Length = 1096 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 307 ccaacaccaagttctgctactacaacaactacagcacgtcgcagccgcgccacttctgcc 366 Query: 318 agggctgccgccggtactggac 339 | ||||||||| |||||||| Sbjct: 367 gcgcctgccgccgctactggac 388
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 89466 ccaacaccaagttctgctactacaacaactacagcacgtcgcagccgcgccacttctgcc 89407 Query: 318 agggctgccgccggtactggac 339 | ||||||||| |||||||| Sbjct: 89406 gcgcctgccgccgctactggac 89385
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 34562 ccaacaccaagttctgctactacaacaactacagcacgtcgcagccgcgccacttctgcc 34503 Query: 318 agggctgccgccggtactggac 339 | ||||||||| |||||||| Sbjct: 34502 gcgcctgccgccgctactggac 34481
>ref|NM_179795.1| Arabidopsis thaliana DNA binding / transcription factor AT2G28810 mRNA, complete cds Length = 1371 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 251 gactcggccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccac 310 ||||| ||||| ||||||||||| |||| |||||||||||||||| ||||||| |||||| Sbjct: 349 gactcagccaataccaagttctgttacttcaacaactacaacctcacgcagccacgccac 408 Query: 311 ttctgcaagggctgccgccggtactggac 339 |||||||| | ||||| || |||||||| Sbjct: 409 ttctgcaaagcttgccgtcgctactggac 437
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 251 gactcggccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccac 310 ||||| ||||| ||||||||||| |||| |||||||||||||||| ||||||| |||||| Sbjct: 35539 gactcagccaataccaagttctgttacttcaacaactacaacctcacgcagccacgccac 35598 Query: 311 ttctgcaagggctgccgccggtactggac 339 |||||||| | ||||| || |||||||| Sbjct: 35599 ttctgcaaagcttgccgtcgctactggac 35627
>emb|BX819308.1|CNS0A8SY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 251 gactcggccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccac 310 ||||| ||||| ||||||||||| |||| |||||||||||||||| ||||||| |||||| Sbjct: 346 gactcagccaataccaagttctgttacttcaacaactacaacctcacgcagccacgccac 405 Query: 311 ttctgcaagggctgccgccggtactggac 339 |||||||| | ||||| || |||||||| Sbjct: 406 ttctgcaaagcttgccgtcgctactggac 434
>emb|BX818903.1|CNS0A8YZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1436 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 251 gactcggccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccac 310 ||||| ||||| ||||||||||| |||| |||||||||||||||| ||||||| |||||| Sbjct: 343 gactcagccaataccaagttctgttacttcaacaactacaacctcacgcagccacgccac 402 Query: 311 ttctgcaagggctgccgccggtactggac 339 |||||||| | ||||| || |||||||| Sbjct: 403 ttctgcaaagcttgccgtcgctactggac 431
>emb|BX818852.1|CNS0A91K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1257 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 251 gactcggccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccac 310 ||||| ||||| ||||||||||| |||| |||||||||||||||| ||||||| |||||| Sbjct: 335 gactcagccaataccaagttctgttacttcaacaactacaacctcacgcagccacgccac 394 Query: 311 ttctgcaagggctgccgccggtactggac 339 |||||||| | ||||| || |||||||| Sbjct: 395 ttctgcaaagcttgccgtcgctactggac 423
>ref|NM_196421.1| Oryza sativa (japonica cultivar-group) putative H-protein promoter binding factor-2a (OSJNBa0060A14.11), mRNA Length = 1461 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||| Sbjct: 458 acaccaagttctgctacttcaacaactacaacgtcaaccagcctcgccacttctgcaagc 517 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| || ||||||||| |||||| | | ||||||||||||||||| | |||| Sbjct: 518 actgccagcgctactggaccgccggcggcgccatgcgcaacgtccccgtcggcgccggcc 577 Query: 381 gccgcaag 388 |||||||| Sbjct: 578 gccgcaag 585
>gb|BT017149.1| Zea mays clone EL01N0367A12.c mRNA sequence Length = 1003 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 309 acttctgcaagggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccg 368 |||||||||||||||||||||| |||||||||||||| || |||||||||||| |||| Sbjct: 18 acttctgcaagggctgccgccgctactggaccaagggtgggtccctccgcaacgtgcccg 77 Query: 369 tcgggggcggctgccg 384 |||| ||||| ||||| Sbjct: 78 tcggcggcgggtgccg 93
>gb|AY225586.1| Brassica rapa subsp. oleifera HRa (HRa), HRb (HRb), and HRc (HRc) genes, complete cds Length = 18869 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 252 actcggccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccact 311 ||||| ||||||| |||||||| |||||||||||||||||| |||| ||||| || |||| Sbjct: 749 actcgaccaacactaagttctgttactacaacaactacaacttctctcagcctcgtcact 808 Query: 312 tctgcaagggctgccgccggtactggac 339 |||||||| ||| ||||| |||||||| Sbjct: 809 tctgcaagtcctgtcgccgttactggac 836
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||| Sbjct: 60959 acaccaagttctgctacttcaacaactacaacgtcaaccagcctcgccacttctgcaagc 60900 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcggct 380 ||||| || ||||||||| |||||| | | ||||||||||||||||| | |||| Sbjct: 60899 actgccagcgctactggaccgccggcggcgccatgcgcaacgtccccgtcggcgccggcc 60840 Query: 381 gccgcaag 388 |||||||| Sbjct: 60839 gccgcaag 60832
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||||||||||||||||| |||||||||| ||||||||| | Sbjct: 65193 acaccaagttctgctactacaacaactacaacacggcgcagccgcggcacttctgccgcg 65134 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||||||||| |||||||| |||||| |||||||||||||||| |||| Sbjct: 65133 cctgccgccgctactggacgctcggcggctccctccgcaacgtccccatcgg 65082
>ref|XM_470300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1809 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 540 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 598
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 59358 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 59300
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 643 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 701
>gb|AY224429.1| Oryza sativa (japonica cultivar-group) isolate 20575 putative H-protein promoter binding factor-2a mRNA, complete cds Length = 1323 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 344 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 402
>emb|AJ312330.1|HVU312330 Hordeum vulgare partial dof166 gene for dof zinc finger protein, exon 1 Length = 1817 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1058 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 1116
>dbj|AK104523.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F03, full insert sequence Length = 1776 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 531 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 589
>dbj|AK099490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026L11, full insert sequence Length = 1800 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 532 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 590
>dbj|AK066912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G12, full insert sequence Length = 1496 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 995 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 937
>dbj|AK060900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D05, full insert sequence Length = 1776 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 531 acaccaagttctgctactacaacaactacaacatcaaccagccgcgccacttctgcaag 589
>dbj|AK068588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152P10, full insert sequence Length = 1381 Score = 79.8 bits (40), Expect = 8e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagg 320 |||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||| Sbjct: 472 acaccaagttctgctacttcaacaactacaacgtcaaccagcctcgccacttctgcaagc 531 Query: 321 gctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||||| || ||||||||| |||||| | | ||||||||||||||||| Sbjct: 532 actgccagcgctactggaccgccggcggcgccatgcgcaacgtccccgtcgg 583
>ref|NM_129315.2| Arabidopsis thaliana DNA binding / transcription factor AT2G37590 mRNA, complete cds Length = 1263 Score = 77.8 bits (39), Expect = 3e-11 Identities = 105/127 (82%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||| ||||||||||| |||| | || || ||||||||||||| Sbjct: 438 ccaacaccaagttctgctacttcaacaactacagcctcactcaaccacgccacttctgca 497 Query: 318 agggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcg 377 || |||||| | |||||||| ||||| |||||||||||||| ||||| || | Sbjct: 498 agacctgccggagatactggacacgtggcggagctctccgcaacgtcccagtcggcggtg 557 Query: 378 gctgccg 384 ||||||| Sbjct: 558 gctgccg 564
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 77.8 bits (39), Expect = 3e-11 Identities = 105/127 (82%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||| ||||||||||| |||| | || || ||||||||||||| Sbjct: 25860 ccaacaccaagttctgctacttcaacaactacagcctcactcaaccacgccacttctgca 25919 Query: 318 agggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcg 377 || |||||| | |||||||| ||||| |||||||||||||| ||||| || | Sbjct: 25920 agacctgccggagatactggacacgtggcggagctctccgcaacgtcccagtcggcggtg 25979 Query: 378 gctgccg 384 ||||||| Sbjct: 25980 gctgccg 25986
>emb|BX820837.1|CNS0A8PT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 77.8 bits (39), Expect = 3e-11 Identities = 105/127 (82%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||||||||||| ||||||||||| |||| | || || ||||||||||||| Sbjct: 439 ccaacaccaagttctgctacttcaacaactacagcctcactcaaccacgccacttctgca 498 Query: 318 agggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgggggcg 377 || |||||| | |||||||| ||||| |||||||||||||| ||||| || | Sbjct: 499 agacctgccggagatactggacacgtggcggagctctccgcaacgtcccagtcggcggtg 558 Query: 378 gctgccg 384 ||||||| Sbjct: 559 gctgccg 565
>emb|AJ312329.1|HVU312329 Hordeum vulgare partial dof171 gene for dof zinc finger protein Length = 535 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||| | Sbjct: 115 gtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctcac 174 Query: 298 gcagccgcgccacttctgc 316 ||||| || ||||||||| Sbjct: 175 ccagccccgtcacttctgc 193
>gb|AF224765.1| Andira aubletii clone BwH11-I microsatellite sequence Length = 474 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||||||||||||||||||||| ||||||| |||| | || || ||| |||||||||| Sbjct: 74 caacaccaagttctgctactacaataactacagcctcactcaacctcgctacttctgcaa 15 Query: 319 gggctgccgc 328 || ||||||| Sbjct: 14 ggcctgccgc 5
>ref|NM_114901.2| Arabidopsis thaliana OBP1; DNA binding / transcription factor AT3G50410 (OBP1) mRNA, complete cds Length = 996 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| |||||||| |||||||||||||||||| |||| ||||| || |||||||||| Sbjct: 237 ccaacactaagttctgttactacaacaactacaacttctctcagcctcgtcacttctgca 296 Query: 318 a 318 | Sbjct: 297 a 297
>ref|NM_180607.1| Arabidopsis thaliana OBP2; DNA binding / transcription factor AT1G07640 (OBP2) transcript variant AT1G07640.1 mRNA, complete cds Length = 1418 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| |||||| | ||||| || ||||||||||| Sbjct: 324 caacactaagttctgttactacaacaactataacctcactcagcctcgtcacttctgcaa 383 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 384 aggttgccgtcgctactggac 404
>ref|NM_100637.3| Arabidopsis thaliana OBP2; DNA binding / transcription factor AT1G07640 (OBP2) transcript variant AT1G07640.2 mRNA, complete cds Length = 1538 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| |||||| | ||||| || ||||||||||| Sbjct: 444 caacactaagttctgttactacaacaactataacctcactcagcctcgtcacttctgcaa 503 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 504 aggttgccgtcgctactggac 524
>ref|NM_001035911.1| Arabidopsis thaliana OBP2; DNA binding AT1G07640 (OBP2) transcript variant AT1G07640.3 mRNA, complete cds Length = 1588 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| |||||| | ||||| || ||||||||||| Sbjct: 494 caacactaagttctgttactacaacaactataacctcactcagcctcgtcacttctgcaa 553 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 554 aggttgccgtcgctactggac 574
>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1 Length = 111122 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| |||||||| |||||||||||||||||| |||| ||||| || |||||||||| Sbjct: 110363 ccaacactaagttctgttactacaacaactacaacttctctcagcctcgtcacttctgca 110422 Query: 318 a 318 | Sbjct: 110423 a 110423
>gb|AY093351.1| Arabidopsis thaliana strong similarity to zinc finger protein OBP2 (At1g07640) mRNA, complete cds Length = 922 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| |||||| | ||||| || ||||||||||| Sbjct: 87 caacactaagttctgttactacaacaactataacctcactcagcctcgtcacttctgcaa 146 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 147 aggttgccgtcgctactggac 167
>gb|AY062715.1| Arabidopsis thaliana Strong similarity to zinc finger protein OBP2 (At1g07640; F24B9.30) mRNA, complete cds Length = 1399 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| |||||| | ||||| || ||||||||||| Sbjct: 305 caacactaagttctgttactacaacaactataacctcactcagcctcgtcacttctgcaa 364 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 365 aggttgccgtcgctactggac 385
>gb|AC007583.2|F24B9 Arabidopsis thaliana chromosome 1 BAC F24B9 sequence, complete sequence Length = 107234 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| |||||| | ||||| || ||||||||||| Sbjct: 89784 caacactaagttctgttactacaacaactataacctcactcagcctcgtcacttctgcaa 89843 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 89844 aggttgccgtcgctactggac 89864
>emb|X89192.1|ATDNABPRO A.thaliana mRNA for DNA binding protein Length = 923 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| |||||||| |||||||||||||||||| |||| ||||| || |||||||||| Sbjct: 147 ccaacactaagttctgttactacaacaactacaacttctctcagcctcgtcacttctgca 206 Query: 318 a 318 | Sbjct: 207 a 207
>gb|AF155816.1|AF155816 Arabidopsis thaliana zinc finger protein OBP2 mRNA, complete cds Length = 1408 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| |||||| | ||||| || ||||||||||| Sbjct: 317 caacactaagttctgttactacaacaactataacctcactcagcctcgtcacttctgcaa 376 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 377 aggttgccgtcgctactggac 397
>emb|AJ242853.1|STU242853 Solanum tuberosum mRNA for Dof zinc finger protein (dof1 gene) Length = 1243 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| ||||||||||||| ||||||||||||||| || || || | |||||||||||| Sbjct: 301 aacacaaagttctgctacttcaacaactacaacctttcccaaccaagacacttctgcaag 360 Query: 320 ggctgccgccggtactggac 339 ||| |||||||||||||| Sbjct: 361 acctgtcgccggtactggac 380
>ref|NM_115104.1| Arabidopsis thaliana DNA binding / transcription factor AT3G52440 mRNA, complete cds Length = 744 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| |||||||||||||| | |||| | ||||| ||| |||||||||| Sbjct: 100 aacacaaagttctgttactacaacaactatagcctcactcagcctcgctacttctgcaaa 159 Query: 320 ggctgccgccggtactggaccaa 342 ||||||||| | || |||||||| Sbjct: 160 ggctgccgcagatattggaccaa 182
>ref|NM_102596.3| Arabidopsis thaliana DNA binding / transcription factor AT1G28310 transcript variant AT1G28310.1 mRNA, complete cds Length = 1635 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| |||||| || || || ||||| |||| Sbjct: 472 ccaacacaaagttctgctactacaacaactacagcctctctcaaccacggcacttttgca 531 Query: 318 agg 320 ||| Sbjct: 532 agg 534
>ref|NM_001036023.1| Arabidopsis thaliana DNA binding AT1G28310 transcript variant AT1G28310.2 mRNA, complete cds Length = 1627 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| |||||| || || || ||||| |||| Sbjct: 159 ccaacacaaagttctgctactacaacaactacagcctctctcaaccacggcacttttgca 218 Query: 318 agg 320 ||| Sbjct: 219 agg 221
>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete sequence Length = 121720 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| |||||| || || || ||||| |||| Sbjct: 31702 ccaacacaaagttctgctactacaacaactacagcctctctcaaccacggcacttttgca 31761 Query: 318 agg 320 ||| Sbjct: 31762 agg 31764
>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6 Length = 93443 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| |||||||||||||| | |||| | ||||| ||| |||||||||| Sbjct: 17743 aacacaaagttctgttactacaacaactatagcctcactcagcctcgctacttctgcaaa 17802 Query: 320 ggctgccgccggtactggaccaa 342 ||||||||| | || |||||||| Sbjct: 17803 ggctgccgcagatattggaccaa 17825
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||| Sbjct: 100212 acaccaagttctgctactataacaactacaacatcaaccagccacgccacttctgcaag 100154
>gb|AY299272.1| Arabidopsis thaliana clone D2 mRNA sequence Length = 1642 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| |||||| || || || ||||| |||| Sbjct: 159 ccaacacaaagttctgctactacaacaactacagcctctctcaaccacggcacttttgca 218 Query: 318 agg 320 ||| Sbjct: 219 agg 221
>emb|AJ312326.1|HVU312326 Hordeum vulgare dof140 gene for dof zinc finger protein Length = 795 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccactt 312 ||||||||||||||||||||| |||||||||| |||| ||||||| |||||||| Sbjct: 254 ccaacaccaagttctgctacttcaacaactactccctcacgcagccccgccactt 308
>ref|NM_126093.1| Arabidopsis thaliana DNA binding / transcription factor AT5G66940 mRNA, complete cds Length = 678 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 |||||||||||||||| |||||||||||||||||| |||| || || || || ||||||| Sbjct: 119 ccaacaccaagttctgttactacaacaactacaacttctcacaacctcgtcatttctgca 178 Query: 318 ag 319 || Sbjct: 179 ag 180
>gb|AY389591.1| Hyacinthus orientalis H-protein promoter binding factor (DOF) mRNA, partial cds Length = 505 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggc 322 |||||||||||||||| ||||||||||||| || |||||||| |||||||||| | | Sbjct: 56 accaagttctgctacttcaacaactacaacgtcaaccagccgcgtcacttctgcaggaac 115 Query: 323 tgccgccggtactggacc 340 |||| ||| ||||||||| Sbjct: 116 tgccaccgctactggacc 133
>dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10 Length = 31132 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 |||||||||||||||| |||||||||||||||||| |||| || || || || ||||||| Sbjct: 1176 ccaacaccaagttctgttactacaacaactacaacttctcacaacctcgtcatttctgca 1117 Query: 318 ag 319 || Sbjct: 1116 ag 1115
>dbj|AB087850.1| Pisum sativum PsDof5 mRNA for DNA binding with one finger 5 protein, complete cds Length = 1023 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||| ||||||||||||||||||||| ||| |||||||| || || |||| Sbjct: 249 ccaacaccaagttttgctactacaacaactacaactactctcagccgcgacatttatgca 308 Query: 318 agggctgccgccggtactggac 339 | | ||||| |||||||||| Sbjct: 309 aagcttgccgtaggtactggac 330
>ref|NM_114430.2| Arabidopsis thaliana DNA binding / transcription factor AT3G45610 mRNA, complete cds Length = 1072 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| ||||| || || ||| ||||||||| Sbjct: 236 ccaacacaaagttctgctactacaacaactacagtctctctcaacctcgctacttctgca 295 Query: 318 a 318 | Sbjct: 296 a 296
>ref|NM_113022.3| Arabidopsis thaliana ADOF2; DNA binding / transcription factor AT3G21270 (ADOF2) mRNA, complete cds Length = 1078 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| || ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 367 aacactaaattctgttactacaacaactacaatctctcacagcctcgtcacttttgcaaa 426 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 |||| || || |||||||| || |||||| ||||| ||||| |||||||| Sbjct: 427 agctgtcgtcgttactggactaaaggcggcgctctccgtaacgttcccgtcgg 479
>gb|AY150391.1| Arabidopsis thaliana Dof zinc finger protein (At3g21270) mRNA, complete cds Length = 646 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| || ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 112 aacactaaattctgttactacaacaactacaatctctcacagcctcgtcacttttgcaaa 171 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 |||| || || |||||||| || |||||| ||||| ||||| |||||||| Sbjct: 172 agctgtcgtcgttactggactaaaggcggcgctctccgtaacgttcccgtcgg 224
>gb|AY045847.1| Arabidopsis thaliana putative Dof zinc finger protein (At3g21270) mRNA, complete cds Length = 1060 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| || ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 337 aacactaaattctgttactacaacaactacaatctctcacagcctcgtcacttttgcaaa 396 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 |||| || || |||||||| || |||||| ||||| ||||| |||||||| Sbjct: 397 agctgtcgtcgttactggactaaaggcggcgctctccgtaacgttcccgtcgg 449
>emb|AL138657.1|ATF9K21 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21 Length = 110980 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| ||||| || || ||| ||||||||| Sbjct: 82614 ccaacacaaagttctgctactacaacaactacagtctctctcaacctcgctacttctgca 82555 Query: 318 a 318 | Sbjct: 82554 a 82554
>gb|AY062783.1| Arabidopsis thaliana dof6 zinc finger protein (F9K21.19) mRNA, complete cds Length = 972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| ||||| || || ||| ||||||||| Sbjct: 236 ccaacacaaagttctgctactacaacaactacagtctctctcaacctcgctacttctgca 295 Query: 318 a 318 | Sbjct: 296 a 296
>gb|BT006284.1| Arabidopsis thaliana At3g45610 mRNA, complete cds Length = 738 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| ||||| || || ||| ||||||||| Sbjct: 143 ccaacacaaagttctgctactacaacaactacagtctctctcaacctcgctacttctgca 202 Query: 318 a 318 | Sbjct: 203 a 203
>emb|BX815039.1|CNS0ACXL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1403 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| ||||| | ||||| || ||||||||||| Sbjct: 405 caacactaagttctgttactacaacaactatgacctcactcagcctcgtcacttctgcaa 464 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 465 aggttgccgtcgctactggac 485
>gb|AY088198.1| Arabidopsis thaliana clone 4289 mRNA, complete sequence Length = 1538 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 |||||| |||||||| |||||||||||||| |||||| | ||||| || |||||||||| Sbjct: 444 caacactaagttctgttactacaacaactataacctcactcagcctcgttacttctgcaa 503 Query: 319 gggctgccgccggtactggac 339 || ||||| || |||||||| Sbjct: 504 aggttgccgtcgctactggac 524
>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8 Length = 85599 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| || ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 56853 aacactaaattctgttactacaacaactacaatctctcacagcctcgtcacttttgcaaa 56912 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 |||| || || |||||||| || |||||| ||||| ||||| |||||||| Sbjct: 56913 agctgtcgtcgttactggactaaaggcggcgctctccgtaacgttcccgtcgg 56965
>emb|AJ243033.1|ATH243033 Arabidopsis thaliana mRNA for dof zinc finger protein (dof6 gene) Length = 1024 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| ||||||||||||||||||||||||| ||||| || || ||| ||||||||| Sbjct: 233 ccaacacaaagttctgctactacaacaactacagtctctctcaacctcgctacttctgca 292 Query: 318 a 318 | Sbjct: 293 a 293
>dbj|AB017565.1| Arabidopsis thaliana adof2 mRNA for Dof zinc finger protein, complete cds Length = 1034 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| || ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 324 aacactaaattctgttactacaacaactacaatctctcacagcctcgtcacttttgcaaa 383 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 |||| || || |||||||| || |||||| ||||| ||||| |||||||| Sbjct: 384 agctgtcgtcgttactggactaaaggcggcgctctccgtaacgttcccgtcgg 436
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaac 292 |||||||||||||||||||||||||||||||| Sbjct: 65971 acaccaagttctgctactacaacaactacaac 65940
>emb|BX816643.1|CNS0AD27 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1637 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctc 297 ||||||| ||||||||||||||||||||||||| |||||| Sbjct: 474 ccaacacaaagttctgctactacaacaactacagcctctc 513
>emb|AJ312328.1|HVU312328 Hordeum vulgare partial dof151 gene for dof zinc finger protein Length = 657 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgc 316 |||||||||||||||||| ||||||||||||| || |||||||| ||||||||| Sbjct: 242 acaccaagttctgctacttcaacaactacaacgtcaaccagccgcggcacttctgc 297
>ref|NM_103658.2| Arabidopsis thaliana DNA binding / transcription factor AT1G47655 mRNA, complete cds Length = 942 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 262 caccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaaggg 321 |||||||||||| |||||||||||||| |||||| | ||||| ||| ||| |||||| Sbjct: 186 caccaagttctgttactacaacaactataacctcgctcagcctcgctactactgcaaatc 245 Query: 322 ctgccgccggtactggac 339 |||||||| |||||||| Sbjct: 246 ttgccgccgttactggac 263
>ref|NM_191985.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgc 316 |||||||||||||||| ||||||||||||| | ||||||||||||| ||||| Sbjct: 280 accaagttctgctacttcaacaactacaacgtgcggcagccgcgccacctctgc 333
>gb|AY088946.1| Arabidopsis thaliana clone 103581 mRNA, complete sequence Length = 936 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 262 caccaagttctgctactacaacaactacaacctc 295 |||||||||||| ||||||||||||||||||||| Sbjct: 180 caccaagttctgttactacaacaactacaacctc 213
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgc 316 |||||||||||||||| ||||||||||||| | ||||||||||||| ||||| Sbjct: 78604 accaagttctgctacttcaacaactacaacgtgcggcagccgcgccacctctgc 78657
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgc 316 |||||||||||||||| ||||||||||||| | ||||||||||||| ||||| Sbjct: 137332 accaagttctgctacttcaacaactacaacgtgcggcagccgcgccacctctgc 137385
>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 171769 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 262 caccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaaggg 321 |||||||||||| |||||||||||||| |||||| | ||||| ||| ||| |||||| Sbjct: 40700 caccaagttctgttactacaacaactataacctcgctcagcctcgctactactgcaaatc 40641 Query: 322 ctgccgccggtactggac 339 |||||||| |||||||| Sbjct: 40640 ttgccgccgttactggac 40623
>ref|NM_119961.2| Arabidopsis thaliana DNA binding / transcription factor AT4G38000 mRNA, complete cds Length = 963 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||||||| |||||||||||||||||||||| | | || ||||| || |||| |||||| Sbjct: 223 caacaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgcaa 282 Query: 319 g 319 | Sbjct: 283 g 283
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||||||| |||||||||||||||||||||| | | || ||||| || |||| |||||| Sbjct: 161015 caacaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgcaa 161074 Query: 319 g 319 | Sbjct: 161075 g 161075
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||||||| |||||||||||||||||||||| | | || ||||| || |||| |||||| Sbjct: 46600 caacaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgcaa 46659 Query: 319 g 319 | Sbjct: 46660 g 46660
>gb|BT006092.1| Arabidopsis thaliana clone U20996 putative Dof zinc finger protein (At4g38000) mRNA, complete cds Length = 772 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||||||| |||||||||||||||||||||| | | || ||||| || |||| |||||| Sbjct: 147 caacaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgcaa 206 Query: 319 g 319 | Sbjct: 207 g 207
>gb|BT005767.1| Arabidopsis thaliana clone RAFL15-43-I22 (R20996) putative Dof zinc finger protein (At4g38000) mRNA, complete cds Length = 1006 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 259 caacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||||||| |||||||||||||||||||||| | | || ||||| || |||| |||||| Sbjct: 223 caacaccaaattctgctactacaacaactacagcttgtctcagccacgtcactactgcaa 282 Query: 319 g 319 | Sbjct: 283 g 283
>ref|NM_105137.2| Arabidopsis thaliana DNA binding / transcription factor AT1G64620 mRNA, complete cds Length = 1589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagcc 303 |||||||||||||| |||||||||||||||| ||| ||||||| Sbjct: 468 aacaccaagttctgttactacaacaactacagcctgacgcagcc 511
>emb|BX815139.1|CNS0ABDR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagcc 303 |||||||||||||| |||||||||||||||| ||| ||||||| Sbjct: 254 aacaccaagttctgttactacaacaactacagcctgacgcagcc 297
>gb|BT005148.1| Arabidopsis thaliana clone U20433 putative Dof zinc finger protein (At1g64620) mRNA, complete cds Length = 1090 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagcc 303 |||||||||||||| |||||||||||||||| ||| ||||||| Sbjct: 172 aacaccaagttctgttactacaacaactacagcctgacgcagcc 215
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I, complete sequence Length = 113172 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagcc 303 |||||||||||||| |||||||||||||||| ||| ||||||| Sbjct: 75861 aacaccaagttctgttactacaacaactacagcctgacgcagcc 75904
>gb|BT004047.1| Arabidopsis thaliana clone RAFL14-91-B14 (R20433) putative Dof zinc finger protein (At1g64620) mRNA, complete cds Length = 1611 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagcc 303 |||||||||||||| |||||||||||||||| ||| ||||||| Sbjct: 474 aacaccaagttctgttactacaacaactacagcctgacgcagcc 517
>gb|AY084898.1| Arabidopsis thaliana clone 120488 mRNA, complete sequence Length = 1359 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagcc 303 |||||||||||||| |||||||||||||||| ||| ||||||| Sbjct: 236 aacaccaagttctgttactacaacaactacagcctgacgcagcc 279
>gb|BT020467.1| Arabidopsis thaliana At5g62940 gene, complete cds Length = 1377 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggctgc 325 |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||| || Sbjct: 296 aagttctgttactacaataactacagcctctctcagcctcgttacttctgcaagacttgt 355 Query: 326 cgccggtactggaccaagggcgg 348 ||||| |||||||| || ||||| Sbjct: 356 cgccgttactggacaaaaggcgg 378
>ref|NM_125688.2| Arabidopsis thaliana DNA binding / transcription factor AT5G62940 mRNA, complete cds Length = 1560 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggctgc 325 |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||| || Sbjct: 427 aagttctgttactacaataactacagcctctctcagcctcgttacttctgcaagacttgt 486 Query: 326 cgccggtactggaccaagggcgg 348 ||||| |||||||| || ||||| Sbjct: 487 cgccgttactggacaaaaggcgg 509
>ref|NM_125957.2| Arabidopsis thaliana DNA binding / transcription factor AT5G65590 mRNA, complete cds Length = 1391 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| |||||||| |||||||||||||||| ||||| || || || ||||||||||| Sbjct: 250 aacacaaagttctgttactacaacaactacagtctctctcaacctcgtcacttctgcaa 308
>ref|NM_101986.1| Arabidopsis thaliana DNA binding / transcription factor AT1G21340 mRNA, complete cds Length = 783 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||| || || ||||||||||||| | | || ||||| | ||||||||| Sbjct: 137 ccaacaccaagttttgttattacaacaactacagcttgtctcagcctagatacttctgca 196 Query: 318 agggctgccgccggtactggaccaagggcgg 348 |||| ||||| || |||||||| || ||||| Sbjct: 197 agggttgccgtcgttactggacgaaaggcgg 227
>ref|XM_479581.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1803 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 ||||||||||||||||||||||||||| Sbjct: 416 aagttctgctactacaacaactacaac 442
>ref|XM_506580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0060O17.31 mRNA Length = 1849 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 ||||||||||||||||||||||||||| Sbjct: 425 aagttctgctactacaacaactacaac 451
>gb|BT015717.1| Arabidopsis thaliana At4g35930 gene, complete cds Length = 951 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| |||||||| |||||||||||||||| ||||| || || || ||||||||||| Sbjct: 148 aacacaaagttctgttactacaacaactacagtctctctcaacctcgtcacttctgcaa 206
>gb|BT014981.1| Arabidopsis thaliana At5g65590 gene, complete cds Length = 1333 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| |||||||| |||||||||||||||| ||||| || || || ||||||||||| Sbjct: 227 aacacaaagttctgttactacaacaactacagtctctctcaacctcgtcacttctgcaa 285
>gb|DQ446268.1| Arabidopsis thaliana clone pENTR221-At1g21340 Dof-type zinc finger domain-containing protein (At1g21340) mRNA, complete cds Length = 783 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||| || || ||||||||||||| | | || ||||| | ||||||||| Sbjct: 137 ccaacaccaagttttgttattacaacaactacagcttgtctcagcctagatacttctgca 196 Query: 318 agggctgccgccggtactggaccaagggcgg 348 |||| ||||| || |||||||| || ||||| Sbjct: 197 agggttgccgtcgttactggacgaaaggcgg 227
>gb|AY224430.1| Oryza sativa (japonica cultivar-group) isolate 20587 AOBP-like protein mRNA, complete cds Length = 1431 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 ||||||||||||||||||||||||||| Sbjct: 355 aagttctgctactacaacaactacaac 381
>emb|BX830120.1|CNS0A1HY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggctgc 325 |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||| || Sbjct: 340 aagttctgttactacaataactacagcctctctcagcctcgttacttctgcaagacttgt 399 Query: 326 cgccggtactggaccaagggcgg 348 ||||| |||||||| || ||||| Sbjct: 400 cgccgttactggacaaaaggcgg 422
>gb|AC015447.8|AC015447 Arabidopsis thaliana chromosome I BAC F24J8 genomic sequence, complete sequence Length = 108365 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||||||||| || || ||||||||||||| | | || ||||| | ||||||||| Sbjct: 4258 ccaacaccaagttttgttattacaacaactacagcttgtctcagcctagatacttctgca 4317 Query: 318 agggctgccgccggtactggaccaagggcgg 348 |||| ||||| || |||||||| || ||||| Sbjct: 4318 agggttgccgtcgttactggacgaaaggcgg 4348
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 266 aagttctgctactacaacaactacaac 292 ||||||||||||||||||||||||||| Sbjct: 142592 aagttctgctactacaacaactacaac 142566
>dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L13 Length = 63921 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| |||||||| |||||||||||||||| ||||| || || || ||||||||||| Sbjct: 29190 aacacaaagttctgttactacaacaactacagtctctctcaacctcgtcacttctgcaa 29132
>dbj|AB009053.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2 Length = 78145 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 266 aagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggctgc 325 |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||| || Sbjct: 72688 aagttctgttactacaataactacagcctctctcagcctcgttacttctgcaagacttgt 72629 Query: 326 cgccggtactggaccaagggcgg 348 ||||| |||||||| || ||||| Sbjct: 72628 cgccgttactggacaaaaggcgg 72606
>dbj|AK119625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H10, full insert sequence Length = 1767 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 ||||||||||||||||||||||||||| Sbjct: 424 aagttctgctactacaacaactacaac 450
>dbj|AK104095.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E07, full insert sequence Length = 1803 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 ||||||||||||||||||||||||||| Sbjct: 416 aagttctgctactacaacaactacaac 442
>dbj|AK065816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041J16, full insert sequence Length = 1847 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 ||||||||||||||||||||||||||| Sbjct: 424 aagttctgctactacaacaactacaac 450
>gb|BT020576.1| Arabidopsis thaliana At5g62940 gene, complete cds Length = 1119 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagggctgc 325 |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||| || Sbjct: 250 aagttctgttactacaataactacagcctctctcagcctcgttacttctgcaagacttgt 309 Query: 326 cgccggtactggaccaagggcgg 348 ||||| |||||||| || ||||| Sbjct: 310 cgccgttactggacaaaaggcgg 332
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 259 caacaccaagttctgctactacaacaacta 288 |||||||||||||||||| ||||||||||| Sbjct: 118458 caacaccaagttctgctattacaacaacta 118429
>ref|NM_125478.2| Arabidopsis thaliana OBP4; DNA binding / transcription factor AT5G60850 (OBP4) mRNA, complete cds Length = 1420 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||| Sbjct: 307 aacacaaagttctgttactacaacaattacaatctttctcagcctcgtcacttttgcaag 366 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||| || || |||||||| || || || | ||||| ||||| |||||||| Sbjct: 367 aactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcgg 419
>gb|AY081709.1| Arabidopsis thaliana AT5g60850/mae1_100 mRNA, complete cds Length = 924 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||| Sbjct: 178 aacacaaagttctgttactacaacaattacaatctttctcagcctcgtcacttttgcaag 237 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||| || || |||||||| || || || | ||||| ||||| |||||||| Sbjct: 238 aactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcgg 290
>gb|AY056413.1| Arabidopsis thaliana AT5g60850/mae1_100 mRNA, complete cds Length = 1415 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||| Sbjct: 306 aacacaaagttctgttactacaacaattacaatctttctcagcctcgtcacttttgcaag 365 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||| || || |||||||| || || || | ||||| ||||| |||||||| Sbjct: 366 aactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcgg 418
>emb|BX830682.1|CNS0A0NG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1394 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgc 316 ||||| |||||||| |||||||||||||||| ||||| || || || ||||||||| Sbjct: 250 aacacaaagttctgttactacaacaactacagtctctctcaacctcgtcacttctgc 306
>emb|BX829441.1|CNS0A07Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1364 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||| Sbjct: 284 aacacaaagttctgttactacaacaattacaatctttctcagcctcgtcacttttgcaag 343 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||| || || |||||||| || || || | ||||| ||||| |||||||| Sbjct: 344 aactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcgg 396
>emb|BX831998.1|CNS09ZL5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZB02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1363 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||| Sbjct: 278 aacacaaagttctgttactacaacaattacaatctttctcagcctcgtcacttttgcaag 337 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||| || || |||||||| || || || | ||||| ||||| |||||||| Sbjct: 338 aactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcgg 390
>gb|AY085856.1| Arabidopsis thaliana clone 19080 mRNA, complete sequence Length = 1218 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||| Sbjct: 292 aacacaaagttctgttactacaacaattacaatctttctcagcctcgtcacttttgcaag 351 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||| || || |||||||| || || || | ||||| ||||| |||||||| Sbjct: 352 aactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcgg 404
>dbj|AB015472.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAE1 Length = 54632 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||| Sbjct: 45958 aacacaaagttctgttactacaacaattacaatctttctcagcctcgtcacttttgcaag 46017 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||| || || |||||||| || || || | ||||| ||||| |||||||| Sbjct: 46018 aactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcgg 46070
>dbj|AB087849.1| Pisum sativum PsDof4 mRNA for DNA binding with one finger 4 protein, complete cds Length = 1388 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaactaca 290 |||||||||| ||||| |||||||||||||||| Sbjct: 264 ccaacaccaaattctgttactacaacaactaca 296
>gb|AF155817.1|AF155817 Arabidopsis thaliana zinc finger protein OBP4 mRNA, complete cds Length = 1401 Score = 50.1 bits (25), Expect = 0.008 Identities = 91/113 (80%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 ||||| |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||| Sbjct: 288 aacacaaagttctgttactacaacaattacaatctttctcagcctcgtcacttttgcaag 347 Query: 320 ggctgccgccggtactggaccaagggcggcctcctccgcaacgtccccgtcgg 372 ||| || || |||||||| || || || | ||||| ||||| |||||||| Sbjct: 348 aactgtcgtcgttactggactaaaggtggtgttctccgtaacgttcccgtcgg 400
>ref|NM_102442.1| Arabidopsis thaliana DNA binding / transcription factor AT1G26790 mRNA, complete cds Length = 1191 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 261 acaccaagttctgctactacaacaactacaac 292 ||||||| ||||| |||||||||||||||||| Sbjct: 431 acaccaaattctgttactacaacaactacaac 462
>ref|NM_120324.2| Arabidopsis thaliana DNA binding / transcription factor AT5G02460 mRNA, complete cds Length = 1500 Score = 48.1 bits (24), Expect = 0.030 Identities = 66/80 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||| ||||| |||| ||||||||||| ||| | || || |||||||||||||| Sbjct: 310 aacaccaaattctgttacttcaacaactacagtctcactcaacctcgccacttctgcaaa 369 Query: 320 ggctgccgccggtactggac 339 | ||||| || |||||||| Sbjct: 370 gcatgccgtcgttactggac 389
>gb|BT015697.1| Arabidopsis thaliana At5g02460 mRNA, complete cds Length = 996 Score = 48.1 bits (24), Expect = 0.030 Identities = 66/80 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||| ||||| |||| ||||||||||| ||| | || || |||||||||||||| Sbjct: 310 aacaccaaattctgttacttcaacaactacagtctcactcaacctcgccacttctgcaaa 369 Query: 320 ggctgccgccggtactggac 339 | ||||| || |||||||| Sbjct: 370 gcatgccgtcgttactggac 389
>gb|BT014890.1| Arabidopsis thaliana At5g02460 mRNA, complete cds Length = 1025 Score = 48.1 bits (24), Expect = 0.030 Identities = 66/80 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||| ||||| |||| ||||||||||| ||| | || || |||||||||||||| Sbjct: 330 aacaccaaattctgttacttcaacaactacagtctcactcaacctcgccacttctgcaaa 389 Query: 320 ggctgccgccggtactggac 339 | ||||| || |||||||| Sbjct: 390 gcatgccgtcgttactggac 409
>emb|AL162971.1|ATT22P11 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P11 (ESSA project) Length = 96424 Score = 48.1 bits (24), Expect = 0.030 Identities = 66/80 (82%) Strand = Plus / Minus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||| ||||| |||| ||||||||||| ||| | || || |||||||||||||| Sbjct: 21369 aacaccaaattctgttacttcaacaactacagtctcactcaacctcgccacttctgcaaa 21310 Query: 320 ggctgccgccggtactggac 339 | ||||| || |||||||| Sbjct: 21309 gcatgccgtcgttactggac 21290
>emb|AL162874.1|ATT1E22 Arabidopsis thaliana DNA chromosome 5, BAC clone T1E22 (ESSA project) Length = 96575 Score = 48.1 bits (24), Expect = 0.030 Identities = 66/80 (82%) Strand = Plus / Minus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||| ||||| |||| ||||||||||| ||| | || || |||||||||||||| Sbjct: 89388 aacaccaaattctgttacttcaacaactacagtctcactcaacctcgccacttctgcaaa 89329 Query: 320 ggctgccgccggtactggac 339 | ||||| || |||||||| Sbjct: 89328 gcatgccgtcgttactggac 89309
>emb|BX826242.1|CNS0A501 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL93ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1081 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagcc 303 ||||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 366 aacactaaattctgttactacaacaactacaatctctcacagcc 409
>emb|BX829408.1|CNS09YXP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZE06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1532 Score = 48.1 bits (24), Expect = 0.030 Identities = 66/80 (82%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaag 319 |||||||| ||||| |||| ||||||||||| ||| | || || |||||||||||||| Sbjct: 364 aacaccaaattctgttacttcaacaactacagtctcactcaacctcgccacttctgcaaa 423 Query: 320 ggctgccgccggtactggac 339 | ||||| || |||||||| Sbjct: 424 gcatgccgtcgttactggac 443
>gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana BAC T24P13 from chromosome I, complete sequence Length = 98630 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Minus Query: 261 acaccaagttctgctactacaacaactacaac 292 ||||||| ||||| |||||||||||||||||| Sbjct: 74375 acaccaaattctgttactacaacaactacaac 74344
>gb|AY111543.1| Zea mays CL1878_1 mRNA sequence Length = 1200 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaa 285 |||||| || |||||||| |||||||||||| |||||||||||||| Sbjct: 228 gtgcccacgctgcgactccaacaacaccaagttttgctactacaacaa 275
>gb|U82230.1|ZMU82230 Zea mays endosperm-specific prolamin box binding factor (PBF) mRNA, complete cds Length = 1218 Score = 48.1 bits (24), Expect = 0.030 Identities = 42/48 (87%) Strand = Plus / Plus Query: 238 gtgcccgcggtgcgactcggccaacaccaagttctgctactacaacaa 285 |||||| || |||||||| |||||||||||| |||||||||||||| Sbjct: 228 gtgcccacgctgcgactccaacaacaccaagttttgctactacaacaa 275
>gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01, complete sequence Length = 53923 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 245 cggtgcgactcggccaacaccaagttctgctactacaacaacta 288 ||||| ||||| | ||| ||||||||||| |||||||||||||| Sbjct: 38427 cggtgtgactctgacaataccaagttctgttactacaacaacta 38384
>ref|NM_125413.3| Arabidopsis thaliana DNA binding / transcription factor AT5G60200 mRNA, complete cds Length = 1449 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| ||||| || |||||||||||||||| ||| | ||||| ||| |||||||||| Sbjct: 293 aacacaaagttttgttactacaacaactacagtctcactcagcctcgctacttctgcaa 351
>ref|NM_125637.2| Arabidopsis thaliana CDF1 (CYCLING DOF FACTOR 1); DNA binding / transcription factor AT5G62430 (CDF1) mRNA, complete cds Length = 1083 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 |||||||| |||||||||||||||||| Sbjct: 176 aagttctgttactacaacaactacaac 202
>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE Length = 243542 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 272 tgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||||||||||||||||||| || ||||| || ||||||||||| Sbjct: 51160 tgctactacaacaactacaacgtcaaacagcctcgacacttctgcaa 51206
>ref|XM_760276.1| Theileria parva strain Muguga hypothetical protein (TP02_0802) partial mRNA Length = 5322 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 271 ctgctactacaacaactacaacctctc 297 |||||||||||||||||||||| |||| Sbjct: 4685 ctgctactacaacaactacaacttctc 4711
>ref|XM_761649.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_1221) partial mRNA Length = 5451 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 271 ctgctactacaacaactacaacctctc 297 |||||||||||||||||||||| |||| Sbjct: 4814 ctgctactacaacaactacaacttctc 4840
>gb|AY143830.1| Arabidopsis thaliana At5g62430/K19B1_4 mRNA, complete cds Length = 714 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 |||||||| |||||||||||||||||| Sbjct: 10 aagttctgttactacaacaactacaac 36
>emb|CR936946.2| Medicago truncatula chromosome 5 clone mth2-77l22, COMPLETE SEQUENCE Length = 115705 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 258 ccaacaccaagttctgctactacaacaacta 288 ||||||| || |||||||||||||||||||| Sbjct: 106945 ccaacacaaaattctgctactacaacaacta 106915
>emb|CR931741.1| Medicago truncatula chromosome 5 clone mte1-54m21, COMPLETE SEQUENCE Length = 123541 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 258 ccaacaccaagttctgctactacaacaacta 288 ||||||| || |||||||||||||||||||| Sbjct: 122809 ccaacacaaaattctgctactacaacaacta 122839
>gb|AF446362.1|AF446362 Arabidopsis thaliana AT5g62430/K19B1_4 mRNA, complete cds Length = 1086 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 |||||||| |||||||||||||||||| Sbjct: 176 aagttctgttactacaacaactacaac 202
>dbj|AB231333.1| Arabidopsis thaliana CDF1 mRNA for cyclic dof factor 1, complete cds Length = 923 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaac 292 |||||||| |||||||||||||||||| Sbjct: 193 aagttctgttactacaacaactacaac 219
>emb|BX832171.1|CNS09YRZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZC10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1395 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| ||||| || |||||||||||||||| ||| | ||||| ||| |||||||||| Sbjct: 234 aacacaaagttttgttactacaacaactacagtctcactcagcctcgctacttctgcaa 292
>gb|BT005866.1| Arabidopsis thaliana At5g60200 gene, complete cds Length = 774 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| ||||| || |||||||||||||||| ||| | ||||| ||| |||||||||| Sbjct: 190 aacacaaagttttgttactacaacaactacagtctcactcagcctcgctacttctgcaa 248
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 280 caacaactacaacctctcgcagccgcg 306 |||||||||| |||||||||||||||| Sbjct: 61510 caacaactaccacctctcgcagccgcg 61536
>gb|AY086054.1| Arabidopsis thaliana clone 20852 mRNA, complete sequence Length = 1129 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| ||||| || |||||||||||||||| ||| | ||||| ||| |||||||||| Sbjct: 288 aacacaaagttttgttactacaacaactacagtctcactcagcctcgctacttctgcaa 346
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 266 aagttctgctactacaacaactacaac 292 |||||||| |||||||||||||||||| Sbjct: 9716 aagttctgttactacaacaactacaac 9690
>dbj|AB026632.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F15L12 Length = 54987 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgcaa 318 ||||| ||||| || |||||||||||||||| ||| | ||||| ||| |||||||||| Sbjct: 26939 aacacaaagttttgttactacaacaactacagtctcactcagcctcgctacttctgcaa 26997
>dbj|AK100934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136E13, full insert sequence Length = 1525 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 280 caacaactacaacctctcgcagccgcg 306 |||||||||| |||||||||||||||| Sbjct: 1126 caacaactaccacctctcgcagccgcg 1152
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 260 aacaccaagttctgctactacaacaactaca 290 ||||| |||||||| |||||||||||||||| Sbjct: 30670 aacacaaagttctgttactacaacaactaca 30700
>ref|NM_114618.2| Arabidopsis thaliana DNA binding / transcription factor AT3G47500 mRNA, complete cds Length = 1716 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaac 292 ||||||||||| || ||||||||||||||| Sbjct: 451 accaagttctgttattacaacaactacaac 480
>ref|NM_106562.1| Arabidopsis thaliana unknown protein AT1G79110 transcript variant AT1G79110.1 mRNA, complete cds Length = 1210 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 ctgctactacaacaactacaac 292 |||||||||||||||||||||| Sbjct: 405 ctgctactacaacaactacaac 426
>ref|NM_202445.1| Arabidopsis thaliana unknown protein AT1G79110 transcript variant AT1G79110.2 mRNA, complete cds Length = 1345 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 ctgctactacaacaactacaac 292 |||||||||||||||||||||| Sbjct: 536 ctgctactacaacaactacaac 557
>ref|NM_123328.2| Arabidopsis thaliana DNA binding / transcription factor AT5G39660 transcript variant AT5G39660.2 mRNA, complete cds Length = 1692 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaacta 288 ||||||||||| |||||||||||||| Sbjct: 636 accaagttctgttactacaacaacta 661
>ref|NM_180775.2| Arabidopsis thaliana DNA binding / transcription factor AT5G39660 transcript variant AT5G39660.1 mRNA, complete cds Length = 1906 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaacta 288 ||||||||||| |||||||||||||| Sbjct: 663 accaagttctgttactacaacaacta 688
>ref|NM_188100.1| Oryza sativa (japonica cultivar-group), Ozsa8532 predicted mRNA Length = 1365 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 aagttctgctactacaacaactacaa 291 ||||||||||||| |||||||||||| Sbjct: 265 aagttctgctacttcaacaactacaa 290
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 472 cggctgcagtgctggcagctca 493 |||||||||||||||||||||| Sbjct: 1403275 cggctgcagtgctggcagctca 1403254
>gb|BT015791.1| Arabidopsis thaliana At5g39660 mRNA, complete cds Length = 1374 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaacta 288 ||||||||||| |||||||||||||| Sbjct: 442 accaagttctgttactacaacaacta 467
>ref|XM_838359.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1276) partial mRNA Length = 1599 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 472 cggctgcagtgctggcagctca 493 |||||||||||||||||||||| Sbjct: 1379 cggctgcagtgctggcagctca 1400
>gb|AC126019.16| Medicago truncatula clone mth2-22p22, complete sequence Length = 130044 Score = 44.1 bits (22), Expect = 0.47 Identities = 52/62 (83%) Strand = Plus / Minus Query: 258 ccaacaccaagttctgctactacaacaactacaacctctcgcagccgcgccacttctgca 317 ||||||| || || ||||||| ||||||||||| ||||| ||||| | |||||||||| Sbjct: 127328 ccaacacaaaattttgctacttcaacaactacagtctctctcagcccagacacttctgca 127269 Query: 318 ag 319 || Sbjct: 127268 ag 127267
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 263 accaagttctgctactacaacaactacaac 292 ||||||||||| || ||||||||||||||| Sbjct: 18613 accaagttctgttattacaacaactacaac 18584
>gb|AY128757.1| Arabidopsis thaliana H-protein promoter binding factor-2a (At3g47500) mRNA, complete cds Length = 1420 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 accaagttctgctactacaacaactacaac 292 ||||||||||| || ||||||||||||||| Sbjct: 358 accaagttctgttattacaacaactacaac 387 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,961,809 Number of Sequences: 3902068 Number of extensions: 2961809 Number of successful extensions: 74614 Number of sequences better than 10.0: 321 Number of HSP's better than 10.0 without gapping: 341 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71504 Number of HSP's gapped (non-prelim): 3062 length of query: 537 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 514 effective length of database: 17,143,297,704 effective search space: 8811655019856 effective search space used: 8811655019856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
