ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart25f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_745912.1| Aspergillus fumigatus Af293 3-oxoacyl-acyl-carr... 54 5e-04
2emb|AL807577.1|AFA12H2 Aspergillus fumigatus BAC AFA12F2 54 5e-04
3emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 46 0.11
4gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.45
5gb|DQ115818.1| Cyanobacteria phage AS-1 contig_11 genomic sequence 44 0.45
6emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.45
7gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.45
8gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.8
9ref|NM_031341.1| Rattus norvegicus solute carrier family 7 (cati... 42 1.8
10gb|BC078797.1| Rattus norvegicus cDNA clone IMAGE:7133522, conta... 42 1.8
11gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 1.8
12emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.8
13emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 42 1.8
14dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 42 1.8
15dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 42 1.8
16dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.8
17gb|AF200684.1|AF200684 Rattus norvegicus amino acid transporter ... 42 1.8
18gb|BC091142.1| Rattus norvegicus solute carrier family 7 (cation... 42 1.8
19dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.8
20dbj|AB020520.1| Rattus norvegicus mRNA for y+L amino acid transp... 42 1.8
21gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.1
22gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 7.1
23emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 7.1
24emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.1
25emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 40 7.1
26emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 40 7.1
27emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment ... 40 7.1
28dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.1
29dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, comp... 40 7.1
30gb|AE011795.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.1
31gb|AE012258.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 7.1
32gb|AC025895.9| Homo sapiens, clone RP11-610C20, complete sequence 40 7.1
33dbj|AB207867.1| Escherichia coli transposon Tn2610, complete seq... 40 7.1
34gb|AF261825.2| Salmonella enterica subsp. enterica serovar Typhi... 40 7.1
35gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 7.1
36gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 7.1
37gb|AC112715.4| Homo sapiens BAC clone RP11-370L10 from 2, comple... 40 7.1
38dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.1
39dbj|AB103506.1| Serratia marcescens tnpR, blaTEM, rmtB, orfA gen... 40 7.1
40emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Mu... 40 7.1
41gb|AF071555.1|AF071555 Salmonella typhimurium DT104 antibiotic r... 40 7.1
42gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 7.1
43gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 7.1
44gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.1 
>ref|XM_745912.1| Aspergillus fumigatus Af293 3-oxoacyl-acyl-carrier-protein
           reductase (Afu6g11210) partial mRNA
          Length = 972

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 264 cggcatcggccgcgccagcgcccacca 290
           |||||||||||||||||||||||||||
Sbjct: 201 cggcatcggccgcgccagcgcccacca 227



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 475 ctggacgtcttcttcgcgaacgcggggat 503
           |||||| ||||||||||||| ||||||||
Sbjct: 412 ctggacatcttcttcgcgaatgcggggat 440
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>emb|AL807577.1|AFA12H2 Aspergillus fumigatus BAC AFA12F2
          Length = 79718

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 264   cggcatcggccgcgccagcgcccacca 290
             |||||||||||||||||||||||||||
Sbjct: 62115 cggcatcggccgcgccagcgcccacca 62089



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 475   ctggacgtcttcttcgcgaacgcggggat 503
             |||||| ||||||||||||| ||||||||
Sbjct: 61904 ctggacatcttcttcgcgaatgcggggat 61876
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 411    cgacgccgccgacgaagccgccg 433
              |||||||||||||||||||||||
Sbjct: 228927 cgacgccgccgacgaagccgccg 228949
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 226     ggcaaagtcatcatcgtcgccggcgc 251
               |||||||||||||||||| |||||||
Sbjct: 2107995 ggcaaagtcatcatcgtcaccggcgc 2107970
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>gb|DQ115818.1| Cyanobacteria phage AS-1 contig_11 genomic sequence
          Length = 1732

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 257 ccctcatcggcatcggccgcgccagc 282
           ||||||||| ||||||||||||||||
Sbjct: 619 ccctcatcgccatcggccgcgccagc 644
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>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 226    ggcaaagtcatcatcgtcgccggcgc 251
              |||||||||||||||||| |||||||
Sbjct: 244899 ggcaaagtcatcatcgtcaccggcgc 244874
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 226     ggcaaagtcatcatcgtcgccggcgc 251
               |||||||||||||||||| |||||||
Sbjct: 4113786 ggcaaagtcatcatcgtcaccggcgc 4113811



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 413     acgccgccgacgaagccgccg 433
               |||||||||||||||||||||
Sbjct: 3474310 acgccgccgacgaagccgccg 3474330



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 414     cgccgccgacgaagccgccg 433
               ||||||||||||||||||||
Sbjct: 4727904 cgccgccgacgaagccgccg 4727885
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 228     caaagtcatcatcgtcgccggcgca 252
               |||||||||||||||| ||||||||
Sbjct: 1901307 caaagtcatcatcgtcaccggcgca 1901283



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    cgacgccgccgacgaagccg 430
              ||||||||||||||||||||
Sbjct: 258697 cgacgccgccgacgaagccg 258716
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>ref|NM_031341.1| Rattus norvegicus solute carrier family 7 (cationic amino acid
            transporter, y+ system), member 7 (Slc7a7), mRNA
          Length = 2077

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 253  aactccctcatcggcatcggc 273
            |||||||||||||||||||||
Sbjct: 1525 aactccctcatcggcatcggc 1545
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>gb|BC078797.1| Rattus norvegicus cDNA clone IMAGE:7133522, containing frame-shift
            errors
          Length = 1768

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 253  aactccctcatcggcatcggc 273
            |||||||||||||||||||||
Sbjct: 1190 aactccctcatcggcatcggc 1210
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 264     cggcatcggccgcgccagcgc 284
               |||||||||||||||||||||
Sbjct: 2756436 cggcatcggccgcgccagcgc 2756456
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>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 264   cggcatcggccgcgccagcgc 284
             |||||||||||||||||||||
Sbjct: 36501 cggcatcggccgcgccagcgc 36521
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 264   cggcatcggccgcgccagcgc 284
             |||||||||||||||||||||
Sbjct: 40208 cggcatcggccgcgccagcgc 40228
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 264    cggcatcggccgcgccagcgcccaccaattcgcacgccatggcgc 308
              |||||||||||||||| |||||||   |||||| ||| |||||||
Sbjct: 754650 cggcatcggccgcgcctgcgcccatacattcgcgcgcgatggcgc 754606
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 264     cggcatcggccgcgccagcgcccaccaattcgc 296
               ||||||||| || |||||||| |||||||||||
Sbjct: 1280416 cggcatcggtcgtgccagcgcacaccaattcgc 1280448
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 261     catcggcatcggccgcgccagcgcc 285
               |||||||||||||||||||| ||||
Sbjct: 3021802 catcggcatcggccgcgccatcgcc 3021778
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>gb|AF200684.1|AF200684 Rattus norvegicus amino acid transporter y+LAT1 mRNA, complete cds
          Length = 1553

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 253  aactccctcatcggcatcggc 273
            |||||||||||||||||||||
Sbjct: 1333 aactccctcatcggcatcggc 1353
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>gb|BC091142.1| Rattus norvegicus solute carrier family 7 (cationic amino acid
            transporter, y+ system), member 7, mRNA (cDNA clone
            MGC:108661 IMAGE:7129657), complete cds
          Length = 2018

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 253  aactccctcatcggcatcggc 273
            |||||||||||||||||||||
Sbjct: 1440 aactccctcatcggcatcggc 1460
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 410     tcgacgccgccgacgaagccg 430
               |||||||||||||||||||||
Sbjct: 1373551 tcgacgccgccgacgaagccg 1373571
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>dbj|AB020520.1| Rattus norvegicus mRNA for y+L amino acid transporter 1, complete cds
          Length = 2077

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 253  aactccctcatcggcatcggc 273
            |||||||||||||||||||||
Sbjct: 1525 aactccctcatcggcatcggc 1545
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 266     gcatcggccgcgccagcgcc 285
               ||||||||||||||||||||
Sbjct: 2573382 gcatcggccgcgccagcgcc 2573401
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 295     gcacgccatggcgcccgcgc 314
               ||||||||||||||||||||
Sbjct: 2172897 gcacgccatggcgcccgcgc 2172878
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 505     agcagcggcaaggtgttctg 524
               ||||||||||||||||||||
Sbjct: 1884828 agcagcggcaaggtgttctg 1884847
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 118    gcggcgcgcagcaaggagctgtcc 141
              |||||||||||||||| |||||||
Sbjct: 177421 gcggcgcgcagcaaggcgctgtcc 177444
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   gcggcgcgcagcaaggagctgtcc 141
             |||||||||||||||| |||||||
Sbjct: 60698 gcggcgcgcagcaaggcgctgtcc 60675
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 264    cggcatcggccgcgccagcgccca 287
              ||||||||||||||||| ||||||
Sbjct: 151969 cggcatcggccgcgccatcgccca 151946



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   gcggcgcgcagcaaggagctgtcc 141
             |||||||||||||||| |||||||
Sbjct: 53023 gcggcgcgcagcaaggcgctgtcc 53046
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>emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment 16/24
          Length = 294850

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 416   ccgccgacgaagccgccgtgaaag 439
             |||||| |||||||||||||||||
Sbjct: 50869 ccgccgccgaagccgccgtgaaag 50892
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 505     agcagcggcaaggtgttctg 524
               ||||||||||||||||||||
Sbjct: 2543659 agcagcggcaaggtgttctg 2543640
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>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence
          Length = 271577

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 402    gcggcagttcgacgccgccgacgaagccgccg 433
              |||||||||||||||||||  || ||||||||
Sbjct: 245172 gcggcagttcgacgccgcctgcgcagccgccg 245141
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>gb|AE011795.1| Xanthomonas axonopodis pv. citri str. 306,  section 173 of 469 of the
            complete genome
          Length = 11708

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 505  agcagcggcaaggtgttctg 524
            ||||||||||||||||||||
Sbjct: 4023 agcagcggcaaggtgttctg 4042
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>gb|AE012258.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 166
            of 460 of the complete genome
          Length = 7568

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 505  agcagcggcaaggtgttctg 524
            ||||||||||||||||||||
Sbjct: 3844 agcagcggcaaggtgttctg 3863
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>gb|AC025895.9| Homo sapiens, clone RP11-610C20, complete sequence
          Length = 179113

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    acaatgcctacagcaatgcc 104
             ||||||||||||||||||||
Sbjct: 25716 acaatgcctacagcaatgcc 25735
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>dbj|AB207867.1| Escherichia coli transposon Tn2610, complete sequence
          Length = 23883

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 264  cggcatcggccgcgccagcgccca 287
            |||||||| |||||||||||||||
Sbjct: 8687 cggcatcgaccgcgccagcgccca 8664
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>gb|AF261825.2| Salmonella enterica subsp. enterica serovar Typhimurium genomic island
             I, complete sequence
          Length = 47723

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   cggcatcggccgcgccagcgccca 287
             |||||||| |||||||||||||||
Sbjct: 35738 cggcatcgaccgcgccagcgccca 35715
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 505     agcagcggcaaggtgttctg 524
               ||||||||||||||||||||
Sbjct: 3202538 agcagcggcaaggtgttctg 3202519
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 329     actacgacgcctccaacctcgcca 352
               ||||||||||||||| ||||||||
Sbjct: 1730744 actacgacgcctccaccctcgcca 1730721
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>gb|AC112715.4| Homo sapiens BAC clone RP11-370L10 from 2, complete sequence
          Length = 99901

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    acaatgcctacagcaatgcc 104
             ||||||||||||||||||||
Sbjct: 52393 acaatgcctacagcaatgcc 52412
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 410    tcgacgccgccgacgaagccgccg 433
              |||||||||||| |||||||||||
Sbjct: 784503 tcgacgccgccgtcgaagccgccg 784480
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>dbj|AB103506.1| Serratia marcescens tnpR, blaTEM, rmtB, orfA genes for resolvase,
            beta-lactamase TEM-1, 16S rRNA methylase, hypothetical
            protein, partial and complete cds
          Length = 4566

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  cggcatcggccgcgccagcgccca 287
            |||||||| |||||||||||||||
Sbjct: 3949 cggcatcgaccgcgccagcgccca 3972
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>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in
             Acinetobacter baumannii
          Length = 100001

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   cggcatcggccgcgccagcgccca 287
             |||||||| |||||||||||||||
Sbjct: 38316 cggcatcgaccgcgccagcgccca 38293



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   cggcatcggccgcgccagcgccca 287
             |||||||| |||||||||||||||
Sbjct: 33203 cggcatcgaccgcgccagcgccca 33180
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>gb|AF071555.1|AF071555 Salmonella typhimurium DT104 antibiotic resistance gene cluster,
            complete sequence
          Length = 13077

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 264  cggcatcggccgcgccagcgccca 287
            |||||||| |||||||||||||||
Sbjct: 9700 cggcatcgaccgcgccagcgccca 9677
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 505     agcagcggcaaggtgttctg 524
               ||||||||||||||||||||
Sbjct: 2565539 agcagcggcaaggtgttctg 2565520
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     gtcatcatcgtcgccggcgc 251
               ||||||||||||||||||||
Sbjct: 1120505 gtcatcatcgtcgccggcgc 1120486
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gcatcggccgcgccagcgcc 285
              ||||||||||||||||||||
Sbjct: 240578 gcatcggccgcgccagcgcc 240597


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,784,733
Number of Sequences: 3902068
Number of extensions: 2784733
Number of successful extensions: 55062
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52908
Number of HSP's gapped (non-prelim): 2154
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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