ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25e11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 305 bits (154), Expect = 9e-80 Identities = 232/258 (89%) Strand = Plus / Plus Query: 294 atcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtctgcaccgtctac 353 |||||| |||| ||||||||| |||| || |||||||||||||||||||||| ||||| Sbjct: 238 atcgacgtcgagatcaagctcatcgagggagactccgccggcaccgtctgcacaatctac 297 Query: 354 accatctcggaaggaccgtgggaggttcacgacgagatcgacctggagttcctgggcaac 413 || |||||||| || ||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 298 acgatctcggaggggccgtgggagattcacgacgagatcgacctggagttcctcggcaac 357 Query: 414 tccaccggcgagccctacaccctccacaccaacatcttcgccaacggcgtcggcggccgg 473 |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 358 gtcaccggcgagccatacacgctccacaccaacatcttcgccaacggcgtcggcggccgc 417 Query: 474 gagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgtc 533 |||||||||||| |||||||||||||||| | |||| ||||||||||||||||||||| Sbjct: 418 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 477 Query: 534 tggaaaccccagcgcatc 551 ||||| ||| |||||||| Sbjct: 478 tggaaccccaagcgcatc 495
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 252 bits (127), Expect = 1e-63 Identities = 178/195 (91%) Strand = Plus / Plus Query: 357 atctcggaaggaccgtgggaggttcacgacgagatcgacctggagttcctgggcaactcc 416 |||||||| || ||||||||| |||||||||||||||||||||||||||| |||||| | Sbjct: 29135 atctcggaggggccgtgggagattcacgacgagatcgacctggagttcctcggcaacgtc 29194 Query: 417 accggcgagccctacaccctccacaccaacatcttcgccaacggcgtcggcggccgggag 476 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 29195 accggcgagccatacacgctccacaccaacatcttcgccaacggcgtcggcggccgcgag 29254 Query: 477 cagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgtctgg 536 ||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||| Sbjct: 29255 cagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtctgg 29314 Query: 537 aaaccccagcgcatc 551 || ||| |||||||| Sbjct: 29315 aaccccaagcgcatc 29329 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 470 ccgggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccat 529 |||||||||||||||| | |||||||||||||||| | |||| | ||||| |||| |||| Sbjct: 32624 ccgggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccat 32565 Query: 530 cgtctggaaacccc 543 | ||||||| |||| Sbjct: 32564 cctctggaaccccc 32551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 294 atcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtctgcac 346 |||||| |||| ||||||||| |||| || |||||||||||||||||||||| Sbjct: 28883 atcgacgtcgagatcaagctcatcgagggagactccgccggcaccgtctgcac 28935 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 32713 cacgacgagatcgacttcgagttcctggg 32685
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 252 bits (127), Expect = 1e-63 Identities = 178/195 (91%) Strand = Plus / Plus Query: 357 atctcggaaggaccgtgggaggttcacgacgagatcgacctggagttcctgggcaactcc 416 |||||||| || ||||||||| |||||||||||||||||||||||||||| |||||| | Sbjct: 30553427 atctcggaggggccgtgggagattcacgacgagatcgacctggagttcctcggcaacgtc 30553486 Query: 417 accggcgagccctacaccctccacaccaacatcttcgccaacggcgtcggcggccgggag 476 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30553487 accggcgagccatacacgctccacaccaacatcttcgccaacggcgtcggcggccgcgag 30553546 Query: 477 cagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgtctgg 536 ||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||| Sbjct: 30553547 cagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtctgg 30553606 Query: 537 aaaccccagcgcatc 551 || ||| |||||||| Sbjct: 30553607 aaccccaagcgcatc 30553621 Score = 121 bits (61), Expect = 3e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 393 gacctggagttcctgggcaactccaccggcgagccctacaccctccacaccaacatcttc 452 |||||||||||||| |||||| |||||| |||| ||||| || ||||||||| ||||| Sbjct: 30517012 gacctggagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgtcttc 30516953 Query: 453 gccaacggcgtcggcggccgggagcagcagttcaagctctggttcgaccccagctccgag 512 ||||| ||| ||||||| |||||||||||| | |||||||||||||||| | |||| Sbjct: 30516952 gccaatggcaccggcggcaaagagcagcagttccacctctggttcgaccccaccaccgac 30516893 Query: 513 taccacacctactccatcgtctgga 537 | ||||||||||||||||||||||| Sbjct: 30516892 ttccacacctactccatcgtctgga 30516868 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||||||||||||||||||||| |||||| | || |||||||| || Sbjct: 30508420 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 30508361 Query: 441 accaacatcttcgccaacggcgtcggcggccgggag 476 ||||||||||| |||||||||| |||||| ||||| Sbjct: 30508360 accaacatctttgccaacggcgaaggcggcagggag 30508325 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 470 ccgggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccat 529 |||||||||||||||| | |||||||||||||||| | |||| | ||||| |||| |||| Sbjct: 30556916 ccgggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccat 30556857 Query: 530 cgtctggaaacccc 543 | ||||||| |||| Sbjct: 30556856 cctctggaaccccc 30556843 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 294 atcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtctgcac 346 |||||| |||| ||||||||| |||| || |||||||||||||||||||||| Sbjct: 30553175 atcgacgtcgagatcaagctcatcgagggagactccgccggcaccgtctgcac 30553227 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 294 atcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||| |||||||||||||||| | | ||||||||||||||||| Sbjct: 30508618 atcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtc 30508571 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 385 acgagatcgacctggagttcctgggcaactccaccggcgagcc 427 ||||| ||||| | ||||||||||||||| |||||||||||| Sbjct: 32180425 acgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 32180467 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 30557005 cacgacgagatcgacttcgagttcctggg 30556977 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 457 acggcgtcggcggccgggagcagcagttcaagctctggttcgaccccagctccgagtacc 516 ||||||||||| ||||||||||| || | || ||||||||||||| | |||| | || Sbjct: 32180497 acggcgtcggcaaccgggagcagcgcatcgacctgtggttcgaccccaccgccgacttcc 32180556 Query: 517 acacctac 524 |||||||| Sbjct: 32180557 acacctac 32180564
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 190 bits (96), Expect = 3e-45 Identities = 153/172 (88%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||| | |||||||||||||| || ||| ||||||||||||||||||||| ||| Sbjct: 346 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 405 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 406 accaacatcttcgccaatggcgtcggcggccgcgagcagcagttccgcctctggttcgac 465 Query: 501 cccagctccgagtaccacacctactccatcgtctggaaaccccagcgcatca 552 |||| | |||| | |||||||||||||||||||||||| ||| ||| ||||| Sbjct: 466 cccaccgccgacttccacacctactccatcgtctggaaccccaagcacatca 517 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 290 ccgcatcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||| ||||| ||||||| | |||||||| ||||||||||||||||||| Sbjct: 252 ccgcttcgacgtcgacatgatgctcgtcgccaacaactccgccggcaccgtc 303
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 190 bits (96), Expect = 3e-45 Identities = 153/172 (88%) Strand = Plus / Minus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||| | |||||||||||||| || ||| ||||||||||||||||||||| ||| Sbjct: 8379000 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 8378941 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 8378940 accaacatcttcgccaatggcgtcggcggccgcgagcagcagttccgcctctggttcgac 8378881 Query: 501 cccagctccgagtaccacacctactccatcgtctggaaaccccagcgcatca 552 |||| | |||| | |||||||||||||||||||||||| ||| ||| ||||| Sbjct: 8378880 cccaccgccgacttccacacctactccatcgtctggaaccccaagcacatca 8378829 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||| ||||| |||||| |||| |||||||| |||||||| |||||||| ||| Sbjct: 8482431 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 8482490 Query: 441 ac 442 || Sbjct: 8482491 ac 8482492 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||| ||||||||||||||||||||| Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtc 8321989 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 399 gagttcctgggcaactccaccggcgagccctacaccctccacaccaacatct 450 |||||| |||| ||| ||||||| |||||||||||| | ||||| ||||||| Sbjct: 8488256 gagttcttggggaacaccaccggtgagccctacaccttgcacactaacatct 8488307 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| Sbjct: 8322118 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 8322169 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||| |||||||| Sbjct: 8322026 cacgacgagatcgacatcgagttcatgggcaac 8322058 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 ccatggcgccagcattgccttgta 84 |||||||| ||||||||||||||| Sbjct: 24613352 ccatggcggcagcattgccttgta 24613329 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 290 ccgcatcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||| ||||| ||||||| | |||||||| ||||||||||||||||||| Sbjct: 8379205 ccgcttcgacgtcgacatgatgctcgtcgccaacaactccgccggcaccgtc 8379154
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 190 bits (96), Expect = 3e-45 Identities = 153/172 (88%) Strand = Plus / Minus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||| | |||||||||||||| || ||| ||||||||||||||||||||| ||| Sbjct: 119109 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 119050 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct: 119049 accaacatcttcgccaatggcgtcggcggccgcgagcagcagttccgcctctggttcgac 118990 Query: 501 cccagctccgagtaccacacctactccatcgtctggaaaccccagcgcatca 552 |||| | |||| | |||||||||||||||||||||||| ||| ||| ||||| Sbjct: 118989 cccaccgccgacttccacacctactccatcgtctggaaccccaagcacatca 118938 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||| ||||||||||||||||||||| Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtc 62098 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| Sbjct: 62227 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 62278 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||| |||||||| Sbjct: 62135 cacgacgagatcgacatcgagttcatgggcaac 62167 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 290 ccgcatcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||| ||||| ||||||| | |||||||| ||||||||||||||||||| Sbjct: 119314 ccgcttcgacgtcgacatgatgctcgtcgccaacaactccgccggcaccgtc 119263
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 127 bits (64), Expect = 4e-26 Identities = 190/232 (81%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtctgcaccgtctacaccatctcggaa 365 ||||||||||||| ||||||||||||||| ||| |||| |||| ||| |||||| Sbjct: 217 atcaagctcgtcgccaacaactccgccggcacggtcaccacctgctacttcatgtcggaa 276 Query: 366 ggaccgtgggaggttcacgacgagatcgacctggagttcctgggcaactccaccggcgag 425 || |||||| | ||||| ||| | |||||||||||||| |||||| |||||| || Sbjct: 277 ggggagtgggatatccacgatgaggtggacctggagttcctcggcaacgtcaccgggcag 336 Query: 426 ccctacaccctccacaccaacatcttcgccaacggcgtcggcggccgggagcagcagttc 485 || ||||| || ||||||||| |||||||||| ||| ||||||| |||||||||||| Sbjct: 337 ccgtacacgctgcacaccaacgtcttcgccaatggcaccggcggcaaagagcagcagttc 396 Query: 486 aagctctggttcgaccccagctccgagtaccacacctactccatcgtctgga 537 | |||||||||||||||| | |||| | ||||||||||||||||||||||| Sbjct: 397 cacctctggttcgaccccaccaccgacttccacacctactccatcgtctgga 448
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 127 bits (64), Expect = 4e-26 Identities = 190/232 (81%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtctgcaccgtctacaccatctcggaa 365 ||||||||||||| ||||||||||||||| ||| |||| |||| ||| |||||| Sbjct: 289 atcaagctcgtcgccaacaactccgccggcacggtcaccacctgctacttcatgtcggaa 348 Query: 366 ggaccgtgggaggttcacgacgagatcgacctggagttcctgggcaactccaccggcgag 425 || |||||| | ||||| ||| | |||||||||||||| |||||| |||||| || Sbjct: 349 ggggagtgggatatccacgatgaggtggacctggagttcctcggcaacgtcaccgggcag 408 Query: 426 ccctacaccctccacaccaacatcttcgccaacggcgtcggcggccgggagcagcagttc 485 || ||||| || ||||||||| |||||||||| ||| ||||||| |||||||||||| Sbjct: 409 ccgtacacgctgcacaccaacgtcttcgccaatggcaccggcggcaaagagcagcagttc 468 Query: 486 aagctctggttcgaccccagctccgagtaccacacctactccatcgtctgga 537 | |||||||||||||||| | |||| | ||||||||||||||||||||||| Sbjct: 469 cacctctggttcgaccccaccaccgacttccacacctactccatcgtctgga 520
>ref|XM_465430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 862 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 373 gggaggttcacgacgagatcgacctggagttcctgggcaactccaccggcgagccctaca 432 ||||| ||||||||||||||| ||| |||||||| |||||| ||||||| |||| |||| Sbjct: 398 gggagattcacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccataca 457 Query: 433 ccctccacaccaacatcttcgccaacggcgtcggcggccgggagcagcagt 483 | |||||| |||||||||||||||||||||||||| |||| |||||||||| Sbjct: 458 cgctccacgccaacatcttcgccaacggcgtcggcagccgcgagcagcagt 508
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 373 gggaggttcacgacgagatcgacctggagttcctgggcaactccaccggcgagccctaca 432 ||||| ||||||||||||||| ||| |||||||| |||||| ||||||| |||| |||| Sbjct: 15085610 gggagattcacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccataca 15085669 Query: 433 ccctccacaccaacatcttcgccaacggcgtcggcggccgggagcagcagt 483 | |||||| |||||||||||||||||||||||||| |||| |||||||||| Sbjct: 15085670 cgctccacgccaacatcttcgccaacggcgtcggcagccgcgagcagcagt 15085720 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||| ||||| | ||||||||| ||||| Sbjct: 10359114 cacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatccac 10359173 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||| ||| ||||||||||||||||| | |||| ||||||||||| ||||||||| Sbjct: 10359174 accaacgtctacgccaacggcgtcggcgacaaggagatgcagttcaagccgtggttcgac 10359233 Query: 501 ccca 504 |||| Sbjct: 10359234 ccca 10359237 Score = 79.8 bits (40), Expect = 9e-12 Identities = 103/124 (83%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | |||||| | |||||| |||||| | ||||||||| ||||| Sbjct: 10363968 cacgacgagatcgactttgagttcttaggcaacgagaccggccaaccctacaccatccac 10364027 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||||||| ||||| |||||||||| | |||| ||||||||||| |||||| || Sbjct: 10364028 accaacatctatgccaatggcgtcggcgacaaggagatgcagttcaagccgtggttcaac 10364087 Query: 501 ccca 504 |||| Sbjct: 10364088 ccca 10364091 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 10358916 ggcaactccgccggcaccgtc 10358936 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 atgtaccatttcgtccgcat 295 |||||||||||||||||||| Sbjct: 31955997 atgtaccatttcgtccgcat 31956016
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 373 gggaggttcacgacgagatcgacctggagttcctgggcaactccaccggcgagccctaca 432 ||||| ||||||||||||||| ||| |||||||| |||||| ||||||| |||| |||| Sbjct: 91391 gggagattcacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccataca 91450 Query: 433 ccctccacaccaacatcttcgccaacggcgtcggcggccgggagcagcagt 483 | |||||| |||||||||||||||||||||||||| |||| |||||||||| Sbjct: 91451 cgctccacgccaacatcttcgccaacggcgtcggcagccgcgagcagcagt 91501
>dbj|AK063216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D12, full insert sequence Length = 862 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 373 gggaggttcacgacgagatcgacctggagttcctgggcaactccaccggcgagccctaca 432 ||||| ||||||||||||||| ||| |||||||| |||||| ||||||| |||| |||| Sbjct: 398 gggagattcacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccataca 457 Query: 433 ccctccacaccaacatcttcgccaacggcgtcggcggccgggagcagcagt 483 | |||||| |||||||||||||||||||||||||| |||| |||||||||| Sbjct: 458 cgctccacgccaacatcttcgccaacggcgtcggcagccgcgagcagcagt 508
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 121 bits (61), Expect = 3e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 393 gacctggagttcctgggcaactccaccggcgagccctacaccctccacaccaacatcttc 452 |||||||||||||| |||||| |||||| |||| ||||| || ||||||||| ||||| Sbjct: 150389 gacctggagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgtcttc 150330 Query: 453 gccaacggcgtcggcggccgggagcagcagttcaagctctggttcgaccccagctccgag 512 ||||| ||| ||||||| |||||||||||| | |||||||||||||||| | |||| Sbjct: 150329 gccaatggcaccggcggcaaagagcagcagttccacctctggttcgaccccaccaccgac 150270 Query: 513 taccacacctactccatcgtctgga 537 | ||||||||||||||||||||||| Sbjct: 150269 ttccacacctactccatcgtctgga 150245 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||||||||||||||||||||| |||||| | || |||||||| || Sbjct: 141797 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 141738 Query: 441 accaacatcttcgccaacggcgtcggcggccgggag 476 ||||||||||| |||||||||| |||||| ||||| Sbjct: 141737 accaacatctttgccaacggcgaaggcggcagggag 141702 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 294 atcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||| |||||||||||||||| | | ||||||||||||||||| Sbjct: 141995 atcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtc 141948
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 119 bits (60), Expect = 1e-23 Identities = 189/232 (81%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtctgcaccgtctacaccatctcggaa 365 ||||||||||||| ||||||||||||||| ||| |||| |||| ||| |||||| Sbjct: 307 atcaagctcgtcgccaacaactccgccggcacggtcaccacctgctacttcatgtcggaa 366 Query: 366 ggaccgtgggaggttcacgacgagatcgacctggagttcctgggcaactccaccggcgag 425 || |||||| | ||||| ||| | |||||||||||||| |||||| |||||| || Sbjct: 367 ggggagtgggatatccacgatgaggtggacctggagttcctcggcaacgtcaccgggcag 426 Query: 426 ccctacaccctccacaccaacatcttcgccaacggcgtcggcggccgggagcagcagttc 485 || ||||| || ||||||||| |||||||||| ||| ||| ||| |||||||||||| Sbjct: 427 ccgtacacgctgcacaccaacgtcttcgccaatggcaccgggggcaaagagcagcagttc 486 Query: 486 aagctctggttcgaccccagctccgagtaccacacctactccatcgtctgga 537 | |||||||||||||||| | |||| | ||||||||||||||||||||||| Sbjct: 487 cacctctggttcgaccccaccaccgacttccacacctactccatcgtctgga 538
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctacaccttccac 13230461 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||| |||||||| ||||||||||| |||| ||| ||||||| | |||||||||| Sbjct: 13230462 accaacgtcttcgccgacggcgtcggcagccgcgagatgcagttccgcccctggttcgac 13230521 Query: 501 cccagctccgagtaccacacctactccatcgtctggaa 538 |||| | || ||||||| |||| ||||| ||||||| Sbjct: 13230522 cccaccgacggctaccacaactacaccatcttctggaa 13230559 Score = 83.8 bits (42), Expect = 6e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||| | ||| | ||||||||||||||| | ||||||||| ||| || ||| Sbjct: 28754714 cacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgcac 28754773 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||||||||| | ||||| |||| || |||||||||||| ||||||||||||| Sbjct: 28754774 accaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcgac 28754833 Query: 501 cccagctccgagtaccacacctactccatcgtctggaa 538 |||| | |||| | |||||||||||||||| ||||||| Sbjct: 28754834 cccaccgccgacttccacacctactccatcctctggaa 28754871 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||| ||| | | ||||||||| ||||| | ||| Sbjct: 28761710 cacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcac 28761769 Query: 441 accaac 446 |||||| Sbjct: 28761770 accaac 28761775 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||| ||||||||| | ||||||||||| ||| ||||||||||| ||||| || ||| Sbjct: 28749974 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 28750033 Query: 441 accaac 446 |||||| Sbjct: 28750034 accaac 28750039 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 28761551 atcaagctcgtccccggcaactccgccggcaccgtc 28761586 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 28749771 atcaagctcgtccccggcaactccgccggcaccgtc 28749806 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 307 tcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||| ||||||||||||||||||||| Sbjct: 28773895 tcaagctcgtccccggcaactccgccggcaccgtc 28773861 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 515 ccacacctactccatcgtctggaaaccccagcgcatca 552 |||||||||||||||| ||||||| ||| ||| ||||| Sbjct: 28773618 ccacacctactccatcctctggaaccccaagcacatca 28773581 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaa 538 |||||||||||||||| ||||||| Sbjct: 28750108 ccacacctactccatcatctggaa 28750131
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctacaccttccac 147649 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||| |||||||| ||||||||||| |||| ||| ||||||| | |||||||||| Sbjct: 147650 accaacgtcttcgccgacggcgtcggcagccgcgagatgcagttccgcccctggttcgac 147709 Query: 501 cccagctccgagtaccacacctactccatcgtctggaa 538 |||| | || ||||||| |||| ||||| ||||||| Sbjct: 147710 cccaccgacggctaccacaactacaccatcttctggaa 147747
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctacaccttccac 702 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||| |||||||| ||||||||||| |||| ||| ||||||| | |||||||||| Sbjct: 703 accaacgtcttcgccgacggcgtcggcagccgcgagatgcagttccgcccctggttcgac 762 Query: 501 cccagctccgagtaccacacctactccatcgtctggaa 538 |||| | || ||||||| |||| ||||| ||||||| Sbjct: 763 cccaccgacggctaccacaactacaccatcttctggaa 800
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 107 bits (54), Expect = 4e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 |||||| |||||||| | ||||||||||||||| ||| |||||||||||||| || ||| Sbjct: 412 cacgacaagatcgacttcgagttcctgggcaacgtcacgggcgagccctacacgctgcac 471 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||| |||||||||| || ||| |||||||||||||||| ||||||||||||| Sbjct: 472 accaacgtcttcgccaaggggcagggcaagcgggagcagcagttcaggctctggttcgac 531 Query: 501 cccagctccgagtaccacacctactccatcgtctggaa 538 |||| | | | |||||| ||||||||||||||||| Sbjct: 532 cccaccaaggcattccacacatactccatcgtctggaa 569
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||| ||||| | ||||||||| ||||| Sbjct: 1536 cacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatccac 1595 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||| ||| ||||||||||||||||| | |||| ||||||||||| ||||||||| Sbjct: 1596 accaacgtctacgccaacggcgtcggcgacaaggagatgcagttcaagccgtggttcgac 1655 Query: 501 ccca 504 |||| Sbjct: 1656 ccca 1659 Score = 79.8 bits (40), Expect = 9e-12 Identities = 103/124 (83%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | |||||| | |||||| |||||| | ||||||||| ||||| Sbjct: 6390 cacgacgagatcgactttgagttcttaggcaacgagaccggccaaccctacaccatccac 6449 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||||||| ||||| |||||||||| | |||| ||||||||||| |||||| || Sbjct: 6450 accaacatctatgccaatggcgtcggcgacaaggagatgcagttcaagccgtggttcaac 6509 Query: 501 ccca 504 |||| Sbjct: 6510 ccca 6513 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 1338 ggcaactccgccggcaccgtc 1358
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||| ||||| | ||||||||| ||||| Sbjct: 124924 cacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatccac 124983 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||| ||| ||||||||||||||||| | |||| ||||||||||| ||||||||| Sbjct: 124984 accaacgtctacgccaacggcgtcggcgacaaggagatgcagttcaagccgtggttcgac 125043 Query: 501 ccca 504 |||| Sbjct: 125044 ccca 125047 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 124726 ggcaactccgccggcaccgtc 124746
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||||||||||||||||||||| |||||| | || |||||||| || Sbjct: 316 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 375 Query: 441 accaacatcttcgccaacggcgtcggcggccgggag 476 ||||||||||| |||||||||| |||||| ||||| Sbjct: 376 accaacatctttgccaacggcgaaggcggcagggag 411 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 294 atcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||| |||||||||||||||| | | ||||||||||||||||| Sbjct: 229 atcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtc 276
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||||||||||||||||||||| |||||| | || |||||||| || Sbjct: 379 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 438 Query: 441 accaacatcttcgccaacggcgtcggcggccgggag 476 ||||||||||| |||||||||| |||||| ||||| Sbjct: 439 accaacatctttgccaacggcgaaggcggcagggag 474 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 294 atcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||| |||||||||||||||| | | ||||||||||||||||| Sbjct: 292 atcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtc 339
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 85.7 bits (43), Expect = 1e-13 Identities = 132/159 (83%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||| |||||||||||||||||| || ||| Sbjct: 392 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 451 Query: 441 accaacatcttcgc-caacggcgtcggcggccgggagcagcagttcaagctctggttcga 499 |||||| | ||||| || ||| ||| | ||||||||||||||| ||||||||||| Sbjct: 452 accaacgtgttcgcgcaggggcaggggcag-cgggagcagcagttccgcctctggttcga 510 Query: 500 ccccagctccgagtaccacacctactccatcgtctggaa 538 ||||| | | | |||||||||||||||| ||||||| Sbjct: 511 ccccaccaaggccttccacacctactccatcatctggaa 549 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 323 atcaagctcgtccccggcaactccgccggcaccgtc 358
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 85.7 bits (43), Expect = 1e-13 Identities = 132/159 (83%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||| |||||||||||||||||| || ||| Sbjct: 286 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 345 Query: 441 accaacatcttcgc-caacggcgtcggcggccgggagcagcagttcaagctctggttcga 499 |||||| | ||||| || ||| ||| | ||||||||||||||| ||||||||||| Sbjct: 346 accaacgtgttcgcgaaagggcaggggcag-cgggagcagcagttccgcctctggttcga 404 Query: 500 ccccagctccgagtaccacacctactccatcgtctggaa 538 ||||| | | | |||||||||||||||| ||||||| Sbjct: 405 ccccaccaaggccttccacacctactccatcatctggaa 443 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 217 atcaagctcgtccccggcaactccgccggcaccgtc 252
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||| Sbjct: 361 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 420 Query: 441 accaac 446 |||||| Sbjct: 421 accaac 426
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||| Sbjct: 17438276 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 17438335 Query: 441 accaac 446 |||||| Sbjct: 17438336 accaac 17438341 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 492 tggttcgaccccagctccgagtaccacacctactccatcgtctggaa 538 ||||||||||||| | |||| | |||| ||||||||||| ||||||| Sbjct: 20676569 tggttcgaccccaccgccgacttccactcctactccatcctctggaa 20676615
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||| Sbjct: 106500 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 106559 Query: 441 accaac 446 |||||| Sbjct: 106560 accaac 106565
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 83.8 bits (42), Expect = 6e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||| | ||| | ||||||||||||||| | ||||||||| ||| || ||| Sbjct: 62489 cacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgcac 62548 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||||||||| | ||||| |||| || |||||||||||| ||||||||||||| Sbjct: 62549 accaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcgac 62608 Query: 501 cccagctccgagtaccacacctactccatcgtctggaa 538 |||| | |||| | |||||||||||||||| ||||||| Sbjct: 62609 cccaccgccgacttccacacctactccatcctctggaa 62646 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||| ||| | | ||||||||| ||||| | ||| Sbjct: 69485 cacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcac 69544 Query: 441 accaac 446 |||||| Sbjct: 69545 accaac 69550 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||| ||||||||| | ||||||||||| ||| ||||||||||| ||||| || ||| Sbjct: 57749 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 57808 Query: 441 accaac 446 |||||| Sbjct: 57809 accaac 57814 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 69326 atcaagctcgtccccggcaactccgccggcaccgtc 69361 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 57546 atcaagctcgtccccggcaactccgccggcaccgtc 57581 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 307 tcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||| ||||||||||||||||||||| Sbjct: 81670 tcaagctcgtccccggcaactccgccggcaccgtc 81636 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 515 ccacacctactccatcgtctggaaaccccagcgcatca 552 |||||||||||||||| ||||||| ||| ||| ||||| Sbjct: 81393 ccacacctactccatcctctggaaccccaagcacatca 81356 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaa 538 |||||||||||||||| ||||||| Sbjct: 57883 ccacacctactccatcatctggaa 57906
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 83.8 bits (42), Expect = 6e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||| | ||| | ||||||||||||||| | ||||||||| ||| || ||| Sbjct: 155280 cacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgcac 155339 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||||||||| | ||||| |||| || |||||||||||| ||||||||||||| Sbjct: 155340 accaacatcttcagcgacggcaagggcgagcgtgagcagcagttcgtgctctggttcgac 155399 Query: 501 cccagctccgagtaccacacctactccatcgtctggaa 538 |||| | |||| | |||||||||||||||| ||||||| Sbjct: 155400 cccaccgccgacttccacacctactccatcctctggaa 155437 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||| ||| | | ||||||||| ||||| | ||| Sbjct: 162276 cacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcac 162335 Query: 441 accaac 446 |||||| Sbjct: 162336 accaac 162341 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||| ||||||||| | ||||||||||| ||| ||||||||||| ||||| || ||| Sbjct: 150540 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 150599 Query: 441 accaac 446 |||||| Sbjct: 150600 accaac 150605 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 162117 atcaagctcgtccccggcaactccgccggcaccgtc 162152 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 150337 atcaagctcgtccccggcaactccgccggcaccgtc 150372 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaa 538 |||||||||||||||| ||||||| Sbjct: 150674 ccacacctactccatcatctggaa 150697
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||| ||| |||||||||||||||||| || ||| Sbjct: 331 cacgacgagatcgacttcgagttcctgggaaacgtcaccggcgagccctacacgctgcac 390 Query: 441 accaac 446 |||||| Sbjct: 391 accaac 396 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Plus Query: 471 cgggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatc 530 |||||||| |||||| ||||||||||| |||| | ||| | |||||||||||||||| Sbjct: 421 cgggagcaacagttccgcctctggttcgatcccaccaacgacttccacacctactccatc 480 Query: 531 gtctggaa 538 ||||||| Sbjct: 481 ctctggaa 488
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 471 cgggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatc 530 ||||||||||||||| |||||||||||||||| | |||| | |||||||||||||||| Sbjct: 525 cgggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatc 584 Query: 531 gtctggaa 538 ||||||| Sbjct: 585 ctctggaa 592 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||| |||||||||||||||| || ||| Sbjct: 435 cacgacgagatcgacttcgagttcctgggcaacgtgtccggcgagccctacacgctgcac 494 Query: 441 accaac 446 |||||| Sbjct: 495 accaac 500 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 381 ggcaactccgccggcaccgtc 401
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 394 acctggagttcctgggcaactccaccggcgagccctacaccctccacaccaacatcttcg 453 |||||||||||||||||||| |||||| | || |||||||| || ||||||||||| | Sbjct: 236 acctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcataccaacatctttg 177 Query: 454 ccaacggcgtcggcggccgggag 476 ||||||||| |||||| ||||| Sbjct: 176 ccaacggcgaaggcggcagggag 154 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 294 atcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||| |||||||||||||||| | | ||||||||||||||||| Sbjct: 322 atcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtc 275
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||| ||||| |||||| |||| |||||||| |||||||| |||||||| ||| Sbjct: 307 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 366 Query: 441 ac 442 || Sbjct: 367 ac 368
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 470 ccgggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccat 529 |||||||||||||||| | |||||||||||||||| | |||| | ||||| |||| |||| Sbjct: 426 ccgggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccat 485 Query: 530 cgtctggaaacccc 543 | ||||||| |||| Sbjct: 486 cctctggaaccccc 499 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 337 cacgacgagatcgacttcgagttcctggg 365
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||||||||||||||||||||| | |||||||||||||| || ||| Sbjct: 798 cacgacgagatcgacctggagttcctgggcaacgtgtcgggcgagccctacacgctgcac 739 Query: 441 ac 442 || Sbjct: 738 ac 737 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 471 cgggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactcc 527 ||||||||||||||| |||||||||||||||| | |||| | ||||||||||||| Sbjct: 708 cgggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactcc 652
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||| ||||| |||||| |||| |||||||| |||||||| |||||||| ||| Sbjct: 98148 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 98207 Query: 441 ac 442 || Sbjct: 98208 ac 98209
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||| ||||| |||||| |||| |||||||| |||||||| |||||||| ||| Sbjct: 11974 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 12033 Query: 441 ac 442 || Sbjct: 12034 ac 12035 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 399 gagttcctgggcaactccaccggcgagccctacaccctccacaccaacatct 450 |||||| |||| ||| ||||||| |||||||||||| | ||||| ||||||| Sbjct: 17799 gagttcttggggaacaccaccggtgagccctacaccttgcacactaacatct 17850
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 470 ccgggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccat 529 |||||||||||||||| | |||||||||||||||| | |||| | ||||| |||| |||| Sbjct: 494 ccgggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccat 553 Query: 530 cgtctggaaacccc 543 | ||||||| |||| Sbjct: 554 cctctggaaccccc 567 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 405 cacgacgagatcgacttcgagttcctggg 433
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||||||||||||||||||||| | |||||||||||||| || ||| Sbjct: 406 cacgacgagatcgacctggagttcctgggcaacgtgtcgggcgagccctacacgctgcac 465 Query: 441 ac 442 || Sbjct: 466 ac 467 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 471 cgggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactcc 527 ||||||||||||||| |||||||||||||||| | |||| | ||||||||||||| Sbjct: 496 cgggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactcc 552
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 384 gacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccacacc 443 ||||| |||||| | ||||||||||| ||| ||||| ||||||||||||| |||||| Sbjct: 424 gacgaaatcgacttcgagttcctggggaacgagaccggacagccctacaccctgcacacc 483 Query: 444 aacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgacccc 503 ||| ||| |||| ||||||||||| | |||| ||||||| || ||||||||||||| Sbjct: 484 aacgtctacgccgacggcgtcggcaacaaggagatgcagttcgtgccctggttcgacccc 543 Query: 504 a 504 | Sbjct: 544 a 544
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 399 gagttcctgggcaactccaccggcgagccctacaccctccacaccaacatcttcgccaac 458 ||||||||||||||| || ||| |||||||||| | |||| |||||| | | | || | Sbjct: 172 gagttcctgggcaaccgcagcggggagccctacatcatccagaccaacgtgtaccacagc 231 Query: 459 ggcgtcggcggccgggagcagcagttcaagctctggttcgaccccagctccgagtaccac 518 |||||||||||||||||| || | ||||||||||||||||| | |||| | |||| Sbjct: 232 ggcgtcggcggccgggagatgcgccactcgctctggttcgaccccaccgccgacttccac 291 Query: 519 acctactccatcgtctggaa 538 |||||| ||||| ||||||| Sbjct: 292 acctacgccatcctctggaa 311
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctac 431 ||||||||||||||| | |||||| |||||||||||| |||||| |||||| Sbjct: 350 cacgacgagatcgacatcgagttcatgggcaactccagcggcgacccctac 400 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcac 337 ||||||||||| ||||||||||||||||| Sbjct: 281 aagctcgtcgacggcaactccgccggcac 309 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | ||||||||||||||| | |||| | |||||||||| Sbjct: 442 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 493
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggc 422 ||||||||||||||| |||||||| |||||||||||| |||| Sbjct: 253 cacgacgagatcgacatggagttcatgggcaactccagcggc 294
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgt 532 |||||| |||||| | ||||||||||||||| | |||| |||||||||||| ||||| | Sbjct: 489 ggagcaccagttcgacctctggttcgacccctccgccgactaccacacctacaccatcat 548 Query: 533 ctggaa 538 |||||| Sbjct: 549 ctggaa 554 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| |||||||| |||||||| Sbjct: 397 cacgacgagatcgacatggagttcatgggcaac 429 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtct 342 |||||||||||||||||||||| Sbjct: 340 ggcaactccgccggcaccgtct 361
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | |||||||| || ||| | ||||| ||||||||||||| ||| Sbjct: 535 cacgacgagatcgactttgagttcctcgggaacgtctccggccagccctacaccctgcac 594 Query: 441 accaac 446 |||||| Sbjct: 595 accaac 600
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 380 tcacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctcca 439 |||||||||||||||| | ||||||||||||||| ||| ||| | || |||||| |||| Sbjct: 73 tcacgacgagatcgacttcgagttcctgggcaacaccagcgggcaaccttacaccatcca 132 Query: 440 caccaa 445 |||||| Sbjct: 133 caccaa 138
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgt 532 |||||| |||||| | ||||||||||||||| | |||| |||||||||||| ||||| | Sbjct: 514 ggagcaccagttcgacctctggttcgacccctccgccgactaccacacctacaccatcat 573 Query: 533 ctggaa 538 |||||| Sbjct: 574 ctggaa 579 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| |||||||| |||||||| Sbjct: 422 cacgacgagatcgacatggagttcatgggcaac 454 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtct 342 |||||||||||||||||||||| Sbjct: 365 ggcaactccgccggcaccgtct 386
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgt 532 |||||| |||||| | ||||||||||||||| | |||| |||||||||||| ||||| | Sbjct: 485 ggagcaccagttcgacctctggttcgacccctccgccgactaccacacctacaccatcat 544 Query: 533 ctggaa 538 |||||| Sbjct: 545 ctggaa 550 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 383 cgacgagatcgacctggagttcctgggcaactc 415 ||||||||||||| |||||||| |||||||||| Sbjct: 395 cgacgagatcgacatggagttcatgggcaactc 427
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||||||| | ||| ||||||||||| || ||| Sbjct: 417 cacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacgctgcac 476 Query: 441 accaac 446 |||||| Sbjct: 477 accaac 482 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 471 cgggagcagcagttcaagctctggttcgaccc 502 ||||||||||||||| |||||||||||||| Sbjct: 507 cgggagcagcagttccgcctctggttcgaccc 538
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||| ||||||||||||||||||||| Sbjct: 289 aagctcgtcgacggcaactccgccggcaccgtc 321
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||| ||||||||||||||||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtc 304 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctac 431 ||||||||||||||| | |||||| |||||||||| | |||||| |||||| Sbjct: 341 cacgacgagatcgacatcgagttcatgggcaactcgagcggcgacccctac 391 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | ||||||||||||||| | |||| | |||||||||| Sbjct: 433 ggagcaccagttctacctctggttcgacccctccgccgacttccacacctac 484
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | |||||||| || ||| | ||||| |||| |||||| ||||| Sbjct: 449 cacgacgagatcgacttcgagttcctagggaacacatccggccagccatacaccatccac 508 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 ||||||||| |||| | || ||| |||||||||||||||| || ||||||||| Sbjct: 509 gccaacatctacgcccaggggaaaggcaaccgggagcagcagttccgcctgtggttcgac 568 Query: 501 ccca 504 |||| Sbjct: 569 ccca 572
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 383 cgacgagatcgacctggagttcctgggcaactccaccggc 422 ||||||||||||| |||||||| |||||||||||| |||| Sbjct: 419 cgacgagatcgacatggagttcatgggcaactccagcggc 458
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||| ||||||||| | ||||||||||| ||| ||||||||||| ||||| || ||| Sbjct: 280 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 339 Query: 441 accaac 446 |||||| Sbjct: 340 accaac 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 226 ggcaactccgccggcaccgtc 246 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaa 538 |||||||||||||||| ||||||| Sbjct: 414 ccacacctactccatcatctggaa 437
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||||||| ||| ||||||||||||||||| Sbjct: 113308 acatcaagctcgtcgccggcgactccgccggcaccgtc 113345 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 113474 cacgacgagatcgacttcgagttcctggg 113502
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||||||| ||| ||||||||||||||||| Sbjct: 12927 acatcaagctcgtcgccggcgactccgccggcaccgtc 12964 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 13093 cacgacgagatcgacttcgagttcctggg 13121
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgt 532 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| ||||| Sbjct: 457 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 516 Query: 533 ctggaa 538 |||||| Sbjct: 517 ctggaa 522 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 308 ggcaactccgccggcaccgtc 328
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||||||| ||| ||||||||||||||||| Sbjct: 19010110 acatcaagctcgtcgccggcgactccgccggcaccgtc 19010147 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 19010276 cacgacgagatcgacttcgagttcctggg 19010304
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgt 532 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| ||||| Sbjct: 445 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 504 Query: 533 ctggaa 538 |||||| Sbjct: 505 ctggaa 510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 296 ggcaactccgccggcaccgtc 316 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 384 gacgagatcgacctggagttcctgggcaactccaccggcgagccctac 431 |||||||||||| | |||||| |||||||| || |||||| |||||| Sbjct: 356 gacgagatcgacatcgagttcatgggcaacctcagcggcgacccctac 403
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgt 532 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| ||||| Sbjct: 446 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 505 Query: 533 ctggaa 538 |||||| Sbjct: 506 ctggaa 511 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctac 431 ||||||||||||||| | |||||| |||||||| || |||||| |||||| Sbjct: 354 cacgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctac 404 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 297 ggcaactccgccggcaccgtc 317
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctactccatcgt 532 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| ||||| Sbjct: 446 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagatcgt 505 Query: 533 ctggaa 538 |||||| Sbjct: 506 ctggaa 511 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagcccta 430 ||||||||||||||| | |||||| |||||||| || |||||| ||||| Sbjct: 354 cacgacgagatcgacatcgagttcatgggcaacctcagcggcgaccccta 403 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcaactccgccggcaccgtc 341 ||||||||||||||||||||| Sbjct: 297 ggcaactccgccggcaccgtc 317
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| | ||||||||||| ||| | | ||||||||| ||||| | ||| Sbjct: 386 cacgacgagatcgacttcgagttcctggggaacgcgagcggcgagccgtacacggtgcac 445 Query: 441 accaac 446 |||||| Sbjct: 446 accaac 451 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 317 atcaagctcgtccccggcaactccgccggcaccgtc 352
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||| ||||||||| | ||||||||||| ||| ||||||||||| ||||| || ||| Sbjct: 388 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 447 Query: 441 accaac 446 |||||| Sbjct: 448 accaac 453 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 319 atcaagctcgtccccggcaactccgccggcaccgtc 354 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaa 538 |||||||||||||||| ||||||| Sbjct: 522 ccacacctactccatcatctggaa 545
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||||||| ||| ||||||||||||||||| Sbjct: 272 acatcaagctcgtcgccggcgactccgccggcaccgtc 309 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 343 cacgacgagatcgacttcgagttcctggg 371
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||| ||||||||| | ||||||||||| ||| ||||||||||| ||||| || ||| Sbjct: 388 cacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcac 447 Query: 441 accaac 446 |||||| Sbjct: 448 accaac 453 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 306 atcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||||| ||||||||||||||||||||| Sbjct: 319 atcaagctcgtccccggcaactccgccggcaccgtc 354 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaa 538 |||||||||||||||| ||||||| Sbjct: 522 ccacacctactccatcatctggaa 545
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||||||| ||| ||||||||||||||||| Sbjct: 269 acatcaagctcgtcgccggcgactccgccggcaccgtc 306 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 340 cacgacgagatcgacttcgagttcctggg 368
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 52.0 bits (26), Expect = 0.002 Identities = 125/158 (79%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctccac 440 ||||||||||||||| ||||||||||||||| || || ||||||||| ||| || Sbjct: 363 cacgacgagatcgactccgagttcctgggcaaccggacggggcagccctacatcctgcag 422 Query: 441 accaacatcttcgccaacggcgtcggcggccgggagcagcagttcaagctctggttcgac 500 |||||| | ||| || |||| |||| ||| ||||||| | || | |||||||||||| Sbjct: 423 accaacgtgttcaccggcggcaagggcgaccgcgagcagcggatctacctctggttcgac 482 Query: 501 cccagctccgagtaccacacctactccatcgtctggaa 538 |||| | ||||||||| |||||||| || ||||||| Sbjct: 483 cccaccaaggagtaccactcctactccgtcctctggaa 520
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||||||| ||| ||||||||||||||||| Sbjct: 19168759 acatcaagctcgtcgccggcgactccgccggcaccgtc 19168796 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 19168925 cacgacgagatcgacttcgagttcctggg 19168953
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||||||| ||| ||||||||||||||||| Sbjct: 282 acatcaagctcgtcggcggcgactccgccggcaccgtc 319
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||| ||||||||||||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtc 316 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| Sbjct: 445 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 496 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||| |||||||| Sbjct: 353 cacgacgagatcgacatcgagttcatgggcaac 385
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||| ||||||||||||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtc 321 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| Sbjct: 450 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 501 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||| |||||||| Sbjct: 358 cacgacgagatcgacatcgagttcatgggcaac 390
>gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotransglucosylase/hydrolase (XTH1) mRNA, complete cds Length = 849 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 384 gacgagatcgacctggagttcctgggcaa 412 |||||||||||||| |||||||||||||| Sbjct: 295 gacgagatcgacctcgagttcctgggcaa 323
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 380 tcacgacgagatcgacctggagttcctgggcaactccaccggcgagccctacaccctcca 439 |||||||||||| ||| | ||||||||||| ||| | |||||| || |||| |||||| Sbjct: 50 tcacgacgagattgacttcgagttcctggggaacctgagcggcgacccttacatcctcca 109 Query: 440 caccaacatcttc 452 ||||||| ||||| Sbjct: 110 caccaacgtcttc 122
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||| ||||||||||||||||||||| Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtc 312 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| Sbjct: 441 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 492 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||| |||||||| Sbjct: 349 cacgacgagatcgacatcgagttcatgggcaac 381
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||| ||||||||||||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtc 321 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| Sbjct: 450 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 501 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||| |||||||| Sbjct: 358 cacgacgagatcgacatcgagttcatgggcaac 390
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 309 aagctcgtcgaaggcaactccgccggcaccgtc 341 |||||||||| ||||||||||||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtc 316 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 473 ggagcagcagttcaagctctggttcgaccccagctccgagtaccacacctac 524 |||||| |||||| | |||||||||||||||| | |||| | |||||||||| Sbjct: 445 ggagcaccagttctacctctggttcgaccccaccgccgacttccacacctac 496 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||| |||||||| Sbjct: 353 cacgacgagatcgacatcgagttcatgggcaac 385
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| |||||||| |||||||| Sbjct: 436 cacgacgagatcgacatggagttcatgggcaac 468
>ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 399 gagttcctgggcaactccaccggcgagccctacaccctccacaccaacatct 450 |||||| |||| ||| ||||||| |||||||||||| | ||||| ||||||| Sbjct: 331 gagttcttggggaacaccaccggtgagccctacaccttgcacactaacatct 382
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 399 gagttcctgggcaactccaccggcgagccctacaccctccacaccaacatct 450 |||||| |||| ||| ||||||| |||||||||||| | ||||| ||||||| Sbjct: 167 gagttcttggggaacaccaccggtgagccctacaccttgcacactaacatct 218
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 492 tggttcgaccccagctccgagtaccacacctactccatcgtctggaa 538 ||||||||||||| | |||| | |||| ||||||||||| ||||||| Sbjct: 454 tggttcgaccccaccgccgacttccactcctactccatcctctggaa 500
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 492 tggttcgaccccagctccgagtaccacacctactccatcgtctggaa 538 ||||||||||||| | |||| | |||| ||||||||||| ||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaa 592
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 385 acgagatcgacctggagttcctgggcaactccaccggcgagcc 427 ||||| ||||| | ||||||||||||||| |||||||||||| Sbjct: 76114 acgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 76156 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 457 acggcgtcggcggccgggagcagcagttcaagctctggttcgaccccagctccgagtacc 516 ||||||||||| ||||||||||| || | || ||||||||||||| | |||| | || Sbjct: 76186 acggcgtcggcaaccgggagcagcgcatcgacctgtggttcgaccccaccgccgacttcc 76245 Query: 517 acacctac 524 |||||||| Sbjct: 76246 acacctac 76253
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 492 tggttcgaccccagctccgagtaccacacctactccatcgtctggaa 538 ||||||||||||| | |||| | |||| ||||||||||| ||||||| Sbjct: 29319 tggttcgaccccaccgccgacttccactcctactccatcctctggaa 29365
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 307 tcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||| ||||||||||||||||||||| Sbjct: 337 tcaagctcgtccccggcaactccgccggcaccgtc 371 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaa 538 |||||||||||||||| ||||||| Sbjct: 539 ccacacctactccatcctctggaa 562
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 492 tggttcgaccccagctccgagtaccacacctactccatcgtctggaa 538 ||||||||||||| | |||| | |||| ||||||||||| ||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaa 592
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 307 tcaagctcgtcgaaggcaactccgccggcaccgtc 341 ||||||||||| ||||||||||||||||||||| Sbjct: 327 tcaagctcgtccccggcaactccgccggcaccgtc 361 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaaaccccagcgcatca 552 |||||||||||||||| ||||||| ||| ||| ||||| Sbjct: 529 ccacacctactccatcctctggaaccccaagcacatca 566
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 385 acgagatcgacctggagttcctgggcaactccaccggcgagcc 427 ||||| ||||| | ||||||||||||||| |||||||||||| Sbjct: 336 acgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 378 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 457 acggcgtcggcggccgggagcagcagttcaagctctggttcgaccccagctccgagtacc 516 ||||||||||| ||||||||||| || | || ||||||||||||| | |||| | || Sbjct: 408 acggcgtcggcaaccgggagcagcgcatcgacctgtggttcgaccccaccgccgacttcc 467 Query: 517 acacctac 524 |||||||| Sbjct: 468 acacctac 475
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 492 tggttcgaccccagctccgagtaccacacctactccatcgtctggaa 538 ||||||||||||| | |||| | |||| ||||||||||| ||||||| Sbjct: 640 tggttcgaccccaccgccgacttccactcctactccatcctctggaa 686
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 385 acgagatcgacctggagttcctgggcaactccaccggcgagcc 427 ||||| ||||| | ||||||||||||||| |||||||||||| Sbjct: 340 acgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 382 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 457 acggcgtcggcggccgggagcagcagttcaagctctggttcgaccccagctccgagtacc 516 ||||||||||| ||||||||||| || | || ||||||||||||| | |||| | || Sbjct: 412 acggcgtcggcaaccgggagcagcgcatcgacctgtggttcgaccccaccgccgacttcc 471 Query: 517 acacctac 524 |||||||| Sbjct: 472 acacctac 479
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 385 acgagatcgacctggagttcctgggcaactccaccggcgagcc 427 ||||| ||||| | ||||||||||||||| |||||||||||| Sbjct: 31601 acgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 31643 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 457 acggcgtcggcggccgggagcagcagttcaagctctggttcgaccccagctccgagtacc 516 ||||||||||| ||||||||||| || | || ||||||||||||| | |||| | || Sbjct: 31673 acggcgtcggcaaccgggagcagcgcatcgacctgtggttcgaccccaccgccgacttcc 31732 Query: 517 acacctac 524 |||||||| Sbjct: 31733 acacctac 31740
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggcaactccgccggcac 337 ||||||||||||||| ||| ||||||||||||| Sbjct: 321 acatcaagctcgtcggcggcgactccgccggcac 354
>gb|AF205069.1|AF205069 Lycopersicon esculentum xyloglucan endotransglycosylase (BR1) mRNA, partial cds Length = 555 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 515 ccacacctactccatcgtctggaaacccca 544 |||||||||||||||| | ||||||||||| Sbjct: 460 ccacacctactccatcatttggaaacccca 489
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cagcattgccttgtaggtcaa 90 ||||||||||||||||||||| Sbjct: 1001913 cagcattgccttgtaggtcaa 1001933
>gb|AE014234.1| Streptococcus agalactiae 2603V/R section 44 of 100 of the complete genome Length = 20692 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cagcattgccttgtaggtcaa 90 ||||||||||||||||||||| Sbjct: 12817 cagcattgccttgtaggtcaa 12837
>emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complete genome, segment 6 Length = 233050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cagcattgccttgtaggtcaa 90 ||||||||||||||||||||| Sbjct: 15375 cagcattgccttgtaggtcaa 15395
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||||| |||||| Sbjct: 392 cacgacgagatcgactttgagttccttggcaac 424
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctgggcaac 413 ||||||||||||||| | |||||||| |||||| Sbjct: 446 cacgacgagatcgacttcgagttccttggcaac 478
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 399 cacgacgagatcgacttcgagttcctggg 427 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 465 ggcggccgggagcagcagttcaagctctggttcgacccca 504 ||||| ||||||||||||||| | | ||||||||||||| Sbjct: 483 ggcgggcgggagcagcagttccggatgtggttcgacccca 522
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 414 cacgacgagatcgacttcgagttcctggg 442 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 465 ggcggccgggagcagcagttcaagctctggttcgacccca 504 ||||| ||||||||||||||| | | ||||||||||||| Sbjct: 498 ggcgggcgggagcagcagttccggatgtggttcgacccca 537
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 cacgacgagatcgacctggagttcctggg 409 ||||||||||||||| | ||||||||||| Sbjct: 406 cacgacgagatcgacttcgagttcctggg 434 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 465 ggcggccgggagcagcagttcaagctctggttcgacccca 504 ||||| ||||||||||||||| | | ||||||||||||| Sbjct: 490 ggcgggcgggagcagcagttccggatgtggttcgacccca 529
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 472 gggagcagcagttcaagctctggttcgacccca 504 ||||||| |||||| | |||||||||||||||| Sbjct: 427 gggagcaacagttctatctctggttcgacccca 459
>gb|AY023104.1| Oryza sativa microsatellite MRG5429 containing (GAG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 290 ccgcatcgacatcgacatcaagctcgtcgaaggcaactccgccggcaccgtc 341 |||| ||||| ||||||| | |||||||| ||||||||||||||||||| Sbjct: 202 ccgcttcgacgtcgacatgatgctcgtcgccaacaactccgccggcaccgtc 151
>ref|XM_957653.1| Neurospora crassa OR74A hypothetical protein (NCU05658.1) partial mRNA Length = 1938 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aggctgcggctcctgtgcgt 109 |||||||||||||||||||| Sbjct: 813 aggctgcggctcctgtgcgt 794
>ref|XM_325512.1| Neurospora crassa OR74A hypothetical protein (NCU05658.1) partial mRNA Length = 1938 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aggctgcggctcctgtgcgt 109 |||||||||||||||||||| Sbjct: 813 aggctgcggctcctgtgcgt 794
>gb|AC127248.3| Mus musculus BAC clone RP24-442E2 from chromosome 5, complete sequence Length = 176488 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 accacacctactccatcgtc 533 |||||||||||||||||||| Sbjct: 12333 accacacctactccatcgtc 12314
>ref|XM_383787.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03611.1) partial mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 acatcaagctcgtcgaaggc 323 |||||||||||||||||||| Sbjct: 158 acatcaagctcgtcgaaggc 177
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 cggcggccgggagcagcagt 483 |||||||||||||||||||| Sbjct: 56420 cggcggccgggagcagcagt 56439
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 cctacaccctccacaccaac 446 |||||||||||||||||||| Sbjct: 83323 cctacaccctccacaccaac 83304
>gb|AE012449.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 357 of 460 of the complete genome Length = 11450 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 gggagcagcagttcaagctc 491 |||||||||||||||||||| Sbjct: 8826 gggagcagcagttcaagctc 8845
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 450 ttcgccaacggcgtcggcggccgg 473 |||| ||||||||||||||||||| Sbjct: 2231975 ttcgtcaacggcgtcggcggccgg 2231952
>gb|U77658.2|ASU77658 Acinetobacter lwoffii K24 CatR (catR), cic,cis-muconate lactonizing enzyme I (catB), muconolactone isomerase (catC), catechol 1,2-dioxygenase (catA), and CatD (catD) genes, complete cds; and unknown genes Length = 10157 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ggcggacatgtacaaggacatcga 169 |||||||| ||||||||||||||| Sbjct: 6608 ggcggacacgtacaaggacatcga 6631
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggagcagcagttcaagctc 491 |||||||||||||||||||| Sbjct: 1015917 gggagcagcagttcaagctc 1015898
>emb|BX276126.11| Zebrafish DNA sequence from clone CH211-232L22 in linkage group 17, complete sequence Length = 92365 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 cgagagggaggcgctggcgctctc 235 |||| ||||||||||||||||||| Sbjct: 11429 cgagggggaggcgctggcgctctc 11452
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 292 gcatcgacatcgacatcaagctcgtcga 319 |||||||||||||| ||||| ||||||| Sbjct: 8687568 gcatcgacatcgacttcaaggtcgtcga 8687595
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 ccatggcgccagcattgccttgta 84 |||||||| ||||||||||||||| Sbjct: 121612 ccatggcggcagcattgccttgta 121589
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 atgtaccatttcgtccgcat 295 |||||||||||||||||||| Sbjct: 116998 atgtaccatttcgtccgcat 117017
>dbj|AB089795.1| Frateuria sp. ANA-18 aniline-degrading gene clusters (tdnQ, tdnT, tdnA1, tdnA2, tdnB, tdnR, ORF7, catR1, catB1, catC1, catA1, catD, catX), complete and partial cds Length = 14830 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ggcggacatgtacaaggacatcga 169 |||||||| ||||||||||||||| Sbjct: 13439 ggcggacacgtacaaggacatcga 13462
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ccgccggcaccgtctgcacc 347 |||||||||||||||||||| Sbjct: 1691923 ccgccggcaccgtctgcacc 1691904 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ccgccggcaccgtctgcacc 347 |||||||||||||||||||| Sbjct: 1661733 ccgccggcaccgtctgcacc 1661714
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 tcgaccccagctccgagtac 515 |||||||||||||||||||| Sbjct: 134971 tcgaccccagctccgagtac 134952
>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete sequence Length = 248940 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 cctccacaccaacatcttcg 453 |||||||||||||||||||| Sbjct: 220310 cctccacaccaacatcttcg 220329
>dbj|AB009343.1| Frateuria sp. ANA-18 ORFR2, catBI, catCI, catAI and catD genes, complete cds Length = 6342 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ggcggacatgtacaaggacatcga 169 |||||||| ||||||||||||||| Sbjct: 4951 ggcggacacgtacaaggacatcga 4974 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,499,425 Number of Sequences: 3902068 Number of extensions: 3499425 Number of successful extensions: 80506 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 79343 Number of HSP's gapped (non-prelim): 1141 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
