>RETO_ESCCA (P30986) Reticuline oxidase precursor (EC 1.21.3.3)|
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase)
          Length = 538

 Score =  100 bits (249), Expect = 3e-21
 Identities = 49/117 (41%), Positives = 71/117 (60%)
 Frame = +3

Query: 222 IRSARFFTNTTVRPLCVVRPTDASHVQAAVLCGRTQGVRLRVRSGGHDYEGLSYRSVRPE 401
           I++  F  +   +P  ++ P     +   + C R     +R+RSGGH YEGLSY S  P 
Sbjct: 58  IQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTP- 116

Query: 402 VFGVVDLADLRAVSVNQSETTAWVDSGATIGELYYTIAKDNSQLAFPAGLCPTIGVG 572
            F ++DL +L  VS++    TAWV+SG+T+GELYY I + +S+L F AG CPT+G G
Sbjct: 117 -FILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTG 172

>RETO_PAPSO (P93479) Reticuline oxidase precursor (EC 1.21.3.3)|
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase)
          Length = 535

 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 49/112 (43%), Positives = 67/112 (59%)
 Frame = +3

Query: 237 FFTNTTVRPLCVVRPTDASHVQAAVLCGRTQGVRLRVRSGGHDYEGLSYRSVRPEVFGVV 416
           F   T  +P  +V P     + + V C   +   +R+RSGGH YEGLSY +  P  F +V
Sbjct: 67  FAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGGHSYEGLSYTADTP--FVIV 124

Query: 417 DLADLRAVSVNQSETTAWVDSGATIGELYYTIAKDNSQLAFPAGLCPTIGVG 572
           D+ +L  +S++    TAWV+SGAT+GELYY IA+    L F AG CPT+G G
Sbjct: 125 DMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTVGSG 176

>HDNO_ARTOX (P08159) 6-hydroxy-D-nicotine oxidase (EC 1.5.3.6) (6-HDNO)|
          Length = 458

 Score = 36.2 bits (82), Expect = 0.068
 Identities = 28/103 (27%), Positives = 47/103 (45%)
 Frame = +3

Query: 258 RPLCVVRPTDASHVQAAVLCGRTQGVRLRVRSGGHDYEGLSYRSVRPEVFGVVDLADLRA 437
           RP  + R   A  V  +V      G+ + VRSGGH+  G +      +   V+DL  + +
Sbjct: 37  RPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATN----DGGIVLDLRLMNS 92

Query: 438 VSVNQSETTAWVDSGATIGELYYTIAKDNSQLAFPAGLCPTIG 566
           + ++ + + A +  G   G+L    AK    LA   G+ P +G
Sbjct: 93  IHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVG 133

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = -1

Query: 573 RPRRWSGTGRPGTRAGSCPWRWCSTAPRWSRRSRP 469
           RPRRW   GR G RAG+C       A  WS R  P
Sbjct: 147 RPRRWPRAGRRGRRAGACKPSCAGAA--WSARGAP 179

>MCRA_STRLA (P43485) Mitomycin radical oxidase (EC 1.5.3.-)|
          Length = 447

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 24/76 (31%), Positives = 35/76 (46%)
 Frame = +3

Query: 258 RPLCVVRPTDASHVQAAVLCGRTQGVRLRVRSGGHDYEGLSYRSVRPEVFGVVDLADLRA 437
           RP  VV   D   V AAV     Q   + V + GH        SV  +   +V+   +  
Sbjct: 29  RPAYVVEAADEQEVAAAVRLAAEQKRPVGVMATGHG------PSVSADDAVLVNTRRMEG 82

Query: 438 VSVNQSETTAWVDSGA 485
           VSV+ +  TAW+++GA
Sbjct: 83  VSVDAARATAWIEAGA 98

>MPAG4_DACGL (P82946) Major pollen allergen Dac g 4 (Fragments)|
          Length = 55

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 447 NQSETTAWVDSGATIGELYYTI 512
           N+   TAWVDSGA +GEL Y +
Sbjct: 21  NEQARTAWVDSGAQLGELSYGV 42

>MAF_AVIS4 (P23091) Transforming protein Maf|
          Length = 369

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = -2

Query: 308 GGLDVGGVGRPHDAERPHRGVGEESGAPNGGDKHAGEAARALGVQELARYLVP*ALEEVI 129
           GG   GG G       PH G G   G  +  D+ + E    + ++EL R L   + EEVI
Sbjct: 214 GGGGGGGGGGAGGLHHPHHGGGGGGGGLHFDDRFSDEQLVTMSMRELNRQLRGVSKEEVI 273

Query: 128 R 126
           R
Sbjct: 274 R 274

>GHSR_PIG (Q95254) Growth hormone secretagogue receptor type 1 (GHS-R)|
           (GH-releasing peptide receptor) (GHRP) (Ghrelin
           receptor)
          Length = 366

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 160 ILSRKHWRKSSGEAREGTDVR*HEKKLTKSASAKRLSIAIFCF 32
           ++ RK WR+  GEA  G+ +R    K T     K L++ +F F
Sbjct: 234 LIGRKLWRRKRGEAAVGSSLRDQNHKQT----VKMLAVVVFAF 272

>ALL5_APIGR (P81943) Allergen Api g 5 (Fragments)|
          Length = 86

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 426 DLRAVSVNQSETTAWVDSGATIGELYYTI 512
           +L+AV  +    TA V +GAT+GE+YY I
Sbjct: 24  NLKAVIADPVAKTAVVQAGATLGEVYYXI 52

>TGIF_PANTR (Q5IS58) 5'-TG-3'-interacting factor (Homeobox protein TGIF)|
          Length = 401

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 121 PPLMTSSNAYGTRYLASSCT---PRARAASPACLSPPLG 228
           PP + SS A  +  L SSC    P AR   P  LSP LG
Sbjct: 61  PPALWSSLATPSALLGSSCAPPPPPARCPQPRALSPELG 99

>CCD71_BOVIN (Q2HJ91) Coiled-coil domain-containing protein 71|
          Length = 452

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
 Frame = +1

Query: 121 PPLMTSSNAYGTRYLASSCTP--------RARAASPACLSPPLGAPDSS 243
           P ++ S + YG     SSCT         +ARA +PA  SPP  AP ++
Sbjct: 62  PTILRSGDVYGY----SSCTANPPSQTKLQARAPTPAATSPPASAPQTA 106

>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1199

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = -2

Query: 272 DAERPHRGVGEESGAPNGGDKHAGEAARALGVQELARYLVP 150
           +  RP  GV E  G   G    AG AA  L +  LA YLVP
Sbjct: 12  ERRRPPLGVREGRGRTRGCGGPAGAAALGLALLGLALYLVP 52

>KCC2B_HUMAN (Q13554) Calcium/calmodulin-dependent protein kinase type II beta|
           chain (EC 2.7.11.17) (CaM-kinase II beta chain) (CaM
           kinase II beta subunit) (CaMK-II beta subunit)
          Length = 664

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = +1

Query: 172 SCTPRAR----AASPACLSPPLGAPDSSPTPR 255
           S TP A     A  P CLSP L  P SSP+PR
Sbjct: 460 SGTPEAEGPLSAGPPPCLSPALLGPLSSPSPR 491

>GCP6_HUMAN (Q96RT7) Gamma-tubulin complex component 6 (GCP-6)|
          Length = 1819

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +2

Query: 449 SVGDHCLGRLRRDHR----GAVLHHRQGQLPARVPGRPVPDH 562
           S GD C  R  RD R    GA++H R   +  R+   PVPD+
Sbjct: 197 SFGDPCGDRFERDTRVSLFGALVHSRTYDMDVRLGLPPVPDN 238

>Y3208_DESVH (Q726E5) UPF0078 membrane protein DVU3208|
          Length = 327

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -3

Query: 196 LLELWVYRSSLGILSR---KHWRKSSGEAREGTD 104
           +L  W +R ++G LSR   K W+K   +A +GTD
Sbjct: 170 VLVYWSHRENIGRLSRGEEKPWQKKHHDAAQGTD 203

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 121 PPLMTSSNAYGTRYLASSCTPRARAASPACLSPPLGAPDSSPTPR 255
           PP  TSS    TR L+ S +P  R   P+  + P      SPTP+
Sbjct: 372 PPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQ 416


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,674,449
Number of Sequences: 219361
Number of extensions: 1146861
Number of successful extensions: 4523
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4514
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)