>NUP3_PENSQ (P24504) Nuclease PA3 (EC 3.1.3.6) (Endonuclease PA3)|
           (Deoxyribonuclease PA3)
          Length = 270

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
 Frame = +2

Query: 155 WGEEGHYMTCKIAEGFLTGEASAAVKGLLPEWAVGELAAACSWPDAVRRQM--PWSGSLH 328
           WG  GH     +A+ +++ EA++  +G+L   +   LA+  SW D  R      WS SLH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60

Query: 329 FADT----PGDCKFSYARDCHGTKGEKDMCVVGGINNYTAALQDSS-SPYNRTESLLFLS 493
           F D     P +C   Y RDC G+ G    C +  I NYT  + DSS S  N  E+L FL 
Sbjct: 61  FIDAEDNPPTNCNVDYERDC-GSSG----CSISAIANYTQRVSDSSLSSENHAEALRFLV 115

Query: 494 HFLGDIHQPMHCGRTADLGGNTIVVTW 574
           HF+GD+ QP+H    A +GGN I VT+
Sbjct: 116 HFIGDMTQPLHDEAYA-VGGNKINVTF 141

>NUP1_PENCI (P24289) Nuclease P1 (EC 3.1.30.1) (Endonuclease P1)|
           (Deoxyribonuclease P1)
          Length = 270

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
 Frame = +2

Query: 155 WGEEGHYMTCKIAEGFLTGEASAAVKGLLPEWAVGELAAACSWPDAVRRQM--PWSGSLH 328
           WG  GH     +A+ +++ EA++  +G+L   +   LA+  SW D  R      WS SLH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60

Query: 329 FADT----PGDCKFSYARDCHGTKGEKDMCVVGGINNYTAALQDSS-SPYNRTESLLFLS 493
           F D     P +C   Y RDC G+ G    C +  I NYT  + DSS S  N  E+L FL 
Sbjct: 61  FIDAEDNPPTNCNVDYERDC-GSSG----CSISAIANYTQRVSDSSLSSENHAEALRFLV 115

Query: 494 HFLGDIHQPMHCGRTADLGGNTIVVTW 574
           HF+GD+ QP+H    A +GGN I VT+
Sbjct: 116 HFIGDMTQPLHDEAYA-VGGNKINVTF 141

>NUS1_ASPOR (P24021) Nuclease S1 precursor (EC 3.1.30.1) (Endonuclease S1)|
           (Single-stranded-nucleate endonuclease)
           (Deoxyribonuclease S1)
          Length = 287

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
 Frame = +2

Query: 155 WGEEGHYMTCKIAEGFLTGEASAAVKGLLPEWAVGELAAACSWPDAVRRQMP--WSGSLH 328
           WG  GH     IA+ F+     +  + +L + +   LA   +W D  +      +S   H
Sbjct: 21  WGNLGHETVAYIAQSFVASSTESFCQNILGDDSTSYLANVATWADTYKYTDAGEFSKPYH 80

Query: 329 FADT----PGDCKFSYARDCHGTKGEKDMCVVGGINNYTAALQDSSSPYNRTESLLFLSH 496
           F D     P  C   Y RDC G+ G    C +  I NYT  L +S +      +L F+ H
Sbjct: 81  FIDAQDNPPQSCGVDYDRDC-GSAG----CSISAIQNYTNILLESPNGSEALNALKFVVH 135

Query: 497 FLGDIHQPMHCGRTADLGGNTIVVTW 574
            +GDIHQP+H     + GGN I VT+
Sbjct: 136 IIGDIHQPLH-DENLEAGGNGIDVTY 160

>COX11_PONPY (Q5R7U6) Cytochrome c oxidase assembly protein COX11, mitochondrial|
           precursor
          Length = 277

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 309 GIWRRTASGHEHAAASSPTAHSGRSPFTAADASPVRK 199
           G W+R + G  H A   P  H   +PFT A     R+
Sbjct: 54  GTWKRCSLGARHPALQPPRRHKNSNPFTRAQKEEWRR 90

>SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta|
            chain 3) (Beta-IV spectrin)
          Length = 2564

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 19/36 (52%), Positives = 22/36 (61%)
 Frame = -2

Query: 301  APHGVRPRARRRELADGPLRQEPLHRRRRLARQETL 194
            A   VRPR  R+E AD   R E L RRRR  RQE++
Sbjct: 2223 AAEQVRPRPERQESAD---RAEELPRRRRPERQESV 2255

>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum|
           protein MSE55)
          Length = 391

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 449 SSSPYNRTESLLFLSHFLGDIHQPMHCGRTADLGGNT 559
           SSS   R  +   +SH LGD    MH GR  D+ G+T
Sbjct: 25  SSSQGKRRLTADMISHPLGDFRHTMHVGRGGDVFGDT 61

>ALL2_ASPFU (P79017) Major allergen Asp f 2 precursor (Asp f II)|
          Length = 310

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = -3

Query: 357 NLQSPGVSAKCREPDHGIWRRTASGHEHAAASSPTAHSGRSPFTAADASPVRKPSAILQV 178
           ++ +PGV   C    HG  +   +G   A AS+ T+ S     + A  +P   PSA + V
Sbjct: 238 DIAAPGVG--CAGESHGPDQGHDTGSASAPASTSTSSSSSGSGSGATTTPTDSPSATIDV 295

Query: 177 M*WPSSPH 154
              PS+ H
Sbjct: 296 ---PSNCH 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,617,312
Number of Sequences: 219361
Number of extensions: 899070
Number of successful extensions: 3158
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3146
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)