ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart25d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 212 9e-52
2dbj|AP005914.3| Oryza sativa (japonica cultivar-group) genomic D... 212 9e-52
3dbj|AK107404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
4gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 48 0.032
5ref|XM_846395.1| PREDICTED: Canis familiaris similar to CUB and ... 44 0.50
6gb|CP000088.1| Thermobifida fusca YX, complete genome 44 0.50
7gb|DQ275654.1| HIV-1 isolate 03ZAPS086MB1 from South Africa gag ... 44 0.50
8ref|NM_028047.1| Mus musculus RIKEN cDNA 1500002O20 gene (150000... 42 2.0
9gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 2.0
10gb|BC034211.1| Mus musculus RIKEN cDNA 1500002O20 gene, mRNA (cD... 42 2.0
11emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 2.0
12ref|XM_860856.1| PREDICTED: Canis familiaris similar to AT rich ... 42 2.0
13ref|XM_860834.1| PREDICTED: Canis familiaris similar to AT rich ... 42 2.0
14ref|XM_847453.1| PREDICTED: Canis familiaris similar to AT rich ... 42 2.0
15gb|AC159140.10| Mus musculus chromosome 7, clone RP24-84I4, comp... 42 2.0
16emb|AL390765.17| Human DNA sequence from clone RP11-509I1 on chr... 42 2.0
17gb|AC092981.3| Homo sapiens 3 BAC RP11-305I9 (Roswell Park Cance... 42 2.0
18emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 42 2.0
19emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 42 2.0
20dbj|AK141576.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 42 2.0
21gb|AC025842.11| Homo sapiens chromosome 15, clone RP11-31E22, co... 42 2.0
22gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, compl... 42 2.0
23dbj|AK169651.1| Mus musculus 2 days neonate thymus thymic cells ... 42 2.0
24dbj|AK039368.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 42 2.0
25dbj|AK005126.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 42 2.0
26gb|AY029164.1| Mycobacterium microti 2770c gene, complete cds 42 2.0
27dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
28gb|AF335181.1|AF335181 Mycobacterium microti strain OV 254 Rv277... 42 2.0
29gb|AY010119.1| Petromyzon marinus homeodomain protein DlxD (DlxD... 42 2.0
30gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complet... 42 2.0
31dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
32dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
33dbj|AK073410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
34gb|AF051212.1|AF051212 Picea mariana probable 60s ribosomal prot... 42 2.0
35gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, comp... 42 2.0
36gb|M30275.1|QULPROT Quail (C.japonica) protamine mRNA, complete cds 42 2.0
37dbj|AB048759.1| Lampetra japonica mRNA for homeoprotein LjDLX1/6... 42 2.0
38gb|BC052024.1| Mus musculus SRY-box containing gene 3, mRNA (cDN... 40 7.8
39ref|NM_194591.1| Oryza sativa (japonica cultivar-group) putative... 40 7.8
40gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 7.8
41ref|XM_469379.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.8
42ref|NM_186392.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.8
43gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
44gb|BC074138.1| Xenopus laevis hypothetical protein LOC443694, mR... 40 7.8
45ref|XM_599974.2| PREDICTED: Bos taurus similar to SH3 domain pro... 40 7.8
46ref|XM_871682.1| PREDICTED: Bos taurus similar to SH3 domain pro... 40 7.8
47ref|XM_863879.1| PREDICTED: Bos taurus similar to SH3 domain pro... 40 7.8
48gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.8
49ref|NM_011365.2| Mus musculus intersectin 2 (Itsn2), mRNA 40 7.8
50ref|NM_009237.1| Mus musculus SRY-box containing gene 3 (Sox3), ... 40 7.8
51gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, co... 40 7.8
52ref|XM_532890.2| PREDICTED: Canis familiaris similar to intersec... 40 7.8
53ref|XM_853332.1| PREDICTED: Canis familiaris similar to intersec... 40 7.8
54ref|XM_844198.1| PREDICTED: Canis familiaris similar to intersec... 40 7.8
55ref|XM_853259.1| PREDICTED: Canis familiaris similar to intersec... 40 7.8
56ref|XM_853216.1| PREDICTED: Canis familiaris similar to intersec... 40 7.8
57ref|XM_853178.1| PREDICTED: Canis familiaris similar to intersec... 40 7.8
58ref|XM_853134.1| PREDICTED: Canis familiaris similar to intersec... 40 7.8
59ref|XM_853096.1| PREDICTED: Canis familiaris similar to intersec... 40 7.8
60gb|BC063061.1| Mus musculus SRY-box containing gene 3, mRNA (cDN... 40 7.8
61gb|AC158913.4| Mus musculus chromosome 5, clone RP24-268J3, comp... 40 7.8
62ref|NM_006015.3| Homo sapiens AT rich interactive domain 1A (SWI... 40 7.8
63ref|NM_139135.1| Homo sapiens AT rich interactive domain 1A (SWI... 40 7.8
64emb|AL590733.8| Human DNA sequence from clone RP11-193D23 on chr... 40 7.8
65emb|AL512408.12| Human DNA sequence from clone RP5-968P14 on chr... 40 7.8
66gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
67gb|AC074336.14| Mus musculus Strain C57BL6/J chromosome 1 BAC, R... 40 7.8
68emb|X94125.1|MMSOX3 M.musculus SOX3 gene 40 7.8
69emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.8
70emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 7.8
71emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 7.8
72gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosom... 40 7.8
73dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.8
74gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
75dbj|AK163807.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 7.8
76gb|AF434675.1| Mus musculus transcription factor SOX3 (Sox3) gen... 40 7.8
77dbj|AK029325.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 7.8
78dbj|AK042449.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 7.8
79dbj|AK031390.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 7.8
80dbj|AK034367.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 7.8
81gb|BC096018.1| Mus musculus SRY-box containing gene 3, mRNA (cDN... 40 7.8
82dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
83dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
84dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
85gb|AF231056.1|AF231056 Homo sapiens BRG1-Associated Factor 250a ... 40 7.8
86gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.8
87gb|AC007736.3| Homo sapiens BAC clone RP11-15J24 from 2, complet... 40 7.8
88dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
89dbj|AB108674.1| Mus musculus Sox3 mRNA for transcriptional facto... 40 7.8
90gb|AC145691.5| Mus musculus chromosome 1, clone RP24-278B15, com... 40 7.8
91dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
92dbj|AK122480.1| Mus musculus mRNA for mKIAA1256 protein 40 7.8
93dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
94gb|AY112283.1| Zea mays CL19552_1 mRNA sequence 40 7.8
95dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
96gb|AF132480.1|AF132480 Mus musculus Ese2 protein mRNA, complete cds 40 7.8
97gb|AF132479.1|AF132479 Mus musculus Ese2L protein mRNA, complete... 40 7.8
98gb|AC119809.10| Mus musculus chromosome 1, clone RP24-505E24, co... 40 7.8
99gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 7.8
100dbj|AB070348.1| Branchiostoma belcheri Tbr mRNA for T-brain, com... 40 7.8
101dbj|AP002342.3| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 7.8
102gb|AC166124.4| Mus musculus chromosome 1, clone RP23-105N9, comp... 40 7.8
103gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
104gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
105emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118... 40 7.8
106emb|AL807233.10| Mouse DNA sequence from clone RP23-174O19 on ch... 40 7.8
107emb|AL590792.1| Human DNA sequence from clone RP11-416F22 on chr... 40 7.8 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  212 bits (107), Expect = 9e-52
 Identities = 241/285 (84%), Gaps = 3/285 (1%)
 Strand = Plus / Plus

                                                                            
Query: 288      aggaggcgccgccgggctacgtgccgccgatcagccccgaggacgtggcggccgtcgagg 347
                |||| ||||||||||| | ||||||||||||  ||||||  || || || ||||| ||| 
Sbjct: 14613255 aggacgcgccgccggggttcgtgccgccgatgggccccggcgaggtcgccgccgtggagt 14613314

                                                                            
Query: 348      cgctcctcgggtacgagttcaaggacaagtccctggtcagcgaggcccttacgcacggct 407
                |||||||||| |||||||||| ||||||| | |||||    |||||||| ||||||||||
Sbjct: 14613315 cgctcctcggctacgagttcagggacaaggcgctggtggaggaggccctcacgcacggct 14613374

                                                                            
Query: 408      ccttctacctgccctaccgctccggcgactccacctacgagcggctcgagtacctgggcg 467
                ||||||||   ||||||||| ||||||     ||||||||||| ||||| ||||| ||||
Sbjct: 14613375 ccttctactacccctaccgccccggcgtg---acctacgagcgcctcgaatacctcggcg 14613431

                                                                            
Query: 468      acgccgtgctcacctgcctcgtgtcccgggatgtcttcctcacctaccgggacctcccgc 527
                ||||||||||||||||| ||||||| ||||| ||||||||||||||| |  | |||| ||
Sbjct: 14613432 acgccgtgctcacctgcgtcgtgtcgcgggaggtcttcctcacctacggccagctccagc 14613491

                                                             
Query: 528      cgggcccgctcacgcgcctccgcgccgccaacgtcgacaaggaga 572
                ||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 14613492 cgggccccctcacccgcctccgcgccgccaacgtcgataaggaga 14613536
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>dbj|AP005914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0027A16
          Length = 129953

 Score =  212 bits (107), Expect = 9e-52
 Identities = 241/285 (84%), Gaps = 3/285 (1%)
 Strand = Plus / Plus

                                                                         
Query: 288   aggaggcgccgccgggctacgtgccgccgatcagccccgaggacgtggcggccgtcgagg 347
             |||| ||||||||||| | ||||||||||||  ||||||  || || || ||||| ||| 
Sbjct: 67516 aggacgcgccgccggggttcgtgccgccgatgggccccggcgaggtcgccgccgtggagt 67575

                                                                         
Query: 348   cgctcctcgggtacgagttcaaggacaagtccctggtcagcgaggcccttacgcacggct 407
             |||||||||| |||||||||| ||||||| | |||||    |||||||| ||||||||||
Sbjct: 67576 cgctcctcggctacgagttcagggacaaggcgctggtggaggaggccctcacgcacggct 67635

                                                                         
Query: 408   ccttctacctgccctaccgctccggcgactccacctacgagcggctcgagtacctgggcg 467
             ||||||||   ||||||||| ||||||     ||||||||||| ||||| ||||| ||||
Sbjct: 67636 ccttctactacccctaccgccccggcgtg---acctacgagcgcctcgaatacctcggcg 67692

                                                                         
Query: 468   acgccgtgctcacctgcctcgtgtcccgggatgtcttcctcacctaccgggacctcccgc 527
             ||||||||||||||||| ||||||| ||||| ||||||||||||||| |  | |||| ||
Sbjct: 67693 acgccgtgctcacctgcgtcgtgtcgcgggaggtcttcctcacctacggccagctccagc 67752

                                                          
Query: 528   cgggcccgctcacgcgcctccgcgccgccaacgtcgacaaggaga 572
             ||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 67753 cgggccccctcacccgcctccgcgccgccaacgtcgataaggaga 67797
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>dbj|AK107404.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-E01, full
           insert sequence
          Length = 1415

 Score =  204 bits (103), Expect = 2e-49
 Identities = 240/285 (84%), Gaps = 3/285 (1%)
 Strand = Plus / Plus

                                                                       
Query: 288 aggaggcgccgccgggctacgtgccgccgatcagccccgaggacgtggcggccgtcgagg 347
           |||| ||||||||||| | ||||||||||||  ||||||  || || || ||||| ||| 
Sbjct: 147 aggacgcgccgccggggttcgtgccgccgatgggccccggcgaggtcgccgccgtggagt 206

                                                                       
Query: 348 cgctcctcgggtacgagttcaaggacaagtccctggtcagcgaggcccttacgcacggct 407
           |||||||||| |||||||||| ||||||| | |||||    ||||||||  |||||||||
Sbjct: 207 cgctcctcggctacgagttcagggacaaggcgctggtggaggaggccctcccgcacggct 266

                                                                       
Query: 408 ccttctacctgccctaccgctccggcgactccacctacgagcggctcgagtacctgggcg 467
           ||||||||   ||||||||| ||||||     ||||||||||| ||||| ||||| ||||
Sbjct: 267 ccttctactacccctaccgccccggcgtg---acctacgagcgcctcgaatacctcggcg 323

                                                                       
Query: 468 acgccgtgctcacctgcctcgtgtcccgggatgtcttcctcacctaccgggacctcccgc 527
           ||||||||||||||||| ||||||| ||||| ||||||||||||||| |  | |||| ||
Sbjct: 324 acgccgtgctcacctgcgtcgtgtcgcgggaggtcttcctcacctacggccagctccagc 383

                                                        
Query: 528 cgggcccgctcacgcgcctccgcgccgccaacgtcgacaaggaga 572
           ||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 384 cgggccccctcacccgcctccgcgccgccaacgtcgataaggaga 428
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 438     ccacctacgagcggctcgagtacctgggcgacgccgtgct 477
               ||||| |||||||||| || | ||||||||||||||||||
Sbjct: 3332667 ccaccaacgagcggctggaattcctgggcgacgccgtgct 3332628
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>ref|XM_846395.1| PREDICTED: Canis familiaris similar to CUB and Sushi multiple
           domains 2 (LOC609181), mRNA
          Length = 561

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 463 gggcgacgccgtgctcacctgcctcg 488
           |||| |||||||||||||||||||||
Sbjct: 273 gggccacgccgtgctcacctgcctcg 298
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 115     tccttccgtttccgaccgcccc 136
               ||||||||||||||||||||||
Sbjct: 2466223 tccttccgtttccgaccgcccc 2466202
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>gb|DQ275654.1| HIV-1 isolate 03ZAPS086MB1 from South Africa gag protein (gag) gene,
            complete cds; pol protein (pol) gene, partial cds; and
            vif protein (vif), vpr protein (vpr), tat protein (tat),
            rev protein (rev), vpu protein (vpu), envelope
            glycoprotein (env), and nef protein (nef) genes, complete
            cds
          Length = 9086

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 268  gagggagcagcagcagagggag 289
            ||||||||||||||||||||||
Sbjct: 8318 gagggagcagcagcagagggag 8339
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>ref|NM_028047.1| Mus musculus RIKEN cDNA 1500002O20 gene (1500002O20Rik), mRNA
          Length = 2232

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  gatgccgagggagcagcagca 282
            |||||||||||||||||||||
Sbjct: 1832 gatgccgagggagcagcagca 1852
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 222     cgcagccgcagccgccagcag 242
               |||||||||||||||||||||
Sbjct: 3075091 cgcagccgcagccgccagcag 3075111
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>gb|BC034211.1| Mus musculus RIKEN cDNA 1500002O20 gene, mRNA (cDNA clone MGC:37579
            IMAGE:4988361), complete cds
          Length = 2183

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  gatgccgagggagcagcagca 282
            |||||||||||||||||||||
Sbjct: 1747 gatgccgagggagcagcagca 1767
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14
          Length = 307550

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 222    cgcagccgcagccgccagcag 242
              |||||||||||||||||||||
Sbjct: 219442 cgcagccgcagccgccagcag 219462
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>ref|XM_860856.1| PREDICTED: Canis familiaris similar to AT rich interactive domain
           1A (SWI- like) isoform c, transcript variant 3
           (LOC487352), mRNA
          Length = 7836

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 271 ggagcagcagcagagggaggaggcg 295
           ||||||||||||| |||||||||||
Sbjct: 447 ggagcagcagcagcgggaggaggcg 471
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>ref|XM_860834.1| PREDICTED: Canis familiaris similar to AT rich interactive domain
           1A (SWI- like) isoform c, transcript variant 2
           (LOC487352), mRNA
          Length = 7595

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 271 ggagcagcagcagagggaggaggcg 295
           ||||||||||||| |||||||||||
Sbjct: 447 ggagcagcagcagcgggaggaggcg 471
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>ref|XM_847453.1| PREDICTED: Canis familiaris similar to AT rich interactive domain
           1A (SWI- like) isoform c, transcript variant 1
           (LOC487352), mRNA
          Length = 8487

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 271 ggagcagcagcagagggaggaggcg 295
           ||||||||||||| |||||||||||
Sbjct: 447 ggagcagcagcagcgggaggaggcg 471
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>gb|AC159140.10| Mus musculus chromosome 7, clone RP24-84I4, complete sequence
          Length = 202318

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 262   gatgccgagggagcagcagca 282
             |||||||||||||||||||||
Sbjct: 17865 gatgccgagggagcagcagca 17845
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>emb|AL390765.17| Human DNA sequence from clone RP11-509I1 on chromosome 1 Contains the
            5' end of the GNG4 gene for guanine nucleotide binding (G
            protein) gamma 4 protein, the 3' end of the CHS1 gene for
            Chediak-Higashi syndrome 1 protein and a CpG island,
            complete sequence
          Length = 80101

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 514  ccgggacctcccgccgggccc 534
            |||||||||||||||||||||
Sbjct: 7617 ccgggacctcccgccgggccc 7597
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>gb|AC092981.3| Homo sapiens 3 BAC RP11-305I9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160000

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    ggacccgcagccgcagccgcc 237
              |||||||||||||||||||||
Sbjct: 129506 ggacccgcagccgcagccgcc 129526
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>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 222    cgcagccgcagccgccagcag 242
              |||||||||||||||||||||
Sbjct: 307332 cgcagccgcagccgccagcag 307352
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 322    ccccgaggacgtggcggccgtcgag 346
              |||||||||||||||||||| ||||
Sbjct: 209243 ccccgaggacgtggcggccgccgag 209267
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>dbj|AK141576.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630033B11 product:F17127_1 homolog [Homo
            sapiens], full insert sequence
          Length = 2213

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  gatgccgagggagcagcagca 282
            |||||||||||||||||||||
Sbjct: 1823 gatgccgagggagcagcagca 1843
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>gb|AC025842.11| Homo sapiens chromosome 15, clone RP11-31E22, complete sequence
          Length = 152908

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 273    agcagcagcagagggaggagg 293
              |||||||||||||||||||||
Sbjct: 116313 agcagcagcagagggaggagg 116293
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>gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, complete sequence
          Length = 165618

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 514    ccgggacctcccgccgggccc 534
              |||||||||||||||||||||
Sbjct: 160442 ccgggacctcccgccgggccc 160462
to top
>dbj|AK169651.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430004E17
            product:F17127_1 homolog [Homo sapiens], full insert
            sequence
          Length = 2148

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  gatgccgagggagcagcagca 282
            |||||||||||||||||||||
Sbjct: 1756 gatgccgagggagcagcagca 1776
to top
>dbj|AK039368.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330033E23 product:CDNA FLJ12886 FIS,
            CLONE NT2RP2004041, WEAKLY SIMILAR TO SYNAPSINS IA AND IB
            homolog [Homo sapiens], full insert sequence
          Length = 2229

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  gatgccgagggagcagcagca 282
            |||||||||||||||||||||
Sbjct: 1831 gatgccgagggagcagcagca 1851
to top
>dbj|AK005126.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
            library, clone:1500002O20 product:hypothetical protein,
            full insert sequence
          Length = 2232

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 262  gatgccgagggagcagcagca 282
            |||||||||||||||||||||
Sbjct: 1832 gatgccgagggagcagcagca 1852
to top
>gb|AY029164.1| Mycobacterium microti 2770c gene, complete cds
          Length = 1194

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 cgcagccgcagccgccagcag 242
           |||||||||||||||||||||
Sbjct: 135 cgcagccgcagccgccagcag 115
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 273     agcagcagcagagggaggagg 293
               |||||||||||||||||||||
Sbjct: 7774975 agcagcagcagagggaggagg 7774955
to top
>gb|AF335181.1|AF335181 Mycobacterium microti strain OV 254 Rv2770c-like protein (ov2770c)
           gene, complete cds
          Length = 1194

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 cgcagccgcagccgccagcag 242
           |||||||||||||||||||||
Sbjct: 135 cgcagccgcagccgccagcag 115
to top
>gb|AY010119.1| Petromyzon marinus homeodomain protein DlxD (DlxD) mRNA, complete
           cds
          Length = 2390

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 328 ggacgtggcggccgtcgaggcgctc 352
           ||||||||| |||||||||||||||
Sbjct: 102 ggacgtggccgccgtcgaggcgctc 78
to top
>gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complete sequence
          Length = 137557

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 282  agagggaggaggcgccgccgg 302
            |||||||||||||||||||||
Sbjct: 7603 agagggaggaggcgccgccgg 7583
to top
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1077_A12
          Length = 149089

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 273    agcagcagcagagggaggagg 293
              |||||||||||||||||||||
Sbjct: 111240 agcagcagcagagggaggagg 111220
to top
>dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0006L10
          Length = 171115

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 273   agcagcagcagagggaggagg 293
             |||||||||||||||||||||
Sbjct: 15338 agcagcagcagagggaggagg 15318
to top
>dbj|AK073410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039K17, full
           insert sequence
          Length = 1567

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 273 agcagcagcagagggaggagg 293
           |||||||||||||||||||||
Sbjct: 287 agcagcagcagagggaggagg 307
to top
>gb|AF051212.1|AF051212 Picea mariana probable 60s ribosomal protein L13a (Sb16) mRNA,
           complete cds
          Length = 918

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 272 gagcagcagcagagggaggag 292
           |||||||||||||||||||||
Sbjct: 26  gagcagcagcagagggaggag 46
to top
>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence
          Length = 250028

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 262    gatgccgagggagcagcagca 282
              |||||||||||||||||||||
Sbjct: 249181 gatgccgagggagcagcagca 249161
to top
>gb|M30275.1|QULPROT Quail (C.japonica) protamine mRNA, complete cds
          Length = 311

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 ggacccgcagccgcagccgcc 237
           |||||||||||||||||||||
Sbjct: 44  ggacccgcagccgcagccgcc 64
to top
>dbj|AB048759.1| Lampetra japonica mRNA for homeoprotein LjDLX1/6, complete cds
          Length = 2474

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 328 ggacgtggcggccgtcgaggcgctc 352
           |||||||||||||||||| ||||||
Sbjct: 284 ggacgtggcggccgtcgatgcgctc 260
to top
>gb|BC052024.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone
           IMAGE:6403743), partial cds
          Length = 2083

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 ccgcagccgcagccgccagcagcc 244
           |||||||||| |||||||||||||
Sbjct: 737 ccgcagccgccgccgccagcagcc 760
to top
>ref|NM_194591.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein
            kinase (OSJNBa0092N12.12), mRNA
          Length = 3333

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  cgccgggctacgtgccgccg 316
            ||||||||||||||||||||
Sbjct: 2975 cgccgggctacgtgccgccg 2994
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 321     gccccgaggacgtggcggccgtcgaggcgctc 352
               |||||||| |||| |||||||||||| |||||
Sbjct: 1458094 gccccgagaacgtcgcggccgtcgagacgctc 1458125
to top
>ref|XM_469379.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 693

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 ccccgaggacgtggcggccg 341
           ||||||||||||||||||||
Sbjct: 244 ccccgaggacgtggcggccg 225
to top
>ref|NM_186392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2856

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 283 gagggaggaggcgccgccgg 302
           ||||||||||||||||||||
Sbjct: 129 gagggaggaggcgccgccgg 148
to top
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0092N12, complete sequence
          Length = 109198

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   cgccgggctacgtgccgccg 316
             ||||||||||||||||||||
Sbjct: 96500 cgccgggctacgtgccgccg 96519
to top
>gb|BC074138.1| Xenopus laevis hypothetical protein LOC443694, mRNA (cDNA clone
            IMAGE:7008480), partial cds
          Length = 3615

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1301 ggagcagcagcagagggagg 1320
to top
>ref|XM_599974.2| PREDICTED: Bos taurus similar to SH3 domain protein 1B, transcript
            variant 1 (LOC521706), mRNA
          Length = 5887

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1344 ggagcagcagcagagggagg 1363
to top
>ref|XM_871682.1| PREDICTED: Bos taurus similar to SH3 domain protein 1B, transcript
            variant 4 (LOC521706), mRNA
          Length = 5953

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1344 ggagcagcagcagagggagg 1363
to top
>ref|XM_863879.1| PREDICTED: Bos taurus similar to SH3 domain protein 1B, transcript
            variant 2 (LOC521706), mRNA
          Length = 6034

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1344 ggagcagcagcagagggagg 1363
to top
>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
             sequence
          Length = 191358

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   cagcagagggaggaggcgccgccg 301
             ||||||| ||||||||||||||||
Sbjct: 59009 cagcagaaggaggaggcgccgccg 58986
to top
>ref|NM_011365.2| Mus musculus intersectin 2 (Itsn2), mRNA
          Length = 6001

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1418 ggagcagcagcagagggagg 1437
to top
>ref|NM_009237.1| Mus musculus SRY-box containing gene 3 (Sox3), mRNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 ccgcagccgcagccgccagcagcc 244
           |||||||||| |||||||||||||
Sbjct: 515 ccgcagccgccgccgccagcagcc 538
to top
>gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, complete sequence
          Length = 175471

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    gggagcagcagcagagggag 289
              ||||||||||||||||||||
Sbjct: 128356 gggagcagcagcagagggag 128375
to top
>ref|XM_532890.2| PREDICTED: Canis familiaris similar to intersectin 2 isoform 3,
            transcript variant 1 (LOC475683), mRNA
          Length = 5750

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1190 ggagcagcagcagagggagg 1209
to top
>ref|XM_853332.1| PREDICTED: Canis familiaris similar to intersectin 2 isoform 3,
            transcript variant 8 (LOC475683), mRNA
          Length = 5543

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1190 ggagcagcagcagagggagg 1209
to top
>ref|XM_844198.1| PREDICTED: Canis familiaris similar to intersectin 2 isoform 3,
            transcript variant 2 (LOC475683), mRNA
          Length = 5831

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1190 ggagcagcagcagagggagg 1209
to top
>ref|XM_853259.1| PREDICTED: Canis familiaris similar to intersectin 2 isoform 3,
            transcript variant 7 (LOC475683), mRNA
          Length = 5720

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1190 ggagcagcagcagagggagg 1209
to top
>ref|XM_853216.1| PREDICTED: Canis familiaris similar to intersectin 2 isoform 3,
            transcript variant 6 (LOC475683), mRNA
          Length = 5720

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1190 ggagcagcagcagagggagg 1209
to top
>ref|XM_853178.1| PREDICTED: Canis familiaris similar to intersectin 2 isoform 3,
            transcript variant 5 (LOC475683), mRNA
          Length = 4109

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1190 ggagcagcagcagagggagg 1209
to top
>ref|XM_853134.1| PREDICTED: Canis familiaris similar to intersectin 2 isoform 3,
            transcript variant 4 (LOC475683), mRNA
          Length = 4118

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1190 ggagcagcagcagagggagg 1209
to top
>ref|XM_853096.1| PREDICTED: Canis familiaris similar to intersectin 2 isoform 3,
            transcript variant 3 (LOC475683), mRNA
          Length = 4079

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1190 ggagcagcagcagagggagg 1209
to top
>gb|BC063061.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone
           IMAGE:5717161), partial cds
          Length = 2077

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 ccgcagccgcagccgccagcagcc 244
           |||||||||| |||||||||||||
Sbjct: 734 ccgcagccgccgccgccagcagcc 757
to top
>gb|AC158913.4| Mus musculus chromosome 5, clone RP24-268J3, complete sequence
          Length = 152822

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   gggagcagcagcagagggag 289
             ||||||||||||||||||||
Sbjct: 11246 gggagcagcagcagagggag 11265
to top
>ref|NM_006015.3| Homo sapiens AT rich interactive domain 1A (SWI- like) (ARID1A),
           transcript variant 1, mRNA
          Length = 8595

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 gagcagcagcagagggaggaggcg 295
           |||||||||||| |||||||||||
Sbjct: 452 gagcagcagcagcgggaggaggcg 475
to top
>ref|NM_139135.1| Homo sapiens AT rich interactive domain 1A (SWI- like) (ARID1A),
           transcript variant 2, mRNA
          Length = 7944

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 gagcagcagcagagggaggaggcg 295
           |||||||||||| |||||||||||
Sbjct: 452 gagcagcagcagcgggaggaggcg 475
to top
>emb|AL590733.8| Human DNA sequence from clone RP11-193D23 on chromosome 6 Contains the
             3' end of the FLJ14440 gene for thrombospondin, complete
             sequence
          Length = 135507

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   gtagcccctcccctctctat 189
             ||||||||||||||||||||
Sbjct: 14891 gtagcccctcccctctctat 14910
to top
>emb|AL512408.12| Human DNA sequence from clone RP5-968P14 on chromosome 1 Contains the
             5' end of the SMARCF1 gene for SWI/SNF related, matrix
             associated, actin dependent regulator of chromatin
             (subfamily f, member 1) and a CpG island, complete
             sequence
          Length = 64214

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 272   gagcagcagcagagggaggaggcg 295
             |||||||||||| |||||||||||
Sbjct: 44312 gagcagcagcagcgggaggaggcg 44289
to top
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    cgccgggctacgtgccgccg 316
              ||||||||||||||||||||
Sbjct: 906054 cgccgggctacgtgccgccg 906035
to top
>gb|AC074336.14| Mus musculus Strain C57BL6/J chromosome 1 BAC, RP23-366C17, Complete
              Sequence, complete sequence
          Length = 217768

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 269    agggagcagcagcagagggaggag 292
              ||||||||| ||||||||||||||
Sbjct: 198697 agggagcaggagcagagggaggag 198720
to top
>emb|X94125.1|MMSOX3 M.musculus SOX3 gene
          Length = 1150

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 ccgcagccgcagccgccagcagcc 244
           |||||||||| |||||||||||||
Sbjct: 537 ccgcagccgccgccgccagcagcc 560
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 531     gcccgctcacgcgcctccgcgccg 554
               |||||||| |||||||||||||||
Sbjct: 4039927 gcccgctcgcgcgcctccgcgccg 4039950
to top
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   cgaggacgtggcggccgtcg 344
             ||||||||||||||||||||
Sbjct: 30031 cgaggacgtggcggccgtcg 30012
to top
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 324   ccgaggacgtggcggccgtcgagg 347
             |||||| |||||||||||||||||
Sbjct: 36514 ccgaggtcgtggcggccgtcgagg 36491
to top
>gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosome 12, complete sequence
          Length = 187225

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    ggagcagcagcagagggagg 290
              ||||||||||||||||||||
Sbjct: 168659 ggagcagcagcagagggagg 168678
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     gccgcagccgccagcagccg 245
               ||||||||||||||||||||
Sbjct: 2846598 gccgcagccgccagcagccg 2846617
to top
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12,
             complete sequence
          Length = 129420

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   cgccgggctacgtgccgccg 316
             ||||||||||||||||||||
Sbjct: 30128 cgccgggctacgtgccgccg 30147
to top
>dbj|AK163807.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130040M22 product:Intersectin 2 (SH3
            domain-containing protein 1B) (SH3P18) (SH3P18-like WASP
            associated protein) homolog [Homo sapiens], full insert
            sequence
          Length = 2254

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1392 ggagcagcagcagagggagg 1411
to top
>gb|AF434675.1| Mus musculus transcription factor SOX3 (Sox3) gene, complete cds
          Length = 18632

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 221  ccgcagccgcagccgccagcagcc 244
            |||||||||| |||||||||||||
Sbjct: 5850 ccgcagccgccgccgccagcagcc 5873
to top
>dbj|AK029325.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4832424L08 product:SH3 domain protein 1B,
            full insert sequence
          Length = 2641

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1365 ggagcagcagcagagggagg 1384
to top
>dbj|AK042449.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630092L24 product:SH3 domain protein 1B,
            full insert sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1388 ggagcagcagcagagggagg 1407
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>dbj|AK031390.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030422B13 product:SH3 domain
           protein 1B, full insert sequence
          Length = 2736

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 ggagcagcagcagagggagg 290
           ||||||||||||||||||||
Sbjct: 186 ggagcagcagcagagggagg 205
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>dbj|AK034367.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330184B19 product:ESE2L PROTEIN homolog
            [Mus musculus], full insert sequence
          Length = 2352

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1419 ggagcagcagcagagggagg 1438
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>gb|BC096018.1| Mus musculus SRY-box containing gene 3, mRNA (cDNA clone
           IMAGE:6829907), partial cds
          Length = 2047

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 ccgcagccgcagccgccagcagcc 244
           |||||||||| |||||||||||||
Sbjct: 698 ccgcagccgccgccgccagcagcc 721
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 468      acgccgtgctcacctgcctc 487
                ||||||||||||||||||||
Sbjct: 19959586 acgccgtgctcacctgcctc 19959567
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    cgccgggctacgtgccgccg 316
              ||||||||||||||||||||
Sbjct: 906054 cgccgggctacgtgccgccg 906035
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 274      gcagcagcagagggaggagg 293
                ||||||||||||||||||||
Sbjct: 26636486 gcagcagcagagggaggagg 26636467



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     gagggaggaggcgccgccgg 302
               ||||||||||||||||||||
Sbjct: 3239487 gagggaggaggcgccgccgg 3239506
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>gb|AF231056.1|AF231056 Homo sapiens BRG1-Associated Factor 250a (BAF250a) mRNA, complete
           cds
          Length = 7697

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 gagcagcagcagagggaggaggcg 295
           |||||||||||| |||||||||||
Sbjct: 460 gagcagcagcagcgggaggaggcg 483
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 444     acgagcggctcgagtacctgggcgacgc 471
               |||||||||| |||| ||||||||||||
Sbjct: 1893894 acgagcggctggagttcctgggcgacgc 1893921
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>gb|AC007736.3| Homo sapiens BAC clone RP11-15J24 from 2, complete sequence
          Length = 172476

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    cccctctctataacccccct 198
              ||||||||||||||||||||
Sbjct: 107669 cccctctctataacccccct 107688
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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1340_C08
          Length = 192167

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    gcagcagcagagggaggagg 293
              ||||||||||||||||||||
Sbjct: 181757 gcagcagcagagggaggagg 181738
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>dbj|AB108674.1| Mus musculus Sox3 mRNA for transcriptional factor SOX3, complete
           cds
          Length = 1128

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 221 ccgcagccgcagccgccagcagcc 244
           |||||||||| |||||||||||||
Sbjct: 515 ccgcagccgccgccgccagcagcc 538
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>gb|AC145691.5| Mus musculus chromosome 1, clone RP24-278B15, complete sequence
          Length = 164151

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    gtgctcacctgcctcgtgtc 492
              ||||||||||||||||||||
Sbjct: 106855 gtgctcacctgcctcgtgtc 106836
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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    gagggaggaggcgccgccgg 302
              ||||||||||||||||||||
Sbjct: 154477 gagggaggaggcgccgccgg 154496
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>dbj|AK122480.1| Mus musculus mRNA for mKIAA1256 protein
          Length = 5804

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 ggagcagcagcagagggagg 290
           ||||||||||||||||||||
Sbjct: 805 ggagcagcagcagagggagg 824
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>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524G08
          Length = 146690

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gcagcagcagagggaggagg 293
             ||||||||||||||||||||
Sbjct: 54090 gcagcagcagagggaggagg 54071
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>gb|AY112283.1| Zea mays CL19552_1 mRNA sequence
          Length = 694

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 ccccgaggacgtggcggccg 341
           ||||||||||||||||||||
Sbjct: 358 ccccgaggacgtggcggccg 377
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   gagggaggaggcgccgccgg 302
             ||||||||||||||||||||
Sbjct: 49180 gagggaggaggcgccgccgg 49199
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>gb|AF132480.1|AF132480 Mus musculus Ese2 protein mRNA, complete cds
          Length = 3594

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1158 ggagcagcagcagagggagg 1177
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>gb|AF132479.1|AF132479 Mus musculus Ese2L protein mRNA, complete cds
          Length = 4977

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  ggagcagcagcagagggagg 290
            ||||||||||||||||||||
Sbjct: 1158 ggagcagcagcagagggagg 1177
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>gb|AC119809.10| Mus musculus chromosome 1, clone RP24-505E24, complete sequence
          Length = 154931

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 269  agggagcagcagcagagggaggag 292
            ||||||||| ||||||||||||||
Sbjct: 7771 agggagcaggagcagagggaggag 7794
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     gccgcagccgccagcagccg 245
               ||||||||||||||||||||
Sbjct: 2868453 gccgcagccgccagcagccg 2868472
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>dbj|AB070348.1| Branchiostoma belcheri Tbr mRNA for T-brain, complete cds
          Length = 2858

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 500 gtcttcctcacctaccgggacctc 523
           |||||||||||| |||||||||||
Sbjct: 699 gtcttcctcaccaaccgggacctc 722
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>dbj|AP002342.3| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2258N2, complete
              sequences
          Length = 174548

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    cagcagcagagggaggaggc 294
              ||||||||||||||||||||
Sbjct: 146424 cagcagcagagggaggaggc 146405
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>gb|AC166124.4| Mus musculus chromosome 1, clone RP23-105N9, complete sequence
          Length = 226615

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   gtgctcacctgcctcgtgtc 492
             ||||||||||||||||||||
Sbjct: 31200 gtgctcacctgcctcgtgtc 31181
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    cgccgggctacgtgccgccg 316
              ||||||||||||||||||||
Sbjct: 906051 cgccgggctacgtgccgccg 906032
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 468      acgccgtgctcacctgcctc 487
                ||||||||||||||||||||
Sbjct: 19885800 acgccgtgctcacctgcctc 19885781
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>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165433

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   acgccgtgctcacctgcctc 487
             ||||||||||||||||||||
Sbjct: 67674 acgccgtgctcacctgcctc 67693
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>emb|AL807233.10| Mouse DNA sequence from clone RP23-174O19 on chromosome X, complete
              sequence
          Length = 195054

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 221    ccgcagccgcagccgccagcagcc 244
              |||||||||| |||||||||||||
Sbjct: 128982 ccgcagccgccgccgccagcagcc 128959
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>emb|AL590792.1| Human DNA sequence from clone RP11-416F22 on chromosome 6, complete
             sequence
          Length = 51956

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   gtagcccctcccctctctat 189
             ||||||||||||||||||||
Sbjct: 13002 gtagcccctcccctctctat 13021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,983,055
Number of Sequences: 3902068
Number of extensions: 3983055
Number of successful extensions: 89017
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87098
Number of HSP's gapped (non-prelim): 1916
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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