>gb|AF043093.1|AF043093 Hordeum vulgare dehydrin 8 (dhn8) gene, complete cds
          Length = 2254

 Score =  258 bits (130), Expect = 4e-66
 Identities = 130/130 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    catcattcagaaagccacaagccaagaaccaatagtctttgctgatccgctgttttctct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 catcattcagaaagccacaagccaagaaccaatagtctttgctgatccgctgttttctct 1233

                                                                        
Query: 61   agctcccacgagtctttagctgcaccgaccgatctcgatcatggaggatgagaggagcac 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 agctcccacgagtctttagctgcaccgaccgatctcgatcatggaggatgagaggagcac 1293

                      
Query: 121  ccagtcatac 130
            ||||||||||
Sbjct: 1294 ccagtcatac 1303

>emb|X84056.1|HVPAF93 H.vulgare paf93 gene
          Length = 1154

 Score =  248 bits (125), Expect = 3e-63
 Identities = 125/125 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   ttcagaaagccacaagccaagaaccaatagtctttgctgatccgctgttttctctagctc 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttcagaaagccacaagccaagaaccaatagtctttgctgatccgctgttttctctagctc 60

                                                                       
Query: 66  ccacgagtctttagctgcaccgaccgatctcgatcatggaggatgagaggagcacccagt 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ccacgagtctttagctgcaccgaccgatctcgatcatggaggatgagaggagcacccagt 120

                
Query: 126 catac 130
           |||||
Sbjct: 121 catac 125

>gb|AF343068.1|AF343068 Hordeum vulgare Dhn8 gene, Dhn8s allele, promoter region
          Length = 1250

 Score =  192 bits (97), Expect = 2e-46
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    catcattcagaaagccacaagccaagaaccaatagtctttgctgatccgctgttttctct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 catcattcagaaagccacaagccaagaaccaatagtctttgctgatccgctgttttctct 1213

                                                 
Query: 61   agctcccacgagtctttagctgcaccgaccgatctcg 97
            |||||||||||||||||||||||||||||||||||||
Sbjct: 1214 agctcccacgagtctttagctgcaccgaccgatctcg 1250

>emb|AJ890140.1| Triticum turgidum subsp. durum mRNA for dehydrin (dhn11 gene)
          Length = 1127

 Score =  103 bits (52), Expect = 1e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                   
Query: 75  tttagctgcaccgaccgatctcgatcatggaggatgagaggagcacccagtcatac 130
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  tttagctgcaccgatcgatctcgatcatggaggatgagaggagcacccagtcatac 119

>gb|L19419.1|LHPESI Lophopyrum elongatum ES135 mRNA sequence
          Length = 1130

 Score =  103 bits (52), Expect = 1e-19
 Identities = 55/56 (98%)
 Strand = Plus / Plus

                                                                   
Query: 75  tttagctgcaccgaccgatctcgatcatggaggatgagaggagcacccagtcatac 130
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  tttagctgcaccgatcgatctcgatcatggaggatgagaggagcacccagtcatac 115

>gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein WCOR410c (Wcor410c)
           mRNA, complete cds
          Length = 1242

 Score =  103 bits (52), Expect = 1e-19
 Identities = 105/122 (86%), Gaps = 8/122 (6%)
 Strand = Plus / Plus

                                                                       
Query: 11  aaagccacaagccaagaaccaatagtctttgctgatccgctgttttctctagctccc--a 68
           |||||||||||||||||||||||| |      ||||| | |||||||| ||||||||  |
Sbjct: 10  aaagccacaagccaagaaccaatact------tgatctgttgttttctttagctcccgga 63

                                                                       
Query: 69  cgagtctttagctgcaccgaccgatctcgatcatggaggatgagaggagcacccagtcat 128
            ||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 64  agaccttttagctgcaccgatcgatctcgatcatggaggatgagaggagcacccagtcat 123

             
Query: 129 ac 130
           ||
Sbjct: 124 ac 125

>gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein WCOR410b (Wcor410b)
           mRNA, complete cds
          Length = 1181

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 79  gctgcaccgaccgatctcgatcatggaggatgagaggagcacccagtc 126
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  gctgcaccgaccgatctcgatcatggaggatgagaggagcacccagtc 103

>gb|L29152.1|WHTWCOR Triticum aestivum cold acclimation protein (WCOR410) mRNA, complete
           cds
          Length = 1136

 Score = 95.6 bits (48), Expect = 3e-17
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                               
Query: 75  tttagctgcaccgaccgatctcgatcatggaggatgagaggagcacccagtc 126
           |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  tttagctgcaccgatcgatctcgatcatggaggatgagaggagcacccagtc 112

>gb|AF181458.1|AF181458 Hordeum vulgare dehydrin (Dhn8) mRNA, complete cds
          Length = 808

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 99  tcatggaggatgagaggagcacccagtcatac 130
           ||||||||||||||||||||||||||||||||
Sbjct: 1   tcatggaggatgagaggagcacccagtcatac 32

>gb|L35913.1|MZELIPASE Zea mays dehydrin (dhn-2) mRNA, complete cds
          Length = 1277

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 96  cgatcatggaggatgagaggagcacccag 124
           ||||||||||||||||||||| |||||||
Sbjct: 46  cgatcatggaggatgagaggaacacccag 74

>gb|AY111114.1| Zea mays CL2452_1 mRNA sequence
          Length = 1256

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 96  cgatcatggaggatgagaggagcacccag 124
           ||||||||||||||||||||| |||||||
Sbjct: 46  cgatcatggaggatgagaggaacacccag 74

>gb|AY587109.1| Oryza sativa (japonica cultivar-group) dehydration-stress inducible
           protein 1 mRNA, complete cds
          Length = 1315

 Score = 44.1 bits (22), Expect = 0.099
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 95  tcgatcatggaggatgagagga 116
           ||||||||||||||||||||||
Sbjct: 103 tcgatcatggaggatgagagga 124

>gb|AY786415.1| Oryza sativa (japonica cultivar-group) SK3-type dehydrin 1 (Dhn1)
           mRNA, complete cds
          Length = 1117

 Score = 44.1 bits (22), Expect = 0.099
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 95  tcgatcatggaggatgagagga 116
           ||||||||||||||||||||||
Sbjct: 93  tcgatcatggaggatgagagga 114

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.099
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 95       tcgatcatggaggatgagagga 116
                ||||||||||||||||||||||
Sbjct: 27185278 tcgatcatggaggatgagagga 27185257

>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 44.1 bits (22), Expect = 0.099
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 95    tcgatcatggaggatgagagga 116
             ||||||||||||||||||||||
Sbjct: 81727 tcgatcatggaggatgagagga 81706

>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684A08
          Length = 137841

 Score = 44.1 bits (22), Expect = 0.099
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 95    tcgatcatggaggatgagagga 116
             ||||||||||||||||||||||
Sbjct: 35949 tcgatcatggaggatgagagga 35928

>dbj|AK070197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N13, full
           insert sequence
          Length = 1292

 Score = 44.1 bits (22), Expect = 0.099
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 95  tcgatcatggaggatgagagga 116
           ||||||||||||||||||||||
Sbjct: 115 tcgatcatggaggatgagagga 136

>emb|AL591587.9| Human DNA sequence from clone RP11-315O19 on chromosome X Contains a
             IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1)
             pseudogene, complete sequence
          Length = 78767

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     cagaaagccacaagccaagaa 28
             |||||||||||||||||||||
Sbjct: 17212 cagaaagccacaagccaagaa 17232

>gb|AF457977.1| Zea mays clone cbn10.pk0055.e11, mRNA sequence
          Length = 556

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 100 catggaggatgagaggagcacccag 124
           ||||||||||||||||| |||||||
Sbjct: 83  catggaggatgagaggaacacccag 107

>gb|AY105067.1| Zea mays PCO081051 mRNA sequence
          Length = 1398

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 100 catggaggatgagaggagcacccag 124
           ||||||||||||||||| |||||||
Sbjct: 117 catggaggatgagaggaacacccag 141

>gb|AC147879.2| Xenopus tropicalis clone CH216-108K9, complete sequence
          Length = 183182

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     cattcagaaagccacaagcc 23
             ||||||||||||||||||||
Sbjct: 37410 cattcagaaagccacaagcc 37429

>dbj|AP001485.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-681H10, complete
             sequence
          Length = 158577

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     agaaagccacaagccaagaa 28
             ||||||||||||||||||||
Sbjct: 85701 agaaagccacaagccaagaa 85682

>ref|NM_103066.2| Arabidopsis thaliana unknown protein AT1G33410 mRNA, complete cds
          Length = 4529

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 51   tgttttctctagctcccac 69
            |||||||||||||||||||
Sbjct: 4254 tgttttctctagctcccac 4236

>gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, partial sequence
          Length = 190912

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    gatctcgatcatggaggat 109
             |||||||||||||||||||
Sbjct: 32745 gatctcgatcatggaggat 32727

>emb|AL360093.11| Human DNA sequence from clone RP11-135J2 on chromosome 1 Contains the
             LYPLAL1 gene for lysophospholipase-like protein 1, a novel
             pseudogene (KIAA1238) and a novel transcript, complete
             sequence
          Length = 141156

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    agaaccaatagtctttgct 43
             |||||||||||||||||||
Sbjct: 20543 agaaccaatagtctttgct 20561

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 28      accaatagtctttgctgat 46
               |||||||||||||||||||
Sbjct: 1457087 accaatagtctttgctgat 1457105

>gb|AC015914.8| Homo sapiens chromosome 15, clone RP11-111E14, complete sequence
          Length = 170078

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     tcattcagaaagccacaag 21
             |||||||||||||||||||
Sbjct: 75394 tcattcagaaagccacaag 75376

>gb|CP000134.1| Rhizobium etli CFN 42 plasmid p42a, complete sequence
          Length = 194229

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 95     tcgatcatggaggatgaga 113
              |||||||||||||||||||
Sbjct: 153734 tcgatcatggaggatgaga 153752

>gb|AC008883.6| Homo sapiens chromosome 5 clone CTD-2215E18, complete sequence
          Length = 127144

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 97    gatcatggaggatgagagg 115
             |||||||||||||||||||
Sbjct: 49820 gatcatggaggatgagagg 49802

>gb|AC051630.4|AC051630 Arabidopsis thaliana chromosome 1 BAC F10C21 genomic sequence, complete
             sequence
          Length = 97242

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    tgttttctctagctcccac 69
             |||||||||||||||||||
Sbjct: 33759 tgttttctctagctcccac 33777

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     ctgcaccgaccgatctcga 98
              |||||||||||||||||||
Sbjct: 284689 ctgcaccgaccgatctcga 284671

>emb|BX276177.6| Zebrafish DNA sequence from clone CH211-223M11 in linkage group 20,
             complete sequence
          Length = 202340

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 111   agaggagcacccagtcata 129
             |||||||||||||||||||
Sbjct: 50658 agaggagcacccagtcata 50676


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,156,585
Number of Sequences: 3902068
Number of extensions: 1156585
Number of successful extensions: 175923
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 175824
Number of HSP's gapped (non-prelim): 99
length of query: 130
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 109
effective length of database: 17,151,101,840
effective search space: 1869470100560
effective search space used: 1869470100560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)