ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25c10 |
|---|---|
| Clone Library Name | barley_pub |
>PRDM8_HUMAN (Q9NQV8) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 689 Score = 34.7 bits (78), Expect = 0.17 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 56 QQKEQSDGPFPPVPRFCSIPPLNSPPSQGTTITHPDTTKG 175 QQ++Q + P P P+FC PL+ PS ++P G Sbjct: 212 QQQQQQEAPLGPGPKFCKAGPLHHYPSPSPESSNPSAAAG 251
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 31.6 bits (70), Expect = 1.5 Identities = 34/110 (30%), Positives = 38/110 (34%), Gaps = 18/110 (16%) Frame = +2 Query: 8 SPCSRAERERI*SFGPQQKEQSDGPFPPVPRFCSIPP-----------LNSPPSQGT--- 145 SP SR+ RE PQ K S P P S PP PS T Sbjct: 657 SPPSRSNRET--RSPPQNKRDSPSPRPRASHTSSSPPPLRRGASASPQRRQSPSPSTRPI 714 Query: 146 ----TITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAIPFLHSRARTPA 283 P TK T R R +S A G+P PA P H +PA Sbjct: 715 RRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPA-PKKHQGPPSPA 763
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 31.2 bits (69), Expect = 1.9 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 11/75 (14%) Frame = +2 Query: 53 PQQKEQSDGPFPPVPRFCSIPPLNS------PPSQGTTITHPDTTKGKTYRGRQLRTRRT 214 P Q S GP PP P + + P N+ PP+ G + HP ++ +Q + Sbjct: 431 PSQAVWSQGPPPPPPPYGRLLPNNNTHPGPFPPTGGQSTAHPPAPAHHHHQQQQQPQPQP 490 Query: 215 SPKAW-----GTPPP 244 P+ G PPP Sbjct: 491 QPQQHHHGNSGPPPP 505
>TNAA_RHOCA (O30971) Tryptophanase (EC 4.1.99.1) (L-tryptophan indole-lyase)| (TNase) Length = 454 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -1 Query: 246 AGGGVPHALGDVRRVRSCLPRYVFPFVVSG 157 AGGG P +L ++R V RY PFV+ G Sbjct: 185 AGGGQPVSLANIRAVADLAHRYGKPFVIDG 214
>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag| polyprotein) [Contains: Matrix protein; Capsid protein] Length = 469 Score = 30.4 bits (67), Expect = 3.3 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 6/81 (7%) Frame = +2 Query: 53 PQQKEQSDGPFPPVPRFCSIPPLNS------PPSQGTTITHPDTTKGKTYRGRQLRTRRT 214 P KE P P ++PPL + P S G T T P + Sbjct: 111 PSNKEPDSSPLSEPPEALALPPLPAALPPPYPGSSGPTPTAPPLPPTPP-------SSPA 163 Query: 215 SPKAWGTPPPAIPFLHSRART 277 +P A PPP+ H+R++T Sbjct: 164 NPPASALPPPSPVSAHTRSKT 184
>IGHD_RAT (P01883) Ig delta chain C region (Fragment)| Length = 202 Score = 30.4 bits (67), Expect = 3.3 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 107 SIPPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTP 238 S+P N P+ TIT+ K KT++ + R ++S KA TP Sbjct: 11 SVPAPNLSPNLTCTITNTSKKKSKTFKLPETRNSQSSKKANPTP 54
>STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)| Length = 1262 Score = 29.6 bits (65), Expect = 5.6 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = -2 Query: 350 PSPASDERAATSR------AMNPPVAAPWLASELDCAGTGWLEVASPMP 222 P PA +AA R A+NPP AAP LD GT + A P P Sbjct: 246 PRPAPPGQAAPQRPPPPLAAVNPPPAAPEADDLLDMFGTTACKPAKPPP 294
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 29.6 bits (65), Expect = 5.6 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +2 Query: 50 GPQQKEQSDGPFPPVPRFCSIPPLNSPPSQGTTITHPDTTKGKTY 184 GP Q Q G FPPV R + PP N PP G T P G ++ Sbjct: 100 GPPQVSQPGG-FPPVGRPVA-PPSNQPPFGGRPSTGPLVGGGSSF 142
>TYPH_BURPS (Q63IV6) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)| Length = 440 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -1 Query: 147 VVPWEGGEFNGGILQKRGTGGKGPSLCSFCWGP 49 V+ W G NG ++ K TGG G L S GP Sbjct: 70 VLDWRGARLNGPVVDKHSTGGVG-DLTSLVIGP 101
>TYPH_BURMA (Q62EC5) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)| Length = 440 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -1 Query: 147 VVPWEGGEFNGGILQKRGTGGKGPSLCSFCWGP 49 V+ W G NG ++ K TGG G L S GP Sbjct: 70 VLDWRGARLNGPVVDKHSTGGVG-DLTSLVIGP 101
>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6| Length = 548 Score = 29.6 bits (65), Expect = 5.6 Identities = 19/58 (32%), Positives = 23/58 (39%) Frame = +2 Query: 80 PFPPVPRFCSIPPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAIP 253 P PP P PPL PP++G P G+ Y + T P G PP P Sbjct: 251 PGPPPPGQPLPPPLPGPPNRGERPPPPVMFPGQPYGQPSIVTLPPGPPPPGYGPPPGP 308
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 29.6 bits (65), Expect = 5.6 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = +1 Query: 184 PREAAAHTPNVTQGMGDATSSHPVPAQSSSDASHGAATGGFIALDVAALSSLA 342 P AAA P G AT++ PVP ++S A AA AA ++ A Sbjct: 91 PTTAAAGAPTTATGKAPATAAAPVPTTAASKAPTTAAAATHSTAAAAAPTTAA 143
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 29.6 bits (65), Expect = 5.6 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 6/74 (8%) Frame = +2 Query: 80 PFPPVPRFCSIPPLNSPPSQGTTITHPD----TTKGKTYRGRQLRTRRTSPKAWGT--PP 241 P PP+ + PP +P S TT P TT T T T+P + T PP Sbjct: 1665 PSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPP 1724 Query: 242 PAIPFLHSRARTPA 283 P S TP+ Sbjct: 1725 PTTMTTPSPTTTPS 1738
>KS6B2_MOUSE (Q9Z1M4) Ribosomal protein S6 kinase beta-2 (EC 2.7.11.1) (S6K-beta| 2) (70 kDa ribosomal protein S6 kinase 2) (p70-S6KB) (p70 ribosomal S6 kinase beta) (p70 S6Kbeta) (S6K2) Length = 485 Score = 29.6 bits (65), Expect = 5.6 Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Frame = +2 Query: 80 PFPPVPRFCSIPP-LNSPPSQGTTITHP-------DTTKGKTYRGRQLR 202 P PP P S+PP L SPPS T T P T K K RGR R Sbjct: 437 PGPPEPMEPSLPPLLPSPPSPPPTSTAPLPIRPPSGTKKSKKGRGRSGR 485
>NHK1_DROME (Q7KRY6) Nucleosomal histone kinase 1 (EC 2.7.11.1) (Protein| baellchen) Length = 599 Score = 29.3 bits (64), Expect = 7.3 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = +2 Query: 89 PVPRFCSIPPL-----NSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAIP 253 P R + PL +SPPSQ T P +T + + R++PKA +P P P Sbjct: 411 PSARNAKVSPLKRVADSSPPSQKRVKTEPKSTPRERATPKASPKPRSTPKA--SPKPQTP 468 Query: 254 FLHSRARTP 280 +R RTP Sbjct: 469 -TAARLRTP 476
>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)| Length = 1468 Score = 29.3 bits (64), Expect = 7.3 Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 1/59 (1%) Frame = +2 Query: 80 PFPPVPRFCSI-PPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAIP 253 P PP+P C + PP PP T + D L P + G PPP P Sbjct: 899 PAPPIPPVCPVSPPPPPPPPPPTPVPPSDGPPPPPPPPPPLPNVLALPNSGGPPPPPPP 957
>FIT2_YEAST (Q08906) Facilitator of iron transport 2 precursor| Length = 153 Score = 29.3 bits (64), Expect = 7.3 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +1 Query: 202 HTPNVTQGMGDATSSHPVPAQSSSDA-SHGAATGGFIALDVAALS 333 +T VTQ + +TSS + SSS A S GAA F V AL+ Sbjct: 101 YTKTVTQAVESSTSSSSSSSSSSSSASSSGAAPAAFQGASVGALA 145
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 29.3 bits (64), Expect = 7.3 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = +2 Query: 53 PQQKEQSDGPFPPVPRFCSIPPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWG 232 P+ + S + P P+ PP PP+ +T THP T Y T + +PK Sbjct: 202 PKPPKPSPPTYTPTPK----PPATKPPT--STPTHPKPTPHTPYPQAHPPTYKPAPKP-- 253 Query: 233 TPPPAIP 253 +PP P Sbjct: 254 SPPAPTP 260
>EXOC7_DROME (Q9VSJ8) Exocyst complex component 7 (Exocyst complex component| Exo70) Length = 693 Score = 29.3 bits (64), Expect = 7.3 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = +3 Query: 138 KGQP*LTQIQQKGRHTAGGSCAHAERHPRHGGRHLQPSRSCTVEL 272 +G+ L +Q H S H PRH GR +P ++ + L Sbjct: 217 RGEVVLRSLQLLKDHQKSNSWGHEALRPRHSGRQTEPKKTTSARL 261
>CORA_HBVWS (P29178) Core antigen| Length = 195 Score = 29.3 bits (64), Expect = 7.3 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +2 Query: 113 PPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPP 244 PP PP+ T P+TT + RGR R R SP+ +P P Sbjct: 141 PPAYRPPNAPILSTLPETTVVRR-RGRSPRRRTPSPRRRRSPSP 183
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 29.3 bits (64), Expect = 7.3 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Frame = +2 Query: 86 PPVPRFCSIPPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTP----PPAIP 253 PP P PP PP + T +T + K + R+SP+ GT PP P Sbjct: 2910 PPAPE----PPAPEPPPEPTKVTVQSLSPAKEVVSSPGSSPRSSPRPEGTTLRQGPPQKP 2965 Query: 254 --FLHSRAR 274 FL +AR Sbjct: 2966 YTFLEEKAR 2974
>AMID_RHORH (P84650) Enantioselective amidase (EC 3.5.1.4)| Length = 517 Score = 29.3 bits (64), Expect = 7.3 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Frame = +1 Query: 229 GDATSSHPVPAQSSSDASHGAATGGFIALDVAALSS------LAGDG 351 G + +SHP P ++ D SHG GG + A ++S + GDG Sbjct: 148 GSSVTSHPQPVRNPWDESHGYKAGGSSSGSEALVASGHVDCAVGGDG 194
>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like| protein 1) Length = 870 Score = 29.3 bits (64), Expect = 7.3 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%) Frame = +2 Query: 56 QQKEQSDGPFPPVPRFCSIPPLNSP---PSQGTTITHPDTTKGKTYRGRQLRTRRTSPKA 226 +++E+ P PPVP PP+ SP P + P K+ T +SPK Sbjct: 425 EEEEEEGEPAPPVPSPSLAPPVPSPSPAPPVPSPAPAPSEATPKSLHPWYGITPTSSPKT 484 Query: 227 WGTPPPAIP 253 P P P Sbjct: 485 KKRPAPRAP 493
>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)| Length = 1206 Score = 29.3 bits (64), Expect = 7.3 Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 1/59 (1%) Frame = +2 Query: 80 PFPPVPRFCSI-PPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAIP 253 P PP+P C + PP PP T + D L P + G PPP P Sbjct: 673 PAPPIPPVCPVSPPPPPPPPPPTPVPPSDGPPPPPPPPPPLPNVLALPNSGGPPPPPPP 731
>HUNB_MANSE (Q25514) Protein hunchback (Fragment)| Length = 327 Score = 29.3 bits (64), Expect = 7.3 Identities = 23/67 (34%), Positives = 28/67 (41%) Frame = +2 Query: 89 PVPRFCSIPPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAIPFLHSR 268 P+ + PP SPPS T TH + L +TS GTPPP P + Sbjct: 184 PLESGSTSPPPKSPPSITQTPTHREMPTEHGDDALDLTNAKTSEA--GTPPP--PTERAT 239 Query: 269 ARTPATA 289 TP TA Sbjct: 240 PVTPTTA 246
>DADA_KLEAE (O30745) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 29.3 bits (64), Expect = 7.3 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -2 Query: 350 PSPASDERAATSRAMNPPVAAPWLASELDCAGTGWL 243 P PA + AA + ++P AAPW A + W+ Sbjct: 33 PGPAEETSAANAGQISPGYAAPWAAPGVPLKAIKWM 68
>ZC11A_HUMAN (O75152) Zinc finger CCCH-type domain-containing protein 11A| Length = 810 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = +2 Query: 128 PPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAI 250 PP+Q ++ + P G + ++TRR S + G PP ++ Sbjct: 729 PPTQSSSDSSPPEVSGPSSSQMSMKTRRLSSASTGKPPLSV 769
>YGAN_BACSU (P97028) Hypothetical protein ygaN| Length = 178 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/43 (27%), Positives = 26/43 (60%) Frame = -2 Query: 134 KAENLMAEYYKNEEPEGKDRHFVLFVGGQKIRFSLSLPASMER 6 K + + Y++NEE EGK++H + G + +++ +S++R Sbjct: 75 KTDTIQFVYFENEEGEGKNKHTTIHFGIVDKQGTIAADSSVKR 117
>PROL1_HUMAN (Q99935) Proline-rich protein 1 precursor (PRL1) (Basic| proline-rich lacrimal protein) Length = 201 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 8/44 (18%) Frame = +2 Query: 80 PFPPVPRFCSI--------PPLNSPPSQGTTITHPDTTKGKTYR 187 PFPP+P F +I P +N + T T+P TT T R Sbjct: 123 PFPPIPFFLAIYLPISNPEPQINITTADTTITTNPPTTATATTR 166
>MIG10_CAEEL (P34400) Abnormal cell migration protein 10| Length = 779 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Frame = +2 Query: 53 PQQKEQSDGPFP---PVPRFCSIPPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPK 223 PQ++ SD FP PV +PP +PP T +T R + + SP Sbjct: 697 PQEESDSDEEFPAPPPVASVMRMPPPVTPPKPCTPLTSKKAPPPPPKRSDTTKLQSASPM 756 Query: 224 A 226 A Sbjct: 757 A 757
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 28.9 bits (63), Expect = 9.5 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 9/76 (11%) Frame = +2 Query: 80 PFPPVPRFCSIPPLNSPPSQG--------TTITHPDTTKGKTYRGRQLRTRRTSPKAWG- 232 P P PR + P PPS G T+ T TT ++ +R SP A G Sbjct: 165 PTAPTPRSANKPSSPVPPSAGGKDPRAGQTSTTSKATTVSGGGPRPKIVSRPQSPTAPGR 224 Query: 233 TPPPAIPFLHSRARTP 280 + PPA P + S + P Sbjct: 225 SAPPAKPSIPSERKAP 240
>B1_FHV (P68829) Protein B1| Length = 102 Score = 28.9 bits (63), Expect = 9.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +2 Query: 170 KGKTYRGRQLRTRRTSPKAWGTPPPA 247 +GK RG + TRRT PKA P P+ Sbjct: 73 RGKGPRGGKTNTRRTPPKAGAQPQPS 98
>B1_BBV (P68828) Protein B1| Length = 102 Score = 28.9 bits (63), Expect = 9.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +2 Query: 170 KGKTYRGRQLRTRRTSPKAWGTPPPA 247 +GK RG + TRRT PKA P P+ Sbjct: 73 RGKGPRGGKTNTRRTPPKAGAQPQPS 98
>NLGN3_RAT (Q62889) Neuroligin-3 precursor (Gliotactin homolog)| Length = 848 Score = 28.9 bits (63), Expect = 9.5 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +2 Query: 92 VPRFCSIPPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAIPFLHSRA 271 VP ++ + S T + PDTT TRR + K W T PAI +S Sbjct: 628 VPHLYNLHDMFHYTSTTTKVPPPDTTHSSHI------TRRPNGKTWSTKRPAISPAYSNE 681 Query: 272 RTPAT 286 P + Sbjct: 682 NAPGS 686
>NLGN3_MOUSE (Q8BYM5) Neuroligin-3 precursor (Gliotactin homolog)| Length = 825 Score = 28.9 bits (63), Expect = 9.5 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +2 Query: 92 VPRFCSIPPLNSPPSQGTTITHPDTTKGKTYRGRQLRTRRTSPKAWGTPPPAIPFLHSRA 271 VP ++ + S T + PDTT TRR + K W T PAI +S Sbjct: 605 VPHLYNLHDMFHYTSTTTKVPPPDTTHSSHI------TRRPNGKTWSTKRPAISPAYSNE 658 Query: 272 RTPAT 286 P + Sbjct: 659 NAPGS 663
>RAI1_MOUSE (Q61818) Retinoic acid-induced protein 1| Length = 1889 Score = 28.9 bits (63), Expect = 9.5 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 18/86 (20%) Frame = +2 Query: 50 GPQQKEQSDGPFPP-------VPRFC-------SIPPLNSPPSQGTTITHPDTTKGKTYR 187 GP Q Q++G P +PR C S P PP TT T PD GK Sbjct: 1015 GPPQG-QAEGAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRA 1073 Query: 188 GRQ--LRTRRTSPKAWGTP--PPAIP 253 + R + SPKA +P P A+P Sbjct: 1074 AFKSGKRVGKPSPKAASSPSNPAALP 1099
>BRO1_DEBHA (Q6BRL3) Vacuolar protein-sorting protein BRO1 (BRO domain-containing| protein 1) Length = 970 Score = 28.9 bits (63), Expect = 9.5 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Frame = +2 Query: 44 SFGPQQKEQSDGPFPPVPRFCSIPPL---NSPPSQGTTITHPDTTKGKTYRGRQLRTRRT 214 S+ P +QS P F S P N PP + H +T G Sbjct: 829 SYRPSYGDQSGTPQYNASHFSSNSPSLNHNLPPQYSQSSLHRSSTGGSFASHHS----NE 884 Query: 215 SPKAWGTPPPAIP 253 SP ++ PPPA+P Sbjct: 885 SPGSYSRPPPALP 897
>RDRP_FHV (Q66929) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 998 Score = 28.9 bits (63), Expect = 9.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +2 Query: 170 KGKTYRGRQLRTRRTSPKAWGTPPPA 247 +GK RG + TRRT PKA P P+ Sbjct: 969 RGKGPRGGKTNTRRTPPKAGAQPQPS 994
>RDRP_BBV (Q96631) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 998 Score = 28.9 bits (63), Expect = 9.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +2 Query: 170 KGKTYRGRQLRTRRTSPKAWGTPPPA 247 +GK RG + TRRT PKA P P+ Sbjct: 969 RGKGPRGGKTNTRRTPPKAGAQPQPS 994
>M4K5_HUMAN (Q9Y4K4) Mitogen-activated protein kinase kinase kinase kinase 5| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 5) (MEK kinase kinase 5) (MEKKK 5) (Kinase homologous to SPS1/STE20) (KHS) Length = 846 Score = 28.9 bits (63), Expect = 9.5 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +2 Query: 80 PFPPVPRFCSIPPLNSPPSQ-GTTITH-PDTTKGKTYRGRQLRTRRTSP 220 P PP PR S P N P + +TI H PD+ R Q+ R++SP Sbjct: 391 PLPPKPRISSYPEDNFPDEEKASTIKHCPDSES----RAPQILRRQSSP 435 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,089,393 Number of Sequences: 219361 Number of extensions: 1290479 Number of successful extensions: 5498 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5470 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
