ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25c05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U33318.1|ZMU33318 Zea mays sulfur starvation induced isoflavone reductase-like IRL (IRL) mRNA, complete cds Length = 1325 Score = 371 bits (187), Expect = 2e-99 Identities = 376/439 (85%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 |||||||||||||| ||| ||||||| ||||| ||| | |||| ||||||||| |||||| Sbjct: 46 aagagcaagatcctggtggtcggcggcacggggtacctgggcaggcacgtcgtggcggcg 105 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| |||||||||||| |||||||||| ||||||| || || ||||||||| Sbjct: 106 agcgcgcggctgggccaccccacctcggcgctcgtcagggacacggcgccgtccgacccg 165 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 ||||| ||| ||||||||||| |||||||||| | ||||| |||||||||||||||||| Sbjct: 166 gccaaagcggcgctgctcaagagcttccaggacgccggcgtgacgctcctcaagggcgac 225 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 ||||||||||| | |||||||||||||| || |||| || ||||| ||||||||| | Sbjct: 226 ctgtacgaccaggctagcctggtgagcgcggtgaagggcgcggacgtggtcatctccgtg 285 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || || |||||||||||||||| |||| | |||| ||| |||||||||||||||||| Sbjct: 286 ctcggatcgatgcagatcgccgaccagagccggctcgtcgacgccatcaaggaggccgga 345 Query: 380 aacgtgaagaggttcttcccgtcggagttcgggctggacgtcgaccgtaccggcgccgtg 439 ||||| |||||||||||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 346 aacgtcaagaggttcttcccgtcggagttcggcctggacgtggaccgcacgggcatcgtg 405 Query: 440 gagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggcgag 499 |||||||||||||||||| | | | ||||| |||||||||||| |||| ||||| || | Sbjct: 406 gagccggccaagtccatcctaggcgccaaggtgggcatccgccgcgccaccgaggccgcg 465 Query: 500 gacatcccctacacctacg 518 | ||| ||||||||||||| Sbjct: 466 ggcataccctacacctacg 484
>gb|AY110531.1| Zea mays CL1726_-1 mRNA sequence Length = 1315 Score = 274 bits (138), Expect = 3e-70 Identities = 261/302 (86%) Strand = Plus / Plus Query: 156 accccaccctggcgctcgtccgggacaccgccccctccgacccggccaaggcgcagctgc 215 |||||||| |||||||||| ||||||| || || |||||||||||||| ||| ||||| Sbjct: 122 accccacctcggcgctcgtcagggacacggcgccgtccgacccggccaaagcggcgctgc 181 Query: 216 tcaagaccttccaggactcgggcgtcacgctcctcaagggcgacctgtacgaccacggca 275 |||||| |||||||||| | ||||| ||||||||||||||||||||||||||||| | | Sbjct: 182 tcaagagcttccaggacgccggcgtgacgctcctcaagggcgacctgtacgaccaggcta 241 Query: 276 gcctggtgagcgccgttaaggcggccgacgtcgtcatctccacgctgggcgcgatgcaga 335 ||||||||||||| || |||| || ||||| ||||||||| ||| || ||||||||| Sbjct: 242 gcctggtgagcgcggtgaagggcgcggacgtggtcatctccgtgctcggatcgatgcaga 301 Query: 336 tcgccgagcagaccaagctcatcgccgccatcaaggaggccggcaacgtgaagaggttct 395 ||||||| |||| | |||| ||| |||||||||||||||||| ||||| |||||||||| Sbjct: 302 tcgccgaccagagccggctcgtcgacgccatcaaggaggccggaaacgtcaagaggttct 361 Query: 396 tcccgtcggagttcgggctggacgtcgaccgtaccggcgccgtggagccggccaagtcca 455 |||||||||||||||| |||||||| ||||| || ||| |||||||||||||||||||| Sbjct: 362 tcccgtcggagttcggcctggacgtggaccgcacgggcatcgtggagccggccaagtcca 421 Query: 456 tc 457 || Sbjct: 422 tc 423 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgt 132 |||||||||||||| ||| ||||||| ||||| ||| | |||| ||||||||| Sbjct: 46 aagagcaagatcctggtggtcggcggcacggggtacctgggcaggcacgtcgt 98
>ref|NM_183485.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1207 Score = 246 bits (124), Expect = 7e-62 Identities = 321/387 (82%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| | ||||| ||||| ||||||||| |||||||||| ||| Sbjct: 78 aagagcaggatcctggtggtgggcggcacggggtacatcggccggcacgtcgtcttggcc 137 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| | ||||||||||||| Sbjct: 138 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctctccccctccgacccc 197 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||| ||||||| ||| ||| ||||| ||| | |||||||| |||||| | |||||| Sbjct: 198 gccaagtcgcagcttctccagagcttccgcgacgccggcgtcaccctcctccacggcgac 257 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || |||||||||| ||||||| | |||||||| | ||||||||||||||||||||| Sbjct: 258 ctctacgaccacgccagcctgctcagcgccgtccgcgacgccgacgtcgtcatctccacg 317 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggcc--- 376 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 318 ctgggcgcgctgcagatcgccgaccagaccaagctcatcgccgccatcaaggagggcggc 377 Query: 377 ---ggcaacgtgaagaggttcttcccgtcggagttcgggctggacgtcgaccgtaccggc 433 ||||||||| ||||||| | ||||||||||||||||||||| |||| || ||| Sbjct: 378 ggtggcaacgtgcggaggttcctgccgtcggagttcgggctggacccggaccacacgggc 437 Query: 434 gccgtggagccggccaagtccatcttc 460 || ||||||||||||| |||||||||| Sbjct: 438 gcggtggagccggccaggtccatcttc 464 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 509 tacacctacgtggtggccaactacttcgccgggtactcgctccccaccatcgggcag 565 ||||| ||||||||| |||||||||||||||| ||| |||| || || ||||||||| Sbjct: 513 tacacgtacgtggtgtccaactacttcgccggctacgcgctgccgacgatcgggcag 569
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 246 bits (124), Expect = 7e-62 Identities = 321/387 (82%), Gaps = 6/387 (1%) Strand = Plus / Minus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| | ||||| ||||| ||||||||| |||||||||| ||| Sbjct: 327374 aagagcaggatcctggtggtgggcggcacggggtacatcggccggcacgtcgtcttggcc 327315 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| | ||||||||||||| Sbjct: 327314 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctctccccctccgacccc 327255 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||| ||||||| ||| ||| ||||| ||| | |||||||| |||||| | |||||| Sbjct: 327254 gccaagtcgcagcttctccagagcttccgcgacgccggcgtcaccctcctccacggcgac 327195 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || |||||||||| ||||||| | |||||||| | ||||||||||||||||||||| Sbjct: 327194 ctctacgaccacgccagcctgctcagcgccgtccgcgacgccgacgtcgtcatctccacg 327135 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggcc--- 376 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 327134 ctgggcgcgctgcagatcgccgaccagaccaagctcatcgccgccatcaaggagggcggc 327075 Query: 377 ---ggcaacgtgaagaggttcttcccgtcggagttcgggctggacgtcgaccgtaccggc 433 ||||||||| ||||||| | ||||||||||||||||||||| |||| || ||| Sbjct: 327074 ggtggcaacgtgcggaggttcctgccgtcggagttcgggctggacccggaccacacgggc 327015 Query: 434 gccgtggagccggccaagtccatcttc 460 || ||||||||||||| |||||||||| Sbjct: 327014 gcggtggagccggccaggtccatcttc 326988 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Minus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 322816 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 322757 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 322756 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 322697 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 322696 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 322637 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 322636 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 322577 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 322576 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 322517 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 509 tacacctacgtggtggccaactacttcgccgggtactcgctccccaccatcgggcag 565 ||||| ||||||||| |||||||||||||||| ||| |||| || || ||||||||| Sbjct: 326939 tacacgtacgtggtgtccaactacttcgccggctacgcgctgccgacgatcgggcag 326883 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Minus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 322447 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 322388 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 322387 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 322344
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 246 bits (124), Expect = 7e-62 Identities = 321/387 (82%), Gaps = 6/387 (1%) Strand = Plus / Minus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| | ||||| ||||| ||||||||| |||||||||| ||| Sbjct: 79212 aagagcaggatcctggtggtgggcggcacggggtacatcggccggcacgtcgtcttggcc 79153 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| | ||||||||||||| Sbjct: 79152 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctctccccctccgacccc 79093 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||| ||||||| ||| ||| ||||| ||| | |||||||| |||||| | |||||| Sbjct: 79092 gccaagtcgcagcttctccagagcttccgcgacgccggcgtcaccctcctccacggcgac 79033 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || |||||||||| ||||||| | |||||||| | ||||||||||||||||||||| Sbjct: 79032 ctctacgaccacgccagcctgctcagcgccgtccgcgacgccgacgtcgtcatctccacg 78973 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggcc--- 376 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 78972 ctgggcgcgctgcagatcgccgaccagaccaagctcatcgccgccatcaaggagggcggc 78913 Query: 377 ---ggcaacgtgaagaggttcttcccgtcggagttcgggctggacgtcgaccgtaccggc 433 ||||||||| ||||||| | ||||||||||||||||||||| |||| || ||| Sbjct: 78912 ggtggcaacgtgcggaggttcctgccgtcggagttcgggctggacccggaccacacgggc 78853 Query: 434 gccgtggagccggccaagtccatcttc 460 || ||||||||||||| |||||||||| Sbjct: 78852 gcggtggagccggccaggtccatcttc 78826 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Minus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 74654 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 74595 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 74594 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 74535 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 74534 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 74475 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 74474 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 74415 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 74414 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 74355 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 509 tacacctacgtggtggccaactacttcgccgggtactcgctccccaccatcgggcag 565 ||||| ||||||||| |||||||||||||||| ||| |||| || || ||||||||| Sbjct: 78777 tacacgtacgtggtgtccaactacttcgccggctacgcgctgccgacgatcgggcag 78721 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Minus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 74285 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 74226 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 74225 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 74182
>dbj|AK109339.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E10, full insert sequence Length = 1206 Score = 246 bits (124), Expect = 7e-62 Identities = 321/387 (82%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| | ||||| ||||| ||||||||| |||||||||| ||| Sbjct: 77 aagagcaggatcctggtggtgggcggcacggggtacatcggccggcacgtcgtcttggcc 136 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| | ||||||||||||| Sbjct: 137 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctctccccctccgacccc 196 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||| ||||||| ||| ||| ||||| ||| | |||||||| |||||| | |||||| Sbjct: 197 gccaagtcgcagcttctccagagcttccgcgacgccggcgtcaccctcctccacggcgac 256 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || |||||||||| ||||||| | |||||||| | ||||||||||||||||||||| Sbjct: 257 ctctacgaccacgccagcctgctcagcgccgtccgcgacgccgacgtcgtcatctccacg 316 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggcc--- 376 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 317 ctgggcgcgctgcagatcgccgaccagaccaagctcatcgccgccatcaaggagggcggc 376 Query: 377 ---ggcaacgtgaagaggttcttcccgtcggagttcgggctggacgtcgaccgtaccggc 433 ||||||||| ||||||| | ||||||||||||||||||||| |||| || ||| Sbjct: 377 ggtggcaacgtgcggaggttcctgccgtcggagttcgggctggacccggaccacacgggc 436 Query: 434 gccgtggagccggccaagtccatcttc 460 || ||||||||||||| |||||||||| Sbjct: 437 gcggtggagccggccaggtccatcttc 463 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 509 tacacctacgtggtggccaactacttcgccgggtactcgctccccaccatcgggcag 565 ||||| ||||||||| |||||||||||||||| ||| |||| || || ||||||||| Sbjct: 512 tacacgtacgtggtgtccaactacttcgccggctacgcgctgccgacgatcgggcag 568
>dbj|AK102701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103L17, full insert sequence Length = 1207 Score = 246 bits (124), Expect = 7e-62 Identities = 321/387 (82%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| | ||||| ||||| ||||||||| |||||||||| ||| Sbjct: 78 aagagcaggatcctggtggtgggcggcacggggtacatcggccggcacgtcgtcttggcc 137 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| | ||||||||||||| Sbjct: 138 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctctccccctccgacccc 197 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||| ||||||| ||| ||| ||||| ||| | |||||||| |||||| | |||||| Sbjct: 198 gccaagtcgcagcttctccagagcttccgcgacgccggcgtcaccctcctccacggcgac 257 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || |||||||||| ||||||| | |||||||| | ||||||||||||||||||||| Sbjct: 258 ctctacgaccacgccagcctgctcagcgccgtccgcgacgccgacgtcgtcatctccacg 317 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggcc--- 376 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 318 ctgggcgcgctgcagatcgccgaccagaccaagctcatcgccgccatcaaggagggcggc 377 Query: 377 ---ggcaacgtgaagaggttcttcccgtcggagttcgggctggacgtcgaccgtaccggc 433 ||||||||| ||||||| | ||||||||||||||||||||| |||| || ||| Sbjct: 378 ggtggcaacgtgcggaggttcctgccgtcggagttcgggctggacccggaccacacgggc 437 Query: 434 gccgtggagccggccaagtccatcttc 460 || ||||||||||||| |||||||||| Sbjct: 438 gcagtggagccggccaggtccatcttc 464 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 509 tacacctacgtggtggccaactacttcgccgggtactcgctccccaccatcgggcag 565 ||||| ||||||||| |||||||||||||||| ||| |||| || || ||||||||| Sbjct: 513 tacacgtacgtggtgtccaactacttcgccggctacgcgctgccgacgatcgggcag 569
>gb|AY071920.1| Oryza sativa isoflavone reductase-like protein mRNA, complete cds Length = 1203 Score = 230 bits (116), Expect = 4e-57 Identities = 319/387 (82%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| | ||||| ||||| ||||||||| |||||||||| ||| Sbjct: 75 aagagcaggatcctggtggtgggcggcacggggtacatcggccggcacgtcgtcttggcc 134 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| | ||||||||||||| Sbjct: 135 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctctccccctccgacccc 194 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||| ||||||| ||| ||| ||||| ||| | |||||||| |||||| | |||||| Sbjct: 195 gccaagtcgcagcttctccagagcttccgcgacgccggcgtcaccctcctccacggcgac 254 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || |||||||||| ||||||| | |||||||| | ||||||||||||||||||||| Sbjct: 255 ctctacgaccacgccagcctgctcagcgccgtccgcgacgccgacgtcgtcatctccacg 314 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggcc--- 376 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 315 ctgggcgcgctgcagatcgccgaccagaccaagctcatcgccgccatcaaggagggcggc 374 Query: 377 ---ggcaacgtgaagaggttcttcccgtcggagttcgggctggacgtcgaccgtaccggc 433 ||||||||| ||||||| | ||||||||||||||||||||| |||| || ||| Sbjct: 375 ggtggcaacgtgcggaggttcctgccgtcggagttcgggctggacccggaccacacgggc 434 Query: 434 gccgtggagccggccaagtccatcttc 460 || |||||||| | || |||||||||| Sbjct: 435 gcggtggagcccggcaggtccatcttc 461 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 509 tacacctacgtggtggccaactacttcgccgggtactcgctccccaccatcgggcag 565 ||||| ||||||||| |||||||||||||||| ||| |||| || || ||||||||| Sbjct: 510 tacacgtacgtggtgtccaactacttcgccggctacgcgctgccgacgatcgggcag 566
>ref|NM_183484.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1256 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 93 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 152 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 153 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 212 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 213 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 272 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 273 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 332 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 333 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 392 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 462 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 521 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 522 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 565
>dbj|AK119550.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E04, full insert sequence Length = 1265 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 97 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 156 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 157 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 216 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 217 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 276 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 277 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 336 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 337 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 396 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 466 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 525 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 526 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 569
>dbj|AK104735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D01, full insert sequence Length = 1260 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 97 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 156 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 157 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 216 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 217 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 276 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 277 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 336 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 337 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 396 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 466 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 525 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 526 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 569
>dbj|AK104669.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-B02, full insert sequence Length = 1256 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 93 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 152 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 153 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 212 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 213 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 272 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 273 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 332 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 333 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 392 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 462 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 521 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 522 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 565
>dbj|AK104238.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H12, full insert sequence Length = 1260 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 97 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 156 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 157 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 216 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 217 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 276 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 277 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 336 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 337 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 396 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 466 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 525 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 526 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 569
>dbj|AK104189.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C06, full insert sequence Length = 1259 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 97 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 156 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 157 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 216 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 217 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 276 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 277 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 336 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 337 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 396 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 466 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 525 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 526 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 569
>dbj|AK098946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045H04, full insert sequence Length = 1256 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 109 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 168 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 169 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 228 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 229 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 288 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 289 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 348 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 349 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 408 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 478 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 537 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 538 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 581
>dbj|AK061325.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G05, full insert sequence Length = 1265 Score = 182 bits (92), Expect = 9e-43 Identities = 248/300 (82%) Strand = Plus / Plus Query: 80 aagagcaagatccttgtgatcggcgggacgggttacatcggcaagcacgtcgtcgcggcg 139 ||||||| |||||| ||| ||||||| ||||| ||||||||| ||| ||||| || ||| Sbjct: 97 aagagcaggatcctggtggtcggcggcacggggtacatcggccggcatgtcgttgccgcg 156 Query: 140 agcgcccggctcggccaccccaccctggcgctcgtccgggacaccgccccctccgacccg 199 ||||| ||||| || || |||||| || |||||| ||||| ||||||||||||||| Sbjct: 157 agcgcgcggctgggtcatcccaccaccgccctcgtcagggacctcgccccctccgacccc 216 Query: 200 gccaaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgac 259 |||||||||||||||||| | ||||||| ||| | |||||||| |||||| | |||||| Sbjct: 217 gccaaggcgcagctgctccacaccttccgcgacgccggcgtcaccctcctccacggcgac 276 Query: 260 ctgtacgaccacggcagcctggtgagcgccgttaaggcggccgacgtcgtcatctccacg 319 || ||||||||| ||||||| || ||||||| | |||||||||||||||||| || Sbjct: 277 ctccacgaccacgccagcctgctgcgcgccgtccgcgacgccgacgtcgtcatctccgcg 336 Query: 320 ctgggcgcgatgcagatcgccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 || |||||| ||| || |||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 337 gtgcgcgcgacccaggtccccgaccagaccaggctcatcgacgccatcaaggaggccggc 396 Score = 40.1 bits (20), Expect = 8.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 437 gtggagccggccaagtccatcttcgccatcaaggcgggcatccgccgtgccatcgagggc 496 |||||||||| || |||||| | || || ||||| ||||||||| || ||| | |||| Sbjct: 466 gtggagccggtcaggtccatgtacggcagcaaggtgggcatccggcgcgccgtggaggcg 525 Query: 497 gaggacatcccctacacctacgtggtggccaactacttcgccgg 540 | || |||||| |||| ||||||| | ||||||||||||||| Sbjct: 526 gcgggcatcccgcacacgtacgtggcgtgcaactacttcgccgg 569
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 299 gccgacgtcgtcatctccacgctgggcgcgatgcagatcgccgagcagaccaagctcatc 358 ||||||| ||||||||||||| || |||||| || ||| |||| ||||||||||||||| Sbjct: 47788 gccgacgccgtcatctccacggtgcgcgcgacccatatccccgaccagaccaagctcatc 47729 Query: 359 gccgccatcaaggaggccggc 379 | ||||||||||||||||||| Sbjct: 47728 gacgccatcaaggaggccggc 47708
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 299 gccgacgtcgtcatctccacgctgggcgcgatgcagatcgccgagcagaccaagctcatc 358 ||||||| ||||||||||||| || |||||| || ||| |||| ||||||||||||||| Sbjct: 15192155 gccgacgccgtcatctccacggtgcgcgcgacccatatccccgaccagaccaagctcatc 15192096 Query: 359 gccgccatcaaggaggccggc 379 | ||||||||||||||||||| Sbjct: 15192095 gacgccatcaaggaggccggc 15192075
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 299 gccgacgtcgtcatctccacgctgggcgcgatgcagatcgccgagcagaccaagctcatc 358 ||||||| ||||||||||||| || |||||| || ||| |||| ||||||||||||||| Sbjct: 15273654 gccgacgccgtcatctccacggtgcgcgcgacccatatccccgaccagaccaagctcatc 15273595 Query: 359 gccgccatcaaggaggccggc 379 | ||||||||||||||||||| Sbjct: 15273594 gacgccatcaaggaggccggc 15273574
>dbj|AK109944.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-G12, full insert sequence Length = 1162 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 354 tcatcgccgccatcaaggaggccggcaacgtgaagaggttcttcccgtcggagttcgg 411 ||||||||||||||||||||||||| ||| | ||||||||| |||||||||| ||||| Sbjct: 399 tcatcgccgccatcaaggaggccggaaacatcaagaggttcatcccgtcggatttcgg 456
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 299 gccgacgtcgtcatctccacgctgggcgcgatgcagatcgccgagcagaccaagctcatc 358 ||||||| |||||||||| || || ||||| ||| || |||| ||||||||||||||| Sbjct: 122443 gccgacgccgtcatctccgcggtgctcgcgacccaggtccccgaccagaccaagctcatc 122502 Query: 359 gccgccatcaaggaggccggc 379 | |||||||||||||||||| Sbjct: 122503 gatgccatcaaggaggccggc 122523
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 299 gccgacgtcgtcatctccacgctgggcgcgatgcagatcgccgagcagaccaagctcatc 358 ||||||| |||||||||| || || ||||| ||| || |||| ||||||||||||||| Sbjct: 140950 gccgacgccgtcatctccgcggtgctcgcgacccaggtccccgaccagaccaagctcatc 140891 Query: 359 gccgccatcaaggaggccggc 379 | |||||||||||||||||| Sbjct: 140890 gatgccatcaaggaggccggc 140870
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 299 gccgacgtcgtcatctccacgctgggcgcgatgcagatcgccgagcagaccaagctcatc 358 ||||||| |||||||||| || || ||||| ||| || |||| ||||||||||||||| Sbjct: 22545703 gccgacgccgtcatctccgcggtgctcgcgacccaggtccccgaccagaccaagctcatc 22545644 Query: 359 gccgccatcaaggaggccggc 379 | |||||||||||||||||| Sbjct: 22545643 gatgccatcaaggaggccggc 22545623 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 5601737 gctcatcgacgccatcaaggaggccgg 5601711
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 299 gccgacgtcgtcatctccacgctgggcgcgatgcagatcgccgagcagaccaagctcatc 358 ||||||| |||||||||| || || ||||| ||| || |||| ||||||||||||||| Sbjct: 22538732 gccgacgccgtcatctccgcggtgctcgcgacccaggtccccgaccagaccaagctcatc 22538673 Query: 359 gccgccatcaaggaggccggc 379 | |||||||||||||||||| Sbjct: 22538672 gatgccatcaaggaggccggc 22538652 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 5600952 gctcatcgacgccatcaaggaggccgg 5600926
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 339 ccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 |||| ||| |||||||||||| ||||||||||||||||||| Sbjct: 27242524 ccgaccagcccaagctcatcgacgccatcaaggaggccggc 27242564
>dbj|AP006456.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0030A22 Length = 141096 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 339 ccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 |||| ||| |||||||||||| ||||||||||||||||||| Sbjct: 34392 ccgaccagcccaagctcatcgacgccatcaaggaggccggc 34432
>dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0084D17 Length = 143931 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 339 ccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 |||| ||| |||||||||||| ||||||||||||||||||| Sbjct: 107743 ccgaccagcccaagctcatcgacgccatcaaggaggccggc 107783
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccggca 380 |||||||| |||||||||||||||||||| Sbjct: 133381 gctcatcgacgccatcaaggaggccggca 133353
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccggca 380 |||||||| |||||||||||||||||||| Sbjct: 5146 gctcatcgacgccatcaaggaggccggca 5118
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 354 tcatcgccgccatcaaggaggccgg 378 ||||||||||||||||||||||||| Sbjct: 16028466 tcatcgccgccatcaaggaggccgg 16028442 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 339 ccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 |||| ||||||||||||||| |||||||| |||||||||| Sbjct: 10987882 ccgaccagaccaagctcatcaacgccatcatggaggccggc 10987922
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccggca 380 |||||||| |||||||||||||||||||| Sbjct: 25270540 gctcatcgacgccatcaaggaggccggca 25270512 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 202 caaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgacct 261 |||||||||||||||| | | ||||| || | |||||||| |||||| | |||||||| Sbjct: 10929360 caaggcgcagctgctccaaagcttccgcaacgccggcgtcaccctcctccatggcgacct 10929301 Query: 262 gtacgaccacg 272 |||||||||| Sbjct: 10929300 ctacgaccacg 10929290
>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0501G08 Length = 173505 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 339 ccgagcagaccaagctcatcgccgccatcaaggaggccggc 379 |||| ||||||||||||||| |||||||| |||||||||| Sbjct: 71964 ccgaccagaccaagctcatcaacgccatcatggaggccggc 72004
>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0618D11 Length = 150103 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 354 tcatcgccgccatcaaggaggccgg 378 ||||||||||||||||||||||||| Sbjct: 57195 tcatcgccgccatcaaggaggccgg 57171
>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1003C07, from chromosome 10, complete sequence Length = 115188 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| ||||||||||||||||||| Sbjct: 85598 gctcatcgacgccatcaaggaggccggc 85571
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| ||||||||||||||||||| Sbjct: 9609401 gctcatcgacgccatcaaggaggccggc 9609428
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| ||||||||||||||||||| Sbjct: 11073459 gctcatcgacgccatcaaggaggccggc 11073486
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| ||||||||||||||||||| Sbjct: 379666 gctcatcgacgccatcaaggaggccggc 379693
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| ||||||||||||||||||| Sbjct: 89180 gctcatcgacgccatcaaggaggccggc 89207
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| ||||||||||||||||||| Sbjct: 11079899 gctcatcgacgccatcaaggaggccggc 11079926
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| ||||||||||||||||||| Sbjct: 9609286 gctcatcgacgccatcaaggaggccggc 9609313
>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165137 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| ||||||||||||||||||| Sbjct: 72712 gctcatcgacgccatcaaggaggccggc 72739
>ref|XM_472318.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 397 gctcatcgacgccatcaaggaggccgg 423
>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBb0061M13, complete sequence Length = 174910 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 202 caaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgacct 261 |||||||||||||||| | | ||||| || | |||||||| |||||| | |||||||| Sbjct: 98564 caaggcgcagctgctccaaagcttccgcaacgccggcgtcaccctcctccatggcgacct 98505 Query: 262 gtacgaccacg 272 |||||||||| Sbjct: 98504 ctacgaccacg 98494
>emb|AJ849358.1| Linum album mRNA for pinoresinol-lariciresinol reductase (plr1 gene) Length = 1482 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 349 caagctcatcgccgccatcaaggaggccggcaacgtgaagaggttcttcccgtcggagtt 408 ||||||| ||| |||||||| || ||||| ||||| |||||||| | ||||||||||| Sbjct: 440 caagctcgtcgaagccatcaaagaagccggtaacgtcaagaggtttgtgccgtcggagtt 499 Query: 409 cgg 411 ||| Sbjct: 500 cgg 502
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 87889 gctcatcgacgccatcaaggaggccgg 87863
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 145269 gctcatcgacgccatcaaggaggccgg 145243
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 19434326 gctcatcgacgccatcaaggaggccgg 19434300 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| |||||||||||||| |||| Sbjct: 6964810 gctcatcgacgccatcaaggaggtcggc 6964837 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggc 375 |||||||| ||||||||||||||| Sbjct: 6913403 gctcatcgacgccatcaaggaggc 6913380
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 10318713 gctcatcgacgccatcaaggaggccgg 10318687 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 ccaagctcatcgccgccatcaaggaggcc 376 |||||||| |||||||||||| ||||||| Sbjct: 27906542 ccaagctcctcgccgccatcagggaggcc 27906514 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cgccccctccgacccggcca 203 |||||||||||||||||||| Sbjct: 34932530 cgccccctccgacccggcca 34932549
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 65436 gctcatcgacgccatcaaggaggccgg 65410
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggccgg 378 |||||||| |||||||||||||||||| Sbjct: 84523 gctcatcgacgccatcaaggaggccgg 84497
>dbj|AK110636.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-C04, full insert sequence Length = 776 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 202 caaggcgcagctgctcaagaccttccaggactcgggcgtcacgctcctcaagggcgacct 261 |||||||||||||||| | | ||||| || | |||||||| |||||| | |||||||| Sbjct: 581 caaggcgcagctgctccaaagcttccgcaacgccggcgtcaccctcctccatggcgacct 522 Query: 262 gtacgaccacg 272 |||||||||| Sbjct: 521 ctacgaccacg 511
>ref|XM_367049.1| Magnaporthe grisea 70-15 chromosome V predicted protein (MG10679.4) partial mRNA Length = 477 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 355 catcgccgccatcaaggaggcc 376 |||||||||||||||||||||| Sbjct: 195 catcgccgccatcaaggaggcc 216
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 gcgctcgtccgggacaccgccc 188 |||||||||||||||||||||| Sbjct: 224738 gcgctcgtccgggacaccgccc 224759
>gb|AY657037.1| Synthetic construct Peudomonas aeruginosa clone FLH031774.01F PA0909 gene, partial cds Length = 276 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 atgcagatcgccgagcagacca 350 |||||||||||||||||||||| Sbjct: 53 atgcagatcgccgagcagacca 32
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 cgccatcaaggaggccggcaac 382 |||||||||||||||||||||| Sbjct: 110887 cgccatcaaggaggccggcaac 110908
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 cgccatcaaggaggccggcaac 382 |||||||||||||||||||||| Sbjct: 114844 cgccatcaaggaggccggcaac 114865
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 cgccatcaaggaggccggcaac 382 |||||||||||||||||||||| Sbjct: 341824 cgccatcaaggaggccggcaac 341845
>gb|AE004525.1| Pseudomonas aeruginosa PAO1, section 86 of 529 of the complete genome Length = 10434 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 atgcagatcgccgagcagacca 350 |||||||||||||||||||||| Sbjct: 4343 atgcagatcgccgagcagacca 4322
>ref|XM_367588.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07499.4) partial mRNA Length = 3114 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 ccggccaaggcgcagctgctc 217 ||||||||||||||||||||| Sbjct: 35 ccggccaaggcgcagctgctc 55
>emb|AJ849359.1| Linum usitatissimum mRNA for pinoresinol-lariciresinol reductase (plr1 gene) Length = 939 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 362 gccatcaaggaggccggcaacgtgaagaggttcttcccgtcggagttcgggctggac 418 |||||||| |||||||| || || ||||| ||| | || |||||||||||| ||||| Sbjct: 298 gccatcaaagaggccggaaatgttaagagattcattccatcggagttcgggatggac 354
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 gctgggcgcgatgcagatcgccgagcaga 347 |||||||||||||||||| ||||||||| Sbjct: 344215 gctgggcgcgatgcagatttccgagcaga 344187
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gcgacctgtacgaccacggca 275 ||||||||||||||||||||| Sbjct: 67034 gcgacctgtacgaccacggca 67054
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 ccaagctcatcgccgccatcaaggaggcc 376 |||||||| |||||||||||| ||||||| Sbjct: 33994 ccaagctcctcgccgccatcagggaggcc 33966
>gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174195 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 gagagcaagcaagccaacaag 25 ||||||||||||||||||||| Sbjct: 146117 gagagcaagcaagccaacaag 146137
>dbj|AK107937.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A09, full insert sequence Length = 1039 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 348 ccaagctcatcgccgccatcaaggaggcc 376 |||||||| |||||||||||| ||||||| Sbjct: 202 ccaagctcctcgccgccatcagggaggcc 230
>gb|AF021263.1|AF021263 Streptomyces roseosporus daptomycin biosynthetic protein subunit gene, partial cds Length = 4771 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gcgacctgtacgaccacggca 275 ||||||||||||||||||||| Sbjct: 4115 gcgacctgtacgaccacggca 4135
>ref|XM_468378.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1493 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cgccccctccgacccggcca 203 |||||||||||||||||||| Sbjct: 324 cgccccctccgacccggcca 343
>gb|AF264948.1| Erwinia amylovora plasmid pEA29, complete sequence Length = 28185 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccacgctgggcgcgatgcag 334 |||||||||||||||||||| Sbjct: 11951 ccacgctgggcgcgatgcag 11932
>gb|AY123045.1| Erwinia pyrifoliae strain Ep1/96 plasmid pEP36, complete sequence Length = 35904 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccacgctgggcgcgatgcag 334 |||||||||||||||||||| Sbjct: 13937 ccacgctgggcgcgatgcag 13918
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgcggcgagcgcccggctcg 152 |||||||||||||||||||| Sbjct: 48733 cgcggcgagcgcccggctcg 48714
>emb|CR956415.12| Pig DNA sequence from clone PigE-223M7 on chromosome 6, complete sequence Length = 209049 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tcggccaccccaccctggcg 169 |||||||||||||||||||| Sbjct: 156117 tcggccaccccaccctggcg 156098
>gb|AF264950.1|AF264950S1 Erwinia amylovora strain 2-95 plasmid pEA29, partial plasmid sequence Length = 3090 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccacgctgggcgcgatgcag 334 |||||||||||||||||||| Sbjct: 1566 ccacgctgggcgcgatgcag 1547
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 agaccaagctcatcgccgcc 364 |||||||||||||||||||| Sbjct: 2179141 agaccaagctcatcgccgcc 2179122
>gb|AY255829.1| Erwinia sp. Ejp 556 plasmid pEJ30, complete sequence Length = 29593 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccacgctgggcgcgatgcag 334 |||||||||||||||||||| Sbjct: 13910 ccacgctgggcgcgatgcag 13891
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 cggcaagcacgtcgtcgcggcgagcgcc 145 |||||||| ||||||||||||| ||||| Sbjct: 4155108 cggcaagctcgtcgtcgcggcgcgcgcc 4155081
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 gctcatcgccgccatcaaggaggccggc 379 |||||||| |||||||||||||| |||| Sbjct: 127681 gctcatcgacgccatcaaggaggtcggc 127708 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 gctcatcgccgccatcaaggaggc 375 |||||||| ||||||||||||||| Sbjct: 76274 gctcatcgacgccatcaaggaggc 76251
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ccatcttcgccatcaaggcg 472 |||||||||||||||||||| Sbjct: 5364516 ccatcttcgccatcaaggcg 5364535
>gb|L10354.1|SUTCATN Tripneustes gratilla beta-catenin mRNA, complete cds Length = 3061 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 551 cccaccatcgggcaggtcctctcc 574 |||||||||||||||||| ||||| Sbjct: 885 cccaccatcgggcaggtcttctcc 908
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ggcgcgatgcagatcgccga 342 |||||||||||||||||||| Sbjct: 1859611 ggcgcgatgcagatcgccga 1859592
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 cgccatcaaggaggccggca 380 |||||||||||||||||||| Sbjct: 2244954 cgccatcaaggaggccggca 2244973
>ref|XM_680050.1| PREDICTED: Danio rerio similar to Exocyst complex component Sec6 (LOC557069), mRNA Length = 2449 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gcagctgctcaagaccttcc 227 |||||||||||||||||||| Sbjct: 1337 gcagctgctcaagaccttcc 1318
>ref|XM_691137.1| PREDICTED: Danio rerio similar to Exocyst complex component Sec6 (LOC567832), mRNA Length = 2422 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gcagctgctcaagaccttcc 227 |||||||||||||||||||| Sbjct: 1310 gcagctgctcaagaccttcc 1291
>gb|AY898621.1| Suillus bellinii isolate CCMA-22 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 754 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 agaccttccaggactcgggc 238 |||||||||||||||||||| Sbjct: 433 agaccttccaggactcgggc 452
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ccatcttcgccatcaaggcg 472 |||||||||||||||||||| Sbjct: 4856726 ccatcttcgccatcaaggcg 4856745
>emb|AJ419216.1|SBE419216 Suillus bellinii 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), isolate MA-Fungi 47685 Length = 613 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 agaccttccaggactcgggc 238 |||||||||||||||||||| Sbjct: 431 agaccttccaggactcgggc 450
>gb|AC097450.3| Homo sapiens BAC clone CTD-2172F7 from 4, complete sequence Length = 128318 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 tgctcaagaccttccaggac 232 |||||||||||||||||||| Sbjct: 9867 tgctcaagaccttccaggac 9886
>gb|AF166523.1|AF166523 Suillus spraguei strain QXW-2566 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 670 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 agaccttccaggactcgggc 238 |||||||||||||||||||| Sbjct: 218 agaccttccaggactcgggc 199
>gb|AF166522.1|AF166522 Suillus spraguei strain QXW-2435 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 670 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 agaccttccaggactcgggc 238 |||||||||||||||||||| Sbjct: 453 agaccttccaggactcgggc 472
>gb|AF166521.1|AF166521 Suillus spraguei strain QXW-2415 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 674 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 agaccttccaggactcgggc 238 |||||||||||||||||||| Sbjct: 452 agaccttccaggactcgggc 471
>gb|AF166520.1|AF166520 Suillus spraguei strain QXW-2409 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 677 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 agaccttccaggactcgggc 238 |||||||||||||||||||| Sbjct: 452 agaccttccaggactcgggc 471
>gb|AF166519.1|AF166519 Suillus spraguei strain QXW-2362 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 676 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 agaccttccaggactcgggc 238 |||||||||||||||||||| Sbjct: 453 agaccttccaggactcgggc 472
>gb|AF166518.1|AF166518 Suillus spraguei strain GMM-5703 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 568 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 agaccttccaggactcgggc 238 |||||||||||||||||||| Sbjct: 158 agaccttccaggactcgggc 139
>gb|AE004553.1| Pseudomonas aeruginosa PAO1, section 114 of 529 of the complete genome Length = 12453 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cctacgtggtggccaactac 532 |||||||||||||||||||| Sbjct: 2729 cctacgtggtggccaactac 2710
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cgccccctccgacccggcca 203 |||||||||||||||||||| Sbjct: 92027 cgccccctccgacccggcca 92046
>ref|XM_312357.2| Anopheles gambiae str. PEST ENSANGP00000012174 (ENSANGG00000009685), partial mRNA Length = 3144 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 cccgtcggagttcgggctggacgt 420 |||||| ||||||||||||||||| Sbjct: 438 cccgtccgagttcgggctggacgt 461
>dbj|AK109850.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F07, full insert sequence Length = 1493 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cgccccctccgacccggcca 203 |||||||||||||||||||| Sbjct: 324 cgccccctccgacccggcca 343
>tpe|BN000696.1| TPA: TPA_inf: Hordeum vulgare subsp. vulgare mRNA for leucoanthocyanidin reductase (lar gene) Length = 1381 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 374 gccggcaacgtgaagaggttcttcccgtcggagttcgggc 413 ||||||| ||| |||||||| | |||||||||||||||| Sbjct: 351 gccggcaccgtcaagaggtttctgccgtcggagttcgggc 390
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ctccacgctgggcgcgatgc 332 |||||||||||||||||||| Sbjct: 4488941 ctccacgctgggcgcgatgc 4488922
>emb|CR956385.13| Pig DNA sequence from clone CH242-177A17 on chromosome 6, complete sequence Length = 182211 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tcggccaccccaccctggcg 169 |||||||||||||||||||| Sbjct: 96654 tcggccaccccaccctggcg 96673
>gb|U37523.1|SYU37523 Sphingomonas yanoikuyae B1 isocitrate dehydrogenase (idhA) gene and idhX gene, complete cds, and glucosamine synthetase (glmS) gene, partial cds Length = 4295 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 cgctgggcgcgatgcagatc 337 |||||||||||||||||||| Sbjct: 4088 cgctgggcgcgatgcagatc 4107
>emb|AL929309.6| Zebrafish DNA sequence from clone CH211-51L3 in linkage group 25, complete sequence Length = 191745 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gcagctgctcaagaccttcc 227 |||||||||||||||||||| Sbjct: 176016 gcagctgctcaagaccttcc 176035
>emb|CR383674.8| Zebrafish DNA sequence from clone DKEY-17G17 in linkage group 25, complete sequence Length = 212086 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 gcagctgctcaagaccttcc 227 |||||||||||||||||||| Sbjct: 21572 gcagctgctcaagaccttcc 21591
>dbj|AB014770.1| Xanthomonas sp. AK gene for chitinase A, complete cds Length = 2440 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 gcagaccaagctcatcgccgccatcaag 370 ||||||||| ||| |||||||||||||| Sbjct: 1546 gcagaccaacctcgtcgccgccatcaag 1573 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,260,888 Number of Sequences: 3902068 Number of extensions: 3260888 Number of successful extensions: 67997 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 66445 Number of HSP's gapped (non-prelim): 1557 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
