>ref|XM_464533.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1353

 Score =  127 bits (64), Expect = 4e-26
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                       
Query: 370 cccgacgacctcgccatcgcttgcctcatccgcgtgccgcgaggtgatcactgcaagctg 429
           ||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||
Sbjct: 283 cccgacgacctcgccgtggcgtgcctcatccgcgtgccgcgaggtgatcactggaagctg 342

                                                               
Query: 430 aagctcgtgtgcaggaggtggctgcgcctcctcgcgggcaactacttctacg 481
           | ||| |||||||||||||||   || || ||||| ||||||||||||||||
Sbjct: 343 aggctggtgtgcaggaggtggtcccggctgctcgccggcaactacttctacg 394



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 151 gccatggatagacggatccaagctcctctggtcgatagctcggcatgcttgtgcagagcg 210
           |||||||| ||| ||| ||||||||||| ||| |||||||| |||||||||||||||| |
Sbjct: 40  gccatggacagaaggaaccaagctcctccggttgatagctcagcatgcttgtgcagagtg 99

                 
Query: 211 gagaga 216
           ||||||
Sbjct: 100 gagaga 105

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  127 bits (64), Expect = 4e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                           
Query: 370     cccgacgacctcgccatcgcttgcctcatccgcgtgccgcgaggtgatcactgcaagctg 429
               ||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||
Sbjct: 5756441 cccgacgacctcgccgtggcgtgcctcatccgcgtgccgcgaggtgatcactggaagctg 5756382

                                                                   
Query: 430     aagctcgtgtgcaggaggtggctgcgcctcctcgcgggcaactacttctacg 481
               | ||| |||||||||||||||   || || ||||| ||||||||||||||||
Sbjct: 5756381 aggctggtgtgcaggaggtggtcccggctgctcgccggcaactacttctacg 5756330



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 184     gatagctcggcatgcttgtgcagagcggagaga 216
               |||||||| |||||||||||||||| |||||||
Sbjct: 5756651 gatagctcagcatgcttgtgcagagtggagaga 5756619

>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score =  127 bits (64), Expect = 4e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                         
Query: 370   cccgacgacctcgccatcgcttgcctcatccgcgtgccgcgaggtgatcactgcaagctg 429
             ||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||
Sbjct: 45955 cccgacgacctcgccgtggcgtgcctcatccgcgtgccgcgaggtgatcactggaagctg 45896

                                                                 
Query: 430   aagctcgtgtgcaggaggtggctgcgcctcctcgcgggcaactacttctacg 481
             | ||| |||||||||||||||   || || ||||| ||||||||||||||||
Sbjct: 45895 aggctggtgtgcaggaggtggtcccggctgctcgccggcaactacttctacg 45844



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 184   gatagctcggcatgcttgtgcagagcggagaga 216
             |||||||| |||||||||||||||| |||||||
Sbjct: 46165 gatagctcagcatgcttgtgcagagtggagaga 46133

>gb|AE010421.1| Methanopyrus kandleri AV19 section 120 of 157 of the complete genome
          Length = 12174

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 362  ccggccttcccgacgacctcg 382
            |||||||||||||||||||||
Sbjct: 9149 ccggccttcccgacgacctcg 9129

>gb|AC146398.4| Pan troglodytes BAC clone RP43-54K1 from 7, complete sequence
          Length = 185645

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 286   gcctccatccacccactgagc 306
             |||||||||||||||||||||
Sbjct: 54909 gcctccatccacccactgagc 54889

>emb|CR659869.2|CNS0F84J Tetraodon nigroviridis full-length cDNA
          Length = 1105

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 436  gtgtgcaggaggtggctgcgc 456
            |||||||||||||||||||||
Sbjct: 1014 gtgtgcaggaggtggctgcgc 994

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 380     tcgccatcgcttgcctcatc 399
               ||||||||||||||||||||
Sbjct: 2525509 tcgccatcgcttgcctcatc 2525490

>gb|AC091701.3| Trypanosoma brucei chromosome 8 clone RPCI93-26N11, complete sequence
          Length = 142253

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 428    tgaagctcgtgtgcaggagg 447
              ||||||||||||||||||||
Sbjct: 113271 tgaagctcgtgtgcaggagg 113290

>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 428    tgaagctcgtgtgcaggagg 447
              ||||||||||||||||||||
Sbjct: 672184 tgaagctcgtgtgcaggagg 672203

>ref|XM_363748.1| Magnaporthe grisea 70-15 hypothetical protein (MG01674.4) partial
            mRNA
          Length = 4410

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 366  ccttcccgacgacctcgccatcgc 389
            ||||| ||||||||||||||||||
Sbjct: 2527 ccttctcgacgacctcgccatcgc 2504

>ref|XM_820502.1| Trypanosoma brucei TREU927 clone RPCI93-26N11 multidrug resistance
            protein A (Tb927.8.2160) partial mRNA
          Length = 4746

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  tgaagctcgtgtgcaggagg 447
            ||||||||||||||||||||
Sbjct: 4344 tgaagctcgtgtgcaggagg 4363

>emb|CT009669.5| Zebrafish DNA sequence from clone CH73-31I8 in linkage group 22,
             complete sequence
          Length = 91024

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   ggcaacggccactgctcccc 363
             ||||||||||||||||||||
Sbjct: 54607 ggcaacggccactgctcccc 54588

>emb|AJ318885.1|TBR318885 Trypanosoma brucei brucei mRNA for multidrug resistance protein A
            (MRPA gene)
          Length = 4746

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  tgaagctcgtgtgcaggagg 447
            ||||||||||||||||||||
Sbjct: 4344 tgaagctcgtgtgcaggagg 4363

>dbj|AK145264.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN
           full-length enriched library, clone:G930030G13
           product:hypothetical C2 domain/C2 calcium/lipid-binding
           domain, CaLB containing protein, full insert sequence
          Length = 3116

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 atccagcctcagagcctcca 292
           ||||||||||||||||||||
Sbjct: 453 atccagcctcagagcctcca 434

>dbj|AK166434.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN
           full-length enriched library, clone:G930018K11
           product:hypothetical protein, full insert sequence
          Length = 1094

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 atccagcctcagagcctcca 292
           ||||||||||||||||||||
Sbjct: 436 atccagcctcagagcctcca 417

>gb|U89026.1|TBU89026 Trypanosoma brucei brucei putative ABC transporter 1 (Tbabc1) gene,
           partial cds
          Length = 399

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 428 tgaagctcgtgtgcaggagg 447
           ||||||||||||||||||||
Sbjct: 270 tgaagctcgtgtgcaggagg 289

>gb|AC158996.2| Mus musculus BAC clone RP24-137I10 from chromosome 9, complete sequence
          Length = 154654

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   atccagcctcagagcctcca 292
             ||||||||||||||||||||
Sbjct: 40399 atccagcctcagagcctcca 40380

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 325     gctgaccgccgaagcgacgg 344
               ||||||||||||||||||||
Sbjct: 3605296 gctgaccgccgaagcgacgg 3605315

>emb|BX649245.16| Zebrafish DNA sequence from clone CH211-213C4 in linkage group 22,
              complete sequence
          Length = 201091

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    ggcaacggccactgctcccc 363
              ||||||||||||||||||||
Sbjct: 125818 ggcaacggccactgctcccc 125837


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,813,682
Number of Sequences: 3902068
Number of extensions: 2813682
Number of successful extensions: 51836
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51701
Number of HSP's gapped (non-prelim): 133
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)