ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25b02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 224 bits (113), Expect = 3e-55 Identities = 177/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 863792 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 863851 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 863852 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggagggtc 863911 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| ||||||| |||||||||||||||||| Sbjct: 863912 caccacagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactacagcccg 863971 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 863972 ggcctggcgcaccccaa 863988
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 224 bits (113), Expect = 3e-55 Identities = 177/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 863792 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 863851 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 863852 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggagggtc 863911 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| ||||||| |||||||||||||||||| Sbjct: 863912 caccacagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactacagcccg 863971 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 863972 ggcctggcgcaccccaa 863988
>emb|BX000500.4|CNS08CDQ Oryza sativa chromosome 12, . BAC OSJNBb0027B07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79383 Score = 224 bits (113), Expect = 3e-55 Identities = 177/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4132 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 4073 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 4072 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggagggtc 4013 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| ||||||| |||||||||||||||||| Sbjct: 4012 caccacagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactacagcccg 3953 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 3952 ggcctggcgcaccccaa 3936
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 224 bits (113), Expect = 3e-55 Identities = 177/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1377 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 1436 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 1437 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggagggtc 1496 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| ||||||| |||||||||||||||||| Sbjct: 1497 caccacagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactacagcccg 1556 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 1557 ggcctggcgcaccccaa 1573
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 222 bits (112), Expect = 1e-54 Identities = 139/148 (93%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 27847638 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 27847697 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27847698 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttgtgggggagggtc 27847757 Query: 121 catcacaatggcttgccattgggtccct 148 || |||| |||||||||| |||| |||| Sbjct: 27847758 caccacagtggcttgccactggggccct 27847785 Score = 216 bits (109), Expect = 6e-53 Identities = 176/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 24190257 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 24190198 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 24190197 tctgatatgtgggccatgtgttcacttcgatattaaatttattttttgtgggggagggtc 24190138 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| ||||||| ||||||||||||| |||| Sbjct: 24190137 caccacagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactaccgcccg 24190078 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 24190077 ggcctggcgcaccccaa 24190061 Score = 210 bits (106), Expect = 4e-51 Identities = 160/178 (89%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 29059254 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 29059313 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 29059314 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttatgggggagggtc 29059373 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || || | |||||||||| |||| |||| ||||||| ||||||||||| ||||| Sbjct: 29059374 caccatagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactgcagcc 29059431 Score = 210 bits (106), Expect = 4e-51 Identities = 160/178 (89%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 25270685 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 25270626 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| | Sbjct: 25270625 tctgatatgtggaccatgtgcccactttgatattaaatttattttttatgggggagggct 25270566 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || | | |||||||||| | ||||||| | | |||| || ||||||||||||||||| Sbjct: 25270565 cacaatagtggcttgccactaggtccctcaagcgtcgtttaggcgttgcactacagcc 25270508 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 25221736 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 25221795 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttt 105 ||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 25221796 tctgatatgtgtaccatgtgttcactttgatattaaatttatttt 25221840 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||| ||||||||||| || || |||| |||||||| | |||| || Sbjct: 18794596 atacctttctcggccttt-ggctaagatcaagtataatatcggttcttattattttatta 18794654 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttt 105 ||||||| ||||| |||| ||| || | ||||||||||||||||| Sbjct: 18794655 tctgatacgtgggtcatgagcctacgatgatattaaatttatttt 18794699 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 56 taatatctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtggggga 115 ||||||||||| |||||||||| ||| ||| |||||||||||||||| ||||||||||| Sbjct: 24117964 taatatctgatgtgtgggccatatgctcacttcgatattaaatttattatttgtggggga 24117905 Query: 116 ggg 118 ||| Sbjct: 24117904 ggg 24117902 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 88 cgatattaaatttattttttgtgggggagggatcatcacaatggc 132 |||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 24117898 cgatattaaatttattatttgtgggggagggctcatcacagtggc 24117854
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 222 bits (112), Expect = 1e-54 Identities = 139/148 (93%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5232365 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 5232306 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5232305 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttgtgggggagggcc 5232246 Query: 121 catcacaatggcttgccattgggtccct 148 |||||| |||||||||| |||| |||| Sbjct: 5232245 tatcacagtggcttgccactggggccct 5232218 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3233932 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 3233873 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 3233872 tctgatatgtgggccatgtgtccacttcgatattaaatttattttttgtgggggagggtc 3233813 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || |||| |||||||||| | || |||| ||||||| ||||||||||||||||| Sbjct: 3233812 caccacagtggcttgccacttgggccctcgcgtgtcgcccaggcgttgcactacagcc 3233755 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3196190 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 3196249 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3196250 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttgtgggggagggcc 3196309 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || ||| |||||||||| |||| ||| ||||||| ||||||||||||||||| Sbjct: 3196310 cactacagtggcttgccactggggtcctcgcgtgtcgcccaggcgttgcactacagcc 3196367 Score = 200 bits (101), Expect = 4e-48 Identities = 174/197 (88%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 34778691 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 34778632 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 34778631 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggagggcc 34778572 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || ||| |||||||||| |||| |||| | | ||||| ||||||||||| | |||| Sbjct: 34778571 cactacagtggcttgccactggggccctcatgcgtcgcccaggcgttgcactgctgcccg 34778512 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 34778511 ggcctggcgcaccccaa 34778495 Score = 198 bits (100), Expect = 1e-47 Identities = 136/148 (91%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5250028 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 5250087 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| Sbjct: 5250088 tctgatatgtgggccatgtgcccacttcgatgttaaatttattttttgtgagggagggcc 5250147 Query: 121 catcacaatggcttgccattgggtccct 148 || |||| ||||| |||| |||| |||| Sbjct: 5250148 caccacagtggctagccactggggccct 5250175 Score = 194 bits (98), Expect = 2e-46 Identities = 113/118 (95%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 34764080 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 34764021 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 34764020 tctgatatatgggctatgtgcccacttcgatattaaatttattttttgtgggggaggg 34763963 Score = 192 bits (97), Expect = 9e-46 Identities = 173/197 (87%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 34580218 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 34580277 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| | Sbjct: 34580278 tctgatacgtgggccatgtgtccactttgatattaaatttattttttgtgggggagagcc 34580337 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| | | ||||| ||||||||||| | |||| Sbjct: 34580338 caccacagtggcttgccactggggccctcacgcgtcgcccaggcgttgcactgctgcccg 34580397 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 34580398 ggcctggcgcaccccaa 34580414 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 26598314 atacctttctcggcctttttgctaagatcaagtgtagtatctgttcttatcagtttaata 26598255 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 26598254 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggaggg 26598197 Score = 172 bits (87), Expect = 8e-40 Identities = 108/115 (93%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 26601026 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 26600967 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtggggga 115 |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 26600966 tctgatatgtgggctatgtgttcactttgatattaaatttattttttgtggggga 26600912 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 64 gatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 20674919 gatatgtgggccatgtgcccacttcgatattaaatttatttttt 20674962 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 52 agtttaatatctgatatgtgggccatgt 79 ||||||||||| |||||||||||||||| Sbjct: 5237879 agtttaatatcggatatgtgggccatgt 5237852 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gatattaaatttattttttgtggg 112 ||||||||||||||||||| |||| Sbjct: 19740748 gatattaaatttattttttttggg 19740725
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 222 bits (112), Expect = 1e-54 Identities = 139/148 (93%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10996 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 11055 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 11056 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttgtgggggagggtc 11115 Query: 121 catcacaatggcttgccattgggtccct 148 || |||| |||||||||| |||| |||| Sbjct: 11116 caccacagtggcttgccactggggccct 11143
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 222 bits (112), Expect = 1e-54 Identities = 139/148 (93%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 140017 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 140076 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 140077 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttgtgggggagggtc 140136 Query: 121 catcacaatggcttgccattgggtccct 148 || |||| |||||||||| |||| |||| Sbjct: 140137 caccacagtggcttgccactggggccct 140164
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 222 bits (112), Expect = 1e-54 Identities = 139/148 (93%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 125818 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 125759 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 125758 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttgtgggggagggcc 125699 Query: 121 catcacaatggcttgccattgggtccct 148 |||||| |||||||||| |||| |||| Sbjct: 125698 tatcacagtggcttgccactggggccct 125671 Score = 198 bits (100), Expect = 1e-47 Identities = 136/148 (91%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 143481 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 143540 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||| Sbjct: 143541 tctgatatgtgggccatgtgcccacttcgatgttaaatttattttttgtgagggagggcc 143600 Query: 121 catcacaatggcttgccattgggtccct 148 || |||| ||||| |||| |||| |||| Sbjct: 143601 caccacagtggctagccactggggccct 143628 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 52 agtttaatatctgatatgtgggccatgt 79 ||||||||||| |||||||||||||||| Sbjct: 131332 agtttaatatcggatatgtgggccatgt 131305
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 220 bits (111), Expect = 4e-54 Identities = 163/179 (91%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104313 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 104372 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 104373 tctgatatgtgggccacgtgcccacttcgatattaaatttattttttgtgggggagggtc 104432 Query: 121 catcacaatggcttgccattggg-tcccttaggtgtcgcttgggcgttgcactacagcc 178 || ||| |||||||||| |||| |||||| ||||||| ||||||||||||||||| Sbjct: 104433 cactacagtggcttgccactgggatcccttgcgtgtcgcccaggcgttgcactacagcc 104491
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 220 bits (111), Expect = 4e-54 Identities = 163/179 (91%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 826020 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 826079 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 826080 tctgatatgtgggccacgtgcccacttcgatattaaatttattttttgtgggggagggtc 826139 Query: 121 catcacaatggcttgccattggg-tcccttaggtgtcgcttgggcgttgcactacagcc 178 || ||| |||||||||| |||| |||||| ||||||| ||||||||||||||||| Sbjct: 826140 cactacagtggcttgccactgggatcccttgcgtgtcgcccaggcgttgcactacagcc 826198
>emb|X69327.1|TAU2B T.aestivum (clone pTAU2.3) U2 snRNA Length = 196 Score = 220 bits (111), Expect = 4e-54 Identities = 174/195 (89%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttatgggggagggcc 120 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| | |||||| |||| ||||| ||||||| ||||||||||| | ||| Sbjct: 121 caccacagtagcttgctgctggggcccttgcgtgtcgcccaggcgttgcactgctgcctg 180 Query: 181 ggcaggcgcacccca 195 ||| ||||||||||| Sbjct: 181 ggccggcgcacccca 195
>dbj|AK067579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113F10, full insert sequence Length = 1405 Score = 220 bits (111), Expect = 4e-54 Identities = 163/179 (91%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 64 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 65 tctgatatgtgggccacgtgcccacttcgatattaaatttattttttgtgggggagggtc 124 Query: 121 catcacaatggcttgccattggg-tcccttaggtgtcgcttgggcgttgcactacagcc 178 || ||| |||||||||| |||| |||||| ||||||| ||||||||||||||||| Sbjct: 125 cactacagtggcttgccactgggatcccttgcgtgtcgcccaggcgttgcactacagcc 183
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 220 bits (111), Expect = 4e-54 Identities = 163/179 (91%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 826022 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 826081 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 826082 tctgatatgtgggccacgtgcccacttcgatattaaatttattttttgtgggggagggtc 826141 Query: 121 catcacaatggcttgccattggg-tcccttaggtgtcgcttgggcgttgcactacagcc 178 || ||| |||||||||| |||| |||||| ||||||| ||||||||||||||||| Sbjct: 826142 cactacagtggcttgccactgggatcccttgcgtgtcgcccaggcgttgcactacagcc 826200
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 124344 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 124403 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 124404 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttgtgggggagggcc 124463 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || ||| |||||||||| |||| ||| ||||||| ||||||||||||||||| Sbjct: 124464 cactacagtggcttgccactggggtcctcgcgtgtcgcccaggcgttgcactacagcc 124521
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106119 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 106060 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 106059 tctgatatgtgggccatgtgtccacttcgatattaaatttattttttgtgggggagggtc 106000 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || |||| |||||||||| | || |||| ||||||| ||||||||||||||||| Sbjct: 105999 caccacagtggcttgccacttgggccctcgcgtgtcgcccaggcgttgcactacagcc 105942 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 68377 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 68436 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 68437 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttgtgggggagggcc 68496 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || ||| |||||||||| |||| ||| ||||||| ||||||||||||||||| Sbjct: 68497 cactacagtggcttgccactggggtcctcgcgtgtcgcccaggcgttgcactacagcc 68554
>emb|X69326.1|TAU2A T.aestivum (clone pTAU2.2) U2 snRNA Length = 194 Score = 218 bits (110), Expect = 2e-53 Identities = 159/174 (91%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 61 tctgatatgtgggccatgtgtccacaacgatattaaatttattttttgt-ggggagggtc 119 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactac 174 || |||| |||||||||| |||| |||| | |||| | ||| ||||||||||| Sbjct: 120 caccacagtggcttgccactggggccctcacgtgttccctggacgttgcactac 173
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 216 bits (109), Expect = 6e-53 Identities = 176/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1808 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 1749 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 1748 tctgatatgtgggccatgtgttcacttcgatattaaatttattttttgtgggggagggtc 1689 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| ||||||| ||||||||||||| |||| Sbjct: 1688 caccacagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactaccgcccg 1629 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 1628 ggcctggcgcaccccaa 1612
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 216 bits (109), Expect = 6e-53 Identities = 176/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123672 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 123613 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 123612 tctgatatgtgggccatgtgttcacttcgatattaaatttattttttgtgggggagggtc 123553 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| ||||||| ||||||||||||| |||| Sbjct: 123552 caccacagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactaccgcccg 123493 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 123492 ggcctggcgcaccccaa 123476 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 56 taatatctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtggggga 115 ||||||||||| |||||||||| ||| ||| |||||||||||||||| ||||||||||| Sbjct: 51379 taatatctgatgtgtgggccatatgctcacttcgatattaaatttattatttgtggggga 51320 Query: 116 ggg 118 ||| Sbjct: 51319 ggg 51317 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 88 cgatattaaatttattttttgtgggggagggatcatcacaatggc 132 |||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 51313 cgatattaaatttattatttgtgggggagggctcatcacagtggc 51269
>dbj|AK107214.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C06, full insert sequence Length = 1411 Score = 216 bits (109), Expect = 6e-53 Identities = 176/197 (89%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 61 tctgatatgtgggccatgtgttcacttcgatattaaatttattttttgtgggggagggtc 120 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| ||||||| ||||||||||||| |||| Sbjct: 121 caccacagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactaccgcccg 180 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 181 ggcctggcgcaccccaa 197
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 210 bits (106), Expect = 4e-51 Identities = 160/178 (89%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 176791 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 176850 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 176851 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttatgggggagggtc 176910 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || || | |||||||||| |||| |||| ||||||| ||||||||||| ||||| Sbjct: 176911 caccatagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactgcagcc 176968
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 210 bits (106), Expect = 4e-51 Identities = 160/178 (89%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 87356 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 87297 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| | Sbjct: 87296 tctgatatgtggaccatgtgcccactttgatattaaatttattttttatgggggagggct 87237 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || | | |||||||||| | ||||||| | | |||| || ||||||||||||||||| Sbjct: 87236 cacaatagtggcttgccactaggtccctcaagcgtcgtttaggcgttgcactacagcc 87179 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 38407 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 38466 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttt 105 ||||||||||| ||||||| ||| ||||||||||||||||| Sbjct: 38467 tctgatatgtgtaccatgtgttcactttgatattaaatttatttt 38511
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 210 bits (106), Expect = 4e-51 Identities = 160/178 (89%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7211 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 7270 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 7271 tctgatatgtgggccatgtgcccacttcgatattaaatttattttttatgggggagggtc 7330 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || || | |||||||||| |||| |||| ||||||| ||||||||||| ||||| Sbjct: 7331 caccatagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactgcagcc 7388
>gb|S72337.1| (wU2.1)=U2 snRNA [Triticum aestivum=wheat, snRNA, 194 nt] Length = 194 Score = 208 bits (105), Expect = 2e-50 Identities = 111/113 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggg 113 |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 61 tctgatatgtgggccatgtgtccacaacgatattaaatttattttttgtgggg 113
>emb|X69330.1|TAU2E T.aestivum (clone pTAU2.1) U2 snRNA Length = 194 Score = 208 bits (105), Expect = 2e-50 Identities = 111/113 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggg 113 |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 61 tctgatatgtgggccatgtgtccacaacgatattaaatttattttttgtgggg 113
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 206 bits (104), Expect = 6e-50 Identities = 174/196 (88%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 750257 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 750316 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 750317 tctgatatgt-ggccatgtgcccactttgatattaaatttattttttgtgggggagggtc 750375 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || || | ||||||| | ||||||||||||||||| Sbjct: 750376 caccatagtggcttgccactagggccttcgtgtgtcgcctaggcgttgcactacagcctt 750435 Query: 181 ggcaggcgcaccccaa 196 ||| |||||||||||| Sbjct: 750436 ggctggcgcaccccaa 750451 Score = 198 bits (100), Expect = 1e-47 Identities = 172/196 (87%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 747188 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 747247 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct: 747248 tctgatacgtgggtcttgtgcccactttgatattaaatttattttttgtgggggagggtc 747307 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || |||| |||| || | | |||||||||| ||||| Sbjct: 747308 caccatagtggcttgccactagggccctcgtgtgttgcctagacgttgcactatagccct 747367 Query: 181 ggcaggcgcaccccaa 196 |||||||||||||||| Sbjct: 747368 ggcaggcgcaccccaa 747383 Score = 196 bits (99), Expect = 6e-47 Identities = 171/195 (87%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 751871 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 751930 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| | || |||||||||||||||||| ||||||||| | Sbjct: 751931 tctgatatgtgggccatgtgtctactttgatattaaatttatttttcgtgggggagagtc 751990 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || |||| | ||||||| | ||||||||||||||||| Sbjct: 751991 caccatagtggcttgccactagggccctcatgtgtcgcctaggcgttgcactacagcctt 752050 Query: 181 ggcaggcgcacccca 195 ||| || |||||||| Sbjct: 752051 ggctggtgcacccca 752065 Score = 168 bits (85), Expect = 1e-38 Identities = 106/113 (93%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 664989 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 664930 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggg 113 |||||||||||||||||||| | || |||||||||||||||||| |||||| Sbjct: 664929 tctgatatgtgggccatgtgtctactttgatattaaatttatttttcgtgggg 664877 Score = 125 bits (63), Expect = 2e-25 Identities = 105/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| Sbjct: 14419739 atacctttctcggccttttgactaagatcaagtgtagtatctgttcttattagtttaata 14419798 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 | ||||| |||||||||||| |||| ||||||||||| | ||||||| ||||||| Sbjct: 14419799 tatgatacgtgggccatgtgtccac--ggatattaaattagtattttgtgagggaggg 14419854
>gb|AF106847.1|AF106847 Oryza sativa U2 small nuclear RNA gene, complete sequence Length = 389 Score = 206 bits (104), Expect = 6e-50 Identities = 138/148 (93%), Gaps = 1/148 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 185 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 244 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| Sbjct: 245 tctgatatgtgggccatgtgctcactacgatattaaatttattttttgt-ggggagggtc 303 Query: 121 catcacaatggcttgccattgggtccct 148 || |||| |||||||||| |||| |||| Sbjct: 304 caccacagtggcttgccactggggccct 331
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 206 bits (104), Expect = 6e-50 Identities = 174/196 (88%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 49477 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 49536 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 49537 tctgatatgt-ggccatgtgcccactttgatattaaatttattttttgtgggggagggtc 49595 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || || | ||||||| | ||||||||||||||||| Sbjct: 49596 caccatagtggcttgccactagggccttcgtgtgtcgcctaggcgttgcactacagcctt 49655 Query: 181 ggcaggcgcaccccaa 196 ||| |||||||||||| Sbjct: 49656 ggctggcgcaccccaa 49671 Score = 198 bits (100), Expect = 1e-47 Identities = 172/196 (87%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 46408 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 46467 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct: 46468 tctgatacgtgggtcttgtgcccactttgatattaaatttattttttgtgggggagggtc 46527 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || |||| |||| || | | |||||||||| ||||| Sbjct: 46528 caccatagtggcttgccactagggccctcgtgtgttgcctagacgttgcactatagccct 46587 Query: 181 ggcaggcgcaccccaa 196 |||||||||||||||| Sbjct: 46588 ggcaggcgcaccccaa 46603 Score = 196 bits (99), Expect = 6e-47 Identities = 171/195 (87%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 51091 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 51150 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| | || |||||||||||||||||| ||||||||| | Sbjct: 51151 tctgatatgtgggccatgtgtctactttgatattaaatttatttttcgtgggggagagtc 51210 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || |||| | ||||||| | ||||||||||||||||| Sbjct: 51211 caccatagtggcttgccactagggccctcatgtgtcgcctaggcgttgcactacagcctt 51270 Query: 181 ggcaggcgcacccca 195 ||| || |||||||| Sbjct: 51271 ggctggtgcacccca 51285
>dbj|AK121312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112O04, full insert sequence Length = 3096 Score = 202 bits (102), Expect = 9e-49 Identities = 159/178 (89%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 537 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 596 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 || |||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 597 tccgatatgtgggccatgtgcccacttcgatattaaatttattttttatgggggagggtc 656 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagcc 178 || || | |||||||||| |||| |||| ||||||| ||||||||||| ||||| Sbjct: 657 caccatagtggcttgccactggggccctcgcgtgtcgcccaggcgttgcactgcagcc 714
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 200 bits (101), Expect = 4e-48 Identities = 174/197 (88%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 96539 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 96480 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 96479 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggagggcc 96420 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || ||| |||||||||| |||| |||| | | ||||| ||||||||||| | |||| Sbjct: 96419 cactacagtggcttgccactggggccctcatgcgtcgcccaggcgttgcactgctgcccg 96360 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 96359 ggcctggcgcaccccaa 96343 Score = 194 bits (98), Expect = 2e-46 Identities = 113/118 (95%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 81928 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 81869 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 81868 tctgatatatgggctatgtgcccacttcgatattaaatttattttttgtgggggaggg 81811
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 200 bits (101), Expect = 4e-48 Identities = 174/197 (88%), Gaps = 1/197 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 286 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 227 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 226 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggagggcc 167 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || ||| |||||||||| |||| |||| | | ||||| ||||||||||| | |||| Sbjct: 166 cactacagtggcttgccactggggccctcatgcgtcgcccaggcgttgcactgctgcccg 107 Query: 181 ggca-ggcgcaccccaa 196 ||| |||||||||||| Sbjct: 106 ggcctggcgcaccccaa 90
>emb|X16459.1|ZMU2SNRN Zea mays gene for U2 small nuclear RNA (U2snRNA) Length = 694 Score = 200 bits (101), Expect = 4e-48 Identities = 156/173 (90%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 280 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 339 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| |||| |||||||||||| ||||||||||||| | || Sbjct: 340 tctgatatgtgggccatgtgtccacttcgatattaaattaattttttgtggggaaaggtc 399 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcacta 173 || ||| ||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 400 cactacagtggcttg-cattgggtcccttatgtgtcgctctagcgttgcacta 451
>gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, complete sequence Length = 147470 Score = 200 bits (101), Expect = 4e-48 Identities = 155/173 (89%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 115175 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 115116 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| | Sbjct: 115115 tctgatatgtggaccatgtgttcactttgatattaaatttattttttgtgggggagggct 115056 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcacta 173 || ||| | |||||| | |||| ||| | |||||||||||||||||||||| Sbjct: 115055 cactacagtagcttgctactggggtcctcacgtgtcgcttgggcgttgcacta 115003 Score = 200 bits (101), Expect = 4e-48 Identities = 155/173 (89%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104852 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 104793 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| | Sbjct: 104792 tctgatatgtggaccatgtgttcactttgatattaaatttattttttgtgggggagggct 104733 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcacta 173 || ||| | |||||| | |||| ||| | |||||||||||||||||||||| Sbjct: 104732 cactacagtagcttgctactggggtcctcacgtgtcgcttgggcgttgcacta 104680 Score = 178 bits (90), Expect = 1e-41 Identities = 111/118 (94%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 145421 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagttgaata 145362 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 145361 tctgatatgtggaccatgtgttcacttcgatattaaatttattttttgtgggggaggg 145304 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatc 51 |||||||||||||||||||| ||||||| | ||||| ||||| |||||||| Sbjct: 95380 atacctttctcggccttttgactaagattaagtgtattatctattcttatc 95330 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatc 51 ||||||||||||||||||| ||||||| | ||||| ||||| |||||||| Sbjct: 143121 atacctttctcggccttttaactaagattaagtgtattatctattcttatc 143071 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatc 51 ||||||||||||||||||| ||||||| | ||||| ||||| |||||||| Sbjct: 112751 atacctttctcggccttttaactaagattaagtgtattatctattcttatc 112701 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 140 tgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 ||||| ||||| |||||| |||||| ||||||||||||||| Sbjct: 114952 tgggttccttaagtgtcggttgggccttgcactacagccca 114912 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 140 tgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 ||||| ||||| |||||| |||||| ||||||||||||||| Sbjct: 104629 tgggttccttaagtgtcggttgggccttgcactacagccca 104589
>gb|AF106845.1|AF106845 Oryza sativa U2 small nuclear RNA genes, complete sequence Length = 2387 Score = 196 bits (99), Expect = 6e-47 Identities = 171/195 (87%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1870 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 1929 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| | || |||||||||||||||||| ||||||||| | Sbjct: 1930 tctgatatgtgggccatgtgtctactttgatattaaatttatttttcgtgggggagagtc 1989 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || |||| | ||||||| | ||||||||||||||||| Sbjct: 1990 caccatagtggcttgccactagggccctcatgtgtcgcctaggcgttgcactacagcctt 2049 Query: 181 ggcaggcgcacccca 195 ||| || |||||||| Sbjct: 2050 ggctggtgcacccca 2064 Score = 190 bits (96), Expect = 4e-45 Identities = 172/196 (87%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 257 atacctttctcggccttttggctaagatcaagtgtgatatctgttcttatcagtttaata 316 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 317 tctgatatgt-ggccatgtgcccactttgatattaaatttattttttgtgggggagggtc 375 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || || | ||||||| | ||||||||||||||||| Sbjct: 376 caccatagtggcttgccactagggccttcgtgtgtcgcctaggcgttgcactacagcctt 435 Query: 181 ggcaggcgcaccccaa 196 ||| |||||||||||| Sbjct: 436 ggctggcgcaccccaa 451
>gb|U27085.1|OSU27085 Oryza sativa U2 small nuclear RNA (U2snRNA) gene, complete sequence Length = 623 Score = 196 bits (99), Expect = 6e-47 Identities = 171/195 (87%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 171 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||||||| | || |||||||||||||||||| ||||||||| | Sbjct: 172 tctgatatgtgggccatgtgtctactttgatattaaatttatttttcgtgggggagagtc 231 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || || | |||||||||| | || |||| | ||||||| | ||||||||||||||||| Sbjct: 232 caccatagtggcttgccactagggccctcatgtgtcgcctaggcgttgcactacagcctt 291 Query: 181 ggcaggcgcacccca 195 ||| || |||||||| Sbjct: 292 ggctggtgcacccca 306
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 194 bits (98), Expect = 2e-46 Identities = 113/118 (95%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 277259 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 277318 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 277319 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggaggg 277376 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 274521 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtataata 274580 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtggggga 115 |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 274581 tctgatatgtgggctatgtgttcactttgatattaaatttattttttgtggggga 274635
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 192 bits (97), Expect = 9e-46 Identities = 173/197 (87%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 91158 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 91217 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| | Sbjct: 91218 tctgatacgtgggccatgtgtccactttgatattaaatttattttttgtgggggagagcc 91277 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| | | ||||| ||||||||||| | |||| Sbjct: 91278 caccacagtggcttgccactggggccctcacgcgtcgcccaggcgttgcactgctgcccg 91337 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 91338 ggcctggcgcaccccaa 91354
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 192 bits (97), Expect = 9e-46 Identities = 173/197 (87%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 46833 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 46892 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| | Sbjct: 46893 tctgatacgtgggccatgtgtccactttgatattaaatttattttttgtgggggagagcc 46952 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcactacagccca 180 || |||| |||||||||| |||| |||| | | ||||| ||||||||||| | |||| Sbjct: 46953 caccacagtggcttgccactggggccctcacgcgtcgcccaggcgttgcactgctgcccg 47012 Query: 181 gg-caggcgcaccccaa 196 || | |||||||||||| Sbjct: 47013 ggcctggcgcaccccaa 47029
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 140695 atacctttctcggcctttttgctaagatcaagtgtagtatctgttcttatcagtttaata 140636 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 140635 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggaggg 140578 Score = 172 bits (87), Expect = 8e-40 Identities = 108/115 (93%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 143407 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 143348 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtggggga 115 |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 143347 tctgatatgtgggctatgtgttcactttgatattaaatttattttttgtggggga 143293
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 32475 atacctttctcggcctttttgctaagatcaagtgtagtatctgttcttatcagtttaata 32416 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 32415 tctgatatgtgggccatgtgtccactttgatattaaatttattttttgtgggggaggg 32358 Score = 172 bits (87), Expect = 8e-40 Identities = 108/115 (93%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 35187 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 35128 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtggggga 115 |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 35127 tctgatatgtgggctatgtgttcactttgatattaaatttattttttgtggggga 35073
>dbj|D25323.1|PNIAATB Panicum miliaceum gene for mitochondrial aspartate aminotransferase, complete cds Length = 9014 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7242 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 7183 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||||| ||||||| || |||||||||||||||||||||||||| |||| Sbjct: 7182 tctgatatgtgggctatgtgcctacttcgatattaaatttattttttgtggggaaggg 7125
>gb|AC163004.1| Gap filling sequence from Zea mays clone ZMMBBb0382K21, from chromosome 8, complete sequence Length = 21864 Score = 178 bits (90), Expect = 1e-41 Identities = 111/118 (94%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 7951 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagttgaata 7892 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 7891 tctgatatgtggaccatgtgttcacttcgatattaaatttattttttgtgggggaggg 7834 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatc 51 ||||||||||||||||||| ||||||| | ||||| ||||| |||||||| Sbjct: 5651 atacctttctcggccttttaactaagattaagtgtattatctattcttatc 5601
>emb|X15930.1|PSSNU2B Pea U2 snRNA (clone pPSU2.2) Length = 195 Score = 176 bits (89), Expect = 5e-41 Identities = 153/173 (88%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 ||||||||||||||||| | |||| |||||||||||||||||| ||| |||| || | Sbjct: 61 tctgatatgtgggccattggtccac-acgatattaaatttatttcttgaggggaagagtc 119 Query: 121 catcacaatggcttgccattgggtcccttaggtgtcgcttgggcgttgcacta 173 || |||||| |||||| ||| |||| ||| ||||||||| ||||||||||| Sbjct: 120 caccacaatagcttgctattcggtctcttgtgtgtcgcttttgcgttgcacta 172
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 168 bits (85), Expect = 1e-38 Identities = 106/113 (93%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 92367 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 92308 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggg 113 |||||||||||||||||||| | || |||||||||||||||||| |||||| Sbjct: 92307 tctgatatgtgggccatgtgtctactttgatattaaatttatttttcgtgggg 92255
>emb|X15929.1|PSSNU2A Pea U2 snRNA (clone pPSU2.1) Length = 194 Score = 161 bits (81), Expect = 3e-36 Identities = 131/145 (90%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggat 120 |||||||||||||||| | |||| |||||||||||||||||| ||| ||||||| | | Sbjct: 61 tctgatatgtgggccaatggtccac-acgatattaaatttatttcttgagggggagag-t 118 Query: 121 catcacaatggcttgccattgggtc 145 || |||| | |||||| |||||||| Sbjct: 119 caccacagtagcttgctattgggtc 143
>gb|AC149482.1| Populus trichocarpa clone Pop1-69G3, complete sequence Length = 107795 Score = 159 bits (80), Expect = 1e-35 Identities = 108/116 (93%), Gaps = 1/116 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 90998 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 90939 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggag 116 ||||||| ||||||||| | |||| ||||||||||||| |||||||| ||||||| Sbjct: 90938 tctgatacgtgggccataggtccac-acgatattaaattaattttttgagggggag 90884
>gb|AC007576.3| Arabidopsis thaliana chromosome I BAC F7A19 genomic sequence, complete sequence Length = 112126 Score = 159 bits (80), Expect = 1e-35 Identities = 102/108 (94%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 85329 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 85388 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttg 108 ||||||||||||||||| |||||| |||||||||| | ||||||||| Sbjct: 85389 tctgatatgtgggccatcggcccac-acgatattaactctattttttg 85435
>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16 Length = 107271 Score = 159 bits (80), Expect = 1e-35 Identities = 102/108 (94%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 20416 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 20475 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttg 108 ||||||||||||||||| |||||| |||||||||| | ||||||||| Sbjct: 20476 tctgatatgtgggccatcggcccac-acgatattaactctattttttg 20522 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 57938 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 57879 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 57878 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 57833
>emb|X52312.1|ATU26 Arabidopsis thaliana U2.6 snRNA gene for U2 snRNA Length = 550 Score = 159 bits (80), Expect = 1e-35 Identities = 102/108 (94%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 235 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 294 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttg 108 ||||||||||||||||| |||||| |||||||||| | ||||||||| Sbjct: 295 tctgatatgtgggccatcggcccac-acgatattaactctattttttg 341
>gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromosome IV near 10 cM, complete sequence Length = 120185 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 58789 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 58848 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 58849 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 58894
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 44142 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 44201 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 44202 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 44247
>emb|AL049660.1|ATF15B8 Arabidopsis thaliana DNA chromosome 3, BAC clone F15B8 Length = 94378 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12431 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 12490 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 12491 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 12536 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 63308 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 63249 Query: 61 tctgatatgtgggccat 77 ||||||||||||||||| Sbjct: 63248 tctgatatgtgggccat 63232
>gb|AC006569.5| Arabidopsis thaliana chromosome 2 clone F11A3 map mi148, complete sequence Length = 93868 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9675 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 9616 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 9615 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 9570
>gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M13 map CIC11A04, complete sequence Length = 104016 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33098 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 33157 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 33158 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 33203 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30016 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 30075 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 30076 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 30121
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 42548 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 42489 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 42488 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 42443
>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete sequence Length = 93677 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 89245 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 89186 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 89185 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 89140
>dbj|AB016887.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCI2 Length = 15607 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3785 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 3726 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 3725 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 3680
>emb|X05084.1|VFU2RNA Broad bean (Vicia faba) U2 small nuclear RNA Length = 193 Score = 157 bits (79), Expect = 5e-35 Identities = 146/167 (87%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaatatctgat 65 Query: 67 atgtgggccatgtgcccacaacgatattaaatttattttttgtgggggagggatcatcac 126 |||||||||| |||||| |||||||||||||||||| ||| |||| || | || ||| Sbjct: 66 atgtgggccaatggcccac-acgatattaaatttatttcttgaggggaagaggccaccac 124 Query: 127 aatggcttgccattgggtcccttaggtgtcgcttgggcgttgcacta 173 | | |||||| |||||||| |||| |||||||| ||||||||||| Sbjct: 125 agtagcttgctattgggtctcttacgtgtcgctcttgcgttgcacta 171
>emb|X06478.1|ATU29 Arabidopsis thaliana U2 RNA gene (U2.9) Length = 359 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 200 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 259 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 260 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 305
>emb|X06477.1|ATU27 Arabidopsis thaliana U2 RNA gene (U2.7) Length = 842 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 503 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 562 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 563 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 608
>emb|X06476.1|ATU25 Arabidopsis thaliana U2 RNA gene (U2.5) Length = 748 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 456 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 515 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 516 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 561
>emb|X06475.1|ATU24 Arabidopsis thaliana U2 RNA gene (U2.4) Length = 884 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 589 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 648 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 649 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 694
>emb|X06474.1|ATU23 Arabidopsis thaliana U2 RNA gene (U2.3) Length = 867 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 512 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 571 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 572 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 617
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project) Length = 92491 Score = 157 bits (79), Expect = 5e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 73709 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 73650 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 73649 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 73604
>gb|AF106848.1|AF106848 Oryza sativa U2 small nuclear RNA pseudogene, complete sequence Length = 197 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 26 gatcatgtgtagtatctgttcttatcagtttaatatctgatatgtgggccatgtgcccac 85 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20 gatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggctatgtgcccat 79 Query: 86 aacgatattaaatttattttttgtgggggagggatcatcacaatggcttgccattggg 143 |||||||||||||||||||||||||||||| ||| |||| |||||||||| |||| Sbjct: 80 tgtgatattaaatttattttttgtgggggagggctcaccacagtggcttgccactggg 137
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 155 bits (78), Expect = 2e-34 Identities = 100/106 (94%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 67620 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 67561 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttt 106 ||||||||||||||||| |||||| |||||||||| | ||||||| Sbjct: 67560 tctgatatgtgggccatcggcccac-acgatattaactctattttt 67516
>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20 Length = 79676 Score = 151 bits (76), Expect = 3e-33 Identities = 92/96 (95%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28254 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 28195 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaa 96 ||||||||||||||||| |||||| |||||||||| Sbjct: 28194 tctgatatgtgggccatcggcccac-acgatattaa 28160
>gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09, complete sequence Length = 132099 Score = 149 bits (75), Expect = 1e-32 Identities = 100/107 (93%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 57928 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 57987 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||| ||| |||||| |||||||||| | |||||||| Sbjct: 57988 tctgatatgtgggtcatcggcccac-acgatattaactctatttttt 58033
>dbj|AB013390.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9I9 Length = 51860 Score = 149 bits (75), Expect = 1e-32 Identities = 100/107 (93%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 28824 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtataata 28883 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttttt 107 ||||||||||||||||| |||||| |||||||||| | |||||||| Sbjct: 28884 tctgatatgtgggccatcggcccac-acgatattaactctatttttt 28929
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 147 bits (74), Expect = 5e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12679568 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatg 12679509 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||||| ||||||| || ||||||||||| |||| || ||||| |||| Sbjct: 12679508 tctgatatgtgggctatgtgcctactttgatattaaattaatttattttggggaaggg 12679451 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 527 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgcc 586 ||||||| ||| ||| ||||| ||||||||||||||||||||||| ||| ||||||||| Sbjct: 15176116 tcgaggcctggcggccgatcgttgatgccgtgcacgccaagggcgcactcttcttctgcc 15176057 Query: 587 agatctgg 594 | |||||| Sbjct: 15176056 aaatctgg 15176049 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 303 tctcctgacgccgtacaagatgggccagctcgacct 338 ||||||||| || |||||||||||||||||| |||| Sbjct: 15177586 tctcctgacaccctacaagatgggccagctcaacct 15177551 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 555 cgtgcacgccaagggcgcgctcatcttctgccagat 590 |||||||||||||||||| || ||||||||||||| Sbjct: 15169717 cgtgcacgccaagggcgccgtcttcttctgccagat 15169682 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 23 taagatcatgtgtagtatctgttcttatcagtttaat 59 |||||| ||||| | ||||| |||||||||||||||| Sbjct: 18326961 taagatgatgtgcaatatcttttcttatcagtttaat 18326997
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 147 bits (74), Expect = 5e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 46597 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatg 46538 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 |||||||||||||| ||||||| || ||||||||||| |||| || ||||| |||| Sbjct: 46537 tctgatatgtgggctatgtgcctactttgatattaaattaatttattttggggaaggg 46480
>ref|NM_101543.2| Arabidopsis thaliana unknown protein AT1G16820 mRNA, complete cds Length = 1073 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 18 Query: 61 tctgatatgtgggccat 77 ||||||||||||||||| Sbjct: 17 tctgatatgtgggccat 1
>ref|NM_115637.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G57770 mRNA, complete cds Length = 1242 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 18 Query: 61 tctgatatgtgggccat 77 ||||||||||||||||| Sbjct: 17 tctgatatgtgggccat 1
>emb|X56321.1|STU222G S. tuberosum U2-22 gene for U2 snRNA Length = 680 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 284 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 343 Query: 61 tctgatatgtgggccat 77 ||||||||||||||||| Sbjct: 344 tctgatatgtgggccat 360
>emb|X56322.1|STU24G S. tuberosum U2-4 gene for U2 snRNA Length = 1177 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 513 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 572 Query: 61 tctgatatgtgggccat 77 ||||||||||||||||| Sbjct: 573 tctgatatgtgggccat 589
>emb|X06473.1|ATU22 Arabidopsis thaliana U2 RNA gene (U2.2) Length = 848 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 389 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 448 Query: 61 tctgatatgtgggccat 77 ||||||||||||||||| Sbjct: 449 tctgatatgtgggccat 465
>gb|M72889.1|POTSNRNAC Solanum tuberosum U2 small nuclear RNA, complete CDS Length = 196 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccat 77 ||||||||||||||||| Sbjct: 61 tctgatatgtgggccat 77
>gb|M72888.1|POTSNRNAB Solanum tuberosum U2 small nuclear RNA, complete CDS Length = 195 Score = 145 bits (73), Expect = 2e-31 Identities = 76/77 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccat 77 ||||||||||||||||| Sbjct: 61 tctgatatgtgggccat 77
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Minus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 5896759 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 5896700 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 5896699 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 5896640 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 5896639 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 5896580 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 5896579 caccgcaagggcgccctcttcatctgccagctctgg 5896544 Score = 127 bits (64), Expect = 4e-26 Identities = 178/216 (82%) Strand = Plus / Minus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 5891089 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 5891030 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||| ||| || ||||| |||| || Sbjct: 5891029 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 5890970 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 5890969 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 5890910 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 5890909 caccgcaagggcgccctcttcatctgccagctctgg 5890874 Score = 107 bits (54), Expect = 4e-20 Identities = 239/298 (80%), Gaps = 2/298 (0%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| | | |||| || |||| || | || || Sbjct: 5907043 atcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctc 5906984 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || |||||||| || | |||||||||||||||||||||| ||| ||||| | ||||| Sbjct: 5906983 gcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtac 5906924 Query: 418 tactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctccgac 477 ||| | ||||| ||||| ||| || | ||| |||| ||||||||||||||||||||| Sbjct: 5906923 tacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgac 5906864 Query: 478 acggcacagggataccgcgatacgccaggcgtgtggacggcag-agcacgtcgaggcatg 536 || || ||||| |||| || || || ||| | |||||| ||| |||| |||||||| || Sbjct: 5906863 accgcgcagggctacccggacacccccggcatctggacg-cagcagcaggtcgaggcgtg 5906805 Query: 537 gaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 594 ||||||||||||||| ||||| ||| ||||||||| ||| || |||||||| ||||| Sbjct: 5906804 gaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctgg 5906747 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 5930359 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 5930300 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 5930299 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 5930240 Query: 418 tactcccagcg 428 ||||| ||||| Sbjct: 5930239 tactcgcagcg 5930229 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| ||||| || || |||| ||| | || || Sbjct: 5925075 atcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtggtgctc 5925016 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || ||||| || || |||||||||||| ||||||||||||| ||||| || |||||| Sbjct: 5925015 gcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtac 5924956 Query: 418 tactcccagcgtgccac 434 ||||| ||||| ||||| Sbjct: 5924955 tactcgcagcgcgccac 5924939 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 521 agcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatct 580 |||| ||| |||| ||||| ||||||||||| ||||| ||| ||||||||||||| ||| Sbjct: 5916433 agcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcgcgctcttct 5916374 Query: 581 tctgccag 588 |||||||| Sbjct: 5916373 tctgccag 5916366 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 527 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttc 582 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| Sbjct: 5930130 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 5930075 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 535 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttc 582 ||||| ||||||||||| ||||| ||| ||||||||| ||| ||||| Sbjct: 5924838 tggaaacccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 5924791
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Minus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 18411 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 18352 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 18351 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 18292 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 18291 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 18232 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 18231 caccgcaagggcgccctcttcatctgccagctctgg 18196 Score = 127 bits (64), Expect = 4e-26 Identities = 178/216 (82%) Strand = Plus / Minus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 12741 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 12682 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||| ||| || ||||| |||| || Sbjct: 12681 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 12622 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 12621 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 12562 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 12561 caccgcaagggcgccctcttcatctgccagctctgg 12526 Score = 107 bits (54), Expect = 4e-20 Identities = 239/298 (80%), Gaps = 2/298 (0%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| | | |||| || |||| || | || || Sbjct: 28695 atcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctc 28636 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || |||||||| || | |||||||||||||||||||||| ||| ||||| | ||||| Sbjct: 28635 gcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtac 28576 Query: 418 tactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctccgac 477 ||| | ||||| ||||| ||| || | ||| |||| ||||||||||||||||||||| Sbjct: 28575 tacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgac 28516 Query: 478 acggcacagggataccgcgatacgccaggcgtgtggacggcag-agcacgtcgaggcatg 536 || || ||||| |||| || || || ||| | |||||| ||| |||| |||||||| || Sbjct: 28515 accgcgcagggctacccggacacccccggcatctggacg-cagcagcaggtcgaggcgtg 28457 Query: 537 gaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 594 ||||||||||||||| ||||| ||| ||||||||| ||| || |||||||| ||||| Sbjct: 28456 gaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctgg 28399 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 52011 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 51952 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 51951 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 51892 Query: 418 tactcccagcg 428 ||||| ||||| Sbjct: 51891 tactcgcagcg 51881 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| ||||| || || |||| ||| | || || Sbjct: 46727 atcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtggtgctc 46668 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || ||||| || || |||||||||||| ||||||||||||| ||||| || |||||| Sbjct: 46667 gcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtac 46608 Query: 418 tactcccagcgtgccac 434 ||||| ||||| ||||| Sbjct: 46607 tactcgcagcgcgccac 46591 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 521 agcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatct 580 |||| ||| |||| ||||| ||||||||||| ||||| ||| ||||||||||||| ||| Sbjct: 38085 agcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcgcgctcttct 38026 Query: 581 tctgccag 588 |||||||| Sbjct: 38025 tctgccag 38018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 527 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttc 582 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| Sbjct: 51782 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 51727 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 535 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttc 582 ||||| ||||||||||| ||||| ||| ||||||||| ||| ||||| Sbjct: 46490 tggaaacccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 46443
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Minus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 97534 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 97475 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 97474 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 97415 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 97414 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 97355 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 97354 caccgcaagggcgccctcttcatctgccagctctgg 97319 Score = 127 bits (64), Expect = 4e-26 Identities = 178/216 (82%) Strand = Plus / Minus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 91864 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 91805 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||| ||| || ||||| |||| || Sbjct: 91804 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 91745 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 91744 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 91685 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 91684 caccgcaagggcgccctcttcatctgccagctctgg 91649 Score = 107 bits (54), Expect = 4e-20 Identities = 239/298 (80%), Gaps = 2/298 (0%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| | | |||| || |||| || | || || Sbjct: 107818 atcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctc 107759 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || |||||||| || | |||||||||||||||||||||| ||| ||||| | ||||| Sbjct: 107758 gcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtac 107699 Query: 418 tactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctccgac 477 ||| | ||||| ||||| ||| || | ||| |||| ||||||||||||||||||||| Sbjct: 107698 tacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgac 107639 Query: 478 acggcacagggataccgcgatacgccaggcgtgtggacggcag-agcacgtcgaggcatg 536 || || ||||| |||| || || || ||| | |||||| ||| |||| |||||||| || Sbjct: 107638 accgcgcagggctacccggacacccccggcatctggacg-cagcagcaggtcgaggcgtg 107580 Query: 537 gaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 594 ||||||||||||||| ||||| ||| ||||||||| ||| || |||||||| ||||| Sbjct: 107579 gaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctgg 107522 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| ||||| || || |||| || | || || Sbjct: 131134 atcccgctgctgacgccgtacaagatggggcagctggagctctcccaccgtgtggtgctc 131075 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || |||||||| || |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 131074 gcgccgctcacgcggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtac 131015 Query: 418 tactcccagcg 428 ||||| ||||| Sbjct: 131014 tactcgcagcg 131004 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| ||||| || || |||| ||| | || || Sbjct: 125850 atcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtggtgctc 125791 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || ||||| || || |||||||||||| ||||||||||||| ||||| || |||||| Sbjct: 125790 gcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtac 125731 Query: 418 tactcccagcgtgccac 434 ||||| ||||| ||||| Sbjct: 125730 tactcgcagcgcgccac 125714 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 521 agcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatct 580 |||| ||| |||| ||||| ||||||||||| ||||| ||| ||||||||||||| ||| Sbjct: 117208 agcaggtcaaggcgtggaaacccatcgtcgacgccgtccaccgcaagggcgcgctcttct 117149 Query: 581 tctgccag 588 |||||||| Sbjct: 117148 tctgccag 117141 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 527 tcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttc 582 ||||||| ||||||||||||||||| ||||| ||| ||||||||| ||| ||||| Sbjct: 130905 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 130850 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 535 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttc 582 ||||| ||||||||||| ||||| ||| ||||||||| ||| ||||| Sbjct: 125613 tggaaacccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 125566
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctgg 415
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctgg 415
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 195 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 254 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 255 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 314 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 315 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 374 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 375 caccgcaagggcgccctcttcatctgccagctctgg 410
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 143 bits (72), Expect = 8e-31 Identities = 180/216 (83%) Strand = Plus / Plus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||||||| || ||||| |||| || Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| |||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 320 acacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 379 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 380 caccgcaagggcgccctcttcatctgccagctctgg 415
>ref|XM_464440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 180 Score = 137 bits (69), Expect = 5e-29 Identities = 72/73 (98%) Strand = Plus / Minus Query: 5 ctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctg 64 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 73 ctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctg 14 Query: 65 atatgtgggccat 77 ||||||||||||| Sbjct: 13 atatgtgggccat 1
>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project) Length = 86574 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 27022 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 26963 Query: 61 tctgatatgtgggccat 77 |||||||||||| |||| Sbjct: 26962 tctgatatgtggaccat 26946
>gb|M72890.1|POTSNRNAD Solanum tuberosum U2 small nuclear RNA, complete CDS Length = 196 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtgggccat 77 |||||||||||| |||| Sbjct: 61 tctgatatgtggaccat 77
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 135 bits (68), Expect = 2e-28 Identities = 71/72 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2159 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 2218 Query: 61 tctgatatgtgg 72 |||||||||||| Sbjct: 2219 tctgatatgtgg 2230 Score = 121 bits (61), Expect = 3e-24 Identities = 101/113 (89%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7815 atacttttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 7874 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggg 113 ||||||| |||| | ||||| ||| |||| |||| ||||||||||||||| Sbjct: 7875 tctgatacgtggactatgtgttcactttgata-taaacttattttttgtgggg 7926
>gb|AC149293.21| Medicago truncatula clone mth2-78c5, complete sequence Length = 111412 Score = 135 bits (68), Expect = 2e-28 Identities = 71/72 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 69084 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 69143 Query: 61 tctgatatgtgg 72 |||||||||||| Sbjct: 69144 tctgatatgtgg 69155 Score = 135 bits (68), Expect = 2e-28 Identities = 71/72 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 55011 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 55070 Query: 61 tctgatatgtgg 72 |||||||||||| Sbjct: 55071 tctgatatgtgg 55082 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/67 (86%), Gaps = 3/67 (4%) Strand = Plus / Minus Query: 6 tttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 ||||||||||| ||||||||||||| |||||| ||||| |||| |||||| ||||| | Sbjct: 71307 tttctcggcctcttggctaagatcaagtgtagcatctg---ttattagtttagtatctaa 71251 Query: 66 tatgtgg 72 ||||||| Sbjct: 71250 tatgtgg 71244
>gb|AC147780.10| Medicago truncatula clone mth2-36n9, complete sequence Length = 102831 Score = 135 bits (68), Expect = 2e-28 Identities = 71/72 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 32521 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 32580 Query: 61 tctgatatgtgg 72 |||||||||||| Sbjct: 32581 tctgatatgtgg 32592 Score = 135 bits (68), Expect = 2e-28 Identities = 71/72 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 18448 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 18507 Query: 61 tctgatatgtgg 72 |||||||||||| Sbjct: 18508 tctgatatgtgg 18519 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/67 (86%), Gaps = 3/67 (4%) Strand = Plus / Minus Query: 6 tttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 ||||||||||| ||||||||||||| |||||| ||||| |||| |||||| ||||| | Sbjct: 34744 tttctcggcctcttggctaagatcaagtgtagcatctg---ttattagtttagtatctaa 34688 Query: 66 tatgtgg 72 ||||||| Sbjct: 34687 tatgtgg 34681
>emb|X15936.1|PSGSNU2 Pea PSU2 gene for U2 snRNA Length = 528 Score = 135 bits (68), Expect = 2e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 256 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 315 Query: 61 tctgatatgtgggcca 76 ||||||||||| |||| Sbjct: 316 tctgatatgtgagcca 331
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 133 bits (67), Expect = 7e-28 Identities = 106/118 (89%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 13974 atacctttctcagccttttggctaagatcaagtgtagtatctgttattatcagtttaata 13915 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 ||||||||||||||||| | | || ||||||||||| || ||||||||||||||| Sbjct: 13914 tctgatatgtgggccatatttc--catggatattaaattaatattttgtgggggaggg 13859
>gb|AC147178.6| Medicago truncatula clone mth2-142i4, complete sequence Length = 114693 Score = 133 bits (67), Expect = 7e-28 Identities = 70/71 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 48006 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 48065 Query: 61 tctgatatgtg 71 ||||||||||| Sbjct: 48066 tctgatatgtg 48076
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 133 bits (67), Expect = 7e-28 Identities = 106/118 (89%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 18652696 atacctttctcagccttttggctaagatcaagtgtagtatctgttattatcagtttaata 18652637 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 ||||||||||||||||| | | || ||||||||||| || ||||||||||||||| Sbjct: 18652636 tctgatatgtgggccatatttc--catggatattaaattaatattttgtgggggaggg 18652581 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 agctagctagcagctgccgc 242 |||||||||||||||||||| Sbjct: 12851840 agctagctagcagctgccgc 12851821
>emb|X56323.1|STU211BG S. tuberosum U2-11B gene for U2 snRNA Length = 871 Score = 133 bits (67), Expect = 7e-28 Identities = 70/71 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 358 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 417 Query: 61 tctgatatgtg 71 ||||||||||| Sbjct: 418 tctgatatgtg 428
>emb|X55840.1|STU211G S. tuberosum U2-11 gene for U2 snRNA Length = 589 Score = 133 bits (67), Expect = 7e-28 Identities = 70/71 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 268 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 327 Query: 61 tctgatatgtg 71 ||||||||||| Sbjct: 328 tctgatatgtg 338
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 133 bits (67), Expect = 7e-28 Identities = 106/118 (89%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 18663549 atacctttctcagccttttggctaagatcaagtgtagtatctgttattatcagtttaata 18663490 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 ||||||||||||||||| | | || ||||||||||| || ||||||||||||||| Sbjct: 18663489 tctgatatgtgggccatatttc--catggatattaaattaatattttgtgggggaggg 18663434 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 agctagctagcagctgccgc 242 |||||||||||||||||||| Sbjct: 12859180 agctagctagcagctgccgc 12859161
>gb|M72891.1|POTSNRNAE Solanum tuberosum U2 small nuclear RNA, complete CDS Length = 196 Score = 133 bits (67), Expect = 7e-28 Identities = 70/71 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtg 71 ||||||||||| Sbjct: 61 tctgatatgtg 71 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 154 gtcgcttgggcgttgcactacagcccaggc 183 ||||| |||||||||||||||||||||||| Sbjct: 153 gtcgcctgggcgttgcactacagcccaggc 182
>gb|M72887.1|POTSNRNAA Solanum tuberosum U2 small nuclear RNA, complete CDS Length = 195 Score = 133 bits (67), Expect = 7e-28 Identities = 70/71 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 60 Query: 61 tctgatatgtg 71 ||||||||||| Sbjct: 61 tctgatatgtg 71
>ref|XM_467134.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 131 bits (66), Expect = 3e-27 Identities = 72/74 (97%) Strand = Plus / Minus Query: 4 cctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatct 63 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 74 cctttctcggcctttttgctaagatcaagtgtagtatctgttcttatcagtttaatatct 15 Query: 64 gatatgtgggccat 77 |||||||||||||| Sbjct: 14 gatatgtgggccat 1
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 129 bits (65), Expect = 1e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 6278 atacctttctcggccttttggctaagattaagtgtagtatctgttcttatcagtttaata 6337 Query: 61 tctgatatgtggg 73 ||||||||||||| Sbjct: 6338 tctgatatgtggg 6350
>gb|M72886.1|POTCARSEQ Solanum tuberosum Cara sequence Length = 195 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaata 60 Query: 61 tctgatatgtgggccat 77 | ||||||||||||||| Sbjct: 61 tttgatatgtgggccat 77
>gb|AC121236.18| Medicago truncatula clone mth2-12m19, complete sequence Length = 124839 Score = 127 bits (64), Expect = 4e-26 Identities = 70/72 (97%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 114458 atacctttctcggccttttggttaagatcaagtgtagtatctgttcttatcagtttaata 114517 Query: 61 tctgatatgtgg 72 |||||||||||| Sbjct: 114518 tctgatatgtgg 114529 Score = 123 bits (62), Expect = 7e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 109191 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 109250 Query: 61 tctgat 66 |||||| Sbjct: 109251 tctgat 109256 Score = 123 bits (62), Expect = 7e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 90426 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 90485 Query: 61 tctgat 66 |||||| Sbjct: 90486 tctgat 90491 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 105852 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaata 105911 Query: 61 tctgat 66 |||||| Sbjct: 105912 tctgat 105917 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61727 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 61786 Query: 61 tctgat 66 | |||| Sbjct: 61787 tttgat 61792 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 55717 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaata 55776 Query: 61 tctgat 66 |||||| Sbjct: 55777 tctgat 55782 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 103252 atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcaatttaata 103311 Query: 61 tctgatatgtgg 72 ||||| |||||| Sbjct: 103312 tctgagatgtgg 103323 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| Sbjct: 67098 atacctttctcggccttttggctaagatcaagtgtagtatttgttcttattagtttaata 67157 Query: 61 tctgat 66 | |||| Sbjct: 67158 tttgat 67163 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 6 tttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatat 61 ||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 112808 tttcttggccttttggctaagatcaagtgtagtatctgttcttatcaatttaatat 112863 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||| |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||| Sbjct: 70860 ataccattcttggccttttggcgaagatcaagtgtagtatttgttcttatcagtttaata 70919 Query: 61 tctgat 66 | |||| Sbjct: 70920 tttgat 70925 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 4 cctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatct 63 |||||||| | |||||||||||||||| ||||||||| ||||||||| |||| ||||||| Sbjct: 74556 cctttctcagtcttttggctaagatcaagtgtagtatatgttcttatgagttcaatatct 74615 Query: 64 gat 66 ||| Sbjct: 74616 gat 74618 Score = 69.9 bits (35), Expect = 9e-09 Identities = 61/69 (88%), Gaps = 3/69 (4%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatc---agttta 57 ||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 98898 ataccttattcgaccttttggctaagatcaaatgtagtatctgttcttatcagtagttta 98957 Query: 58 atatctgat 66 ||||||||| Sbjct: 98958 atatctgat 98966
>gb|AC151964.12| Medicago truncatula clone mth2-47g17, complete sequence Length = 117929 Score = 127 bits (64), Expect = 4e-26 Identities = 70/72 (97%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 77521 atacctttctcggccttttggttaagatcaagtgtagtatctgttcttatcagtttaata 77580 Query: 61 tctgatatgtgg 72 |||||||||||| Sbjct: 77581 tctgatatgtgg 77592 Score = 123 bits (62), Expect = 7e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 72254 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 72313 Query: 61 tctgat 66 |||||| Sbjct: 72314 tctgat 72319 Score = 123 bits (62), Expect = 7e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 53492 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 53551 Query: 61 tctgat 66 |||||| Sbjct: 53552 tctgat 53557 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 68915 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaata 68974 Query: 61 tctgat 66 |||||| Sbjct: 68975 tctgat 68980 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 24793 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 24852 Query: 61 tctgat 66 | |||| Sbjct: 24853 tttgat 24858 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 18783 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttattagtttaata 18842 Query: 61 tctgat 66 |||||| Sbjct: 18843 tctgat 18848 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 66315 atacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcaatttaata 66374 Query: 61 tctgatatgtgg 72 ||||| |||||| Sbjct: 66375 tctgagatgtgg 66386 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| Sbjct: 30164 atacctttctcggccttttggctaagatcaagtgtagtatttgttcttattagtttaata 30223 Query: 61 tctgat 66 | |||| Sbjct: 30224 tttgat 30229 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 6 tttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatat 61 ||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 75871 tttcttggccttttggctaagatcaagtgtagtatctgttcttatcaatttaatat 75926 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||| |||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||| Sbjct: 33926 ataccattcttggccttttggcgaagatcaagtgtagtatttgttcttatcagtttaata 33985 Query: 61 tctgat 66 | |||| Sbjct: 33986 tttgat 33991 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 4 cctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatct 63 |||||||| | |||||||||||||||| ||||||||| ||||||||| |||| ||||||| Sbjct: 37622 cctttctcagtcttttggctaagatcaagtgtagtatatgttcttatgagttcaatatct 37681 Query: 64 gat 66 ||| Sbjct: 37682 gat 37684 Score = 69.9 bits (35), Expect = 9e-09 Identities = 61/69 (88%), Gaps = 3/69 (4%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatc---agttta 57 ||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 61961 ataccttattcgaccttttggctaagatcaaatgtagtatctgttcttatcagtagttta 62020 Query: 58 atatctgat 66 ||||||||| Sbjct: 62021 atatctgat 62029
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 127 bits (64), Expect = 4e-26 Identities = 178/216 (82%) Strand = Plus / Plus Query: 379 tcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccactgcc 438 ||||||||||||||||||||||| ||||| || |||||||| | ||||| ||||| | Sbjct: 278 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 337 Query: 439 ggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgcgat 498 || || | |||||||| ||||||||||||||||||| ||| || ||||| |||| || Sbjct: 338 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 397 Query: 499 acgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgccgtg 558 || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 398 acacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtc 457 Query: 559 cacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| ||| || |||||||| ||||| Sbjct: 458 caccgcaagggcgccctcttcatctgccagctctgg 493
>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds Length = 1465 Score = 125 bits (63), Expect = 2e-25 Identities = 180/219 (82%) Strand = Plus / Plus Query: 376 cgctcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccact 435 |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 206 cgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcccagcgcgccacc 265 Query: 436 gccggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgc 495 ||||| |||||||| | |||||||| || || || | ||| || ||||| |||| Sbjct: 266 aggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcaggggtacccg 325 Query: 496 gatacgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgcc 555 || || || ||| | |||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 326 gagactcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtcgacgcc 385 Query: 556 gtgcacgccaagggcgcgctcatcttctgccagatctgg 594 || ||| ||||||||| || || |||||||||||||| Sbjct: 386 gtccaccgcaagggcgccatcttcgtctgccagatctgg 424
>dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049I01 Length = 140261 Score = 125 bits (63), Expect = 2e-25 Identities = 105/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| Sbjct: 14607 atacctttctcggccttttgactaagatcaagtgtagtatctgttcttattagtttaata 14666 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 | ||||| |||||||||||| |||| ||||||||||| | ||||||| ||||||| Sbjct: 14667 tatgatacgtgggccatgtgtccac--ggatattaaattagtattttgtgagggaggg 14722
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 125 bits (63), Expect = 2e-25 Identities = 105/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| Sbjct: 64022 atacctttctcggccttttgactaagatcaagtgtagtatctgttcttattagtttaata 64081 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttattttttgtgggggaggg 118 | ||||| |||||||||||| |||| ||||||||||| | ||||||| ||||||| Sbjct: 64082 tatgatacgtgggccatgtgtccac--ggatattaaattagtattttgtgagggaggg 64137
>gb|AY108052.1| Zea mays PCO079165 mRNA sequence Length = 1489 Score = 125 bits (63), Expect = 2e-25 Identities = 180/219 (82%) Strand = Plus / Plus Query: 376 cgctcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccact 435 |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 228 cgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcccagcgcgccacc 287 Query: 436 gccggtgggttgctcatcaccgaggccaccggcgtctccgacacggcacagggataccgc 495 ||||| |||||||| | |||||||| || || || | ||| || ||||| |||| Sbjct: 288 aggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcaggggtacccg 347 Query: 496 gatacgccaggcgtgtggacggcagagcacgtcgaggcatggaagcccatcgtcgatgcc 555 || || || ||| | |||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 348 gagactcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtcgacgcc 407 Query: 556 gtgcacgccaagggcgcgctcatcttctgccagatctgg 594 || ||| ||||||||| || || |||||||||||||| Sbjct: 408 gtccaccgcaagggcgccatcttcgtctgccagatctgg 446
>gb|AC132607.4| Mus musculus BAC clone RP23-447F22 from 12, complete sequence Length = 194101 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 37584 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 37643 Query: 67 atgt 70 |||| Sbjct: 37644 atgt 37647
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence Length = 193547 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 41971 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 41912 Query: 67 atgt 70 |||| Sbjct: 41911 atgt 41908
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 117 bits (59), Expect = 4e-23 Identities = 84/91 (92%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 17 tttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgatatgtgggcca 76 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 55028 tttggctaagatcaagtgtagtatctgtttttatcagtttaatatctgatatgtgggcca 55087 Query: 77 tgtgcccacaacgatattaaatttatttttt 107 |||||| ||||||||||||| ||||||| Sbjct: 55088 atggcccac-acgatattaaattaatttttt 55117
>gb|AC120391.6| Mus musculus chromosome 1, clone RP24-310B3, complete sequence Length = 172679 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 134847 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 134906 Query: 67 a 67 | Sbjct: 134907 a 134907
>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence Length = 203728 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 65162 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65103 Query: 67 a 67 | Sbjct: 65102 a 65102
>gb|AF147270.1| Papio hamadryas anubis U2 repeat unit sequence Length = 10589 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9436 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 9495 Query: 67 a 67 | Sbjct: 9496 a 9496
>gb|AF287992.1| Pan troglodytes U2 small nuclear RNA, complete sequence Length = 6107 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4923 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 4982 Query: 67 a 67 | Sbjct: 4983 a 4983
>gb|AF287991.1| Gorilla gorilla U2 small nuclear RNA, complete sequence Length = 6137 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4903 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 4962 Query: 67 a 67 | Sbjct: 4963 a 4963
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 237425 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 39793 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 39734 Query: 67 a 67 | Sbjct: 39733 a 39733
>gb|AC159964.5| Mus musculus chromosome 1, clone RP24-321N12, complete sequence Length = 179413 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 39857 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 39916 Query: 67 a 67 | Sbjct: 39917 a 39917
>emb|CR932438.14| Zebrafish DNA sequence from clone DKEY-250O4 in linkage group 13, complete sequence Length = 56325 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 30094 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 30153 Query: 67 a 67 | Sbjct: 30154 a 30154 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 24516 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 24457 Query: 67 a 67 | Sbjct: 24456 a 24456
>emb|BX004997.17| Zebrafish DNA sequence from clone DKEY-46E6 in linkage group 7, complete sequence Length = 200556 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 81654 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 81595 Query: 67 a 67 | Sbjct: 81594 a 81594
>emb|CR670819.2|CNS0FGKP Tetraodon nigroviridis full-length cDNA Length = 556 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65 Query: 67 a 67 | Sbjct: 66 a 66
>emb|CR660998.3|CNS0F8ZW Tetraodon nigroviridis full-length cDNA Length = 554 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 5 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 64 Query: 67 a 67 | Sbjct: 65 a 65
>gb|BC100035.1| Danio rerio nucleoporin 205, mRNA (cDNA clone MGC:111802 IMAGE:3818096), complete cds Length = 6312 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65 Query: 67 a 67 | Sbjct: 66 a 66
>gb|AC118772.5| Rattus norvegicus 10 BAC CH230-404C20 (Children's Hospital Oakland Research Institute) complete sequence Length = 178272 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 82785 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 82726 Query: 67 a 67 | Sbjct: 82725 a 82725 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtat 40 ||||| ||| |||||||||||||| ||||||||| Sbjct: 39934 ttctcagccctttggctaagatcaggtgtagtat 39967
>emb|AL929108.5| Zebrafish DNA sequence from clone CH211-239J9 in linkage group 6 Contains the 3' part of a novel gene similar to human and mouse SPAG1 (sperm associated antigen 1), a novel gene similar to human and mouse COX6C (cytochrome c oxidase, subunit VIc), a novel gene, a novel gene similar to mouse and human MBC2 (membrane bound C2 domain containing protein), a novel gene similar to vertebrate ITGB4BP (integrin beta 4 binding protein), the 3' part of novel gene similar to vertebrate MMP24 (membrane-inserted matrix metalloproteinase 24) and two predicted CpG islands, complete sequence Length = 161277 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 75597 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 75656 Query: 67 a 67 | Sbjct: 75657 a 75657
>emb|AL603711.6| Mouse DNA sequence from clone RP23-381B19 on chromosome 11 Contains the 3' end of the Slfn3 gene for schlafen 3, a novel gene, two schlafen (Slfn) pseudogenes, the Pex12 gene for peroxisomal biogenesis factor 12 and the Ap2b1 gene for adaptor-related protein complex 2 beta 1 subunit, complete sequence Length = 204523 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 134713 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 134654 Query: 67 a 67 | Sbjct: 134653 a 134653
>emb|BX927129.10| Zebrafish DNA sequence from clone DKEY-158N21 in linkage group 13, complete sequence Length = 154491 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 100719 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 100778 Query: 67 a 67 | Sbjct: 100779 a 100779 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 97350 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 97291 Query: 67 a 67 | Sbjct: 97290 a 97290
>gb|AC124036.5| Mus Musculus Strain C57BL6/J chromosome 11 BAC Clone RP24-100D7, Complete Sequence, complete sequence Length = 228907 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17260 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 17319 Query: 67 a 67 | Sbjct: 17320 a 17320
>dbj|AK022146.1| Homo sapiens cDNA FLJ12084 fis, clone HEMBB1002502 Length = 1955 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65 Query: 67 a 67 | Sbjct: 66 a 66
>dbj|AK169668.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005M15 product:RAD52 homolog B (S. cerevisiae), full insert sequence Length = 2084 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65 Query: 67 a 67 | Sbjct: 66 a 66
>dbj|AB179181.1| Macaca fascicularis testis cDNA clone: QtsA-14313, similar to human p21(CDKN1A)-activated kinase 6 (PAK6), mRNA, RefSeq: NM_020168.3 Length = 2549 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65 Query: 67 a 67 | Sbjct: 66 a 66
>emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in linkage group 7, complete sequence Length = 233826 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 96110 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 96051 Query: 67 a 67 | Sbjct: 96050 a 96050
>gb|U57614.1|HSU57614 Homo sapiens U2 snRNA (RNU2) gene, complete sequence of the repeat unit Length = 6132 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4887 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 4946 Query: 67 a 67 | Sbjct: 4947 a 4947
>gb|AC114905.10| Mus musculus chromosome 1, clone RP24-127K21, complete sequence Length = 168918 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 33144 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 33203 Query: 67 a 67 | Sbjct: 33204 a 33204 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 22349 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 22408 Query: 67 a 67 | Sbjct: 22409 a 22409 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 15082 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 15141 Query: 67 a 67 | Sbjct: 15142 a 15142 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4376 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 4435 Query: 67 a 67 | Sbjct: 4436 a 4436
>emb|X00093.1|XLRNU2 Xenopus laevis U2 snRNA gene Length = 831 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 365 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 424 Query: 67 a 67 | Sbjct: 425 a 425
>emb|X04212.1|RNU2RNA Rat (Novikoff hepatoma) U2 small nuclear RNA Length = 187 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65 Query: 67 a 67 | Sbjct: 66 a 66
>gb|AC120136.9| Mus musculus chromosome 1, clone RP23-277E3, complete sequence Length = 190159 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 171909 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 171968 Query: 67 a 67 | Sbjct: 171969 a 171969 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 161114 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 161173 Query: 67 a 67 | Sbjct: 161174 a 161174 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 153847 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 153906 Query: 67 a 67 | Sbjct: 153907 a 153907 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 143141 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 143200 Query: 67 a 67 | Sbjct: 143201 a 143201
>emb|X07913.1|MMU2SNR Mouse U2 snRNA gene Length = 1325 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1066 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 1125 Query: 67 a 67 | Sbjct: 1126 a 1126
>gb|L37793.1|HUMU2SN Homo sapiens small nuclear RNA (U2) gene Length = 5834 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4589 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 4648 Query: 67 a 67 | Sbjct: 4649 a 4649
>emb|AL713883.1|CNS07YP0 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 179H3 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 168835 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 74821 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 74880 Query: 67 a 67 | Sbjct: 74881 a 74881
>gb|M19204.1|HUMUG21 Human small nuclear U2 RNA gene Length = 187 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65 Query: 67 a 67 | Sbjct: 66 a 66
>gb|K02227.1|HUMUG2 Human U2 small nuclear RNA gene U2.24A Length = 379 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 197 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 256 Query: 67 a 67 | Sbjct: 257 a 257
>emb|AL590994.13| Mouse DNA sequence from clone RP23-382C19 on chromosome 11, complete sequence Length = 207814 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 99739 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 99798 Query: 67 a 67 | Sbjct: 99799 a 99799 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 87421 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 87362 Query: 67 a 67 | Sbjct: 87361 a 87361 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83249 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 83308 Query: 67 a 67 | Sbjct: 83309 a 83309 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 68867 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 68926 Query: 67 a 67 | Sbjct: 68927 a 68927 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 46351 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 46410 Query: 67 a 67 | Sbjct: 46411 a 46411
>gb|K02457.1|XELUGU2 X. laevis U2 small nuclear RNA gene Length = 188 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 65 Query: 67 a 67 | Sbjct: 66 a 66
>gb|M12856.1|CHKUGU2 Chicken U2 small nuclear RNA gene Length = 840 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 366 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 425 Query: 67 a 67 | Sbjct: 426 a 426
>emb|X01408.1|HSU2G Human gene for small nuclear RNA U2 Length = 540 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 264 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 323 Query: 67 a 67 | Sbjct: 324 a 324
>gb|K00033.1|RATUG2PA rat u2 small nuclear rna pseudogene Length = 298 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 56 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 115 Query: 67 a 67 | Sbjct: 116 a 116
>gb|K00034.1|RATUG2A rat u2 small nuclear rna gene and flanks Length = 930 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 425 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 484 Query: 67 a 67 | Sbjct: 485 a 485
>emb|X02665.1|HSSNRU2 Human gene for small nuclear RNA U2 (snRNA U2) Length = 975 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 264 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 323 Query: 67 a 67 | Sbjct: 324 a 324
>gb|K00027.1|MUSUG2A mouse u2 small nuclear rna (snrna) gene Length = 379 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 152 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 211 Query: 67 a 67 | Sbjct: 212 a 212
>gb|K00781.1|RATUR2 Rat U2 small nuclear RNA Length = 189 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 66 Query: 67 a 67 | Sbjct: 67 a 67
>gb|K03023.1|HUMUG2A Human small nuclear RNA U2 gene Length = 896 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 562 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 621 Query: 67 a 67 | Sbjct: 622 a 622
>gb|K03022.1|HUMUG20 Human U2 small nuclear RNA gene, clone U2/6 Length = 757 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 219 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 278 Query: 67 a 67 | Sbjct: 279 a 279
>gb|M33777.1|BABUGU2A Baboon U2 small nuclear RNA gene, complete cds Length = 680 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 196 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 255 Query: 67 a 67 | Sbjct: 256 a 256
>dbj|AP001160.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727F15, complete sequences Length = 184802 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 119105 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 119046 Query: 67 a 67 | Sbjct: 119045 a 119045
>dbj|AP000438.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-43M24, complete sequence Length = 148710 Score = 113 bits (57), Expect = 7e-22 Identities = 60/61 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9204 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 9145 Query: 67 a 67 | Sbjct: 9144 a 9144
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 111 bits (56), Expect = 3e-21 Identities = 194/240 (80%) Strand = Plus / Plus Query: 355 ctggccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtg 414 ||||| ||||| || || |||||||||||||||||||| |||||||| |||| || || Sbjct: 730 ctggcgccgctgacgcggcagcgctcctacggcaacgtcccgcagccgcacggcgccgtc 789 Query: 415 tactactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctcc 474 |||||| | ||||| ||||| || || | |||||||| |||||||| ||||||||| Sbjct: 790 tactacgcgcagcgcgccacccggggcggcctcctcatcactgaggccacgggcgtctcc 849 Query: 475 gacacggcacagggataccgcgatacgccaggcgtgtggacggcagagcacgtcgaggca 534 |||||||| ||||| ||| ||| ||||| || ||||||||| | || || || | ||| Sbjct: 850 gacacggcgcagggctacaccgacacgccgggagtgtggacgcccgaccaggtggcggcg 909 Query: 535 tggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 594 ||| ||||||||| || ||||| |||||||||||||| || ||||||||||| ||||| Sbjct: 910 tggcggcccatcgtagacgccgtccacgccaagggcgccgtcttcttctgccagctctgg 969
>gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete sequence Length = 129008 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 5 ctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctg 64 |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| Sbjct: 50419 ctttctcggccttttggctaagatcaagtgtagcatatgttcttatcagtttaatatctg 50478 Query: 65 atatgtgg 72 |||||||| Sbjct: 50479 atatgtgg 50486
>gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete sequence Length = 96907 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 5 ctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctg 64 |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| Sbjct: 20621 ctttctcggccttttggctaagatcaagtgtagcatatgttcttatcagtttaatatctg 20562 Query: 65 atatgtgg 72 |||||||| Sbjct: 20561 atatgtgg 20554
>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14, complete sequence Length = 151836 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 85803 ttctcggccttttggctaagatcaagtgtagtatctgttattatcagtttaatatctgat 85862 Query: 67 atgt 70 |||| Sbjct: 85863 atgt 85866
>emb|AJ505688.1|ATH505688 Arabidopsis thaliana partial putative U2 small nuclear RNA (U2 snRNA gene), clone Ath-191a, 5' end incomplete Length = 166 Score = 107 bits (54), Expect = 4e-20 Identities = 76/82 (92%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 26 gatcatgtgtagtatctgttcttatcagtttaatatctgatatgtgggccatgtgcccac 85 ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1 gatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccatcggcccac 60 Query: 86 aacgatattaaatttatttttt 107 |||||||||| | |||||||| Sbjct: 61 -acgatattaactctatttttt 81
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 107 bits (54), Expect = 4e-20 Identities = 239/298 (80%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 298 atccctctcctgacgccgtacaagatgggccagctcgaccttgcccatcggatcgtcctg 357 ||||| || |||||||||||||||||||| | | |||| || |||| || | || || Sbjct: 122 atcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctc 181 Query: 358 gccccgctcacccgccagcgctcctacggcaacgtgccgcagccacacgctgcagtgtac 417 || |||||||| || | |||||||||||||||||||||| ||| ||||| | ||||| Sbjct: 182 gcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtac 241 Query: 418 tactcccagcgtgccactgccggtgggttgctcatcaccgaggccaccggcgtctccgac 477 ||| | ||||| ||||| ||| || | ||| |||| ||||||||||||||||||||| Sbjct: 242 tacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgac 301 Query: 478 acggcacagggataccgcgatacgccaggcgtgtggacggcag-agcacgtcgaggcatg 536 || || ||||| |||| || || || ||| | |||||| ||| |||| |||||||| || Sbjct: 302 accgcgcagggctacccggacacccccggcatctggacg-cagcagcaggtcgaggcgtg 360 Query: 537 gaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatcttctgccagatctgg 594 ||||||||||||||| ||||| ||| ||||||||| ||| || |||||||| ||||| Sbjct: 361 gaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctgg 418
>gb|AC087650.12| Homo sapiens, clone RP11-100E5, complete sequence Length = 169598 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 57859 ttctcgtccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 57800 Query: 67 a 67 | Sbjct: 57799 a 57799
>emb|X01463.1|HSUG2P Human pseudogene U2/7 for U2 small nuclear RNA Length = 1824 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 916 ttctcgtccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 975 Query: 67 a 67 | Sbjct: 976 a 976
>dbj|AK127427.1| Homo sapiens cDNA FLJ45519 fis, clone BRTHA2024177 Length = 2898 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1349 ttctcgtccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 1408 Query: 67 a 67 | Sbjct: 1409 a 1409
>ref|NG_001257.1| Homo sapiens RNA, U2 small nuclear pseudogene 2 (RNU2P2) on chromosome 17 Length = 289 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106 ttctcgtccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 165 Query: 67 a 67 | Sbjct: 166 a 166
>gb|K02228.1|HUMUG2PS Human U2 small nuclear RNA pseudogene U2.21 Length = 366 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 183 ttctcgtccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgat 242 Query: 67 a 67 | Sbjct: 243 a 243
>emb|AL139801.17| Human DNA sequence from clone RP11-247M1 on chromosome 13 Contains a novel FLJ21562 containing gene, a novel gene, a novel pseudogene and a CpG island, complete sequence Length = 145481 Score = 103 bits (52), Expect = 6e-19 Identities = 62/64 (96%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 23026 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcag-ttaatatctgat 23084 Query: 67 atgt 70 |||| Sbjct: 23085 atgt 23088
>emb|AL133387.8| Human DNA sequence from clone RP11-107I14 on chromosome 10 Contains the 3' end of a novel gene, three novel genes (FLJ34886), the 5' end of the BTRC gene for beta-transducin repeat containing and four CpG islands, complete sequence Length = 157912 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 131677 ttctcggccttttggctaagatcaagtgtagtatctgttctcatcagtttagtatctgat 131618 Query: 67 atgt 70 |||| Sbjct: 131617 atgt 131614 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 8 tctcggccttttggctaagatcatgtgtagtat 40 |||||| |||||||||||||||| |||||||| Sbjct: 74182 tctcggtcttttggctaagatcaaatgtagtat 74214
>gb|AC157323.2| Dasypus novemcinctus, clone Dasypus novemcinctus-10241775F5, complete sequence Length = 40662 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 11 cggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgatatgt 70 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 37526 cggccttttggctaagatcaagtgtagtatctgttcttattagtttaatatctgatatgt 37467
>dbj|AP003068.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-399J13, complete sequence Length = 187934 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 107654 ttctcagccttttgggtaagatcaagtgtagtatctgttcttatcagtttaatatctgat 107713 Query: 67 atgt 70 |||| Sbjct: 107714 atgt 107717
>dbj|AP001873.3| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2011H1, complete sequence Length = 44621 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2388 ttctcagccttttgggtaagatcaagtgtagtatctgttcttatcagtttaatatctgat 2447 Query: 67 atgt 70 |||| Sbjct: 2448 atgt 2451
>gb|S64585.1| SpU2E=U2 snRNA [Strongylocentrotus purpuratus=sea urchins, Genomic, 910 nt] Length = 910 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 504 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagcttaatatctga 562
>gb|S64581.1| LvU2E=U2 snRNA [Lytechinus variegatus=sea urchins, Genomic, 1046 nt] Length = 1046 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 740 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagcttaatatctga 798
>gb|S64577.1| LvU2L=U2 snRNA [Lytechinus variegatus=sea urchins, Genomic, 1204 nt] Length = 1204 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 899 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagcttaatatctga 957
>ref|NR_002566.1| Strongylocentrotus purpuratus RNA, U2 small nuclear (U2) Length = 910 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 504 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagcttaatatctga 562
>gb|S64589.1|S64589 {U2} [Lytechinus variegatus=sea urchins, snRNA, 189 nt] Length = 189 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 6 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagcttaatatctga 64
>gb|M58447.1|SUSUG2E Strongylocentrotus purpuratus U2 snRNA (SpU2E) gene Length = 920 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 512 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagcttaatatctga 570
>gb|M58449.1|SULUG2L Lytechinus variegatus U2 snRNA (LvU2L) gene Length = 1204 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 899 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagcttaatatctga 957
>gb|M58448.1|SULUG2E Lytechinus variegatus U2 snRNA (LvU2E) gene Length = 1060 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 740 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagcttaatatctga 798
>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence Length = 210548 Score = 99.6 bits (50), Expect = 1e-17 Identities = 53/54 (98%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 193180 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 193233
>emb|AL158828.14| Human DNA sequence from clone RP11-359J6 on chromosome 9 Contains a novel gene and a novel pseudogene, complete sequence Length = 213728 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 38356 ttctcagccttttggctaagatcgggtgtagtatctgttcttatcagtttaatatctgat 38297 Query: 67 at 68 || Sbjct: 38296 at 38295
>gb|AY007785.1| Diplonema papillatum spliced leader RNA and 5S ribosomal RNA genes, complete sequence Length = 1242 Score = 99.6 bits (50), Expect = 1e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| Sbjct: 854 ttctcggccttttggctaagatcaagngtagtatctgttcttatcagcttaatatctgat 913 Query: 67 a 67 | Sbjct: 914 a 914
>gb|AC154881.6| Mus musculus chromosome 15, clone RP24-259H19, complete sequence Length = 180231 Score = 99.6 bits (50), Expect = 1e-17 Identities = 53/54 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 157974 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaata 157921 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatca 30 |||| ||||||||||||||||||| Sbjct: 130435 ttcttggccttttggctaagatca 130458
>gb|AF095839.1|AF095839 Entosiphon sulcatum trans-spliced leader SL, 5S ribosomal RNA, U5 snRNA, U1 snRNA, and U2 snRNA genes, complete sequence Length = 2521 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||| Sbjct: 1581 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagcttaatttctgat 1522 Query: 67 at 68 || Sbjct: 1521 at 1520
>emb|AL731833.7| Mouse DNA sequence from clone RP23-72P19 on chromosome X, complete sequence Length = 170932 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 10 tcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgata 67 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 65850 tcggccttttggctaagatcaagtgtagtatctgttcttatcaatttaatatctgata 65793
>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence Length = 127696 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 ||||||||||||||||||| |||||||| | ||||||||||||||||||| | ||||||| Sbjct: 51226 atacctttctcggccttttagctaagattaagtgtagtatctgttcttattaatttaata 51285 Query: 61 tctgatatgtgggccat 77 ||| |||||||| |||| Sbjct: 51286 tcttatatgtggaccat 51302
>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence Length = 180971 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 5 ctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctg 64 |||||||||||||||||||||||| ||||||| ||| | |||||||||||||||||| || Sbjct: 101152 ctttctcggccttttggctaagataatgtgtaatatttattcttatcagtttaatatatg 101093 Query: 65 atatgtgggccat 77 |||||||| |||| Sbjct: 101092 atatgtggaccat 101080
>gb|AC107059.6| Homo sapiens BAC clone RP11-668G10 from 4, complete sequence Length = 48546 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 16905 ttcttggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatccgat 16846 Query: 67 a 67 | Sbjct: 16845 a 16845
>emb|X00381.1|HSRN07 Human pseudogene for U2 small nuclear RNA Length = 117 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 26 ttcttggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatccgat 85 Query: 67 a 67 | Sbjct: 86 a 86
>gb|AC099784.2| Homo sapiens chromosome 1 clone RP11-159C21, complete sequence Length = 163167 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 6 tttctcggccttttggctaagatcatgtgtagtatctgttcttatcagttta 57 ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 69184 tttctcggccttttggctaagatcaagtgtagtatctgttcttatcagttta 69133
>gb|AC129569.17| Mus musculus chromosome 5, clone RP23-121M13, complete sequence Length = 199799 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaa 58 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 91174 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaa 91123
>emb|AL392044.7| Human DNA sequence from clone RP11-195E11 on chromosome 9 Contains the 5' end of a novel gene (MGC21981), three novel genes and a CpG island, complete sequence Length = 167206 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 16 ttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgatatgt 70 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 166624 ttttggctaagatcaagtgtagtatctgttcttataagtttaatatctgatatgt 166570
>emb|X54113.1|POH4H3 P.ochraceus histone genes H4 and H3 Length = 2396 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 235 ttctcggccttttggctaagatcatgtgtagtatctgttcttttcagaataatatctga 293
>gb|AC008677.5| Homo sapiens chromosome 5 clone CTB-47B8, complete sequence Length = 160929 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 16 ttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgatatgt 70 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 107611 ttttggctaagatcaagtgtagtatctgttcttatcagtttaatatttgatatgt 107665
>ref|NG_001256.1| Homo sapiens RNA, U2 small nuclear pseudogene 3 (RNU2P3) on chromosome 9 Length = 177 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 16 ttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgatatgt 70 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 15 ttttggctaagatcaagtgtagtatctgttcttataagtttaatatctgatatgt 69
>emb|X71483.1|CRRNAU2 C.reinhardtii U2 snRNA Length = 192 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaat 59 ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 1 atacctttctcggccttttggctcagatcatgtgtagtatctgttcttataagcttaat 59
>gb|K00779.1|HUMUG2PA human u2.7 small nuclear rna pseudogene Length = 177 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 16 ttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgatatgt 70 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 15 ttttggctaagatcaagtgtagtatctgttcttataagtttaatatctgatatgt 69
>gb|AY765368.1| Crassostrea gigas clone 3B 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1091 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 645 ttctcggccttttggctaagatcaaagtgtagtatctgttcttatcagcttaatatctga 586 Query: 66 ta 67 || Sbjct: 585 ta 584
>gb|AY765367.1| Crassostrea gigas clone 3A 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1100 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 654 ttctcggccttttggctaagatcaaagtgtagtatctgttcttatcagcttaatatctga 595 Query: 66 ta 67 || Sbjct: 594 ta 593
>gb|AY765366.1| Crassostrea gigas clone 2A 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1114 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 666 ttctcggccttttggctaagatcaaagtgtagtatctgttcttatcagcttaatatctga 607 Query: 66 ta 67 || Sbjct: 606 ta 605
>gb|AY765365.1| Crassostrea gigas clone 1B 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1096 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 650 ttctcggccttttggctaagatcaaagtgtagtatctgttcttatcagcttaatatctga 591 Query: 66 ta 67 || Sbjct: 590 ta 589
>gb|AY765364.1| Crassostrea gigas clone 1A 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1117 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 669 ttctcggccttttggctaagatcaaagtgtagtatctgttcttatcagcttaatatctga 610 Query: 66 ta 67 || Sbjct: 609 ta 608
>gb|AY765362.1| Crassostrea angulata clone 3A 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1090 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 645 ttctcggccttttggctaagatcaaagtgtagtatctgttcttatcagcttaatatctga 586 Query: 66 ta 67 || Sbjct: 585 ta 584
>gb|AY765361.1| Crassostrea angulata clone 2B 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1103 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 656 ttctcggccttttggctaagatcaaagtgtagtatctgttcttatcagcttaatatctga 597 Query: 66 ta 67 || Sbjct: 596 ta 595
>gb|AY765360.1| Crassostrea angulata clone 2A 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1093 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 646 ttctcggccttttggctaagatcaaagtgtagtatctgttcttatcagcttaatatctga 587 Query: 66 ta 67 || Sbjct: 586 ta 585
>emb|CR679054.3|CNS0FMWQ Tetraodon nigroviridis full-length cDNA Length = 539 Score = 91.7 bits (46), Expect = 2e-15 Identities = 49/50 (98%) Strand = Plus / Plus Query: 18 ttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgata 67 ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 ttggctaagatcaagtgtagtatctgttcttatcagtttaatatctgata 50
>emb|AL138795.21| Human DNA sequence from clone RP4-790G17 on chromosome 1q21.1-21.3 Contains the ANP32E gene for acidic (leucine-rich) nuclear phosphoprotein 32 family, member E, the CA14 gene for carbonic anhydrase XIV, the gene for a likely ortholog of C. elegans anterior pharynx defective 1A (APH-1A), the gene for a novel protein (FLJ23221), a novel gene and the MRPS21 gene for mitochondrial ribosomal protein S21, complete sequence Length = 132823 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||||| Sbjct: 51112 ttctctgccttttggctaagatcaagtgtaggatctgttcttaacagtttaatatctgat 51171 Query: 67 at 68 || Sbjct: 51172 at 51173
>ref|NR_002716.1| Homo sapiens RNA, U2 small nuclear (RNU2) on chromosome 17 Length = 186 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/61 (95%), Gaps = 2/61 (3%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttc--atcagtttaatatctgat 63 Query: 67 a 67 | Sbjct: 64 a 64
>emb|Z37972.1|STU2SRN15 S.tuberosum gene encoding U2 snRNA Length = 229 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagt 54 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 1 atacctttctcggccttttggctaagatcaagtgtagtatctgttcatatcagt 54
>emb|AL591390.8| Mouse DNA sequence from clone RP23-355L10 on chromosome 11, complete sequence Length = 186134 Score = 91.7 bits (46), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 6 tttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 31765 tttctcagccttttg-ctaagatcaagtgtagtatctgttcttatcagtttaatatctga 31823 Query: 66 ta 67 || Sbjct: 31824 ta 31825
>emb|X59360.1|HSU2SNRNA H.sapiens U2 snRNA Length = 186 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/61 (95%), Gaps = 2/61 (3%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttc--atcagtttaatatctgat 63 Query: 67 a 67 | Sbjct: 64 a 64
>emb|AL445988.8| Human DNA sequence from clone RP11-625P7 on chromosome 6 Contains a novel gene, complete sequence Length = 63196 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 5 ctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatat 61 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 16632 ctttctcagccttttggctaagatctagtgtagtatctgttcttatcagtttaatat 16576
>emb|AL035652.8|HS1J6 Human DNA sequence from clone RP1-1J6 on chromosome 20 Contains the 5' end of the TOP1 gene for topoisomerase (DNA) I and the 3' end of a novel gene, complete sequence Length = 88827 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 8113 ttcttggccttctggctaagatcatgtgcagtatctgttcttaccagtttaatatctgat 8172 Query: 67 a 67 | Sbjct: 8173 a 8173
>emb|CR612573.1| full-length cDNA clone CS0DI068YN03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1774 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 810 ttcttggccttctggctaagatcatgtgcagtatctgttcttaccagtttaatatctgat 869 Query: 67 a 67 | Sbjct: 870 a 870
>emb|CR593014.1| full-length cDNA clone CS0DI064YD15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1862 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 733 ttcttggccttctggctaagatcatgtgcagtatctgttcttaccagtttaatatctgat 792 Query: 67 a 67 | Sbjct: 793 a 793
>dbj|AK023614.1| Homo sapiens cDNA FLJ13552 fis, clone PLACE1007218 Length = 1850 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 685 ttcttggccttctggctaagatcatgtgcagtatctgttcttaccagtttaatatctgat 744 Query: 67 a 67 | Sbjct: 745 a 745
>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0055I24 Length = 155872 Score = 89.7 bits (45), Expect = 1e-14 Identities = 91/105 (86%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 1 atacctttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaata 60 |||||||||||||||||| ||||||||||| || || |||| |||||||| | |||| || Sbjct: 126884 atacctttctcggccttt-ggctaagatcaagtataatatcggttcttattattttatta 126942 Query: 61 tctgatatgtgggccatgtgcccacaacgatattaaatttatttt 105 ||||||| ||||| |||| ||| || | ||||||||||||||||| Sbjct: 126943 tctgatacgtgggtcatgagcctacgatgatattaaatttatttt 126987
>gb|AC147121.2| Mus musculus BAC clone RP24-160L14 from chromosome 7, complete sequence Length = 185191 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 12 ggccttttggctaagatcatgtgtagtatctgttcttatcagtttaat 59 ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 128178 ggccttttggctaagatcaagtgtagtatctgttcttatcagtttaat 128131 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgta 36 |||||||||||||||||||||||| ||||| Sbjct: 120221 ttctcggccttttggctaagatcaagtgta 120250
>emb|X63786.1|TTSNRU23 T.thermophila genes for snRNA U2-3, snRNA U2-4 Length = 1412 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagt 54 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1157 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 1204 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagt 54 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 554 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 601
>emb|X63785.1|TTSNRU22 T.thermophila gene for snRNA U2-2 Length = 1283 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagt 54 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 749 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 796
>emb|X63784.1|TTSNRU21 T.thermophila gene for snRNA U2-1 Length = 877 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagt 54 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 417 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 464
>emb|X58846.1|TTU22 T.thermophila U2.2 snRNA Length = 193 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagt 54 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 53
>emb|X58842.1|TTU21 T.thermophila U2.1 snRNA Length = 193 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagt 54 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 53
>emb|AL590452.12| Human DNA sequence from clone RP11-326G21 on chromosome 1 Contains the 5' end of the PDE4DIP gene for phosphodiesterase 4D interacting protein (myomegalin) and a CpG island, complete sequence Length = 156813 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaa 58 |||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 42446 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagcttaa 42497
>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167071 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaa 58 ||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 126548 ttctcggcctttttgctaagatcaagtgtagtatctgttcttatcagtttaa 126599
>gb|AC158555.6| Mus musculus chromosome 3, clone RP23-14B10, complete sequence Length = 208510 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 14 ccttttggctaagatcatgtgtagtatctgttcttatcagtttaatat 61 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 114614 ccttttggctaagatcaagtgtagtatctgttcttatcagtttaatat 114661
>gb|AC018922.22| Homo sapiens 12 BAC RP11-485C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166256 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaa 58 ||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 146729 ttctcggcctttttgctaagatcaagtgtagtatctgttcttatcagtttaa 146678
>gb|AC017104.8| Homo sapiens BAC clone RP11-562I5 from 2, complete sequence Length = 168880 Score = 87.7 bits (44), Expect = 4e-14 Identities = 60/64 (93%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 ||||| |||||||||||||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 110723 ttctcagccttttggctaagatcaagtgtagtatctgtt-ttttcagtttaatatctgat 110665 Query: 67 atgt 70 |||| Sbjct: 110664 atgt 110661
>gb|AC011994.10| Homo sapiens BAC clone RP11-50E1 from 2, complete sequence Length = 176933 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaa 58 ||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 82247 ttctcggccttttggctaagaccaagtgtagtatctgttcttatcagtttaa 82196
>emb|BX293537.10| Mouse DNA sequence from clone RP23-240M8 on chromosome X, complete sequence Length = 163726 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgat 66 |||| ||||||||||||||||||| || ||||||||||||||||||||| ||||| |||| Sbjct: 60372 ttcttggccttttggctaagatcaagtatagtatctgttcttatcagttcaatatatgat 60313 Query: 67 atgt 70 |||| Sbjct: 60312 atgt 60309
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 87.7 bits (44), Expect = 4e-14 Identities = 121/144 (84%), Gaps = 2/144 (1%) Strand = Plus / Plus Query: 452 tcaccgaggccaccggcgtctccgacacggcacagggataccgcgatacgccaggcgtgt 511 |||| ||||||||||||||||||||||| || ||||| |||| || || || ||| | | Sbjct: 259 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 318 Query: 512 ggacggcag-agcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggc 570 ||||| ||| |||| |||||||| ||||||||||||||||| ||||| ||| ||||||| Sbjct: 319 ggacg-cagcagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggc 377 Query: 571 gcgctcatcttctgccagatctgg 594 || ||| || |||||||| ||||| Sbjct: 378 gccctcttcatctgccagctctgg 401 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 atccctctcctgacgccgtacaagatggg 326 ||||| || |||||||||||||||||||| Sbjct: 123 atcccgctgctgacgccgtacaagatggg 151
>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence Length = 228892 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 12 ggccttttggctaagatcatgtgtagtatctgttcttatcagtttaat 59 ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31063 ggccttttggctaagatcaagtgtagtatctgttcttatcagtttaat 31016 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgta 36 |||||||||||||||||||||||| ||||| Sbjct: 23106 ttctcggccttttggctaagatcaagtgta 23135
>gb|DQ114948.1| Moneuplotes crassus clone pEC1 U2 snRNA gene, complete sequence; macronuclear Length = 545 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagt 54 |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 188
>emb|AL133500.4|HSP12 Homo sapiens chromosome X sequence from BAC CEPHB328P12 map Xq13 region PHKA1-DXS227, complete sequence Length = 201387 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 12 ggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgata 67 ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| Sbjct: 66176 ggccttttggctaagttcaagtgtagtatctgtccttatcagtttaatatctgata 66121
>emb|AL596457.6| Human DNA sequence from clone RP11-523P2 on chromosome Xq13.1-13.3, complete sequence Length = 86688 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 12 ggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctgata 67 ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| Sbjct: 50313 ggccttttggctaagttcaagtgtagtatctgtccttatcagtttaatatctgata 50368
>gb|K00786.1|HUMUG2PB human u2.13 small nuclear rna pseudogene Length = 88 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaa 58 |||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 23 ttctcggccttttggctaagatcaagtgtagtatctgttcttatcagcttaa 74
>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds Length = 1409 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 376 cgctcctacggcaacgtgccgcagccacacgctgcagtgtactactcccagcgtgccac 434 |||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 191 cgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcgcagcgcgccac 249 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 520 gagcacgtcgaggcatggaagcccatcgtcgatgccgtgcacgccaagggcgcgctcatc 579 ||||| |||||||| ||||||||||||||||| ||||| ||| ||||||||| || || Sbjct: 335 gagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccatcttc 394 Query: 580 ttctgccagatctgg 594 |||||||||||||| Sbjct: 395 gtctgccagatctgg 409
>gb|AY765363.1| Crassostrea angulata clone 3B 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1103 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/62 (93%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| Sbjct: 657 ttctcggccttttggctaagatcaaagtgnagtatctgttcttatcagcttaatatctga 598 Query: 66 ta 67 || Sbjct: 597 ta 596
>gb|AY765359.1| Crassostrea angulata clone 1B 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1091 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/62 (93%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| Sbjct: 645 ttctcggccttttggctaagatcaaagngtagtatctgttcttatcagcttaatatctga 586 Query: 66 ta 67 || Sbjct: 585 ta 584
>ref|NM_001014854.2| Bos taurus WD repeat domain 74 (WDR74), mRNA Length = 1763 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 21 gctaagatcatgtgtagtatctgttcttatcagtttaatatctgata 67 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 gctaagatcaagtgtagtatctgttcttatcagtttaatatctgata 47
>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete sequence Length = 225721 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||| ||||||||||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 42903 ttctgggccttttggctaagatcaagtatagtatctgttcttatcagtttaatgtctga 42961
>emb|AL161454.10| Human DNA sequence from clone RP11-72B4 on chromosome 9 Contains the gene for a novel protein similar to putative repair and recombination helicase RAD26L (LOC56959), a parkinson disease 7 (PARK7) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 144536 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 12 ggccttttggctaagatcatgtgtagtatctgttcttatcagtttaa 58 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 111590 ggccttttggctaagatcaagtgtagtatctgttcttatcagtttaa 111544
>gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, complete sequence Length = 171468 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatat 61 ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 121400 ttctcagccttttggctaagatcaagtgtagtagctgttcttatcagtttaatat 121454
>gb|BT021738.1| Bos taurus hypothetical protein FLJ10439 (FLJ10439), mRNA, complete cds Length = 1763 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 21 gctaagatcatgtgtagtatctgttcttatcagtttaatatctgata 67 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 gctaagatcaagtgtagtatctgttcttatcagtttaatatctgata 47
>gb|AC164879.2| Mus musculus BAC clone RP23-354H10 from chromosome 14, complete sequence Length = 210602 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 7 ttctcggccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatctga 65 |||| ||||||||||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 187840 ttctgggccttttggctaagatcaagtatagtatctgttcttatcagtttaatgtctga 187898
>gb|AY765358.1| Crassostrea angulata clone 1A 5S ribosomal RNA and U2 small nuclear RNA genes, complete sequence Length = 1103 Score = 83.8 bits (42), Expect = 6e-13 Identities = 58/62 (93%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 7 ttctcggccttttggctaagatcat-gtgtagtatctgttcttatcagtttaatatctga 65 |||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| Sbjct: 657 ttctcggccttttggctaagatcaaagagtagtatctgttcttatcagcttaatatctga 598 Query: 66 ta 67 || Sbjct: 597 ta 596
>gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, complete sequence Length = 177385 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 14 ccttttggctaagatcatgtgtagtatctgttcttatcagtttaatatct 63 |||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 2354 ccttttggctaagaacaagtgtagtatctgttcttatcagtttaatatct 2403 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,843,361 Number of Sequences: 3902068 Number of extensions: 5843361 Number of successful extensions: 122710 Number of sequences better than 10.0: 2399 Number of HSP's better than 10.0 without gapping: 2408 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 116272 Number of HSP's gapped (non-prelim): 6308 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
