ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25a08 |
|---|---|
| Clone Library Name | barley_pub |
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 85.1 bits (209), Expect = 1e-16 Identities = 36/71 (50%), Positives = 46/71 (64%) Frame = +3 Query: 369 SGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 S F+CNICLD A D VV+LCGHL+CWPC+ +WL D Q CPVCK+A+ Sbjct: 21 SARFECNICLDAAKDAVVSLCGHLFCWPCLSQWL----------DTRPNNQVCPVCKSAI 70 Query: 549 SADSLVPLYGR 581 + +VP+YGR Sbjct: 71 DGNKVVPIYGR 81
>PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 306 Score = 55.1 bits (131), Expect = 1e-07 Identities = 27/102 (26%), Positives = 48/102 (47%) Frame = +3 Query: 267 DQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYC 446 DQ ++++T++ + D + I G+ C++C++F P T CGH++C Sbjct: 227 DQHTISSITDERDLEDKNKLPFIP----------EGNRKCSLCMEFIHCPAATECGHIFC 276 Query: 447 WPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSLVPL 572 W CI W TS + +CP+C+A S ++ L Sbjct: 277 WSCINGW-------------TSKKSECPLCRAFSSPSKIILL 305
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 55.1 bits (131), Expect = 1e-07 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCP 530 +T+T G C +CL P T CGH++CW CI EW + +Q+CP Sbjct: 318 STSTEAVGK--CTLCLSTRQHPTATPCGHVFCWSCIMEW-------------CNEKQECP 362 Query: 531 VCKAALSADSLVPLY 575 +C+ + SLV LY Sbjct: 363 LCRTPNTHSSLVCLY 377
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 53.9 bits (128), Expect = 3e-07 Identities = 21/63 (33%), Positives = 33/63 (52%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C +CL DP CGH++CW C+ +W++ RQ+CP+C+A + L Sbjct: 245 CMLCLSPMKDPSCGECGHVFCWKCVLDWVK-------------ERQECPLCRAKMRESQL 291 Query: 564 VPL 572 +PL Sbjct: 292 LPL 294
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 53.1 bits (126), Expect = 6e-07 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 2/97 (2%) Frame = +3 Query: 282 AAMTNQPSVSDN--KLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPC 455 A +N PS +D +L K + +M ++GS +C ICLD PV+T C H++C PC Sbjct: 725 AVSSNGPSGNDTPEELRKKLIRKMKLILSSGSDE-ECAICLDSLTVPVITHCAHVFCKPC 783 Query: 456 IYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSLV 566 I + ++ N +CP+C+ + D+L+ Sbjct: 784 ICQVIQ----------NEQPHAKCPLCRNDIHEDNLL 810
>TRIM7_MOUSE (Q923T7) Tripartite motif protein 7 (Glycogenin-interacting| protein) Length = 510 Score = 51.2 bits (121), Expect = 2e-06 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Frame = +3 Query: 330 NISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYE-WLRPSVVSATSGDN 506 N E A A G C+ICL+F +PV CGH +C CI W RP + T+ Sbjct: 11 NAGAEALALAAELQGEATCSICLEFFREPVSVECGHSFCRACIMRCWERPGAGTGTATRT 70 Query: 507 TSARQQCPVCKAALSADSLVP 569 CP C+ L P Sbjct: 71 LPCPLPCPQCREPARPSQLRP 91
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 50.8 bits (120), Expect = 3e-06 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%) Frame = +3 Query: 300 PSVSDN--KLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 PS +D +L K + +M ++GS +C ICLD PV+T C H++C PCI + ++ Sbjct: 728 PSGNDTPEELRKKLIKKMKLILSSGSDE-ECAICLDSLTVPVITHCAHVFCKPCICQCIQ 786 Query: 474 PSVVSATSGDNTSARQQCPVCKAALSADSLV 566 N +CP+C+ + D+L+ Sbjct: 787 ----------NEQPHAKCPLCRNDIHGDNLL 807
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 49.7 bits (117), Expect = 6e-06 Identities = 30/88 (34%), Positives = 42/88 (47%) Frame = +3 Query: 300 PSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPS 479 PS + L + E+P T SFDC +CL+ PV T CGH++C CI Sbjct: 14 PSATPRALERRGDPELPVT------SFDCAVCLEVLHQPVRTRCGHVFCRSCI------- 60 Query: 480 VVSATSGDNTSARQQCPVCKAALSADSL 563 ATS N + CP C+A L ++ + Sbjct: 61 ---ATSLKNN--KWTCPYCRAYLPSEGV 83
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)| Length = 232 Score = 49.7 bits (117), Expect = 6e-06 Identities = 29/87 (33%), Positives = 44/87 (50%) Frame = +3 Query: 303 SVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSV 482 S + L ++ E+P T SFDC++CL+ PV T CGH++C CI Sbjct: 15 SATPRTLERSGDSELPIT------SFDCSVCLEVLHQPVRTRCGHVFCRSCI-------- 60 Query: 483 VSATSGDNTSARQQCPVCKAALSADSL 563 ATS N + + CP C+A L ++ + Sbjct: 61 --ATSIKNNN-KWTCPYCRAYLPSEGV 84
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 49.3 bits (116), Expect = 8e-06 Identities = 24/55 (43%), Positives = 34/55 (61%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 +F C+ICL+ +P CGHL+CW CI E V+ATS +TS+ +CP C+ Sbjct: 252 TFQCSICLE-NKNPSALFCGHLFCWTCIQE----HAVAATSSASTSS-ARCPQCR 300
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 48.9 bits (115), Expect = 1e-05 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Frame = +3 Query: 300 PSVSDN--KLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 PS SD +L K + +M ++GS +C ICLD PV+T C H++C PCI + + Sbjct: 725 PSRSDTPEELRKMLIEKMKIILSSGSDE-ECAICLDSLTFPVITHCAHVFCKPCICQVIH 783 Query: 474 PSVVSATSGDNTSARQQCPVCKAALSADSLV 566 + +CP+C+ + D+L+ Sbjct: 784 ----------SEQPHAKCPLCRNEIHGDNLL 804
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 48.5 bits (114), Expect = 1e-05 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C +CL+ P T CGHL+CW CI W S++ +CP+C+ L Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAW-------------CSSKAECPLCREKFPPQKL 319 Query: 564 VPL 572 + L Sbjct: 320 IYL 322
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 48.5 bits (114), Expect = 1e-05 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C +CL+ P T CGHL+CW CI W S++ +CP+C+ L Sbjct: 273 CTLCLEERRHPTATPCGHLFCWECITAW-------------CSSKAECPLCREKFPPQKL 319 Query: 564 VPL 572 + L Sbjct: 320 IYL 322
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 47.0 bits (110), Expect = 4e-05 Identities = 29/87 (33%), Positives = 41/87 (47%) Frame = +3 Query: 303 SVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSV 482 S + L + E+P T SFDC +CL+ PV T CGH++C CI Sbjct: 15 SATARALERRRDPELPVT------SFDCAVCLEVLHQPVRTRCGHVFCRSCI-------- 60 Query: 483 VSATSGDNTSARQQCPVCKAALSADSL 563 ATS N + CP C+A L ++ + Sbjct: 61 --ATSLKNN--KWTCPYCRAYLPSEGV 83
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 46.6 bits (109), Expect = 5e-05 Identities = 23/64 (35%), Positives = 36/64 (56%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C+ICLD+ DPV CGH++C C + +RP SG+ R CP+CK +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTSD-IRP-----ISGN----RPVCPLCKKPFKKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 46.6 bits (109), Expect = 5e-05 Identities = 21/64 (32%), Positives = 35/64 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C+ICLD+ DPV CGH++C C + +RP + +R CP+CK +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTD-VRPI---------SGSRPVCPLCKKPFKKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 46.6 bits (109), Expect = 5e-05 Identities = 21/64 (32%), Positives = 35/64 (54%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C+ICLD+ DPV CGH++C C + +RP + +R CP+CK +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTD-VRPI---------SGSRPVCPLCKKPFKKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 46.6 bits (109), Expect = 5e-05 Identities = 23/64 (35%), Positives = 36/64 (56%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C+ICLD+ DPV CGH++C C + +RP SG+ R CP+CK +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTSD-IRP-----ISGN----RPVCPLCKKPFKKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>PSH1_YEAST (Q12161) RING finger protein PSH1 (POB3/SPT16 histone-associated| protein 1) Length = 406 Score = 46.2 bits (108), Expect = 7e-05 Identities = 23/79 (29%), Positives = 35/79 (44%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSAT 494 N+L+ G A S C+IC D+ P++T CGH YC+ C+ W Sbjct: 7 NRLLHQNDGTKDAILYKIIESLVCSICHDYMFVPMMTPCGHNYCYGCLNTWF-------- 58 Query: 495 SGDNTSARQQCPVCKAALS 551 NT CP C++ ++ Sbjct: 59 -ASNTQKELACPQCRSDIT 76
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 46.2 bits (108), Expect = 7e-05 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C+ICLD+ DPV CGH++C C + + SG R CP+CK + +++ Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTD------IHPVSG----GRPVCPLCKKPFTKENI 65 Query: 564 VPLY 575 P++ Sbjct: 66 RPVW 69
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313| Length = 230 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQC 527 PA G F C +CL+ PV CGH++C C+ E L+P + C Sbjct: 19 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPK------------KPVC 66 Query: 528 PVCKAALS 551 VC++AL+ Sbjct: 67 GVCRSALA 74
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/58 (37%), Positives = 28/58 (48%) Frame = +3 Query: 366 GSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 GSG F C ICL+ +PV CGH +C C+ T G AR CP+C+ Sbjct: 3 GSGPFSCPICLEPLREPVTLPCGHNFCLACLGALWPHRSAGGTGGSGGPAR--CPLCQ 58
>ZN313_PANTR (Q6J212) Zinc finger protein 313| Length = 228 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQC 527 PA G F C +CL+ PV CGH++C C+ E L+P + C Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPK------------KPVC 64 Query: 528 PVCKAALS 551 VC++AL+ Sbjct: 65 GVCRSALA 72
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)| Length = 228 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQC 527 PA G F C +CL+ PV CGH++C C+ E L+P + C Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPK------------KPVC 64 Query: 528 PVCKAALS 551 VC++AL+ Sbjct: 65 GVCRSALA 72
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/68 (32%), Positives = 33/68 (48%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQC 527 PA+ T F C +CL+ PV CGH++C C+ E L+P + C Sbjct: 18 PASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPK------------KPVC 65 Query: 528 PVCKAALS 551 VC++AL+ Sbjct: 66 GVCRSALA 73
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 45.4 bits (106), Expect = 1e-04 Identities = 22/68 (32%), Positives = 33/68 (48%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQC 527 PA+ T F C +CL+ PV CGH++C C+ E L+P + C Sbjct: 18 PASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPK------------KPVC 65 Query: 528 PVCKAALS 551 VC++AL+ Sbjct: 66 GVCRSALA 73
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/58 (37%), Positives = 29/58 (50%) Frame = +3 Query: 366 GSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 GSG F C ICL+ +PV CGH +C C+ S G +AR CP+C+ Sbjct: 3 GSGPFSCPICLEPLREPVTLPCGHNFCLACLGALWPHRGASGAGGPGGAAR--CPLCQ 58
>TRI17_MOUSE (Q7TPM3) Tripartite motif protein 17| Length = 477 Score = 44.3 bits (103), Expect = 3e-04 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI-YEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C+ICLD+ DPV+T CGH +C CI W + V S CP C+ + Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWEKGKVKKGKKKQKGSF--PCPECREMSPQRN 73 Query: 561 LVP 569 L P Sbjct: 74 LRP 76
>ZN313_PIG (Q6J1I8) Zinc finger protein 313| Length = 228 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQC 527 PA G F C +CL+ PV CGH++C C+ E L+P + C Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPK------------KPVC 64 Query: 528 PVCKAALS 551 VC++ L+ Sbjct: 65 GVCRSTLA 72
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 43.9 bits (102), Expect = 3e-04 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 C +CL +DP CGHL+CW C+ W + R +CP+C+ Sbjct: 286 CILCLMNMSDPSCAPCGHLFCWSCLMSWCK-------------ERPECPLCR 324
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 43.9 bits (102), Expect = 3e-04 Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Frame = +3 Query: 264 MDQVCMAAMTNQP-SVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHL 440 +D + + N P SVS N + E+ G+ S +C ICL+ A DPV+T C H Sbjct: 1000 LDSLARRFLDNNPDSVSQNAPSRAYIEEVIQDLRDGN-SKECPICLESADDPVLTPCAHR 1058 Query: 441 YCWPCIY-EWLRPSVVSATSGDNTSARQQCPVCKAALSADSLV 566 C C+ W PS CP+C+ L L+ Sbjct: 1059 MCRECLLTSWRSPSC------------GLCPICRTILKRTELI 1089
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 43.5 bits (101), Expect = 4e-04 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQ---CPVCKAALSA 554 C+ICL +PV CGH YC CI ++ + + RQ+ CP C+A Sbjct: 16 CSICLSLMTNPVSINCGHSYCHLCITDFFK-------NPSQKQLRQETFCCPQCRAPFHM 68 Query: 555 DSLVP 569 DSL P Sbjct: 69 DSLRP 73
>PEX10_PICPA (Q92265) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PAS7) Length = 419 Score = 43.1 bits (100), Expect = 6e-04 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C +CL + +P CGH +CW CI +W + Sbjct: 295 SRQCMLCLSYMTNPTAANCGHCFCWSCIIDWCK 327
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 42.7 bits (99), Expect = 8e-04 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C+IC D PV+T CGH +C CI E+L + +CP+C A L + L Sbjct: 32 CHICKDMLQTPVLTQCGHTFCSLCIREYL-------------NKESRCPLCLAELRQNML 78
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C++CL++ +PV+ CGH +C CI W ++ CPVC+ SL Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRW----------WEDLERDFPCPVCRKTSRYRSL 78 Query: 564 VP 569 P Sbjct: 79 RP 80
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C++CL++ +PV+ CGH +C CI W ++ CPVC+ SL Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRW----------WEDLERDFPCPVCRKTSRYRSL 78 Query: 564 VP 569 P Sbjct: 79 RP 80
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C++CL++ +PV+ CGH +C CI W ++ CPVC+ SL Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRW----------WEDLERDFPCPVCRKTSRYRSL 78 Query: 564 VP 569 P Sbjct: 79 RP 80
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/95 (25%), Positives = 42/95 (44%) Frame = +3 Query: 279 MAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCI 458 + + T SV D + ++ A G FDC IC+ + ++T C H++C CI Sbjct: 601 LRSFTTSTSVEDVTDKPELLQKLVAALQDGE-DFDCPICISPPTNIIITRCAHIFCRACI 659 Query: 459 YEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 + L+ S + CP+C+ +L+ L Sbjct: 660 LQTLQRS------------KPLCPLCRGSLTQSDL 682
>TRI17_RAT (Q9WV59) Tripartite motif protein 17 (Testis RING finger protein)| Length = 477 Score = 42.0 bits (97), Expect = 0.001 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C+ICLD+ DPV+T CGH +C CI Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECI 40
>TRI17_HUMAN (Q9Y577) Tripartite motif protein 17 (Testis RING finger protein)| (RING finger protein 16) Length = 477 Score = 42.0 bits (97), Expect = 0.001 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C+ICLD+ DPV+T CGH +C CI Sbjct: 16 CSICLDYFTDPVMTTCGHNFCRACI 40
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 F C +CLDF +P + CGH YC CI L + ++CP+C+A Sbjct: 6 FCCAVCLDFFVEPCIIECGHSYCRFCIESHL-------------NINEKCPLCRA 47
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVC 536 C+IC +F P++T CGH +C CI +L T+ Q+CP C Sbjct: 28 CHICKEFFTAPMITGCGHTFCSLCIQRYL------------TNTSQRCPTC 66
>TRI43_HUMAN (Q96BQ3) Tripartite motif protein 43| Length = 446 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 C ICL++ DPV CGH +C PC+ S + + CP C+ Sbjct: 15 CVICLNYLVDPVTICCGHSFCRPCL----------CLSWEEAQSPANCPACR 56
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ +P+ CGH +C CI ++ SV+ + CPVC+ +L Sbjct: 15 CPICLELLTEPLSLDCGHSFCQACITAKIKESVII------SRGESSCPVCQTRFQPGNL 68 Query: 564 VP 569 P Sbjct: 69 RP 70
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50| Length = 487 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ +P++ CGH YC C+ + + A +CPVC+ A+ S Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKGCL----------VSLSCHLDAELRCPVCRQAVDGSSS 65 Query: 564 VP 569 +P Sbjct: 66 LP 67
>TRI11_MOUSE (Q99PQ2) Tripartite motif protein 11 (EC 6.3.2.-)| Length = 467 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE-WLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C ICLD+ DPV+T CGH +C CI W +P A CP C+ + + Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYA-----------CPECRELSAQRN 64 Query: 561 LVP 569 L P Sbjct: 65 LRP 67
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of| interleukin 2 receptor) Length = 496 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ +PV C H +C CI ++ S NT + CPVC+ +L Sbjct: 15 CPICLELLKEPVSADCNHSFCRACI-------TLNYESNRNTDGKGNCPVCRVPYPFGNL 67 Query: 564 VP 569 P Sbjct: 68 RP 69
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ +P+ CGH +C CI R SV+ + CPVC+ + +L Sbjct: 15 CPICLELLTEPLSIDCGHSFCQACITPNGRESVI------GQEGERSCPVCQTSYQPGNL 68 Query: 564 VP 569 P Sbjct: 69 RP 70
>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting| protein) (RING finger protein 90) Length = 511 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = +3 Query: 342 EMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYE-WLRPSVVSATSGDNTSA- 515 E A A G C+ICL+ +PV CGH +C CI W RP S + Sbjct: 15 EALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPF 74 Query: 516 RQQCPVCKAALSADSLVP 569 CP C+ L P Sbjct: 75 PLPCPQCREPARPSQLRP 92
>TRIM1_MOUSE (Q9QUS6) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| Length = 685 Score = 40.4 bits (93), Expect = 0.004 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C ICL+ DP++ C H C+ C + L S S S + +A QCP C+ +S Sbjct: 10 CPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITA-FQCPTCRYVIS 64
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNEITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II| Length = 269 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/65 (32%), Positives = 32/65 (49%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSAD 557 + C ICLD + T CGH++C CI L T+A Q+CPVC+ + + Sbjct: 204 YKCVICLDSPENLSCTPCGHIFCNFCILSAL----------GTTAATQKCPVCRRKVHPN 253 Query: 558 SLVPL 572 ++ L Sbjct: 254 KVICL 258
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVC 536 C+IC DF +PV+T CGH +C CI +L S +CP+C Sbjct: 27 CHICKDFLKNPVLTPCGHTFCSLCIRGYL-------------SNEPKCPLC 64
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 C IC +F PV+T C H +C CI E+L CP+CKA Sbjct: 36 CYICKEFLKAPVITSCNHTFCSHCIREYL-------------IVNSHCPLCKA 75
>TRI11_HUMAN (Q96F44) Tripartite motif protein 11 (EC 6.3.2.-) (RING finger| protein 92) (BIA1 protein) Length = 468 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE-WLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C ICLD+ DPV+T CGH +C CI W +P A CP C+ + Sbjct: 16 CAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYA-----------CPECRELSPQRN 64 Query: 561 LVP 569 L P Sbjct: 65 LRP 67
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTQCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNEITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>TRIM1_HUMAN (Q9UJV3) Midline-2 (Midline defect 2) (Tripartite motif protein 1)| (Midin-2) (RING finger protein 60) Length = 715 Score = 40.4 bits (93), Expect = 0.004 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C ICL+ DP++ C H C+ C + L S S S + +A QCP C+ +S Sbjct: 10 CPICLELFEDPLLLPCAHSLCFSCAHRILVSSCSSGESIEPITA-FQCPTCRYVIS 64
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCRFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQKKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ +PV T C H++C C+ + L + QCP+CK ++ S Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLL----------NQRKGPSQCPLCKNDITKRS 72 Query: 561 L 563 L Sbjct: 73 L 73
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 39.7 bits (91), Expect = 0.006 Identities = 20/62 (32%), Positives = 27/62 (43%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ +P+ CGH +C CI SV R CPVC+ + +L Sbjct: 15 CPICLELLTEPLSIDCGHSFCQVCIIGNSNNSVF------GQGGRSSCPVCRTSYQPGNL 68 Query: 564 VP 569 P Sbjct: 69 RP 70
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 39.7 bits (91), Expect = 0.006 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 +F C++C DF P++T C H +C CI L S +CP+C+A Sbjct: 31 AFRCHVCKDFYDSPMLTSCNHTFCSLCIRRCL-------------SVDSKCPLCRA 73
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 39.7 bits (91), Expect = 0.006 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C IC+ D +T CGH +C+ CI LR + CP C L+ + L Sbjct: 52 CPICMQIIKDAFLTACGHSFCYMCIITHLR-------------NKSDCPCCSQHLTNNQL 98 Query: 564 VP 569 P Sbjct: 99 YP 100
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 39.3 bits (90), Expect = 0.008 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAA 545 S C +C DF +PV+T C H +C CI L S +CP C+++ Sbjct: 27 SLRCQVCKDFFDNPVITSCSHTFCSLCIRRCL-------------STEGKCPACRSS 70
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 39.3 bits (90), Expect = 0.008 Identities = 20/64 (31%), Positives = 27/64 (42%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSAD 557 F C IC+ D +T CGH +C+ CI LR + CP C L+ Sbjct: 45 FLCPICMQIIKDAFLTACGHSFCYMCIITHLR-------------NKSDCPCCGHYLTNS 91 Query: 558 SLVP 569 +L P Sbjct: 92 NLFP 95
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 39.3 bits (90), Expect = 0.008 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +3 Query: 369 SGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 S F C IC D + +T CGH +C+ CI++ L DN +CP C + Sbjct: 131 SNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLE---------DN----NRCPKCNYVV 177 Query: 549 -SADSLVP 569 + D L P Sbjct: 178 DNIDHLYP 185
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 39.3 bits (90), Expect = 0.008 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +3 Query: 369 SGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 S F C IC D + +T CGH +C+ CI++ L DN +CP C + Sbjct: 133 SNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLE---------DN----NRCPKCNYVV 179 Query: 549 -SADSLVP 569 + D L P Sbjct: 180 DNIDHLYP 187
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 39.3 bits (90), Expect = 0.008 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAA 545 S C +C DF +PV+T C H +C CI L S +CP C+++ Sbjct: 27 SLRCQVCKDFFDNPVITSCSHTFCSLCIRRCL-------------STEGKCPTCRSS 70
>TRI31_HUMAN (Q9BZY9) Tripartite motif protein 31| Length = 425 Score = 39.3 bits (90), Expect = 0.008 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICLD PV CGH +C CI + G+ + +CP+CK ++ +++ Sbjct: 16 CPICLDILQKPVTIDCGHNFCLKCITQ----------IGETSCGFFKCPLCKTSVRKNAI 65
>TRI50_RAT (Q810I1) Tripartite motif protein 50| Length = 483 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ +P++ CGH YC C+ + ++ + +CPVC+ ++ S Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKNCL----------DSLSEHLDSELRCPVCRQSVDCSSS 65 Query: 564 VP 569 P Sbjct: 66 PP 67
>RAD16_YEAST (P31244) DNA repair protein RAD16 (EC 3.6.1.-) (ATP-dependent| helicase RAD16) Length = 790 Score = 39.3 bits (90), Expect = 0.008 Identities = 22/62 (35%), Positives = 30/62 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C +C D A +P+ + C H +C CI E+ V S +N + CPVC LS D Sbjct: 537 CQLCNDEAEEPIESKCHHKFCRLCIKEY----VESFMENNN---KLTCPVCHIGLSIDLS 589 Query: 564 VP 569 P Sbjct: 590 QP 591
>TRI50_PIG (Q865W2) Tripartite motif protein 50| Length = 486 Score = 38.9 bits (89), Expect = 0.011 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C +CL+ +P++ CGH YC C+ R + + +CPVC+ + + S Sbjct: 16 CPVCLEVFKEPLMLQCGHSYCKGCLLSLSR----------HLDSELRCPVCRQEVDSSSS 65 Query: 564 VP 569 P Sbjct: 66 PP 67
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 38.9 bits (89), Expect = 0.011 Identities = 17/64 (26%), Positives = 30/64 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C++C D +T+CGH++C C E L + ++CP C SA+ L Sbjct: 639 CSVCSKNWKDTAITVCGHVFCLGCTQERL------------AARLRRCPTCNKGFSANDL 686 Query: 564 VPLY 575 + ++ Sbjct: 687 LSIH 690
>TRI49_HUMAN (Q9NS80) Tripartite motif protein 49 (RING finger protein 18)| (Testis-specific ring-finger protein) Length = 452 Score = 38.9 bits (89), Expect = 0.011 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 372 GSFDCNICLDFAADPVVTLCGHLYCWPCIY 461 G C +C+++ DPV CGH +C PC Y Sbjct: 11 GELICPLCMNYFIDPVTIDCGHSFCRPCFY 40
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 38.5 bits (88), Expect = 0.014 Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = +3 Query: 384 CNIC-LDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C++C + D +++LCGH +C+ CI + + + +++CP+C A Sbjct: 627 CSVCNFERWKDRIISLCGHGFCYQCIQKRIE------------TRQRRCPICGRGFGASD 674 Query: 561 LVPLY 575 ++P++ Sbjct: 675 VIPIH 679
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 38.5 bits (88), Expect = 0.014 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = +3 Query: 381 DCNICLDFAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 DC ICLD AA TL C H +C CI W T CP+C A +++ Sbjct: 45 DCPICLDVAATEAQTLPCMHKFCLDCIQRW-------------TLTSTACPLCNARVTS 90
>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)| Length = 861 Score = 38.5 bits (88), Expect = 0.014 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C IC + A D + + C H +C C+ E++ +A G+N + CP C LS D Sbjct: 609 CKICDEVAQDAIESRCHHTFCRLCVTEYIN----AAGDGENVN----CPSCFIPLSIDLS 660 Query: 564 VP 569 P Sbjct: 661 AP 662
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 38.5 bits (88), Expect = 0.014 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C HL+C CI +R Sbjct: 286 SISCQICEHILADPVETTCRHLFCRTCILSCIR 318
>TRI48_HUMAN (Q8IWZ4) Tripartite motif protein 48 (RING finger protein 101)| Length = 375 Score = 38.5 bits (88), Expect = 0.014 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIY 461 C IC+++ DPV CGH +C PC Y Sbjct: 15 CPICMNYFIDPVTIDCGHSFCRPCFY 40
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 38.1 bits (87), Expect = 0.019 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 + C IC + ++TLCGH++C PC+++ + S G C +C++ Sbjct: 204 YRCPICFEPPETALMTLCGHVFCCPCLFQMVNSSRTCRQFG-------HCALCRS 251
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 38.1 bits (87), Expect = 0.019 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C+IC DF V+T CGH +C CI ++L+ +CP+C + L+ L Sbjct: 32 CHICKDFLKASVLTPCGHSFCSICIRKYLQ-------------KESKCPLCLSDLTESML 78
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 38.1 bits (87), Expect = 0.019 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 F C +CL+ P+V CGHL C+ C+++ + N CP+C+ Sbjct: 24 FLCCVCLELLYKPIVLSCGHLSCFWCVHKSM-----------NGFRESHCPICR 66 Score = 36.2 bits (82), Expect = 0.070 Identities = 23/77 (29%), Positives = 30/77 (38%) Frame = +3 Query: 306 VSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVV 485 + DNK+ K IS + C+ C + PVV CGH+YC C VV Sbjct: 176 LKDNKVSKQISKD----------DLLCSACKELLVRPVVLNCGHVYCEGC--------VV 217 Query: 486 SATSGDNTSARQQCPVC 536 Q+C VC Sbjct: 218 DMAEESEKIKCQECNVC 234
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 38.1 bits (87), Expect = 0.019 Identities = 17/64 (26%), Positives = 30/64 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C++C D +T+CGH++C C E L + ++CP C SA+ L Sbjct: 629 CSVCSKNWKDTAITVCGHVFCSKCTQERL------------AARLRRCPSCNRGFSANDL 676 Query: 564 VPLY 575 + ++ Sbjct: 677 LSIH 680
>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)| Length = 610 Score = 37.7 bits (86), Expect = 0.024 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 21/122 (17%) Frame = +3 Query: 249 MEGGGMDQVCMAAMTNQPSVSDNKLMKNISGEMP-------------ATATAGS----GS 377 +E G DQ M T QP D+K + E P A+ TA S G Sbjct: 83 VETNGTDQEEMTEPTEQP---DSKTPQKRKLEEPEPEPKKAKVEDKDASKTAASLGAAGD 139 Query: 378 F----DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAA 545 F C +C++ DPV+ CGH +C CI + G ++ A CP CK + Sbjct: 140 FAEELTCPLCVELFKDPVMVACGHNFCRSCIDK--------VWEGQSSFA---CPECKES 188 Query: 546 LS 551 ++ Sbjct: 189 IT 190
>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) Length = 470 Score = 37.7 bits (86), Expect = 0.024 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C+ICLD +P+ CGH +C CI+E V G + CP C+ +L Sbjct: 20 CSICLDPMVEPMSIECGHCFCKECIFE------VGKNGGSS------CPECRQQFLLRNL 67 Query: 564 VP 569 P Sbjct: 68 RP 69
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 37.7 bits (86), Expect = 0.024 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 +C ICL+ D V+T C H C C+ R ++TSG CPVC+ +S Sbjct: 793 ECPICLEALEDAVLTPCAHRLCRECLLASWR----NSTSG-------LCPVCRNTVSKQE 841 Query: 561 LV 566 L+ Sbjct: 842 LI 843
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50| Length = 483 Score = 37.4 bits (85), Expect = 0.032 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQ----CPVCKAALS 551 C ICL+ +P++ CGH YC C+ DN S CPVC+ ++ Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKDCL--------------DNLSQHLDSELCCPVCRQSVD 61 Query: 552 ADSLVP 569 S P Sbjct: 62 CSSSPP 67
>NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) (m-neu1)| Length = 574 Score = 37.4 bits (85), Expect = 0.032 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 342 EMPATATAGSGSFDCNICLDFAADPVVTLCGHL-YCWPC 455 E P T G S +C IC + A D V+ CGH+ C+ C Sbjct: 507 ESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYSC 545
>NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) (h-neu) (RING| finger protein 67) Length = 574 Score = 37.4 bits (85), Expect = 0.032 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 342 EMPATATAGSGSFDCNICLDFAADPVVTLCGHL-YCWPC 455 E P T G S +C IC + A D V+ CGH+ C+ C Sbjct: 507 ESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYAC 545
>TRI18_HUMAN (O15344) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Putative transcription factor XPRF) (Midin) (RING finger protein 59) (Midline 1 RING finger protein) Length = 667 Score = 37.4 bits (85), Expect = 0.032 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C ICL+ DP++ C H C+ C + L + S ++ +A QCP C+ ++ Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITA-FQCPTCRHVIT 64
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 37.0 bits (84), Expect = 0.041 Identities = 22/60 (36%), Positives = 26/60 (43%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C IC D PV T C H YC CI E+L DN +CP+CK + L Sbjct: 29 CYICKDLLNAPVRTQCDHTYCSQCIREFL--------LRDN-----RCPLCKTEVFESGL 75
>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) (RING finger protein 147) Length = 630 Score = 37.0 bits (84), Expect = 0.041 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE-WLRPSVVSATSGDNTSARQQCPVCKAALSA 554 C+ICL+ +PV T CGH +C C+ E W A G + CP C+A A Sbjct: 13 CSICLEPFKEPVTTPCGHNFCGSCLNETW-------AVQG----SPYLCPQCRAVYQA 59
>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 37.0 bits (84), Expect = 0.041 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 F C+ C D +P CGH +C C+ W +S + +CP C+ Sbjct: 32 FSCHCCYDILVNPTTLNCGHSFCRHCLALWWA-----------SSKKTECPECR 74
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 37.0 bits (84), Expect = 0.041 Identities = 16/62 (25%), Positives = 28/62 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ P+ CGH +C C+ + S++ CPVC+ + +++ Sbjct: 15 CPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-------KGESSCPVCRISYQPENI 67 Query: 564 VP 569 P Sbjct: 68 RP 69
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 37.0 bits (84), Expect = 0.041 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C HL+C CI L+ Sbjct: 287 SISCQICEHILADPVETSCKHLFCRICILRCLK 319
>CM007_PONPY (Q5RD97) Protein C13orf7 homolog| Length = 726 Score = 37.0 bits (84), Expect = 0.041 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C+ICL PV+ + H++C CI WL+ + QCP C+ ++ ++ Sbjct: 18 CHICLGKVRQPVICINNHVFCSICIDLWLKNN-------------SQCPACRVPITPEN 63
>CM007_HUMAN (Q5W0B1) Protein C13orf7| Length = 726 Score = 37.0 bits (84), Expect = 0.041 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C+ICL PV+ + H++C CI WL+ + QCP C+ ++ ++ Sbjct: 18 CHICLGKVRQPVICINNHVFCSICIDLWLKNN-------------SQCPACRVPITPEN 63
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 36.6 bits (83), Expect = 0.054 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVV-------TLCGHLYCWPCIYEWLRPSVVSATSGDNT 509 AT SG+ C IC+D ++ V T CGH++C C LR S+ +A + Sbjct: 121 ATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQC----LRDSLKNANT---- 172 Query: 510 SARQQCPVCKAALSADSLVPLY 575 CP C+ ++ P+Y Sbjct: 173 -----CPTCRKKINHKRYHPIY 189
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 36.6 bits (83), Expect = 0.054 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C+IC DF PV+T CGH +C CI Sbjct: 28 CHICKDFLKVPVLTPCGHTFCSLCI 52
>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)| Length = 609 Score = 36.6 bits (83), Expect = 0.054 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +3 Query: 351 ATATAGSGSF----DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSAR 518 A++ +G F C +C++ DPV+ CGH +C CI + A G ++ A Sbjct: 130 ASSLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDK--------AWEGQSSFA- 180 Query: 519 QQCPVCKAALS 551 CP C+ +++ Sbjct: 181 --CPECRESIT 189
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 36.6 bits (83), Expect = 0.054 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = +3 Query: 375 SFDCNICLDFAADPV----VTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 SF+C IC +P+ +T C H +C PC+ E++ N CP C+ Sbjct: 855 SFECAICTTECIEPLSAVSITECLHTFCEPCLAEYIE-------FQQNKKLSINCPYCRM 907 Query: 543 ALSADSLVPL 572 +S +++ L Sbjct: 908 PISEANVLKL 917
>ATL4D_ARATH (Q9M0R4) Putative RING-H2 finger protein ATL4D precursor| Length = 357 Score = 36.6 bits (83), Expect = 0.054 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Frame = +3 Query: 366 GSGSFDCNICLDFAADPV----VTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPV 533 G+G +C ICL D + C H + CI EWL S+R CPV Sbjct: 114 GNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWL-------------SSRSTCPV 160 Query: 534 CKAALSADS 560 C+A LS S Sbjct: 161 CRANLSLKS 169
>TRI34_HUMAN (Q9BYJ4) Tripartite motif protein 34 (Interferon-responsive finger| protein 1) (RING finger protein 21) Length = 488 Score = 36.6 bits (83), Expect = 0.054 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ +P+ CGH C CI +V + + + + CPVC + S + L Sbjct: 15 CPICLELLTEPLSLDCGHSLCRACI------TVSNKEAVTSMGGKSSCPVCGISYSFEHL 68
>LNX1_MOUSE (O70263) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-binding protein 1) (Ligand of Numb-protein X 1) Length = 728 Score = 36.6 bits (83), Expect = 0.054 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C+ICL DP+ T CGH YC C+ +L Sbjct: 45 CHICLQALLDPLDTPCGHTYCTLCLTNFL 73
>LNX1_HUMAN (Q8TBB1) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-protein X 1) Length = 728 Score = 36.6 bits (83), Expect = 0.054 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C+ICL DP+ T CGH YC C+ +L Sbjct: 41 CHICLQALLDPLDTPCGHTYCTLCLTNFL 69
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 36.6 bits (83), Expect = 0.054 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVV-------TLCGHLYCWPCIYEWLRPSVVSATSGDNT 509 AT SG+ C IC+D ++ V T CGH++C C LR S+ +A + Sbjct: 125 ATGPRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQC----LRDSLKNANT---- 176 Query: 510 SARQQCPVCKAALSADSLVPLY 575 CP C+ ++ P+Y Sbjct: 177 -----CPTCRKKINHKRYHPIY 193
>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)| Length = 964 Score = 36.2 bits (82), Expect = 0.070 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = +3 Query: 378 FDCNICLDFAADP-VVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 F C IC++ D + C L C+ CI WL T R QCP C+A L Sbjct: 13 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWL------------TEQRAQCPHCRAPLQL 60 Query: 555 DSLV 566 LV Sbjct: 61 RELV 64
>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of| Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1066 Score = 36.2 bits (82), Expect = 0.070 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPV-CKAALSADS 560 C +C DP+ T CGH++C C+ W VV S CP C+ LSA Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPW----VVQEGS---------CPARCRGRLSAKE 64 Query: 561 L 563 L Sbjct: 65 L 65
>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37| Length = 961 Score = 36.2 bits (82), Expect = 0.070 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = +3 Query: 378 FDCNICLDFAADP-VVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 F C IC++ D + C L C+ CI WL T R QCP C+A L Sbjct: 13 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWL------------TEQRAQCPHCRAPLQL 60 Query: 555 DSLV 566 LV Sbjct: 61 RELV 64
>NEUR_DROME (P29503) Protein neuralized| Length = 754 Score = 36.2 bits (82), Expect = 0.070 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = +3 Query: 288 MTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHL-YCWPCIYE 464 + N + + NK ++S + ++A +C IC + D V+ +CGH+ C+ C E Sbjct: 674 IANSTNNAANKWKDSLSDQQSTDSSA-----ECTICYENPIDSVLYMCGHMCMCYDCAIE 728 Query: 465 WLRPSVVSATSGDNTSARQQCPVCKAAL 548 R G QCP+C+A + Sbjct: 729 QWR-----GVGGG------QCPLCRAVI 745
>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator| Length = 450 Score = 36.2 bits (82), Expect = 0.070 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 F C+ C D +P CGH +C C+ W +S + +CP C+ Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALWWM-----------SSKKTECPECR 74
>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator| Length = 450 Score = 36.2 bits (82), Expect = 0.070 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 F C+ C D +P CGH +C C+ W +S + +CP C+ Sbjct: 32 FSCHCCYDTLVNPTTLNCGHSFCRHCLALWWM-----------SSKKTECPECR 74
>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)| (Estrogen-responsive finger protein) (Efp) Length = 634 Score = 36.2 bits (82), Expect = 0.070 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE 464 C++CL+ +PV T CGH +C C+ E Sbjct: 13 CSVCLELFKEPVTTPCGHNFCTSCLDE 39
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1063 Score = 36.2 bits (82), Expect = 0.070 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPV-CKAALSADS 560 C +C DP+ T CGH++C C+ W VV S CP C+ LSA Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPW----VVQEGS---------CPARCRGRLSAKE 64 Query: 561 L 563 L Sbjct: 65 L 65
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 36.2 bits (82), Expect = 0.070 Identities = 19/73 (26%), Positives = 29/73 (39%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCP 530 A+ T+ + +C IC +PV CGH +C C+ + G + CP Sbjct: 5 ASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCE------IPGPDLEESPTCP 58 Query: 531 VCKAALSADSLVP 569 +CK S P Sbjct: 59 LCKEPFRPGSFRP 71
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 36.2 bits (82), Expect = 0.070 Identities = 19/73 (26%), Positives = 29/73 (39%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCP 530 A+ T+ + +C IC +PV CGH +C C+ + G + CP Sbjct: 5 ASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCE------IPGPDLEESPTCP 58 Query: 531 VCKAALSADSLVP 569 +CK S P Sbjct: 59 LCKEPFRPGSFRP 71
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 36.2 bits (82), Expect = 0.070 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C+ICL PVV H++C CI WL+ + QCP C+ ++ ++ Sbjct: 18 CHICLGKVRQPVVCTNNHVFCSICIDLWLKNN-------------SQCPACRVPITPEN 63
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 36.2 bits (82), Expect = 0.070 Identities = 29/101 (28%), Positives = 39/101 (38%) Frame = +3 Query: 267 DQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYC 446 D V +A T S S M+ I G ++C ICL + V T CGH +C Sbjct: 34 DSVSGSASTGNLSSS---FMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFC 90 Query: 447 WPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSLVP 569 CI + +R A +CPV L + L P Sbjct: 91 KACIIKSIR------------DAGHKCPVDNEILLENQLFP 119
>FANCL_HUMAN (Q9NW38) Ubiquitin ligase protein FANCL (EC 6.3.2.-) (Fanconi| anemia group L protein) (Fanconi anemia-associated polypeptide of 43 kDa) (FAAP43) Length = 375 Score = 36.2 bits (82), Expect = 0.070 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 13/93 (13%) Frame = +3 Query: 312 DNKLMKNISG----EMPATATAGSGSF--DCNICLDFAADPVV-------TLCGHLYCWP 452 +N +++N+ + PA A F DC IC + D + + CG + Sbjct: 277 ENSVLQNLKDVLEIDFPARAILEKSDFTMDCGICYAYQLDGTIPDQVCDNSQCGQPFHQI 336 Query: 453 CIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C+YEWLR + S S + +CP C ++ Sbjct: 337 CLYEWLRGLLTSRQSFNIIFG--ECPYCSKPIT 367
>TRIM4_HUMAN (Q9C037) Tripartite motif protein 4 (RING finger protein 87)| Length = 500 Score = 35.8 bits (81), Expect = 0.092 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIY 461 C ICLD+ DPV CGH +C C++ Sbjct: 12 CPICLDYFQDPVSIECGHNFCRGCLH 37
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 35.8 bits (81), Expect = 0.092 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 C ICLD P + C H +C+PC+ + D +CP C+A Sbjct: 43 CPICLDRYKQPKLLPCQHTFCYPCL----------ESCADTLHRNLKCPECRA 85
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell| death-related protein SPL11) Length = 694 Score = 35.8 bits (81), Expect = 0.092 Identities = 21/66 (31%), Positives = 29/66 (43%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSAD 557 F C I L+ DPV+ G Y CI +W+ SG +T CP + +S Sbjct: 277 FRCPISLELMKDPVIVSTGQTYERACIEKWI-------ASGHHT-----CPTTQQKMSTS 324 Query: 558 SLVPLY 575 +L P Y Sbjct: 325 ALTPNY 330
>RO52_HUMAN (P19474) 52 kDa Ro protein (Sjoegren syndrome type A antigen)| (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen Ro/SS-A) (Tripartite motif protein 21) (RING finger protein 81) Length = 475 Score = 35.8 bits (81), Expect = 0.092 Identities = 22/62 (35%), Positives = 26/62 (41%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICLD +PV CGH +C CI S V G CPVC+ +L Sbjct: 16 CPICLDPFVEPVSIECGHSFCQECI------SQVGKGGG------SVCPVCRQRFLLKNL 63 Query: 564 VP 569 P Sbjct: 64 RP 65
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 35.8 bits (81), Expect = 0.092 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C H++C CI L+ Sbjct: 290 SISCQICEHILADPVETSCKHVFCRICILRCLK 322
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 35.8 bits (81), Expect = 0.092 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C H++C CI L+ Sbjct: 290 SISCQICEHILADPVETNCKHVFCRVCILRCLK 322
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 35.8 bits (81), Expect = 0.092 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +3 Query: 357 ATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEW 467 A A + +C +C +P+ T CGH++C C+ W Sbjct: 9 AEAVDPALECKLCGQVLEEPLCTPCGHVFCASCLLPW 45
>TRI52_HUMAN (Q96A61) Tripartite motif protein 52 (RING finger protein 102)| Length = 297 Score = 35.8 bits (81), Expect = 0.092 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICLD+ DPV CGH +C C+ Sbjct: 20 CAICLDYFKDPVSISCGHNFCRGCV 44
>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) (AIP37) (ActA-interacting protein 37) (LaXp180) Length = 488 Score = 35.8 bits (81), Expect = 0.092 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 C IC ++ + V C H +C CI EW++ V +CP+C+ Sbjct: 406 CIICSEYFIEAVTLNCAHSFCSFCINEWMKRKV-------------ECPICR 444
>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) (RING finger protein 57) Length = 474 Score = 35.8 bits (81), Expect = 0.092 Identities = 18/64 (28%), Positives = 24/64 (37%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 351 CKICAESNKDVKIEPCGHLLCSCCLAAW------------QHSDSQTCPFCRCEIKGWEA 398 Query: 564 VPLY 575 V +Y Sbjct: 399 VSIY 402
>TRI18_MUSSP (P82457) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 35.8 bits (81), Expect = 0.092 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C ICL+ DP++ C H C+ C + L + ++ +A QCP C+ ++ Sbjct: 10 CPICLELLEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINA-FQCPTCRHVIT 64
>RAG1_RABIT (P34088) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1042 Score = 35.8 bits (81), Expect = 0.092 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C IC ADPV T C H++C CI L+ Sbjct: 289 SISCQICEHILADPVETSCKHVFCRICILRCLK 321
>ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precursor| Length = 327 Score = 35.8 bits (81), Expect = 0.092 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +3 Query: 366 GSGSFDCNICL-DFAADPVVTL---CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPV 533 G G +C ICL +F + + L C H + CI WL S+R CPV Sbjct: 122 GKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWL-------------SSRSTCPV 168 Query: 534 CKAAL 548 C+A+L Sbjct: 169 CRASL 173
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 35.8 bits (81), Expect = 0.092 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 +C IC+D AD ++ C H +C CI +W SG + + CPVC+ ++A Sbjct: 146 ECCICMDGKADLILP-CAHSFCQKCIDKW---------SGQS----RNCPVCRIQVTA 189
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 35.8 bits (81), Expect = 0.092 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 C IC ++ + V C H +C CI EW++ + +CP+C+ Sbjct: 403 CIICSEYFIEAVTLNCAHSFCSYCINEWMKRKI-------------ECPICR 441
>TRI18_MOUSE (O70583) Midline-1 (EC 6.3.2.-) (Tripartite motif protein 18)| (Midin) Length = 680 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C ICL+ DP++ C H C+ C + L + ++ +A QCP C+ ++ Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINA-FQCPTCRHVIT 64
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 35.4 bits (80), Expect = 0.12 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Frame = +3 Query: 345 MPATATAGSGSFD-----CNICLDFAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSGDN 506 M GSG+ D C IC+ +D T+ C H +C+ CI W Sbjct: 1 MDTILAGGSGTSDASDNTCTICMSTVSDLGKTMPCLHDFCFVCIRAW------------- 47 Query: 507 TSARQQCPVCKAALSA 554 TS QCP+C+ + + Sbjct: 48 TSTSVQCPLCRCPVQS 63
>TRI41_HUMAN (Q8WV44) Tripartite motif protein 41| Length = 630 Score = 35.4 bits (80), Expect = 0.12 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI 458 C ICLD+ DPV CGH +C C+ Sbjct: 20 CAICLDYFTDPVSIGCGHNFCRVCV 44
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/64 (31%), Positives = 28/64 (43%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSAD 557 ++C ICL + V T CGH +C CI + +R A +CPV L + Sbjct: 68 YECPICLMALREAVQTPCGHRFCKACIIKSIR------------DAGHKCPVDNEILLEN 115 Query: 558 SLVP 569 L P Sbjct: 116 QLFP 119
>ATL4O_ARATH (Q8W571) RING-H2 finger protein ATL4O precursor| Length = 322 Score = 35.4 bits (80), Expect = 0.12 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = +3 Query: 366 GSGSFDCNICLDFAADP----VVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPV 533 GS +C ICL+ D ++ +C HL+ CI WL + CPV Sbjct: 117 GSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWL-------------YSHATCPV 163 Query: 534 CKAALSADSLVP 569 C++ L+A S P Sbjct: 164 CRSNLTAKSNKP 175
>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin| cytoplasmic domain-associated protein 3) (SEMACAP3 protein) Length = 1062 Score = 35.4 bits (80), Expect = 0.12 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWL 470 C +C DP+ T CGH++C C+ W+ Sbjct: 18 CALCHKVLEDPLTTPCGHVFCAGCVLPWV 46
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNT 509 F C IC P+VT CGH +C C + R + A G T Sbjct: 251 FACIICKSSYKSPIVTKCGHYFCESCALQRYRKNPSCAACGAGT 294
>TRI18_RAT (P82458) Midline-1 (Tripartite motif protein 18)| Length = 667 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C ICL+ DP++ C H C+ C + L + ++ +A QCP C+ ++ Sbjct: 10 CPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINA-FQCPTCRHVIT 64
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 35.0 bits (79), Expect = 0.16 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C++C D V+ CGH++C C E L + ++CP C S++ L Sbjct: 591 CSLCSKNWKDTVIKTCGHVFCADCCKERL------------AARMRKCPTCNKGFSSNDL 638 Query: 564 VPLY 575 + ++ Sbjct: 639 LVVH 642
>ATL3A_ARATH (Q9SRQ8) RING-H2 finger protein ATL3A| Length = 356 Score = 35.0 bits (79), Expect = 0.16 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 4/91 (4%) Frame = +3 Query: 312 DNKLMKNISGEMPATATAGSGSFDCNICL-DFAADPVVTL---CGHLYCWPCIYEWLRPS 479 D L+K+I+ S DC++CL +F + + L C H + PCI WL+ Sbjct: 135 DESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK-- 192 Query: 480 VVSATSGDNTSARQQCPVCKAALSADSLVPL 572 + CP+C+A + S V + Sbjct: 193 -----------SHSNCPLCRAFIVTSSAVEI 212
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 35.0 bits (79), Expect = 0.16 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 S C +C +DPV T C HL+C CI ++++ Sbjct: 291 SVSCLVCEHILSDPVQTSCKHLFCRICILKYIK 323
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C ICLD + V T C HL+C C+ + + VS CPVC+ S Sbjct: 12 CPICLDPLKEAVSTDCRHLFCRMCLIRHMDKASVSGV--------LSCPVCRKPCS 59
>ATL3B_ARATH (Q8RXX9) RING-H2 finger protein ATL3B precursor (RING-H2 finger| protein ATL6) Length = 398 Score = 35.0 bits (79), Expect = 0.16 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Frame = +3 Query: 354 TATAGSGSFDCNICL-DFAADPVVTL---CGHLYCWPCIYEWLRPSVVSATSGDNTSARQ 521 T G G +C ICL +F D + L C H++ CI WL V Sbjct: 118 TQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVT------------ 165 Query: 522 QCPVCKAALS 551 CPVC+A L+ Sbjct: 166 -CPVCRANLA 174
>TRI45_HUMAN (Q9H8W5) Tripartite motif protein 45 (RING finger protein 99)| Length = 580 Score = 35.0 bits (79), Expect = 0.16 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 21/100 (21%) Frame = +3 Query: 306 VSDNK--LMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRP- 476 +S+N+ L+ +S TA SG C +CL P + C H C C+ E L P Sbjct: 1 MSENRKPLLGFVSKLTSGTALGNSGKTHCPLCLGLFKAPRLLPCLHTVCTTCL-EQLEPF 59 Query: 477 SVVSATSGDNTSARQ------------------QCPVCKA 542 SVV GD+ ++ + CPVC A Sbjct: 60 SVVDIRGGDSDTSSEGSIFQELKPRSLQSQIGILCPVCDA 99
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 35.0 bits (79), Expect = 0.16 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%) Frame = +3 Query: 354 TATAGSGSFDCNICLDFAADPVV-------TLCGHLYCWPCIYEWLRPSVVSATSGDNTS 512 T SG+ C IC+D ++ V T CGH++C C LR S+ +A + Sbjct: 126 TGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQC----LRDSLKNANT----- 176 Query: 513 ARQQCPVCKAALSADSLVPLY 575 CP C+ ++ P+Y Sbjct: 177 ----CPTCRKKINHKRYHPIY 193
>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24| Length = 405 Score = 34.7 bits (78), Expect = 0.21 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = +3 Query: 378 FDCNICLD-FAADPVVTLCGHLYCWPCIYEWLR--PSVVSATSGDN 506 F C IC ++ PVVT CGH +C C + R PS + SG N Sbjct: 308 FACIICRGPYSNSPVVTRCGHYFCEACALKRYRKDPSCAACGSGTN 353
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +3 Query: 309 SDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPC 455 S ++ +N+ + + T F C IC DPVVT C H +C C Sbjct: 239 SSSRTRENMLSDPEDSDTEDDIPFACLICRKAFTDPVVTRCAHYFCSSC 287
>ATL5H_ARATH (Q8LGA5) RING-H2 finger protein ATL5H precursor| Length = 368 Score = 34.7 bits (78), Expect = 0.21 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Frame = +3 Query: 354 TATAGSGSFDCNICL-DFAADPVVTL---CGHLYCWPCIYEWLRPSVVSATSGDNTSARQ 521 T G G+ +C ICL +F D + L C H++ CI WL+ V Sbjct: 114 TQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVT------------ 161 Query: 522 QCPVCKAALSADSLVP 569 CPVC+ L+ + P Sbjct: 162 -CPVCRTNLAEQTPEP 176
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 34.7 bits (78), Expect = 0.21 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = +3 Query: 300 PSVSDNKLMKNISGEMPATATAGSGSFDCNICLD-FAADPVVTLCGHLYCWPCIYEWLRP 476 P +KL + + PA A+ S C ICLD F + C H +C+ C+ EW Sbjct: 82 PKAGTSKLQQTV----PADASPDS---KCPICLDRFDNVSYLDRCLHKFCFRCVQEW--- 131 Query: 477 SVVSATSGDNTSARQQCPVCK 539 + + +CP+CK Sbjct: 132 ----------SKNKAECPLCK 142
>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ| domain-containing RING finger protein 1) Length = 690 Score = 34.7 bits (78), Expect = 0.21 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 C+ICL P+ T CGH +C+ C+ +L+ Sbjct: 50 CHICLQPLLQPLDTPCGHTFCYKCLRNFLQ 79
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNT 509 F C IC +P+VT CGH +C C + R + A G T Sbjct: 239 FACIICKKPYQNPIVTKCGHYFCESCALQRYRKNPSCAACGAGT 282
>ATL3G_ARATH (Q67YI6) RING-H2 finger protein ATL3G| Length = 411 Score = 34.7 bits (78), Expect = 0.21 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Frame = +3 Query: 336 SGEMPATATAGSGSFDCNICL-DFAADPVVT---LCGHLYCWPCIYEWLRPSVVSATSGD 503 +G+ T+ + DC +CL +F V LC H + CI EWLR Sbjct: 140 TGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLR---------- 189 Query: 504 NTSARQQCPVCKAAL--SADSLVPL 572 + CP+C+ A+ SA L P+ Sbjct: 190 ---SHPNCPLCRTAILGSAGVLTPM 211
>ARI1_DROME (Q94981) Protein ariadne-1 (Ari-1)| Length = 503 Score = 34.7 bits (78), Expect = 0.21 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +3 Query: 360 TAGSGSFDCNICLD-FAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSGDNTS-ARQQCP 530 T+ S +C IC D + L CGH +C PC +E+L +V+ G S A C Sbjct: 125 TSRSQCEECEICFSQLPPDSMAGLECGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCD 184 Query: 531 VCKAALSADSLV 566 + ++ +LV Sbjct: 185 ILVDDVTVANLV 196
>TRI10_MOUSE (Q9WUH5) Tripartite motif protein 10 (RING finger protein 9)| (Hematopoietic RING finger 1) Length = 489 Score = 34.7 bits (78), Expect = 0.21 Identities = 18/72 (25%), Positives = 28/72 (38%) Frame = +3 Query: 354 TATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPV 533 + T+ + +C IC +PV CGH +C C+ + G + CP+ Sbjct: 6 SVTSLADEVNCPICQGTLREPVTIDCGHNFCRGCLTRYCE------IPGPESEESLSCPL 59 Query: 534 CKAALSADSLVP 569 CK S P Sbjct: 60 CKEPFRPGSFRP 71
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 34.7 bits (78), Expect = 0.21 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = +3 Query: 300 PSVSDNKLMKNISGEMPATATAGSGSFDCNICLD-FAADPVVTLCGHLYCWPCIYEWLRP 476 P +KL + + PA A+ S C ICLD F + C H +C+ C+ EW Sbjct: 83 PKAGTSKLQQTV----PADASPDS---KCPICLDRFDNVSYLDRCLHKFCFRCVQEW--- 132 Query: 477 SVVSATSGDNTSARQQCPVCK 539 + + +CP+CK Sbjct: 133 ----------SKNKAECPLCK 143
>NEUR_DROVI (Q24746) Protein neuralized| Length = 747 Score = 34.7 bits (78), Expect = 0.21 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHL-YCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 S +C IC + D V+ +CGH+ C+ C E R G QCP+C+A + Sbjct: 691 SAECTICYENPIDSVLYMCGHMCMCYDCAIEQWR-----GVGGG------QCPLCRAVI 738
>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)| Length = 250 Score = 34.3 bits (77), Expect = 0.27 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ + ++ CGH YC C+ VS + +T R CP+C + S Sbjct: 16 CPICLEVFKESLMLQCGHSYCKGCL--------VSLSYHLDTKVR--CPMCWQVVDGSSS 65 Query: 564 VP 569 +P Sbjct: 66 LP 67
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)| Length = 250 Score = 34.3 bits (77), Expect = 0.27 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C ICL+ + ++ CGH YC C+ VS + +T R CP+C + S Sbjct: 16 CPICLEVFKESLMLQCGHSYCKGCL--------VSLSYHLDTKVR--CPMCWQVVDGSSS 65 Query: 564 VP 569 +P Sbjct: 66 LP 67
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 34.3 bits (77), Expect = 0.27 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 +C IC+D AD ++ C H +C CI +W + + CP+C+ ++ Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKW-------------SDRHRNCPICRLQMT 196
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 34.3 bits (77), Expect = 0.27 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 +C IC+D AD ++ C H +C CI +W + + CP+C+ ++ Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKW-------------SDRHRNCPICRLQMT 196
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 34.3 bits (77), Expect = 0.27 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 +C IC+D AD ++ C H +C CI +W + + CP+C+ ++ Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKW-------------SDRHRNCPICRLQMT 196
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 34.3 bits (77), Expect = 0.27 Identities = 15/57 (26%), Positives = 27/57 (47%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 +C IC+D AD ++ C H +C CI +W + + CP+C+ ++ Sbjct: 154 ECCICMDGRADLILP-CAHSFCQKCIDKW-------------SDRHRNCPICRLQMT 196
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 34.3 bits (77), Expect = 0.27 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPC 455 C +C DPV+T CGH +C C Sbjct: 55 CQLCCSVFKDPVITTCGHTFCRRC 78
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 34.3 bits (77), Expect = 0.27 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPC 455 C +C DPV+T CGH +C C Sbjct: 131 CQLCCSVFKDPVITTCGHTFCRRC 154
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 34.3 bits (77), Expect = 0.27 Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQ 524 P A GS C ICLD L C H +C CI WL R Sbjct: 3 PPAAAPELGS--CCICLDAITGAARALPCLHAFCLACIRRWL-------------EGRPT 47 Query: 525 CPVCKAALSA 554 CP+CKA + + Sbjct: 48 CPLCKAPVQS 57
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 34.3 bits (77), Expect = 0.27 Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQ 524 P A GS C ICLD L C H +C CI WL R Sbjct: 3 PPAAAPELGS--CCICLDAITGAARALPCLHAFCLACIRRWL-------------EGRPT 47 Query: 525 CPVCKAALSA 554 CP+CKA + + Sbjct: 48 CPLCKAPVQS 57
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 34.3 bits (77), Expect = 0.27 Identities = 16/55 (29%), Positives = 21/55 (38%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 379 CKICAENDKDVKIEPCGHLMCTSCLTSW------------QESEGQGCPFCRCEI 421
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1057 Score = 34.3 bits (77), Expect = 0.27 Identities = 24/85 (28%), Positives = 35/85 (41%) Frame = +3 Query: 312 DNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSA 491 D+ K I E+PA + C +C +DPV + C HL+C CI + + Sbjct: 275 DHLSTKLIPTEVPADLIR---AVTCQVCDHLLSDPVQSPCRHLFCRLCIIRY------TH 325 Query: 492 TSGDNTSARQQCPVCKAALSADSLV 566 G N CP C L+ L+ Sbjct: 326 ALGPN------CPTCNQHLNPSHLI 344
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 34.3 bits (77), Expect = 0.27 Identities = 16/55 (29%), Positives = 21/55 (38%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 381 CKICAENDKDVKIEPCGHLMCTSCLTSW------------QESEGQGCPFCRCEI 423
>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)| (Brain-expressed RING finger protein) Length = 744 Score = 34.3 bits (77), Expect = 0.27 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 C+ICLD P V C H +C C+ ++ P S CPVC+ Sbjct: 22 CSICLDRYRCPKVLPCLHTFCERCLQNYIPPQ----------SLTLSCPVCR 63
>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING| finger protein HAC1) Length = 744 Score = 34.3 bits (77), Expect = 0.27 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 C+ICLD P V C H +C C+ ++ P S CPVC+ Sbjct: 22 CSICLDRYRCPKVLPCLHTFCERCLQNYIPPQ----------SLTLSCPVCR 63
>ATL2A_ARATH (O22755) RING-H2 finger protein ATL2A (RING-H2 zinc finger protein| RHA3a) Length = 185 Score = 34.3 bits (77), Expect = 0.27 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = +3 Query: 336 SGEMPATATAGSG-SFDCNICLDFAADP----VVTLCGHLYCWPCIYEWLRPSVVSATSG 500 + E + A A G S +C ICL AD V+ LCGH + CI +WL Sbjct: 85 AAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWL---------- 134 Query: 501 DNTSARQQCPVCKAALS 551 +R CP C+ L+ Sbjct: 135 ---VSRSSCPSCRRILT 148
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 33.9 bits (76), Expect = 0.35 Identities = 17/64 (26%), Positives = 27/64 (42%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP C AA A Sbjct: 948 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 995 Query: 564 VPLY 575 +Y Sbjct: 996 HRIY 999
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 33.9 bits (76), Expect = 0.35 Identities = 17/64 (26%), Positives = 27/64 (42%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP C AA A Sbjct: 948 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 995 Query: 564 VPLY 575 +Y Sbjct: 996 HRIY 999
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 33.9 bits (76), Expect = 0.35 Identities = 17/64 (26%), Positives = 27/64 (42%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP C AA A Sbjct: 948 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 995 Query: 564 VPLY 575 +Y Sbjct: 996 HRIY 999
>CBLB_XENTR (Q6DFR2) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) Length = 982 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/55 (29%), Positives = 21/55 (38%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSW------------QESDGQGCPFCRCEI 426
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/55 (29%), Positives = 21/55 (38%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 386 CKICAENDKDVKIEPCGHLMCTSCLTSW------------QESDGQGCPFCRCEI 428
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 33.9 bits (76), Expect = 0.35 Identities = 20/87 (22%), Positives = 36/87 (41%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSAT 494 NK + N S E T C IC + + + CGHL+C C+ + + Sbjct: 632 NKALSNSSEEEEMLRTFAL----CTICRNNFKNTALKTCGHLFCNQCVDDRI-------- 679 Query: 495 SGDNTSARQQCPVCKAALSADSLVPLY 575 ++ ++CP C A ++P++ Sbjct: 680 ----SNRMRKCPTCSRAFDKMDVMPVH 702
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 33.9 bits (76), Expect = 0.35 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPC 455 F C +C + PVVT CGH +C C Sbjct: 197 FKCTLCKEDYKSPVVTNCGHYFCGSC 222
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 DC IC + DP+VT C H +C C + + S +CP+C+ Sbjct: 240 DCFICGNPFVDPIVTKCKHYFCTGCALKSFQKS-------------SKCPICQ 279
>PEX12_ARATH (Q9M841) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 372 Score = 33.9 bits (76), Expect = 0.35 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +3 Query: 384 CNICLDFAADP-VVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C +CL A+P VVT+ G ++C+ C+++++ S ++CPV S D Sbjct: 318 CALCLQKRANPSVVTVSGFVFCYSCVFKYV-------------SKYKRCPVTLIPASVDQ 364 Query: 561 LVPLY 575 + L+ Sbjct: 365 IRRLF 369
>RNF13_HUMAN (O43567) RING finger protein 13| Length = 381 Score = 33.9 bits (76), Expect = 0.35 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFD-CNICLDFAADPV---VTLCGHLYCWPCIYEWLRPSV 482 N+L K+ ++P +D C ICLD D + C H Y C+ WL Sbjct: 216 NRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL---- 271 Query: 483 VSATSGDNTSARQQCPVCK 539 T ++ CPVCK Sbjct: 272 --------TKTKKTCPVCK 282
>RNF13_CHICK (Q90972) RING finger protein 13 (C-RZF)| Length = 381 Score = 33.9 bits (76), Expect = 0.35 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFD-CNICLDFAADPV---VTLCGHLYCWPCIYEWLRPSV 482 N+L K+ ++P +D C ICLD D + C H Y C+ WL Sbjct: 216 NRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL---- 271 Query: 483 VSATSGDNTSARQQCPVCK 539 T ++ CPVCK Sbjct: 272 --------TKTKKTCPVCK 282
>CBLBA_XENLA (Q6GQL0) E3 ubiquitin-protein ligase CBL-B-A (EC 6.3.2.-) (Signal| transduction protein CBL-B-A) (SH3-binding protein CBL-B-A) Length = 918 Score = 33.9 bits (76), Expect = 0.35 Identities = 16/55 (29%), Positives = 21/55 (38%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 384 CKICAENDKDVKIEPCGHLMCTSCLTSW------------QESDGQGCPFCRCEI 426
>TRI10_PIG (O19085) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 482 Score = 33.5 bits (75), Expect = 0.46 Identities = 18/73 (24%), Positives = 30/73 (41%) Frame = +3 Query: 351 ATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCP 530 A+ ++ + +C IC +PV CGH +C C+ +L + + CP Sbjct: 5 ASVSSLADEVNCPICQGTLREPVTIDCGHNFCCVCLTRYLEIPCL------DPGELPTCP 58 Query: 531 VCKAALSADSLVP 569 +CK S P Sbjct: 59 LCKEPFRPGSFRP 71
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 33.5 bits (75), Expect = 0.46 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Frame = +3 Query: 357 ATAGSGSFDCNICLDFAADPVVTL---CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQC 527 A AG G C +C D A P+ C H +C PC+ W+ R C Sbjct: 117 AEAGGGGDVCAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWI-------------PLRNTC 163 Query: 528 PVCKAALS 551 P+C ++ Sbjct: 164 PLCNTPVA 171
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 33.5 bits (75), Expect = 0.46 Identities = 17/64 (26%), Positives = 27/64 (42%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP C AA A Sbjct: 948 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 995 Query: 564 VPLY 575 +Y Sbjct: 996 HRVY 999
>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)| Length = 544 Score = 33.5 bits (75), Expect = 0.46 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = +3 Query: 384 CNICLDFA---ADP------VVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVC 536 C IC++ ADP ++ C H YC CI W SAT +N ++ CP C Sbjct: 347 CGICMEVVYEKADPTDRRFGILFSCNHTYCLRCIRRWR-----SATQFENRISK-SCPQC 400 Query: 537 KAA 545 + + Sbjct: 401 RVS 403
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 33.5 bits (75), Expect = 0.46 Identities = 16/55 (29%), Positives = 21/55 (38%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAW------------QESDGQGCPFCRCEI 415
>CBLB_HUMAN (Q13191) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) (RING finger protein 56) Length = 982 Score = 33.5 bits (75), Expect = 0.46 Identities = 16/55 (29%), Positives = 21/55 (38%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAW------------QESDGQGCPFCRCEI 415
>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney| inhibitor of apoptosis protein) (KIAP) (Melanoma inhibitor of apoptosis protein) (ML-IAP) (Livin) Length = 298 Score = 33.5 bits (75), Expect = 0.46 Identities = 17/53 (32%), Positives = 20/53 (37%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 C +CLD A V CGHL C C Q CP+C+A Sbjct: 252 CKVCLDRAVSIVFVPCGHLVCAEC-----------------APGLQLCPICRA 287
>CBLC_MOUSE (Q80XL1) Signal transduction protein CBL-C (SH3-binding protein| CBL-C) (CBL-3) Length = 496 Score = 33.5 bits (75), Expect = 0.46 Identities = 17/63 (26%), Positives = 23/63 (36%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 350 CKICAERDKDVRIEPCGHLLCSCCLAAW------------QDSDSQTCPFCRCEIKGREA 397 Query: 564 VPL 572 V + Sbjct: 398 VSI 400
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 33.5 bits (75), Expect = 0.46 Identities = 16/55 (29%), Positives = 21/55 (38%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAAL 548 C IC + D + CGHL C C+ W S Q CP C+ + Sbjct: 373 CKICAENDKDVKIEPCGHLMCTSCLTAW------------QESDGQGCPFCRCEI 415
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 33.5 bits (75), Expect = 0.46 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C IC + + V T CGHL+C C+ + + + S CP+C+ S + L Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVF--------CCPLCRKPCSEEVL 65
>ATL5G_ARATH (Q9LF64) Probable RING-H2 finger protein ATL5G| Length = 362 Score = 33.5 bits (75), Expect = 0.46 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Frame = +3 Query: 216 ELSATDSILIAMEGGGMDQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNIC 395 + S+++++ + G G TN ++++ ++K+I+ + DC++C Sbjct: 87 QTSSSETLNLNHNGEGFFSSTQRISTNGDGLNES-MIKSITVYKYKSGDGFVDGSDCSVC 145 Query: 396 L-DFAADPVVTL---CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 L +F + + L C H + PCI WL+ + CP+C+A Sbjct: 146 LSEFEENESLRLLPKCNHAFHLPCIDTWLK-------------SHSNCPLCRA 185
>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)| Length = 275 Score = 33.5 bits (75), Expect = 0.46 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 348 PATATAGSGSFDCNICLDFAADPVVTLCGHL-YCWPCIY 461 PA A AGS + +C +CL+ D V+ C H C C + Sbjct: 215 PAPAFAGSEALECKVCLERQRDAVLLPCRHFCVCMQCYF 253
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 33.5 bits (75), Expect = 0.46 Identities = 17/64 (26%), Positives = 27/64 (42%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C C D V+T C H++C+ C+ G + +++CP C AA A Sbjct: 949 CPCCNTRKKDAVLTKCFHVFCFECV------------RGRYEARQRKCPKCNAAFGAHDF 996 Query: 564 VPLY 575 +Y Sbjct: 997 HRVY 1000
>YQDA_CAEEL (Q09268) Hypothetical RING finger protein C32D5.10 in chromosome II| Length = 610 Score = 33.1 bits (74), Expect = 0.60 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 10/96 (10%) Frame = +3 Query: 294 NQPSVSDNKLMKNIS---GEMPATATAGSGSF------DCNICLDFAADPV-VTLCGHLY 443 + PS S++ L KN GE T + S +C++C + D ++ C H + Sbjct: 2 DSPSTSESPLKKNTIQDFGESNMTESPQSKEEIDEPEEECSVCKNEIIDTTSLSDCCHEF 61 Query: 444 CWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C+ CI WL T G CP+CK +S Sbjct: 62 CYDCIVGWL-------TKGSGPF----CPMCKTPVS 86
>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity| protein 5) (Revertibility protein 2) Length = 1169 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = +3 Query: 375 SFDCNICLDFAAD---PVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAA 545 S +C+IC D + T CGH +C C++E++ ++ + +CP C+ Sbjct: 911 SLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIE-------FQNSKNLGLKCPNCRNQ 963 Query: 546 LSADSLVPL 572 + A L+ L Sbjct: 964 IDACRLLAL 972
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 33.1 bits (74), Expect = 0.60 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 C+ICL P+ T CGH +C C+ +L+ Sbjct: 51 CHICLQPLLQPLDTPCGHTFCHKCLRNFLQ 80
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 33.1 bits (74), Expect = 0.60 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSAD 557 F C +C + PV T CGH +C C ++ G+NT A A Sbjct: 163 FKCVLCKESYERPVKTNCGHYFCQKCFVNRIKIDKSCFICGENTEG--------IAKMAT 214 Query: 558 SLVPL 572 LVP+ Sbjct: 215 DLVPM 219
>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein| ATL16) Length = 375 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Frame = +3 Query: 375 SFDCNICLDFAADP----VVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 S +C++CL D ++ C HL+ CI WL+ + CP+C+ Sbjct: 135 SQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNA-------------NCPLCRT 181 Query: 543 ALSADSLVP 569 +S D+ P Sbjct: 182 RVSCDTSFP 190
>ATL3L_ARATH (Q9LZJ6) RING-H2 finger protein ATL3L (RING-H2 finger protein ATL5)| Length = 257 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Frame = +3 Query: 381 DCNICL-DFAADP---VVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKA 542 +C++CL +F D V+ CGH++ CI W R +R CP+C+A Sbjct: 112 ECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR-------------SRSSCPLCRA 156
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 32.7 bits (73), Expect = 0.78 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +3 Query: 381 DCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 +C IC+D D ++ C H +C CI +W + + CPVC+ Sbjct: 154 ECCICMDGRVDLILP-CAHSFCQKCIDKW-------------SDRHRSCPVCR 192
>UHRF1_MOUSE (Q8VDF2) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Nuclear zinc finger protein Np95) (Nuclear protein 95) Length = 782 Score = 32.7 bits (73), Expect = 0.78 Identities = 18/62 (29%), Positives = 23/62 (37%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 +F C C + PV T+C H C C+ R V S CP C+ L Sbjct: 710 AFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFS------------CPACRFELDH 757 Query: 555 DS 560 S Sbjct: 758 SS 759
>RFP2_HUMAN (O60858) Ret finger protein 2 (Leukemia-associated protein 5)| (B-cell chronic lymphocytic leukemia tumor suppressor Leu5) (Putative tumor suppressor RFP2) (Tripartite motif protein 13) (RING finger protein 77) Length = 407 Score = 32.7 bits (73), Expect = 0.78 Identities = 19/60 (31%), Positives = 26/60 (43%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C IC DP V C H +C C+ L SV ++ A +CP C+ SA + Sbjct: 10 CPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLW---RPAPFKCPTCRKETSATGI 66
>PEX2_RAT (P24392) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 305 Score = 32.7 bits (73), Expect = 0.78 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 7/60 (11%) Frame = +3 Query: 300 PSVSDNKLMKNISGE-MPATATAGSGSF------DCNICLDFAADPVVTLCGHLYCWPCI 458 P ++ KL +S +P T+TAGS S +C +C ++ P C H++C+ C+ Sbjct: 209 PLINIQKLKAKLSSWCIPLTSTAGSDSTLGSSGKECALCGEWPTMPHTIGCEHVFCYYCV 268
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 32.7 bits (73), Expect = 0.78 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCI-YEWLRPSVVSATSGDNTSARQQCPVCKAALS 551 C +C +PV+ CGH +C CI W S S CP CK L+ Sbjct: 162 CPLCRSLFKEPVILECGHNFCKHCIDKSWESASAFS------------CPECKEVLT 206
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 32.7 bits (73), Expect = 0.78 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPC 455 F C IC PVVT CGH +C C Sbjct: 235 FACLICRQPFTQPVVTKCGHYFCMGC 260
>MKRN2_BRARE (Q9DFG8) Makorin-2| Length = 414 Score = 32.7 bits (73), Expect = 0.78 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 15/109 (13%) Frame = +3 Query: 258 GGMDQVCMAAMTN-----QPSVSDNKLMKNISGEMP-ATATAGSGSFDCNICLDFAADP- 416 G M ++C + + Q + + K M +M A A S C ICLD + Sbjct: 189 GEMCEICRQHVLHPHDPEQRAAHEKKCMVAFEMDMERAFAVQQSQDKVCKICLDVVYEKS 248 Query: 417 --------VVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 +++ C H YC CI +W + R+ CP C+ Sbjct: 249 SPSERRFGILSSCAHTYCLNCIRQW------RCVEQLHNQIRKSCPECR 291
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 32.7 bits (73), Expect = 0.78 Identities = 15/64 (23%), Positives = 29/64 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C++C + + CGH++C C E L + ++CP C A S++ L Sbjct: 648 CSLCSKNWKNMAIKTCGHVFCENCCKERL------------AARMRKCPTCNKAFSSNDL 695 Query: 564 VPLY 575 + ++ Sbjct: 696 LTVH 699
>TRI63_HUMAN (Q969Q1) Ubiquitin ligase TRIM63 (EC 6.3.2.-) (Tripartite| motif-containing 63) (Muscle-specific RING finger protein 1) (MuRF1) (MURF-1) (RING finger protein 28) (Striated muscle RING zinc finger protein) (Iris RING finger protein) Length = 353 Score = 32.3 bits (72), Expect = 1.0 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = +3 Query: 384 CNICLDFAADPVVTL-CGHLYCWPC---IYEWLRPSVVSATSGDNTS-ARQQCPVCKAAL 548 C ICL+ PVV L C H C C I++ P S S + S R +CP C+ + Sbjct: 23 CPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMSGGRFRCPTCRHEV 82 Query: 549 SAD 557 D Sbjct: 83 IMD 85
>UHRF1_RAT (Q7TPK1) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Liver regeneration-related protein LRRG126) Length = 774 Score = 32.3 bits (72), Expect = 1.0 Identities = 18/62 (29%), Positives = 23/62 (37%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 +F C C + PV T+C H C C+ R V S CP C+ L Sbjct: 702 AFQCICCQELVFRPVTTVCQHNVCKDCLDRSFRAQVFS------------CPACRYDLDH 749 Query: 555 DS 560 S Sbjct: 750 SS 751
>TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein) (Tripartite| motif protein 27) (RING finger protein 76) Length = 513 Score = 32.3 bits (72), Expect = 1.0 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYE-WLRPSVVSATSGDNTSARQQCPVCK 539 C +CL + A+P++ CGH C C+ W T+ N S CP C+ Sbjct: 16 CPVCLQYFAEPMMLDCGHNICCACLARCW-------GTAETNVS----CPQCR 57
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 32.3 bits (72), Expect = 1.0 Identities = 22/85 (25%), Positives = 33/85 (38%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSAT 494 ++ MKN+ E+ C +CL+ PV CGH +C CI + Sbjct: 3 SQFMKNLKEEVT-----------CPVCLNLMVKPVSADCGHTFCQGCITLYFE------- 44 Query: 495 SGDNTSARQQCPVCKAALSADSLVP 569 S CPVC+ + +L P Sbjct: 45 SIKCDKKVFICPVCRISYQFSNLRP 69
>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24| Length = 256 Score = 32.3 bits (72), Expect = 1.0 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = +3 Query: 351 ATATAGSGSFD-CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQC 527 AT+ A SG D C IC PVVT C H +C C + G NT+ Sbjct: 194 ATSRADSGIPDTCPICQGEFKSPVVTQCCHYFCEKCFLAKHKKKQNCFVCGKNTNG---- 249 Query: 528 PVCK 539 VCK Sbjct: 250 -VCK 252
>PEX12_DROME (Q9VPT5) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 297 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Frame = +3 Query: 288 MTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVV-TLCGHLYCWPCIYE 464 + N ++ +L K + +P +C +CL P ++ G+++CW CI Sbjct: 219 LINPEAMPRKQLPKEVQQSLPQRG-------ECPVCLLSIQTPTACSVSGYVFCWKCIVS 271 Query: 465 WLRPSVVSATSGDNTSARQQCPVCKAALSADSLVPLY 575 ++ CPV +S D LV +Y Sbjct: 272 HMK-------------EHGTCPVTHYPISLDDLVRIY 295
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 32.3 bits (72), Expect = 1.0 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 F C IC +PVVT C H +C C E R Sbjct: 254 FRCFICRQAFQNPVVTKCRHYFCESCALEHFR 285
>RNF13_MOUSE (O54965) RING finger protein 13| Length = 381 Score = 32.3 bits (72), Expect = 1.0 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Frame = +3 Query: 315 NKLMKNISGEMPATATAGSGSFD-CNICLDFAADPV---VTLCGHLYCWPCIYEWLRPSV 482 N+L K+ ++P +D C ICL+ D + C H Y C+ WL Sbjct: 216 NRLRKDQLKKLPVHKFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWL---- 271 Query: 483 VSATSGDNTSARQQCPVCK 539 T ++ CPVCK Sbjct: 272 --------TKTKKTCPVCK 282
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 32.3 bits (72), Expect = 1.0 Identities = 15/53 (28%), Positives = 21/53 (39%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVC 536 F C +C PVVT C H +C C + ++ S CP+C Sbjct: 169 FRCFLCKKEYTSPVVTKCNHYFCSSCFMKQMKVST-------------NCPIC 208
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C C D V+T C H++C+ C+ T D + +++CP C AA A+ Sbjct: 922 CPCCNMRKKDAVLTKCFHVFCFECV----------KTRYD--TRQRKCPKCNAAFGANDF 969 Query: 564 VPLY 575 +Y Sbjct: 970 HRIY 973
>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24| Length = 250 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQ 524 F C +C PV T CGH +C C +R + A G +T Q Sbjct: 156 FRCVLCRGHYRAPVRTRCGHYFCGGCFARRVRETRQCAVCGADTQGVAQ 204
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C C D V+T C H++C+ C+ T D + +++CP C AA A+ Sbjct: 920 CPCCNMRKKDAVLTKCFHVFCFECV----------KTRYD--TRQRKCPKCNAAFGANDF 967 Query: 564 VPLY 575 +Y Sbjct: 968 HRIY 971
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 32.0 bits (71), Expect = 1.3 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Frame = +3 Query: 375 SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALS- 551 S C +C ++PV + C HL+C CI +++ S CP C Sbjct: 307 SVTCQVCDHLLSEPVQSPCRHLFCRSCIAKYI------------YSLGPHCPACTLPCGP 354 Query: 552 ADSLVPLYG 578 AD P G Sbjct: 355 ADLTAPAKG 363
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 C ICL+ ++ + L C H +C+ CI W+R + CP+CK + + Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIRQN-------------PTCPLCKVPVES 52
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTL-CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 C ICL+ ++ + L C H +C+ CI W+R + CP+CK + + Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIRQN-------------PTCPLCKVPVES 52
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADSL 563 C C D V+T C H++C+ C+ T D + +++CP C AA A+ Sbjct: 931 CPCCNMRKKDAVLTKCFHVFCFECV----------KTRYD--TRQRKCPKCNAAFGANDF 978 Query: 564 VPLY 575 +Y Sbjct: 979 HRIY 982
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 32.0 bits (71), Expect = 1.3 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +3 Query: 258 GGMDQVCMAAMTNQPSVSDNKLMKNISGEMPATATAGSGSFDCNICLDFAADPVVTL-CG 434 GG + N S S + L G+ +A S F+C +C D+ P++ G Sbjct: 49 GGSSSAGTTSSANTSSSSSSSLSSAGGGDAGMSADLTS-LFECPVCFDYVLPPILQCSSG 107 Query: 435 HLYCWPC 455 HL C C Sbjct: 108 HLVCVSC 114
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 31.6 bits (70), Expect = 1.7 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 4/74 (5%) Frame = +3 Query: 339 GEMPATATAGSGSFD-CNICLDFAADPV---VTLCGHLYCWPCIYEWLRPSVVSATSGDN 506 G P GS D C +C D A + C H +C PC+ W++ Sbjct: 100 GGAPPREDGGSDEGDVCAVCTDEIAPHLRCDTFPCMHRFCIPCMKTWMQ----------- 148 Query: 507 TSARQQCPVCKAAL 548 R CP+C A L Sbjct: 149 --LRNTCPLCNAKL 160
>TRAIP_MOUSE (Q8VIG6) TRAF-interacting protein| Length = 470 Score = 31.6 bits (70), Expect = 1.7 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Frame = +3 Query: 384 CNICLDF---AADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 C IC DF + D CGH + C+ +W T+ + CP C+ + Sbjct: 7 CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWF-----------ETAPSRTCPQCRIQVGK 55 Query: 555 DSLV 566 +++ Sbjct: 56 KTII 59
>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)| (Tripartite motif protein 33) Length = 1142 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +3 Query: 408 ADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQ----QCPVCKAALSADSLVPLY 575 A+P + C H +C C+ E R V G N +Q +CPVC+ LV Y Sbjct: 154 AEPKLLPCLHSFCLRCLPEPERQLSVPIPGGSNGDVQQVGVIRCPVCRQECRQIDLVDNY 213
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 31.6 bits (70), Expect = 1.7 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 F C IC +PVVT C H +C C + R Sbjct: 260 FKCFICRQTFQNPVVTKCRHYFCESCALQHFR 291
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 31.6 bits (70), Expect = 1.7 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +3 Query: 378 FDCNICLDFAADPVVTLCGHLYCWPCIYEWLR 473 F C IC +PVVT C H +C C + R Sbjct: 260 FKCFICRQSFQNPVVTKCRHYFCESCALQHFR 291
>SUZ2_DROME (P25172) Protein suppressor 2 of zeste (Protein posterior sex| combs) Length = 1368 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = +3 Query: 384 CNICLDFAADPV-VTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAA 545 C +C + DP V C H YC CI + L +V CP CKA+ Sbjct: 35 CRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRAV-------------YCPECKAS 76
>ASR1_ASHGO (Q75DC2) Alcohol-sensitive RING finger protein 1| Length = 328 Score = 31.6 bits (70), Expect = 1.7 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Frame = +3 Query: 321 LMKNISGEMPATATAGSGSFDCNICLDFAADPVVTL--CGHLYCWPCIYEWLRPSVVSAT 494 ++K+IS + G +C+IC + V L CGH Y CI +W Sbjct: 1 MLKHISSHI----AMGCPQDECSICWESMPSGVGRLMPCGHEYHLACIRKWFHLH----- 51 Query: 495 SGDNTSARQQCPVCKAALS 551 S + CPVC+ S Sbjct: 52 -----SGNRSCPVCRTEAS 65
>TRAIP_HUMAN (Q9BWF2) TRAF-interacting protein| Length = 469 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Frame = +3 Query: 384 CNICLDF---AADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSA 554 C IC DF + D CGH + C+ +W T+ + CP C+ + Sbjct: 7 CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWF-----------ETAPSRTCPQCRIQVGK 55 Query: 555 DSLV 566 +++ Sbjct: 56 RTII 59
>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)| (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite motif protein 33) Length = 1127 Score = 31.2 bits (69), Expect = 2.3 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +3 Query: 408 ADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQ----QCPVCKAALSADSLVPLY 575 A+P + C H +C C+ E R V G N +Q +CPVC+ LV Y Sbjct: 138 AEPKLLPCLHSFCLRCLPEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQECRQIDLVDNY 197
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCK 539 C IC + + V T CGHL+C C+ + + + S CP+C+ Sbjct: 14 CPICQESLKEAVSTNCGHLFCRVCLTQHVEKASASGVF-------CCCPLCR 58
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 31.2 bits (69), Expect = 2.3 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = +3 Query: 384 CNICLD-FAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPVCKAALSADS 560 C IC + F ++ C H YC CI ++L S + QCP C A++ Sbjct: 25 CGICFEYFNIAVIIPQCSHNYCSLCIRKFL-------------SYKTQCPTCCVAVTEPD 71 Query: 561 L 563 L Sbjct: 72 L 72
>FMO1_RAT (P36365) Dimethylaniline monooxygenase [N-oxide-forming] 1 (EC| 1.14.13.8) (Hepatic flavin-containing monooxygenase 1) (FMO 1) (Dimethylaniline oxidase 1) Length = 532 Score = 31.2 bits (69), Expect = 2.3 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -3 Query: 427 RVTTGSAAKSRQMLQSKEPLPAVAVAG-ISPLMFFISLLSDTEGWLVMAAMQTWSIPPPS 251 +V G A+ + + + P P +AV G I PL I W+V ++PPPS Sbjct: 344 KVEDGQASLYKYIFPAHLPKPTLAVIGLIKPLGSMIPTGETQARWVVQVLKGATTLPPPS 403 Query: 250 IAIR 239 + ++ Sbjct: 404 VMMK 407
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 31.2 bits (69), Expect = 2.3 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = +3 Query: 384 CNICLDFAADPVVTLCGHLYCWPCIYEWLRPSVVSATSGDNTSAR-QQCPVCKAALSADS 560 C++C D + +CGH++C C + D AR ++CP C S + Sbjct: 648 CSLCSKNWKDTALKVCGHVFCHQC-------------AQDRLDARLRKCPNCNKPFSQND 694 Query: 561 LVPLY 575 L+ ++ Sbjct: 695 LLTVH 699
>ATL4B_ARATH (Q9M0R6) Putative RING-H2 finger protein ATL4B precursor| Length = 302 Score = 31.2 bits (69), Expect = 2.3 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 4/66 (6%) Frame = +3 Query: 366 GSGSFDCNICLDFAADPVVTL----CGHLYCWPCIYEWLRPSVVSATSGDNTSARQQCPV 533 G G +C ICL D C H + CI WL S++ CP Sbjct: 117 GKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWL-------------SSQSTCPA 163 Query: 534 CKAALS 551 C+A LS Sbjct: 164 CRANLS 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,430,175 Number of Sequences: 219361 Number of extensions: 1684595 Number of successful extensions: 5696 Number of sequences better than 10.0: 331 Number of HSP's better than 10.0 without gapping: 5412 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5656 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
