ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 211 cggcttcttcaacgtggccaagctcaagaagtccatggcgaaggcgctggtgcccttcta 270 |||||||||| |||||| || ||||||| || | |||| |||||||||||| ||||||| Sbjct: 82449 cggcttcttcgacgtgggcaggctcaaggaggctctggccaaggcgctggtggccttcta 82390 Query: 271 cccgctcgccggccgc 286 ||| |||||||||||| Sbjct: 82389 ccccctcgccggccgc 82374
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 211 cggcttcttcaacgtggccaagctcaagaagtccatggcgaaggcgctggtgcccttcta 270 |||||||||| |||||| || ||||||| || | |||| |||||||||||| ||||||| Sbjct: 4110787 cggcttcttcgacgtgggcaggctcaaggaggctctggccaaggcgctggtggccttcta 4110728 Query: 271 cccgctcgccggccgc 286 ||| |||||||||||| Sbjct: 4110727 ccccctcgccggccgc 4110712 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 cgccagcgacgtcgccgccgcc 208 |||||||||||||||||||||| Sbjct: 2490656 cgccagcgacgtcgccgccgcc 2490677 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgccagcgacgtcgccgccg 206 |||||||||||||||||||| Sbjct: 23901365 cgccagcgacgtcgccgccg 23901346
>dbj|AK104889.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C12, full insert sequence Length = 1440 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 211 cggcttcttcaacgtggccaagctcaagaagtccatggcgaaggcgctggtgcccttcta 270 |||||||||| |||||| || ||||||| || | |||| |||||||||||| ||||||| Sbjct: 157 cggcttcttcgacgtgggcaggctcaaggaggctctggccaaggcgctggtggccttcta 216 Query: 271 cccgctcgccggccgc 286 ||| |||||||||||| Sbjct: 217 ccccctcgccggccgc 232
>dbj|AK099589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043H09, full insert sequence Length = 1493 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 211 cggcttcttcaacgtggccaagctcaagaagtccatggcgaaggcgctggtgcccttcta 270 |||||||||| |||||| || ||||||| || | |||| |||||||||||| ||||||| Sbjct: 184 cggcttcttcgacgtgggcaggctcaaggaggctctggccaaggcgctggtggccttcta 243 Query: 271 cccgctcgccggccgc 286 ||| |||||||||||| Sbjct: 244 ccccctcgccggccgc 259
>dbj|AK060023.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H06, full insert sequence Length = 1442 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 211 cggcttcttcaacgtggccaagctcaagaagtccatggcgaaggcgctggtgcccttcta 270 |||||||||| |||||| || ||||||| || | |||| |||||||||||| ||||||| Sbjct: 180 cggcttcttcgacgtgggcaggctcaaggaggctctggccaaggcgctggtggccttcta 239 Query: 271 cccgctcgccggccgc 286 ||| |||||||||||| Sbjct: 240 ccccctcgccggccgc 255
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 211 cggcttcttcaacgtggccaagctcaagaagtccatggcgaaggcgctggtgcccttcta 270 |||||||||| |||||| || ||||||| || | |||| |||||||||||| ||||||| Sbjct: 4119481 cggcttcttcgacgtgggcaggctcaaggaggctctggccaaggcgctggtggccttcta 4119422 Query: 271 cccgctcgccggccgc 286 ||| |||||||||||| Sbjct: 4119421 ccccctcgccggccgc 4119406 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 cgccagcgacgtcgccgccgcc 208 |||||||||||||||||||||| Sbjct: 2499730 cgccagcgacgtcgccgccgcc 2499751 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgccagcgacgtcgccgccg 206 |||||||||||||||||||| Sbjct: 24213034 cgccagcgacgtcgccgccg 24213015
>ref|XM_473839.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1374 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggc 283 ||||||||||||||||||| |||||||||||||||||| Sbjct: 200 tggcgaaggcgctggtgccgttctacccgctcgccggc 237
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggc 283 ||||||||||||||||||| |||||||||||||||||| Sbjct: 171298 tggcgaaggcgctggtgccgttctacccgctcgccggc 171335
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggc 283 ||||||||||||||||||| |||||||||||||||||| Sbjct: 1145 tggcgaaggcgctggtgccgttctacccgctcgccggc 1182
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggc 283 ||||||||||||||||||| |||||||||||||||||| Sbjct: 30903777 tggcgaaggcgctggtgccgttctacccgctcgccggc 30903814 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 ||||||||||||||||||||| || | ||||||||| Sbjct: 24969738 cgagatcgactgcaacggggaaggggtgctcttcgt 24969773 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 30644142 ccttctacccgctcgccggccgc 30644120 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgcctcg 290 |||||||||||| ||||||||||||| Sbjct: 18269428 cttctacccgctggccggccgcctcg 18269403
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggc 283 ||||||||||||||||||| |||||||||||||||||| Sbjct: 80771 tggcgaaggcgctggtgccgttctacccgctcgccggc 80808
>gb|BT009450.1| Triticum aestivum clone wlmk8.pk0021.e3:fis, full insert mRNA sequence Length = 1587 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgcctcgg 291 |||| ||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 246 tggccaaggcgctggtgctcttctacccgctggccgggcgcctcgg 291 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 315 agatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||| ||||| ||||||||||| Sbjct: 318 agatcgactgcaacggcgagggagcgctcttcgt 351
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 257 ctggtgcccttctacccgctcgccggccgcctcgg 291 |||||||| |||||||||||||||||||| ||||| Sbjct: 4297817 ctggtgccgttctacccgctcgccggccggctcgg 4297851 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 263 cccttctacccgctcgccggccgcctcg 290 ||||||||||| |||||||||||||||| Sbjct: 4280192 cccttctaccccctcgccggccgcctcg 4280219 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 253 ggcgctggtgcccttctacccgctcgccggccgcctcgg 291 |||||| ||| | ||||||||| |||||||||||||||| Sbjct: 4313705 ggcgctcgtggcgttctacccggtcgccggccgcctcgg 4313667
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 257 ctggtgcccttctacccgctcgccggccgcctcgg 291 |||||||| |||||||||||||||||||| ||||| Sbjct: 143038 ctggtgccgttctacccgctcgccggccggctcgg 143072 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 263 cccttctacccgctcgccggccgcctcg 290 ||||||||||| |||||||||||||||| Sbjct: 125413 cccttctaccccctcgccggccgcctcg 125440 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 253 ggcgctggtgcccttctacccgctcgccggccgcctcgg 291 |||||| ||| | ||||||||| |||||||||||||||| Sbjct: 158926 ggcgctcgtggcgttctacccggtcgccggccgcctcgg 158888
>dbj|AK109116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C07, full insert sequence Length = 1183 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 257 ctggtgcccttctacccgctcgccggccgcctcgg 291 |||||||| |||||||||||||||||||| ||||| Sbjct: 293 ctggtgccgttctacccgctcgccggccggctcgg 327
>ref|NM_194749.1| Oryza sativa (japonica cultivar-group) putative hsr201 hypersensitivity-related protein (OSJNBa0013J21.8), mRNA Length = 522 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgc 286 ||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 227 tggcggaggcgctggtgagcttctacccgctggccggccgc 267
>ref|XM_465691.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1791 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgcctc 289 ||||||||||||||||||||||||| Sbjct: 328 cttctacccgctcgccggccgcctc 352
>ref|XM_465687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1518 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgcctc 289 ||||||||||||||||||||||||| Sbjct: 258 cttctacccgctcgccggccgcctc 282
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgc 286 ||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 44846 tggcggaggcgctggtgagcttctacccgctggccggccgc 44886 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgcctc 289 ||||| ||||||||||| ||||||||| || |||||||||||| Sbjct: 31623 tggcggaggcgctggtgagcttctacccactggccggccgcctc 31666
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 202 cgccgccaacggcttcttcaacgtg 226 ||||||||||||||||||||||||| Sbjct: 4181888 cgccgccaacggcttcttcaacgtg 4181864
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgc 286 ||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 2066706 tggcggaggcgctggtgagcttctacccgctggccggccgc 2066746 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgcctc 289 ||||| ||||||||||| ||||||||| || |||||||||||| Sbjct: 2053483 tggcggaggcgctggtgagcttctacccactggccggccgcctc 2053526
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 202 cgccgccaacggcttcttcaacgtg 226 ||||||||||||||||||||||||| Sbjct: 306133 cgccgccaacggcttcttcaacgtg 306157
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgc 286 ||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 2066706 tggcggaggcgctggtgagcttctacccgctggccggccgc 2066746 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgcctc 289 ||||| ||||||||||| ||||||||| || |||||||||||| Sbjct: 2053483 tggcggaggcgctggtgagcttctacccactggccggccgcctc 2053526
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgcctc 289 ||||||||||||||||||||||||| Sbjct: 16802268 cttctacccgctcgccggccgcctc 16802292 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgcctc 289 ||||||||||||||||||||||||| Sbjct: 16793049 cttctacccgctcgccggccgcctc 16793025 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 314 gagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||||| |||| ||| ||||| Sbjct: 24100590 gagatcgactgcaacggggaaggcgtgctgttcgt 24100624 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 16905949 ccttctacccgctcgccggccgc 16905971 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 16850149 ccttctacccgctcgccggccgc 16850171 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 16826407 ccttctacccgctcgccggccgc 16826429 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 tctacccgctcgccggccgcctc 289 ||||||||||||||||||||||| Sbjct: 16779496 tctacccgctcgccggccgcctc 16779474
>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036H07 Length = 149797 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgcctc 289 ||||||||||||||||||||||||| Sbjct: 3325 cttctacccgctcgccggccgcctc 3349 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 107006 ccttctacccgctcgccggccgc 107028 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 51206 ccttctacccgctcgccggccgc 51228 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 27464 ccttctacccgctcgccggccgc 27486
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgcctc 289 ||||||||||||||||||||||||| Sbjct: 50510 cttctacccgctcgccggccgcctc 50534 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgcctc 289 ||||||||||||||||||||||||| Sbjct: 41291 cttctacccgctcgccggccgcctc 41267 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 98391 ccttctacccgctcgccggccgc 98413 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 74649 ccttctacccgctcgccggccgc 74671 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 tctacccgctcgccggccgcctc 289 ||||||||||||||||||||||| Sbjct: 27738 tctacccgctcgccggccgcctc 27716
>dbj|AB076982.1| Avena sativa AsHHT3 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 3, complete cds Length = 1659 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccg 274 ||||| ||||||||||||||||||||||| Sbjct: 194 tggcggaggcgctggtgcccttctacccg 222 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 314 gagatcgactgcaacggggagggcgcgctcttcgtgg 350 |||||||||||||||| ||||| | ||||||||||| Sbjct: 262 gagatcgactgcaacgctgagggggtgctcttcgtgg 298
>dbj|AB076980.1| Avena sativa AsHHT1 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 1, complete cds Length = 1755 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 314 gagatcgactgcaacggggagggcgcgctcttcgtgg 350 |||||||||||||||| |||||| | ||||||||||| Sbjct: 389 gagatcgactgcaacgcggagggggtgctcttcgtgg 425 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccg 274 ||||| ||||||||||||||||||||||| Sbjct: 321 tggcggaggcgctggtgcccttctacccg 349
>dbj|AK103832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148A21, full insert sequence Length = 1790 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgcctc 289 ||||||||||||||||||||||||| Sbjct: 327 cttctacccgctcgccggccgcctc 351
>dbj|AK066866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088O08, full insert sequence Length = 1766 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgc 286 ||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 275 tggcggaggcgctggtgagcttctacccgctggccggccgc 315
>gb|AY106809.1| Zea mays PCO076728 mRNA sequence Length = 1385 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Plus Query: 435 agccgtcgtccatcatgttggccgcacaggtcaccttcttgaagtgcggcggtgtggtct 494 |||| ||||||||||| ||||| |||||| || ||||||||||| || |||||||| | Sbjct: 214 agccatcgtccatcataatggccatacaggtgactttcttgaagtgtggaggtgtggtgt 273 Query: 495 tagtgacggctgtgcaccacgccgc 519 ||| || ||| | ||||||||||| Sbjct: 274 taggaacagctatccaccacgccgc 298
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgc 286 ||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 2066657 tggcggaggcgctggtgagcttctacccgctggccggccgc 2066697 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgcctc 289 ||||| ||||||||||| ||||||||| || |||||||||||| Sbjct: 2053434 tggcggaggcgctggtgagcttctacccactggccggccgcctc 2053477
>ref|XM_483602.1| Oryza sativa (japonica cultivar-group), mRNA Length = 507 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 114 aagggctctggctctcggcgctggacctggtgctggccaacagaggccacacccct 169 |||||||||||||||| | || ||| | || ||||||||||||||||| |||||| Sbjct: 215 aagggctctggctctctcccctcgacatcgtcctggccaacagaggccatacccct 270
>ref|XM_473058.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 ||||||||||||||||||||| || | ||||||||| Sbjct: 261 cgagatcgactgcaacggggaaggggtgctcttcgt 296
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 ||||||||||||||||||||| || | ||||||||| Sbjct: 90323 cgagatcgactgcaacggggaaggggtgctcttcgt 90358
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgctcgccggccgcctc 289 ||||| ||||||||||| ||||||||| || |||||||||||| Sbjct: 144212 tggcggaggcgctggtgagcttctacccactggccggccgcctc 144255
>dbj|AB218791.1| Prunus mume Pm94 mRNA for Alcohol acyl-transferase, complete cds Length = 1695 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 302 gacggccgcaacgagatcgactgcaacgggga 333 |||||||| | ||||||||||||||||||||| Sbjct: 411 gacggccgtatcgagatcgactgcaacgggga 442
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 187 cgccagcgacgtcgccgccgccaacggc 214 ||||| |||||||||||||||||||||| Sbjct: 22257 cgccaccgacgtcgccgccgccaacggc 22230
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||| ||||| ||||| ||||| Sbjct: 15201320 cgagatcgactgcaacggcgagggggcgctgttcgt 15201285 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 246 tggcgaaggcgctggtgcccttctacccgct 276 |||||| |||||||||||| ||||||||||| Sbjct: 15201387 tggcgagggcgctggtgccgttctacccgct 15201357 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 gcgccagcgacgtcgccgccgcca 209 ||||||||| |||||||||||||| Sbjct: 20517319 gcgccagcgtcgtcgccgccgcca 20517342
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 114 aagggctctggctctcggcgctggacctggtgctggccaacagaggccacacccct 169 |||||||||||||||| | || ||| | || ||||||||||||||||| |||||| Sbjct: 27189325 aagggctctggctctctcccctcgacatcgtcctggccaacagaggccatacccct 27189380 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgc 286 |||||||||||||||||||||| Sbjct: 28157775 cttctacccgctcgccggccgc 28157754 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgcctcg 290 |||||||||||| ||||||||||||| Sbjct: 627598 cttctacccgctggccggccgcctcg 627573
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||| ||||| ||||| ||||| Sbjct: 95296 cgagatcgactgcaacggcgagggggcgctgttcgt 95261 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 246 tggcgaaggcgctggtgcccttctacccgct 276 |||||| |||||||||||| ||||||||||| Sbjct: 95363 tggcgagggcgctggtgccgttctacccgct 95333
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 114 aagggctctggctctcggcgctggacctggtgctggccaacagaggccacacccct 169 |||||||||||||||| | || ||| | || ||||||||||||||||| |||||| Sbjct: 90358 aagggctctggctctctcccctcgacatcgtcctggccaacagaggccatacccct 90413
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 114 aagggctctggctctcggcgctggacctggtgctggccaacagaggccacacccct 169 |||||||||||||||| | || ||| | || ||||||||||||||||| |||||| Sbjct: 12528 aagggctctggctctctcccctcgacatcgtcctggccaacagaggccatacccct 12583
>dbj|AK119237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D12, full insert sequence Length = 1827 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 ||||||||||||||||||||| || | ||||||||| Sbjct: 475 cgagatcgactgcaacggggaaggggtgctcttcgt 510
>dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E02, full insert sequence Length = 1500 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 263 cccttctacccgctcgccggccgcctcg 290 ||||||||||| |||||||||||||||| Sbjct: 260 cccttctaccccctcgccggccgcctcg 287
>dbj|AK104637.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D12, full insert sequence Length = 1851 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 ||||||||||||||||||||| || | ||||||||| Sbjct: 381 cgagatcgactgcaacggggaaggggtgctcttcgt 416
>dbj|AK101900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071B22, full insert sequence Length = 1707 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||| ||||| ||||| ||||| Sbjct: 356 cgagatcgactgcaacggcgagggggcgctgttcgt 391 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgct 276 |||||| |||||||||||| ||||||||||| Sbjct: 289 tggcgagggcgctggtgccgttctacccgct 319
>dbj|AK072528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B01, full insert sequence Length = 1881 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 ||||||||||||||||||||| || | ||||||||| Sbjct: 382 cgagatcgactgcaacggggaaggggtgctcttcgt 417
>dbj|AK058559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D08, full insert sequence Length = 1706 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||| ||||| ||||| ||||| Sbjct: 355 cgagatcgactgcaacggcgagggggcgctgttcgt 390 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccgct 276 |||||| |||||||||||| ||||||||||| Sbjct: 288 tggcgagggcgctggtgccgttctacccgct 318
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 313 cgagatcgactgcaacggggagggcgcgctcttcgt 348 ||||||||||||||||||||| || | ||||||||| Sbjct: 97773 cgagatcgactgcaacggggaaggggtgctcttcgt 97808
>ref|XM_466682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1671 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 314 gagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||||| |||| ||| ||||| Sbjct: 369 gagatcgactgcaacggggaaggcgtgctgttcgt 403
>ref|XM_506864.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_A05.15 mRNA Length = 1716 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 314 gagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||||| |||| ||| ||||| Sbjct: 369 gagatcgactgcaacggggaaggcgtgctgttcgt 403
>ref|XM_465706.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 227 ccttctacccgctcgccggccgc 249
>ref|XM_465703.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1404 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 245 ccttctacccgctcgccggccgc 267
>ref|XM_465699.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1473 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 251 ccttctacccgctcgccggccgc 273
>ref|XM_465684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1745 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 tctacccgctcgccggccgcctc 289 ||||||||||||||||||||||| Sbjct: 319 tctacccgctcgccggccgcctc 341
>ref|NM_184024.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1368 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 253 ggcgctggtgcccttctacccgctcgccggc 283 ||||||||||| || |||||||||||||||| Sbjct: 222 ggcgctggtgcactactacccgctcgccggc 252
>ref|XM_473803.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 239 ccttctacccgctcgccggccgc 261
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 119850 ccttctacccgctcgccggccgc 119828
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 47873 ccttctacccgctcgccggccgc 47851
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 253 ggcgctggtgcccttctacccgctcgccggc 283 ||||||||||| || |||||||||||||||| Sbjct: 13940640 ggcgctggtgcactactacccgctcgccggc 13940670 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ccagcgacgtcgccgccgccaacg 212 |||||| ||||||||||||||||| Sbjct: 41107056 ccagcgtcgtcgccgccgccaacg 41107033
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 253 ggcgctggtgcccttctacccgctcgccggccgcctcgg 291 |||||| ||| | ||||||||| |||||||||||||||| Sbjct: 5285 ggcgctcgtggcgttctacccggtcgccggccgcctcgg 5247
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 253 ggcgctggtgcccttctacccgctcgccggc 283 ||||||||||| || |||||||||||||||| Sbjct: 100942 ggcgctggtgcactactacccgctcgccggc 100972
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 253 ggcgctggtgcccttctacccgctcgccggc 283 ||||||||||| || |||||||||||||||| Sbjct: 16385 ggcgctggtgcactactacccgctcgccggc 16415
>dbj|AP004132.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1089_A02 Length = 117908 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 48054 ccttctacccgctcgccggccgc 48076
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 tctacccgctcgccggccgcctc 289 ||||||||||||||||||||||| Sbjct: 156551 tctacccgctcgccggccgcctc 156529
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 314 gagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||||| |||| ||| ||||| Sbjct: 59331 gagatcgactgcaacggggaaggcgtgctgttcgt 59365
>dbj|AK105836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E12, full insert sequence Length = 1511 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 249 ccttctacccgctcgccggccgc 271
>dbj|AK104319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-E04, full insert sequence Length = 1671 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 314 gagatcgactgcaacggggagggcgcgctcttcgt 348 |||||||||||||||||||| |||| ||| ||||| Sbjct: 369 gagatcgactgcaacggggaaggcgtgctgttcgt 403
>dbj|AK103708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136O19, full insert sequence Length = 1745 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 tctacccgctcgccggccgcctc 289 ||||||||||||||||||||||| Sbjct: 319 tctacccgctcgccggccgcctc 341
>dbj|AK073495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F12, full insert sequence Length = 1526 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 264 ccttctacccgctcgccggccgc 286 ||||||||||||||||||||||| Sbjct: 264 ccttctacccgctcgccggccgc 286
>dbj|AK071594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102H06, full insert sequence Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 253 ggcgctggtgcccttctacccgctcgccggc 283 ||||||||||| || |||||||||||||||| Sbjct: 249 ggcgctggtgcactactacccgctcgccggc 279
>ref|XM_483799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1710 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgc 286 |||||||||||||||||||||| Sbjct: 314 cttctacccgctcgccggccgc 335
>ref|XM_479745.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1395 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgcctcg 290 |||||||||||| ||||||||||||| Sbjct: 225 cttctacccgctggccggccgcctcg 250
>ref|XM_472181.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1338 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgcctcg 290 |||||||||||| ||||||||||||| Sbjct: 225 cttctacccgctggccggccgcctcg 250
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 aggcgctggtgcccttctacccgctcgccggccg 285 ||||||| || | ||||||||||||||||||||| Sbjct: 70397 aggcgctcgtacacttctacccgctcgccggccg 70430
>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032M21 map C83B, complete sequence Length = 48636 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 cgccagcgacgtcgccgccgcc 208 |||||||||||||||||||||| Sbjct: 25096 cgccagcgacgtcgccgccgcc 25117
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 cgccagcgacgtcgccgccgcc 208 |||||||||||||||||||||| Sbjct: 142753 cgccagcgacgtcgccgccgcc 142774
>ref|XM_754322.1| Ustilago maydis 521 hypothetical protein (UM03268.1) partial mRNA Length = 2427 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 183 acagcgccagcgacgtcgccgccgccaacg 212 |||||| |||||||| |||||||||||||| Sbjct: 2369 acagcgacagcgacgccgccgccgccaacg 2398
>gb|AE012373.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 281 of 460 of the complete genome Length = 10029 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 277 cgccggccgcctcggtgcggatcgtg 302 |||||||||||||||||| ||||||| Sbjct: 1335 cgccggccgcctcggtgccgatcgtg 1310
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 210 acggcttcttcaacgtggccaa 231 |||||||||||||||||||||| Sbjct: 15712 acggcttcttcaacgtggccaa 15733
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 277 cgccggccgcctcggtgcggatcgtg 302 |||||||||||||||||| ||||||| Sbjct: 1813015 cgccggccgcctcggtgccgatcgtg 1813040
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 517 cgcggtggacggcgccagcgcg 538 |||||||||||||||||||||| Sbjct: 26303455 cgcggtggacggcgccagcgcg 26303476
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 aggcgctggtgcccttctacccgctcgccggccg 285 ||||||| || | ||||||||||||||||||||| Sbjct: 14439689 aggcgctcgtacacttctacccgctcgccggccg 14439722 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 18355727 gacgtcgccgccgccaactgcttc 18355750
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 517 cgcggtggacggcgccagcgcg 538 |||||||||||||||||||||| Sbjct: 78083 cgcggtggacggcgccagcgcg 78104
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 517 cgcggtggacggcgccagcgcg 538 |||||||||||||||||||||| Sbjct: 23033 cgcggtggacggcgccagcgcg 23054
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgc 286 |||||||||||||||||||||| Sbjct: 155270 cttctacccgctcgccggccgc 155249
>dbj|AK109443.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A03, full insert sequence Length = 1649 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgc 286 |||||||||||||||||||||| Sbjct: 289 cttctacccgctcgccggccgc 310
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgc 286 |||||||||||||||||||||| Sbjct: 41248 cttctacccgctcgccggccgc 41227
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgcctcg 290 |||||||||||| ||||||||||||| Sbjct: 54976 cttctacccgctggccggccgcctcg 54951
>dbj|AK108190.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C01, full insert sequence Length = 1212 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 cgccagcgacgtcgccgccgcc 208 |||||||||||||||||||||| Sbjct: 656 cgccagcgacgtcgccgccgcc 677
>dbj|AK063515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G07, full insert sequence Length = 2418 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 cttctacccgctcgccggccgc 286 |||||||||||||||||||||| Sbjct: 371 cttctacccgctcgccggccgc 392
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 cttctacccgctcgccggccgcctcg 290 |||||||||||| ||||||||||||| Sbjct: 105102 cttctacccgctggccggccgcctcg 105077
>dbj|AB242295.1| Balanus albicostatus balcp19k mRNA for cement protein-19k, partial cds Length = 881 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 ccgccgccaacggcttcttcaa 222 |||||||||||||||||||||| Sbjct: 191 ccgccgccaacggcttcttcaa 212
>gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, complete sequence Length = 211878 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 acagaggccacacccctctcg 173 ||||||||||||||||||||| Sbjct: 187790 acagaggccacacccctctcg 187810
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gctggacctggtgctggccaa 153 ||||||||||||||||||||| Sbjct: 83963 gctggacctggtgctggccaa 83943
>dbj|AB224799.1| Aspergillus oryzae cDNA, contig sequence: AoEST1649 Length = 912 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 gaagtccatggcgaaggcgctggtg 262 ||||||||||||| ||||||||||| Sbjct: 844 gaagtccatggcgcaggcgctggtg 868
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 gaagtccatggcgaaggcgctggtg 262 ||||||||||||| ||||||||||| Sbjct: 1592160 gaagtccatggcgcaggcgctggtg 1592136
>dbj|AB076981.1| Avena sativa AsHHT2 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 2, complete cds Length = 1770 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 tggcgaaggcgctggtgcccttctacccg 274 ||||| ||||||||||| ||||||||||| Sbjct: 341 tggcggaggcgctggtgaccttctacccg 369
>gb|AC133520.4| Mus musculus BAC clone RP23-185G9 from 8, complete sequence Length = 201054 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 acagaggccacacccctctcg 173 ||||||||||||||||||||| Sbjct: 193743 acagaggccacacccctctcg 193723
>gb|AC161045.2| Mus musculus BAC clone RP24-326E14 from chromosome 13, complete sequence Length = 150469 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ggaagggctctggctctcgg 131 |||||||||||||||||||| Sbjct: 64066 ggaagggctctggctctcgg 64085
>ref|NM_190065.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1530 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccagcgacgtcgccgccgccaacg 212 |||||| ||||||||||||||||| Sbjct: 95 ccagcgtcgtcgccgccgccaacg 118
>ref|XM_470860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 834 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 624 gacgtcgccgccgccaaccgcttc 601
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 69181 gacgtcgccgccgccaaccgcttc 69204
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 148939 gacgtcgccgccgccaactgcttc 148962
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 15807381 gacgtcgccgccgccaaccgcttc 15807404
>ref|XM_504095.1| Yarrowia lipolytica CLIB122, YALI0E18216g predicted mRNA Length = 969 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gctggacctggtgctggcca 152 |||||||||||||||||||| Sbjct: 744 gctggacctggtgctggcca 763
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0016O23, complete sequence Length = 149400 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgccagcgacgtcgccgccg 206 |||||||||||||||||||| Sbjct: 90180 cgccagcgacgtcgccgccg 90161
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ctcgccggccgcctcggtgc 294 |||||||||||||||||||| Sbjct: 235604 ctcgccggccgcctcggtgc 235585
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 cggcgctggacctggtgctggcca 152 |||||||||||||| ||||||||| Sbjct: 67830 cggcgctggacctgctgctggcca 67853
>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of glycopeptide antibiotic teicoplanin Length = 89713 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 cggcgctggacctggtgctggcca 152 |||||||||||||| ||||||||| Sbjct: 74453 cggcgctggacctgctgctggcca 74476
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cgccagcgacgtcgccgccg 206 |||||||||||||||||||| Sbjct: 419254 cgccagcgacgtcgccgccg 419273
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cagcgccagcgacgtcgccg 203 |||||||||||||||||||| Sbjct: 2211524 cagcgccagcgacgtcgccg 2211543
>dbj|AK086271.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930017K02 product:unclassifiable, full insert sequence Length = 2771 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ggaagggctctggctctcgg 131 |||||||||||||||||||| Sbjct: 2513 ggaagggctctggctctcgg 2532
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 15801915 gacgtcgccgccgccaaccgcttc 15801938
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ccagcgacgtcgccgccgccaacg 212 |||||| ||||||||||||||||| Sbjct: 4111 ccagcgtcgtcgccgccgccaacg 4088
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gctctcggcgctggacctggtgct 147 ||||||||||| |||||||||||| Sbjct: 3948302 gctctcggcgcaggacctggtgct 3948325
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 gcgccagcgacgtcgccgccgcca 209 ||||||||| |||||||||||||| Sbjct: 34966 gcgccagcgtcgtcgccgccgcca 34989
>dbj|AK120906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H21, full insert sequence Length = 1714 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 608 gacgtcgccgccgccaaccgcttc 585
>dbj|AK120483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112K02, full insert sequence Length = 2656 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 562 gacgtcgccgccgccaaccgcttc 539
>dbj|AK111027.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H05, full insert sequence Length = 668 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccagcgacgtcgccgccgccaacg 212 |||||| ||||||||||||||||| Sbjct: 160 ccagcgtcgtcgccgccgccaacg 183
>dbj|AK107072.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-E12, full insert sequence Length = 1804 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccagcgacgtcgccgccgccaacg 212 |||||| ||||||||||||||||| Sbjct: 162 ccagcgtcgtcgccgccgccaacg 185
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ccgctcgccggccgcctcgg 291 |||||||||||||||||||| Sbjct: 1569580 ccgctcgccggccgcctcgg 1569599
>dbj|AK066081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053A14, full insert sequence Length = 1977 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gacgtcgccgccgccaacggcttc 217 |||||||||||||||||| ||||| Sbjct: 871 gacgtcgccgccgccaaccgcttc 848
>gb|AY109546.1| Zea mays CL531_1 mRNA sequence Length = 1701 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gacggccgcaacgagatcgactgcaacg 329 ||||||||| ||||||||||||||||| Sbjct: 397 gacggccgcgtcgagatcgactgcaacg 424
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 acagcgccagcgacgtcgccgccg 206 ||||||||||||||| |||||||| Sbjct: 3262628 acagcgccagcgacgacgccgccg 3262605 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 acagcgccagcgacgtcgccgccg 206 ||||||||||||||| |||||||| Sbjct: 3261267 acagcgccagcgacgacgccgccg 3261244
>emb|CT010486.13| Mouse DNA sequence from clone RP23-129J22 on chromosome 13, complete sequence Length = 199574 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ggaagggctctggctctcgg 131 |||||||||||||||||||| Sbjct: 64735 ggaagggctctggctctcgg 64754
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gctggacctggtgctggcca 152 |||||||||||||||||||| Sbjct: 2172300 gctggacctggtgctggcca 2172319
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 tccatggcgaaggcgctggtgccc 265 ||||||||||||||| |||||||| Sbjct: 2190259 tccatggcgaaggcgatggtgccc 2190236
>emb|AL589902.18| Mouse DNA sequence from clone RP23-108D12 on chromosome 2, complete sequence Length = 200325 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 caggtggtagagtcttgcct 84 |||||||||||||||||||| Sbjct: 84410 caggtggtagagtcttgcct 84391
>emb|AL603664.16| Mouse DNA sequence from clone RP23-247J12 on chromosome 11, complete sequence Length = 158098 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 caggtggtagagtcttgcct 84 |||||||||||||||||||| Sbjct: 117611 caggtggtagagtcttgcct 117592 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,399,860 Number of Sequences: 3902068 Number of extensions: 3399860 Number of successful extensions: 70106 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67210 Number of HSP's gapped (non-prelim): 2892 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
