ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart25a01 |
|---|---|
| Clone Library Name | barley_pub |
>MSBP1_ARATH (Q9XFM6) Membrane steroid-binding protein 1 (AtMP1)| Length = 220 Score = 179 bits (455), Expect = 4e-45 Identities = 95/151 (62%), Positives = 104/151 (68%), Gaps = 5/151 (3%) Frame = +2 Query: 110 ELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXXXX 289 ELW+TLK+AI AYTGLSP +Y V+SG FA Sbjct: 4 ELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEE 63 Query: 290 X-----VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKD 454 VQ+GE+ EEEL+QYDGSDP+KPLLMAIK QIYDVTQSRMFYGPGGPYALFAGKD Sbjct: 64 PPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKD 123 Query: 455 ASRALAKMSFEPQDLNGDTSGLGPFELDALQ 547 ASRALAKMSFE +DL D SGLGPFELDALQ Sbjct: 124 ASRALAKMSFEEKDLTWDVSGLGPFELDALQ 154
>SBP2_ARATH (Q9M2Z4) Putative steroid binding protein 2 (AtMP2)| Length = 233 Score = 177 bits (448), Expect = 2e-44 Identities = 94/149 (63%), Positives = 102/149 (68%), Gaps = 1/149 (0%) Frame = +2 Query: 104 VAELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXX 283 V ++WETLK+ I AYTGLSP +Y VVSG F Sbjct: 2 VQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP 61 Query: 284 XXX-VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDAS 460 VQLGE+ EEEL+ YDGSD KKPLLMAIKGQIYDV+QSRMFYGPGGPYALFAGKDAS Sbjct: 62 LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDAS 121 Query: 461 RALAKMSFEPQDLNGDTSGLGPFELDALQ 547 RALAKMSFE QDL GD SGLG FEL+ALQ Sbjct: 122 RALAKMSFEDQDLTGDISGLGAFELEALQ 150
>NENF_MOUSE (Q9CQ45) Neudesin precursor (Neuron-derived neurotrophic factor)| (Secreted protein of unknown function) (SPUF protein) Length = 171 Score = 87.0 bits (214), Expect = 3e-17 Identities = 40/77 (51%), Positives = 54/77 (70%) Frame = +2 Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY AGKD+SR +AKMS +P Sbjct: 48 EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107 Query: 494 DLNGDTSGLGPFELDAL 544 DL DT+GL EL+AL Sbjct: 108 DLTHDTTGLTAKELEAL 124
>SBP3_ARATH (Q9SK39) Putative steroid-binding protein 3 (AtMP3)| Length = 100 Score = 86.3 bits (212), Expect = 5e-17 Identities = 40/80 (50%), Positives = 56/80 (70%) Frame = +2 Query: 305 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 484 E E+L QY+G+D KP+ +AIKG+++DVT + FYG GG Y++FAGKDASRAL KMS Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61 Query: 485 EPQDLNGDTSGLGPFELDAL 544 +D++ GL E++ L Sbjct: 62 NEEDVSPSLEGLTEKEINTL 81
>NENF_RAT (Q6IUR5) Neudesin precursor (Neuron-derived neurotrophic factor)| (Spinal cord injury-related protein 10) (SCIRP10-related protein) Length = 171 Score = 86.3 bits (212), Expect = 5e-17 Identities = 40/77 (51%), Positives = 53/77 (68%) Frame = +2 Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY AGKD+SR +AKMS +P Sbjct: 48 EEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107 Query: 494 DLNGDTSGLGPFELDAL 544 DL D SGL EL+AL Sbjct: 108 DLTHDISGLTAKELEAL 124
>NENF_HUMAN (Q9UMX5) Neudesin precursor (Neuron-derived neurotrophic factor)| (Secreted protein of unknown function) (SPUF protein) Length = 172 Score = 84.3 bits (207), Expect = 2e-16 Identities = 38/77 (49%), Positives = 53/77 (68%) Frame = +2 Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY GKD++R +AKMS +P Sbjct: 49 EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPA 108 Query: 494 DLNGDTSGLGPFELDAL 544 DL DT+GL EL+AL Sbjct: 109 DLTHDTTGLTAKELEAL 125
>PGRC1_RAT (P70580) Membrane-associated progesterone receptor component 1| (Acidic 25 kDa protein) (25-DX) Length = 194 Score = 72.0 bits (175), Expect = 1e-12 Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%) Frame = +2 Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 ELR+YDG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 497 LN---GDTSGLGPFELDAL 544 L D S L P + + L Sbjct: 134 LKDEYDDLSDLTPAQQETL 152
>PGRC1_PIG (Q95250) Membrane-associated progesterone receptor component 1| Length = 193 Score = 70.5 bits (171), Expect = 3e-12 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 4/79 (5%) Frame = +2 Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 75 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 132 Query: 497 LN---GDTSGLGPFELDAL 544 L D S L P + + L Sbjct: 133 LKDEYDDLSDLTPAQQETL 151
>PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor component 2| (Progesterone membrane-binding protein) (Steroid receptor protein DG6) Length = 223 Score = 70.5 bits (171), Expect = 3e-12 Identities = 35/77 (45%), Positives = 51/77 (66%) Frame = +2 Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 E+LRQYDGS + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 106 EQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164 Query: 497 LNGDTSGLGPFELDALQ 547 L + L +L+A+Q Sbjct: 165 LRDEYDDLS--DLNAVQ 179
>PGRC1_MOUSE (O55022) Membrane-associated progesterone receptor component 1| Length = 194 Score = 70.5 bits (171), Expect = 3e-12 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 4/79 (5%) Frame = +2 Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 497 LN---GDTSGLGPFELDAL 544 L D S L P + + L Sbjct: 134 LKDEYDDLSDLTPAQQETL 152
>PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor component 2| (Fragment) Length = 214 Score = 69.7 bits (169), Expect = 5e-12 Identities = 34/77 (44%), Positives = 51/77 (66%) Frame = +2 Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 E+LRQYDG+ + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 97 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 155 Query: 497 LNGDTSGLGPFELDALQ 547 L + L +L+A+Q Sbjct: 156 LRDEYDDLS--DLNAVQ 170
>PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor component 2| Length = 217 Score = 69.7 bits (169), Expect = 5e-12 Identities = 34/77 (44%), Positives = 51/77 (66%) Frame = +2 Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 E+LRQYDG+ + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 100 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 158 Query: 497 LNGDTSGLGPFELDALQ 547 L + L +L+A+Q Sbjct: 159 LRDEYDDLS--DLNAVQ 173
>PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor component 1| (mPR) Length = 194 Score = 68.9 bits (167), Expect = 9e-12 Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Frame = +2 Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 497 LNGDTSGL 520 L + L Sbjct: 134 LKDEYDDL 141
>YL81_SCHPO (O13995) Hypothetical protein C25B8.01 in chromosome I| Length = 166 Score = 64.7 bits (156), Expect = 2e-10 Identities = 31/58 (53%), Positives = 41/58 (70%) Frame = +2 Query: 320 ELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493 EL++Y+GS + +AIKG +Y+VT FYGP GPY+ FAG DASR LAK SF+ + Sbjct: 47 ELKEYNGSK-NSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDE 103
>DAP1_YEAST (Q12091) Damage response protein 1| Length = 152 Score = 63.2 bits (152), Expect = 5e-10 Identities = 31/65 (47%), Positives = 42/65 (64%) Frame = +2 Query: 293 VQLGEVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALA 472 V G L +++G D +K + +AI+G++YD T+ R FYGP GPY FAG DASR LA Sbjct: 39 VVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLA 97 Query: 473 KMSFE 487 SF+ Sbjct: 98 LNSFD 102
>GLPK_XANCP (Q8PDI0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 32.3 bits (72), Expect = 0.90 Identities = 24/77 (31%), Positives = 35/77 (45%) Frame = +2 Query: 305 EVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 484 E D E L D P + + ++Y +TQ++ FYG P A AG + + F Sbjct: 198 EWDAELLEMLDVPAQMLPEVRS-SSEVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACF 256 Query: 485 EPQDLNGDTSGLGPFEL 535 EP + +T G G F L Sbjct: 257 EP-GMAKNTYGTGCFML 272
>GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 32.0 bits (71), Expect = 1.2 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPFEL 535 ++Y +TQ++ FYG P A AG + + FEP + +T G G F L Sbjct: 222 EVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACFEP-GMAKNTYGTGCFML 272
>Y3770_BACSK (Q5WBF8) UPF0271 protein ABC3770| Length = 253 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 332 YDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDT 511 Y+ + + L AI +YDV + +FYG G + AGK A A F + D Sbjct: 116 YNMAAADQALAEAIANAVYDVDPNLVFYGLAGSALIAAGKKAGLKTASEVFADRTYQADG 175 Query: 512 S 514 S Sbjct: 176 S 176
>GLPK_ENTFA (O34154) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 500 Score = 31.6 bits (70), Expect = 1.5 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 529 ++Y +T++ FYG P A AG + +M+FEP + +T G G F Sbjct: 221 EVYGLTKNYHFYGSEVPIAGMAGDQQAALFGQMAFEP-GMVKNTYGTGSF 269
>GLPK_LACLA (Q9CG64) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 498 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 529 ++Y VT+ F+G P + AG + +M+FEP + +T G G F Sbjct: 223 EVYGVTKGFHFFGSEVPISGMAGDQQAALFGQMAFEPGMIK-NTYGTGSF 271
>GLPK_XYLFT (Q87BZ2) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPFEL 535 +IY +TQ+ F+G P A AG + + FEP + +T G G F L Sbjct: 222 EIYGLTQTPYFHGEQIPIAGIAGDQQAALFGQACFEP-GMAKNTYGTGCFML 272
>GLPK2_LACPL (Q88YD9) Glycerol kinase 2 (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase 2) (Glycerokinase 2) (GK 2) Length = 508 Score = 28.9 bits (63), Expect = 10.0 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 529 +IY T+ + YG P + AG + +M+FEP + +T G G F Sbjct: 222 EIYGTTKDYLLYGSQIPISGMAGDQQAALFGQMAFEP-GMVKNTYGTGAF 270
>GLPK_ENTCA (O34153) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 505 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 529 ++Y T+S FYG P A AG + +M+FE + + +T G G F Sbjct: 222 EVYGHTRSYHFYGSEVPIAGMAGDQQAALFGQMAFE-KGMIKNTYGTGAF 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,933,605 Number of Sequences: 219361 Number of extensions: 923252 Number of successful extensions: 2890 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 2801 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2884 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
