ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart24h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 464 e-127
2gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 464 e-127
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 464 e-127
4dbj|AK064707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 464 e-127
5ref|NM_194925.1| Oryza sativa (japonica cultivar-group) unknown ... 111 2e-21
6gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
7gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
9dbj|AK108770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
10gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
11gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, co... 44 0.47
12gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, co... 44 0.47
13gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosom... 42 1.9
14gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 m... 42 1.9
15dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
16gb|AC007681.3| Homo sapiens BAC clone RP11-355F16 from 2, comple... 42 1.9
17dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18emb|CT025871.10| Mouse DNA sequence from clone RP24-324L15 on ch... 42 1.9
19ref|XM_526649.1| PREDICTED: Pan troglodytes similar to cytochrom... 40 7.3
20gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
21gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
22gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, comp... 40 7.3
23gb|AC092241.2| Drosophila melanogaster clone BACR09F02, complete... 40 7.3
24gb|AY343323.1| Homo sapiens cytochrome P450 mRNA, complete cds 40 7.3
25ref|NM_183075.2| Homo sapiens cytochrome P450, family 2, subfami... 40 7.3
26gb|BC012027.1| Homo sapiens cytochrome P450, family 2, subfamily... 40 7.3
27gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosom... 40 7.3
28gb|AC091652.4| Homo sapiens BAC clone RP11-26I6 from 7, complete... 40 7.3
29gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 7.3
30emb|AL513166.7| Human DNA sequence from clone RP11-261J10 on chr... 40 7.3
31gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence 40 7.3
32emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 7.3
33emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 7.3
34gb|AC009812.17| Homo sapiens chromosome 8, clone RP11-48B3, comp... 40 7.3
35gb|AC096564.3| Homo sapiens BAC clone RP11-286E11 from 4, comple... 40 7.3
36gb|AC160246.2| Mus musculus BAC clone RP24-465F1 from chromosome... 40 7.3
37gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 7.3
38gb|AE004564.1| Pseudomonas aeruginosa PAO1, section 125 of 529 o... 40 7.3
39gb|AC023855.15| Homo sapiens chromosome 17, clone RP11-546M21, c... 40 7.3
40gb|AC034114.17| Homo sapiens chromosome 8, clone RP11-775E10, co... 40 7.3
41gb|AC007993.15|AC007993 Homo sapiens chromosome 17, clone RP11-5... 40 7.3
42gb|AC006073.1|AC006073 Drosophila melanogaster, chromosome 2L, r... 40 7.3
43gb|AE003631.4| Drosophila melanogaster chromosome 2L, section 40... 40 7.3 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  464 bits (234), Expect = e-127
 Identities = 384/434 (88%)
 Strand = Plus / Minus

                                                                           
Query: 108     tcctcccttcccacgccacagcgacggcgccaaccggcatgcttgagcgggaaaccaagc 167
               |||||||||  |||||||| |||||| |||| || |||| | |  ||||||| || ||||
Sbjct: 7652273 tcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagc 7652214

                                                                           
Query: 168     agcaaatcttggcgagcatcccgccgcactggcaggagaaccccgtgttgttcctgacgt 227
               |||| ||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 7652213 agcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgt 7652154

                                                                           
Query: 228     cgccgtccggcaagtacgcggcgcacttcatgcgcagccagaccgtgccgggcgccggcg 287
               ||||||| ||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 7652153 cgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcg 7652094

                                                                           
Query: 288     gcctcggagccgacttctgctacgtcgagattctccacaccaccgagccgggcgcggagg 347
               ||||||| ||||||||||||||||| ||| | ||| ||||| | || || ||||||||||
Sbjct: 7652093 gcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggagg 7652034

                                                                           
Query: 348     ggcggagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcg 407
               |||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||
Sbjct: 7652033 ggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcg 7651974

                                                                           
Query: 408     tgttctcgtggaaagggctggaggtgttcgacgggagcaactctgtgtggcacacacacg 467
               ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 7651973 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacg 7651914

                                                                           
Query: 468     acacggaatcagtcgacaacaacttcctcaaaaccctgcagctcgtggacgagggtgaca 527
               ||||| | || | |  | | ||||||||| | || ||| |||| ||||||||||| ||||
Sbjct: 7651913 acacgcagtccgacagccagaacttcctcgagacgctggagctggtggacgagggcgaca 7651854

                             
Query: 528     tgcgcatcctcgac 541
               ||||||||||||||
Sbjct: 7651853 tgcgcatcctcgac 7651840
to top
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score =  464 bits (234), Expect = e-127
 Identities = 384/434 (88%)
 Strand = Plus / Plus

                                                                         
Query: 108   tcctcccttcccacgccacagcgacggcgccaaccggcatgcttgagcgggaaaccaagc 167
             |||||||||  |||||||| |||||| |||| || |||| | |  ||||||| || ||||
Sbjct: 63017 tcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagc 63076

                                                                         
Query: 168   agcaaatcttggcgagcatcccgccgcactggcaggagaaccccgtgttgttcctgacgt 227
             |||| ||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 63077 agcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgt 63136

                                                                         
Query: 228   cgccgtccggcaagtacgcggcgcacttcatgcgcagccagaccgtgccgggcgccggcg 287
             ||||||| ||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 63137 cgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcg 63196

                                                                         
Query: 288   gcctcggagccgacttctgctacgtcgagattctccacaccaccgagccgggcgcggagg 347
             ||||||| ||||||||||||||||| ||| | ||| ||||| | || || ||||||||||
Sbjct: 63197 gcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggagg 63256

                                                                         
Query: 348   ggcggagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcg 407
             |||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||
Sbjct: 63257 ggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcg 63316

                                                                         
Query: 408   tgttctcgtggaaagggctggaggtgttcgacgggagcaactctgtgtggcacacacacg 467
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 63317 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacg 63376

                                                                         
Query: 468   acacggaatcagtcgacaacaacttcctcaaaaccctgcagctcgtggacgagggtgaca 527
             ||||| | || | |  | | ||||||||| | || ||| |||| ||||||||||| ||||
Sbjct: 63377 acacgcagtccgacagccagaacttcctcgagacgctggagctggtggacgagggcgaca 63436

                           
Query: 528   tgcgcatcctcgac 541
             ||||||||||||||
Sbjct: 63437 tgcgcatcctcgac 63450
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  464 bits (234), Expect = e-127
 Identities = 384/434 (88%)
 Strand = Plus / Minus

                                                                           
Query: 108     tcctcccttcccacgccacagcgacggcgccaaccggcatgcttgagcgggaaaccaagc 167
               |||||||||  |||||||| |||||| |||| || |||| | |  ||||||| || ||||
Sbjct: 7650108 tcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagc 7650049

                                                                           
Query: 168     agcaaatcttggcgagcatcccgccgcactggcaggagaaccccgtgttgttcctgacgt 227
               |||| ||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 7650048 agcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgt 7649989

                                                                           
Query: 228     cgccgtccggcaagtacgcggcgcacttcatgcgcagccagaccgtgccgggcgccggcg 287
               ||||||| ||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 7649988 cgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcg 7649929

                                                                           
Query: 288     gcctcggagccgacttctgctacgtcgagattctccacaccaccgagccgggcgcggagg 347
               ||||||| ||||||||||||||||| ||| | ||| ||||| | || || ||||||||||
Sbjct: 7649928 gcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggagg 7649869

                                                                           
Query: 348     ggcggagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcg 407
               |||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||
Sbjct: 7649868 ggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcg 7649809

                                                                           
Query: 408     tgttctcgtggaaagggctggaggtgttcgacgggagcaactctgtgtggcacacacacg 467
               ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 7649808 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacg 7649749

                                                                           
Query: 468     acacggaatcagtcgacaacaacttcctcaaaaccctgcagctcgtggacgagggtgaca 527
               ||||| | || | |  | | ||||||||| | || ||| |||| ||||||||||| ||||
Sbjct: 7649748 acacgcagtccgacagccagaacttcctcgagacgctggagctggtggacgagggcgaca 7649689

                             
Query: 528     tgcgcatcctcgac 541
               ||||||||||||||
Sbjct: 7649688 tgcgcatcctcgac 7649675
to top
>dbj|AK064707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A07, full
           insert sequence
          Length = 1269

 Score =  464 bits (234), Expect = e-127
 Identities = 384/434 (88%)
 Strand = Plus / Plus

                                                                       
Query: 108 tcctcccttcccacgccacagcgacggcgccaaccggcatgcttgagcgggaaaccaagc 167
           |||||||||  |||||||| |||||| |||| || |||| | |  ||||||| || ||||
Sbjct: 163 tcctcccttggcacgccacggcgacgtcgccgacgggcacgatacagcgggagacgaagc 222

                                                                       
Query: 168 agcaaatcttggcgagcatcccgccgcactggcaggagaaccccgtgttgttcctgacgt 227
           |||| ||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 223 agcagatcctggccagcatcccgccgcactggcaggagaacccggtgctgttcctgacgt 282

                                                                       
Query: 228 cgccgtccggcaagtacgcggcgcacttcatgcgcagccagaccgtgccgggcgccggcg 287
           ||||||| ||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct: 283 cgccgtcgggcaagtacacggcgtacttcctgcgcagccagaccgcgccgggcgccggcg 342

                                                                       
Query: 288 gcctcggagccgacttctgctacgtcgagattctccacaccaccgagccgggcgcggagg 347
           ||||||| ||||||||||||||||| ||| | ||| ||||| | || || ||||||||||
Sbjct: 343 gcctcggcgccgacttctgctacgtggaggtgctcgacacctcggatcccggcgcggagg 402

                                                                       
Query: 348 ggcggagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcg 407
           |||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||
Sbjct: 403 ggcggagcgtgtgggagtcggagtgcctggcggtgagcaccgtgaacacgtgctcgctcg 462

                                                                       
Query: 408 tgttctcgtggaaagggctggaggtgttcgacgggagcaactctgtgtggcacacacacg 467
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 463 tgttctcgtggaaagggctggaggtgttcgacgggagcaactcggtgtggcacacccacg 522

                                                                       
Query: 468 acacggaatcagtcgacaacaacttcctcaaaaccctgcagctcgtggacgagggtgaca 527
           ||||| | || | |  | | ||||||||| | || ||| |||| ||||||||||| ||||
Sbjct: 523 acacgcagtccgacagccagaacttcctcgagacgctggagctggtggacgagggcgaca 582

                         
Query: 528 tgcgcatcctcgac 541
           ||||||||||||||
Sbjct: 583 tgcgcatcctcgac 596
to top
>ref|NM_194925.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNAa0034B05.10), mRNA
          Length = 1125

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                       
Query: 209 cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 268
           |||||| ||||||| || |||||||||||||||||||||||| ||||| |||||   || 
Sbjct: 157 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 216

                                                           
Query: 269 accgtgccgggcgccggcggcctcggagccgacttctgctacgtcgag 316
           ||||| || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 217 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 264



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 352 gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 411
           ||||||||||||||||||||||  | |||||||||| |||||||| ||| | ||  | ||
Sbjct: 321 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 380

                                         
Query: 412 ctcgtggaaagggctggaggtgttcgacgg 441
           ||||||| | ||||||||||||||||||||
Sbjct: 381 ctcgtggcacgggctggaggtgttcgacgg 410
to top
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0004E08, complete sequence
          Length = 158294

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                         
Query: 209   cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 268
             |||||| ||||||| || |||||||||||||||||||||||| ||||| |||||   || 
Sbjct: 33196 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 33255

                                                             
Query: 269   accgtgccgggcgccggcggcctcggagccgacttctgctacgtcgag 316
             ||||| || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 33256 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 33303



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                         
Query: 352   gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 411
             ||||||||||||||||||||||  | |||||||||| |||||||| ||| | ||  | ||
Sbjct: 33360 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 33419

                                           
Query: 412   ctcgtggaaagggctggaggtgttcgacgg 441
             ||||||| | ||||||||||||||||||||
Sbjct: 33420 ctcgtggcacgggctggaggtgttcgacgg 33449
to top
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0034B05, complete sequence
          Length = 125655

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                         
Query: 209   cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 268
             |||||| ||||||| || |||||||||||||||||||||||| ||||| |||||   || 
Sbjct: 98851 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 98910

                                                             
Query: 269   accgtgccgggcgccggcggcctcggagccgacttctgctacgtcgag 316
             ||||| || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 98911 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 98958



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                         
Query: 352   gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 411
             ||||||||||||||||||||||  | |||||||||| |||||||| ||| | ||  | ||
Sbjct: 99015 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 99074

                                           
Query: 412   ctcgtggaaagggctggaggtgttcgacgg 441
             ||||||| | ||||||||||||||||||||
Sbjct: 99075 ctcgtggcacgggctggaggtgttcgacgg 99104
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                           
Query: 209     cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 268
               |||||| ||||||| || |||||||||||||||||||||||| ||||| |||||   || 
Sbjct: 3442067 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 3442126

                                                               
Query: 269     accgtgccgggcgccggcggcctcggagccgacttctgctacgtcgag 316
               ||||| || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 3442127 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 3442174



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                           
Query: 352     gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 411
               ||||||||||||||||||||||  | |||||||||| |||||||| ||| | ||  | ||
Sbjct: 3442231 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 3442290

                                             
Query: 412     ctcgtggaaagggctggaggtgttcgacgg 441
               ||||||| | ||||||||||||||||||||
Sbjct: 3442291 ctcgtggcacgggctggaggtgttcgacgg 3442320
to top
>dbj|AK108770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H05, full
           insert sequence
          Length = 1436

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                       
Query: 209 cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 268
           |||||| ||||||| || |||||||||||||||||||||||| ||||| |||||   || 
Sbjct: 231 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 290

                                                           
Query: 269 accgtgccgggcgccggcggcctcggagccgacttctgctacgtcgag 316
           ||||| || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 291 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 338



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                       
Query: 352 gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 411
           ||||||||||||||||||||||  | |||||||||| |||||||| ||| | ||  | ||
Sbjct: 395 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 454

                                         
Query: 412 ctcgtggaaagggctggaggtgttcgacgg 441
           ||||||| | ||||||||||||||||||||
Sbjct: 455 ctcgtggcacgggctggaggtgttcgacgg 484
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                           
Query: 209     cccgtgttgttcctgacgtcgccgtccggcaagtacgcggcgcacttcatgcgcagccag 268
               |||||| ||||||| || |||||||||||||||||||||||| ||||| |||||   || 
Sbjct: 3441988 cccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctcgcac 3442047

                                                               
Query: 269     accgtgccgggcgccggcggcctcggagccgacttctgctacgtcgag 316
               ||||| || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 3442048 accgtccccggcgccggcgggctcggcgccgacttctgctacgtcgag 3442095



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                           
Query: 352     gagcgtgtgggagtcggagtgcttggcggtgagcaccgtgaacacctgcgcgctcgtgtt 411
               ||||||||||||||||||||||  | |||||||||| |||||||| ||| | ||  | ||
Sbjct: 3442152 gagcgtgtgggagtcggagtgccggccggtgagcacggtgaacacgtgcactctgctctt 3442211

                                             
Query: 412     ctcgtggaaagggctggaggtgttcgacgg 441
               ||||||| | ||||||||||||||||||||
Sbjct: 3442212 ctcgtggcacgggctggaggtgttcgacgg 3442241
to top
>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence
          Length = 189415

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 410    ttctcgtggaaagggctggagg 431
              ||||||||||||||||||||||
Sbjct: 150888 ttctcgtggaaagggctggagg 150909
to top
>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence
          Length = 178775

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 410    ttctcgtggaaagggctggagg 431
              ||||||||||||||||||||||
Sbjct: 167897 ttctcgtggaaagggctggagg 167876
to top
>gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosome 17, complete
             sequence
          Length = 190411

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 446   aactctgtgtggcacacacac 466
             |||||||||||||||||||||
Sbjct: 31157 aactctgtgtggcacacacac 31137
to top
>gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 map 17, complete
             sequence
          Length = 223005

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 446   aactctgtgtggcacacacac 466
             |||||||||||||||||||||
Sbjct: 51950 aactctgtgtggcacacacac 51970
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 353      agcgtgtgggagtcggagtgc 373
                |||||||||||||||||||||
Sbjct: 20753473 agcgtgtgggagtcggagtgc 20753493



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 227      tcgccgtccggcaagtacgcggcg 250
                ||||||||||||||| ||||||||
Sbjct: 19105371 tcgccgtccggcaagaacgcggcg 19105394
to top
>gb|AC007681.3| Homo sapiens BAC clone RP11-355F16 from 2, complete sequence
          Length = 147903

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    agaaccagctttagaagttgc 40
             |||||||||||||||||||||
Sbjct: 65708 agaaccagctttagaagttgc 65728
to top
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0569E11
          Length = 157319

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 353   agcgtgtgggagtcggagtgc 373
             |||||||||||||||||||||
Sbjct: 28502 agcgtgtgggagtcggagtgc 28522
to top
>emb|CT025871.10| Mouse DNA sequence from clone RP24-324L15 on chromosome 17, complete
             sequence
          Length = 154761

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 446   aactctgtgtggcacacacac 466
             |||||||||||||||||||||
Sbjct: 69953 aactctgtgtggcacacacac 69933
to top
>ref|XM_526649.1| PREDICTED: Pan troglodytes similar to cytochrome P450, family 2,
           subfamily U, polypeptide 1; cytochrome P450 P450TEC
           (LOC471267), mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 ccgggcgccggcggcctcgg 294
           ||||||||||||||||||||
Sbjct: 153 ccgggcgccggcggcctcgg 134
to top
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0019D02, complete sequence
          Length = 154692

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 227    tcgccgtccggcaagtacgcggcg 250
              ||||||||||||||| ||||||||
Sbjct: 150656 tcgccgtccggcaagaacgcggcg 150679
to top
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 227   tcgccgtccggcaagtacgcggcg 250
             ||||||||||||||| ||||||||
Sbjct: 35330 tcgccgtccggcaagaacgcggcg 35353
to top
>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence
          Length = 239688

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tcctcaaaaccctgcagctc 511
             ||||||||||||||||||||
Sbjct: 64121 tcctcaaaaccctgcagctc 64102
to top
>gb|AC092241.2| Drosophila melanogaster clone BACR09F02, complete sequence
          Length = 178190

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    caactctgtgtggcacacac 464
              ||||||||||||||||||||
Sbjct: 100227 caactctgtgtggcacacac 100246
to top
>gb|AY343323.1| Homo sapiens cytochrome P450 mRNA, complete cds
          Length = 3544

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 ccgggcgccggcggcctcgg 294
           ||||||||||||||||||||
Sbjct: 36  ccgggcgccggcggcctcgg 17
to top
>ref|NM_183075.2| Homo sapiens cytochrome P450, family 2, subfamily U, polypeptide 1
           (CYP2U1), mRNA
          Length = 4760

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 ccgggcgccggcggcctcgg 294
           ||||||||||||||||||||
Sbjct: 80  ccgggcgccggcggcctcgg 61
to top
>gb|BC012027.1| Homo sapiens cytochrome P450, family 2, subfamily U, polypeptide 1,
           mRNA (cDNA clone IMAGE:4706746), complete cds
          Length = 1576

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 275 ccgggcgccggcggcctcgg 294
           ||||||||||||||||||||
Sbjct: 56  ccgggcgccggcggcctcgg 37
to top
>gb|AC124399.4| Mus musculus BAC clone RP24-351I17 from chromosome 10, complete
             sequence
          Length = 179668

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   accaagcagcaaatcttggc 180
             ||||||||||||||||||||
Sbjct: 65919 accaagcagcaaatcttggc 65900
to top
>gb|AC091652.4| Homo sapiens BAC clone RP11-26I6 from 7, complete sequence
          Length = 44121

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  gtggaaagggctggaggtgt 434
            ||||||||||||||||||||
Sbjct: 6604 gtggaaagggctggaggtgt 6623
to top
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 222     tgacgtcgccgtccggcaag 241
               ||||||||||||||||||||
Sbjct: 3588099 tgacgtcgccgtccggcaag 3588118
to top
>emb|AL513166.7| Human DNA sequence from clone RP11-261J10 on chromosome 1, complete
             sequence
          Length = 170817

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    cagagacaccagaaccagct 29
             ||||||||||||||||||||
Sbjct: 48715 cagagacaccagaaccagct 48734
to top
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence
          Length = 338007

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     aaccccagcagcagccatgg 65
              ||||||||||||||||||||
Sbjct: 108692 aaccccagcagcagccatgg 108711
to top
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    tgccgggcgccggcggcctc 292
              ||||||||||||||||||||
Sbjct: 134081 tgccgggcgccggcggcctc 134062
to top
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    gccgggcgccggcggcctcg 293
              ||||||||||||||||||||
Sbjct: 151137 gccgggcgccggcggcctcg 151156
to top
>gb|AC009812.17| Homo sapiens chromosome 8, clone RP11-48B3, complete sequence
          Length = 155405

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    tgtttgtcctcccttcccac 121
              ||||||||||||||||||||
Sbjct: 139119 tgtttgtcctcccttcccac 139100
to top
>gb|AC096564.3| Homo sapiens BAC clone RP11-286E11 from 4, complete sequence
          Length = 163317

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    ccgggcgccggcggcctcgg 294
              ||||||||||||||||||||
Sbjct: 145085 ccgggcgccggcggcctcgg 145066
to top
>gb|AC160246.2| Mus musculus BAC clone RP24-465F1 from chromosome 9, complete sequence
          Length = 157105

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    gctttagaagttgcatccaa 46
             ||||||||||||||||||||
Sbjct: 63336 gctttagaagttgcatccaa 63317
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    gtcgacaacaacttcctcaa 498
              ||||||||||||||||||||
Sbjct: 535084 gtcgacaacaacttcctcaa 535103



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    gccgggcgcggaggggcgga 353
              ||||||||||||||||||||
Sbjct: 277635 gccgggcgcggaggggcgga 277654
to top
>gb|AE004564.1| Pseudomonas aeruginosa PAO1, section 125 of 529 of the complete
            genome
          Length = 10515

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 123  ccacagcgacggcgccaaccggca 146
            ||||| ||||||||||||||||||
Sbjct: 7483 ccacatcgacggcgccaaccggca 7506
to top
>gb|AC023855.15| Homo sapiens chromosome 17, clone RP11-546M21, complete sequence
          Length = 146219

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    cttcctcaaaaccctgcagc 509
              ||||||||||||||||||||
Sbjct: 141209 cttcctcaaaaccctgcagc 141190
to top
>gb|AC034114.17| Homo sapiens chromosome 8, clone RP11-775E10, complete sequence
          Length = 154210

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    tgtttgtcctcccttcccac 121
              ||||||||||||||||||||
Sbjct: 125494 tgtttgtcctcccttcccac 125513
to top
>gb|AC007993.15|AC007993 Homo sapiens chromosome 17, clone RP11-527L4, complete sequence
          Length = 141704

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 490  cttcctcaaaaccctgcagc 509
            ||||||||||||||||||||
Sbjct: 7223 cttcctcaaaaccctgcagc 7204
to top
>gb|AC006073.1|AC006073 Drosophila melanogaster, chromosome 2L, region 32D3-32E2, P1 clones
             DS05055 and DS02287, complete sequence
          Length = 94440

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   caactctgtgtggcacacac 464
             ||||||||||||||||||||
Sbjct: 25244 caactctgtgtggcacacac 25263
to top
>gb|AE003631.4| Drosophila melanogaster chromosome 2L, section 40 of 83 of the complete
              sequence
          Length = 256684

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    caactctgtgtggcacacac 464
              ||||||||||||||||||||
Sbjct: 145062 caactctgtgtggcacacac 145081


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,688,857
Number of Sequences: 3902068
Number of extensions: 3688857
Number of successful extensions: 74168
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73774
Number of HSP's gapped (non-prelim): 394
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top