>WWP1_MOUSE (Q8BZZ3) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-)|
           (WW domain-containing protein 1)
          Length = 918

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
 Frame = +2

Query: 107 RYEVEVTVGAARDLKNVNWRNGDLKPYAVLWIDAGARCSTRVDLDNGENPTWDDKVVVPL 286
           R +++VTV +A+  +  NW    +  Y  + +D   + + +    +  NP WD++++V +
Sbjct: 17  RLQLKVTVSSAKLKRKKNWFGTAI--YTEVIVDGEVKKTAKSS--SSSNPKWDEQLIVNV 72

Query: 287 PPASRLQDAVLYLDIVHANAPEGVKPLVGSARLPLR-XXXXXXXXXXKVSRNLKL 448
            P + L+  V     + A+A      L+G A + L+           KV   LKL
Sbjct: 73  TPQTTLEFRVWSHHTLKADA------LLGKATVDLKQVLLTHNRKLEKVKEQLKL 121

>PROB_GLUOX (Q5FUL1) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 378

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 65  HHPSKTKDKAKMGSRYEVEVTVGAARDLKNVNWRNGDLKPYAVLWIDAGAR 217
           HHP +      + + +  +   G+AR      W  G L+P   L IDAGAR
Sbjct: 249 HHPLRRLQNGGLCTWFMAQTDAGSARK----RWIGGSLQPKGTLTIDAGAR 295

>DNAA_STRRE (Q9ZH76) Chromosomal replication initiator protein dnaA|
          Length = 643

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 455 PSGRPQGKLDVRVAVREPARYYDPNPGAYPAPA 553
           PS RP     VR A   P+ Y+ P PGA+P PA
Sbjct: 144 PSARPDQLPTVRPAY--PSEYHRPEPGAWPRPA 174

>YLZ5_CAEEL (P34418) Hypothetical protein F42H10.5|
          Length = 810

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +2

Query: 71  PSKTKDKAKMGSRYEVEVTVGA-ARDLKNVNWRNGDLKPYAVLWIDAGARCSTRVDLDNG 247
           P+ T   A + +  +  +T+ A  + +++  WRN D K   +    A A  ++ VD +  
Sbjct: 245 PTPTSSNAGLNALQQAGLTLAANGQIIQSKKWRNDDKKQKELCTKFALALATSHVDFEVV 304

Query: 248 ENPTWDDKVVVPLPPAS 298
           +NP W +   +  P  S
Sbjct: 305 QNPLWKEVFEMAQPKFS 321

>WWP1_HUMAN (Q9H0M0) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-)|
           (WW domain-containing protein 1) (Atropin-1-interacting
           protein 5) (AIP5)
          Length = 922

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/96 (23%), Positives = 45/96 (46%)
 Frame = +2

Query: 107 RYEVEVTVGAARDLKNVNWRNGDLKPYAVLWIDAGARCSTRVDLDNGENPTWDDKVVVPL 286
           R +++VTV +A+  +  NW    +  Y  + +D     +      +  NP WD+++ V +
Sbjct: 17  RLQLQVTVSSAKLKRKKNWFGTAI--YTEVVVDG--EITKTAKSSSSSNPKWDEQLTVNV 72

Query: 287 PPASRLQDAVLYLDIVHANAPEGVKPLVGSARLPLR 394
            P + L+  V     + A+A      L+G A + L+
Sbjct: 73  TPQTTLEFQVWSHRTLKADA------LLGKATIDLK 102

>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD|
           delta)
          Length = 868

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 182 PYAVLWIDAGARCSTRVDLDNGENPTWDDKVVVPLP-PASRLQDAVLYLDIVHANAPEGV 358
           PY  + +       TRV L N + P WD+K  + +  P + L+  V   D+  A      
Sbjct: 79  PYVTVVVPQATLARTRV-LKNSQEPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQ----- 132

Query: 359 KPLVGSARLPLR 394
             ++G+A++P+R
Sbjct: 133 --IIGTAKIPVR 142

>TOP1_HAEIN (P43012) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 868

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 71  PSKTKDKAK-MGSRYEVEVTVGAARDLKNVNWRNGD-LKPYAVLWIDAGARCSTRVD 235
           P+K K   K +GS+Y V+ +VG  RDL  V    G+  KP +   +DA  +   + +
Sbjct: 11  PAKAKTINKYLGSQYVVKSSVGHIRDLPTVGSSTGEKAKPISTKGMDAEEKAKIKAE 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,089,399
Number of Sequences: 219361
Number of extensions: 876129
Number of successful extensions: 3065
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3064
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)