Clone Name | bart24f05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK100345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082H20, full insert sequence Length = 2649 Score = 301 bits (152), Expect = 1e-78 Identities = 253/286 (88%), Gaps = 3/286 (1%) Strand = Plus / Plus Query: 285 cgcggtaccggccggccggagcagctgatgacacagctaaaagaaggacccagaaaagta 344 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | Sbjct: 315 cgcggtaccggccggccggagcagcggatgacacagctaagagaaggacccagaaaagca 374 Query: 345 aaagtttcaaagaggttgaaaagtttgatgtatttgttctagagaaaagctctggctgca 404 |||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||| Sbjct: 375 aaagtttcaaagaggtcgaaaaatttgatgtctttgtcctagagaaaagctctggttgca 434 Query: 405 agttccgttccttgcaacttttgctcttcgctatcatgtctgctgcatttctgacacttc 464 ||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 435 agttccggtccttacaacttctgctcttcgcgatcatgtctgctgcatttctgacactat 494 Query: 465 tatacacaccatctgtgtatgagcatcagttgcagtccaattctcggtttgttaatgtcg 524 | ||||| ||||||||||| || ||||| ||||||| | |||||||||||| | | | Sbjct: 495 tgtacactccatctgtgtacgaccatcaaatgcagtctagttctcggtttgtcagt---g 551 Query: 525 gatggatatgggataagactatccctgatccgagatatgtatcttc 570 | ||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 552 ggtggatatgggacaagaccattcctgatccacgatatgtatcttc 597
>ref|NM_190158.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1860 Score = 258 bits (130), Expect = 2e-65 Identities = 228/260 (87%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 311 gatgacacagctaaaagaaggacccagaaaagtaaaagtttcaaagaggttgaaaagttt 370 |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 4 gatgacacagctaagagaaggacccagaaaagcaaaagtttcaaagaggtcgaaaaattt 63 Query: 371 gatgtatttgttctagagaaaagctctggctgcaagttccgttccttgcaacttttgctc 430 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||| ||||| Sbjct: 64 gatgtctttgtcctagagaaaagctctggttgcaagttccggtccttacaacttctgctc 123 Query: 431 ttcgctatcatgtctgctgcatttctgacacttctatacacaccatctgtgtatgagcat 490 ||||| |||||||||||||||||||||||||| | ||||| ||||||||||| || ||| Sbjct: 124 ttcgcgatcatgtctgctgcatttctgacactattgtacactccatctgtgtacgaccat 183 Query: 491 cagttgcagtccaattctcggtttgttaatgtcggatggatatgggataagactatccct 550 || ||||||| | |||||||||||| | | || ||||||||||| ||||| || ||| Sbjct: 184 caaatgcagtctagttctcggtttgtcagt---gggtggatatgggacaagaccattcct 240 Query: 551 gatccgagatatgtatcttc 570 ||||| ||||||||||||| Sbjct: 241 gatccacgatatgtatcttc 260
>dbj|AK067519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112C08, full insert sequence Length = 3570 Score = 258 bits (130), Expect = 2e-65 Identities = 228/260 (87%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 311 gatgacacagctaaaagaaggacccagaaaagtaaaagtttcaaagaggttgaaaagttt 370 |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 1339 gatgacacagctaagagaaggacccagaaaagcaaaagtttcaaagaggtcgaaaaattt 1398 Query: 371 gatgtatttgttctagagaaaagctctggctgcaagttccgttccttgcaacttttgctc 430 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||| ||||| Sbjct: 1399 gatgtctttgtcctagagaaaagctctggttgcaagttccggtccttacaacttctgctc 1458 Query: 431 ttcgctatcatgtctgctgcatttctgacacttctatacacaccatctgtgtatgagcat 490 ||||| |||||||||||||||||||||||||| | ||||| ||||||||||| || ||| Sbjct: 1459 ttcgcgatcatgtctgctgcatttctgacactattgtacactccatctgtgtacgaccat 1518 Query: 491 cagttgcagtccaattctcggtttgttaatgtcggatggatatgggataagactatccct 550 || ||||||| | |||||||||||| | | || ||||||||||| ||||| || ||| Sbjct: 1519 caaatgcagtctagttctcggtttgtcagt---gggtggatatgggacaagaccattcct 1575 Query: 551 gatccgagatatgtatcttc 570 ||||| ||||||||||||| Sbjct: 1576 gatccacgatatgtatcttc 1595
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 234 bits (118), Expect = 3e-58 Identities = 181/202 (89%) Strand = Plus / Plus Query: 311 gatgacacagctaaaagaaggacccagaaaagtaaaagtttcaaagaggttgaaaagttt 370 |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 38193085 gatgacacagctaagagaaggacccagaaaagcaaaagtttcaaagaggtcgaaaaattt 38193144 Query: 371 gatgtatttgttctagagaaaagctctggctgcaagttccgttccttgcaacttttgctc 430 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||| ||||| Sbjct: 38193145 gatgtctttgtcctagagaaaagctctggttgcaagttccggtccttacaacttctgctc 38193204 Query: 431 ttcgctatcatgtctgctgcatttctgacacttctatacacaccatctgtgtatgagcat 490 ||||| |||||||||||||||||||||||||| | ||||| ||||||||||| || ||| Sbjct: 38193205 ttcgcgatcatgtctgctgcatttctgacactattgtacactccatctgtgtacgaccat 38193264 Query: 491 cagttgcagtccaattctcggt 512 || ||||||| | |||||||| Sbjct: 38193265 caaatgcagtctagttctcggt 38193286 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 285 cgcggtaccggccggccggagcagc 309 ||||||||||||||||||||||||| Sbjct: 38191136 cgcggtaccggccggccggagcagc 38191160 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 527 tggatatgggataagactatccctgatccgagatatgtatcttc 570 ||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 38193469 tggatatgggacaagaccattcctgatccacgatatgtatcttc 38193512
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 234 bits (118), Expect = 3e-58 Identities = 181/202 (89%) Strand = Plus / Plus Query: 311 gatgacacagctaaaagaaggacccagaaaagtaaaagtttcaaagaggttgaaaagttt 370 |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 112319 gatgacacagctaagagaaggacccagaaaagcaaaagtttcaaagaggtcgaaaaattt 112378 Query: 371 gatgtatttgttctagagaaaagctctggctgcaagttccgttccttgcaacttttgctc 430 ||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||| ||||| Sbjct: 112379 gatgtctttgtcctagagaaaagctctggttgcaagttccggtccttacaacttctgctc 112438 Query: 431 ttcgctatcatgtctgctgcatttctgacacttctatacacaccatctgtgtatgagcat 490 ||||| |||||||||||||||||||||||||| | ||||| ||||||||||| || ||| Sbjct: 112439 ttcgcgatcatgtctgctgcatttctgacactattgtacactccatctgtgtacgaccat 112498 Query: 491 cagttgcagtccaattctcggt 512 || ||||||| | |||||||| Sbjct: 112499 caaatgcagtctagttctcggt 112520 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 285 cgcggtaccggccggccggagcagc 309 ||||||||||||||||||||||||| Sbjct: 110370 cgcggtaccggccggccggagcagc 110394 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 527 tggatatgggataagactatccctgatccgagatatgtatcttc 570 ||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 112703 tggatatgggacaagaccattcctgatccacgatatgtatcttc 112746
>dbj|AK071195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087O18, full insert sequence Length = 2078 Score = 69.9 bits (35), Expect = 9e-09 Identities = 100/121 (82%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 450 catttctgacacttctatacacaccatctgtgtatgagcatcagttgcagtccaattctc 509 ||||||||||||| | ||||| ||||||||||| || ||||| ||||||| | ||||| Sbjct: 3 catttctgacactattgtacactccatctgtgtacgaccatcaaatgcagtctagttctc 62 Query: 510 ggtttgttaatgtcggatggatatgggataagactatccctgatccgagatatgtatctt 569 ||||||| | | || ||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 63 ggtttgtcagt---gggtggatatgggacaagaccattcctgatccacgatatgtatctt 119 Query: 570 c 570 | Sbjct: 120 c 120
>ref|XM_475247.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2016 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 269 atgggctccctggaggcgcggtaccggccggccggagc 306 ||||| || |||||| |||||||||||||||||||||| Sbjct: 1 atgggatcgctggagacgcggtaccggccggccggagc 38
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 269 atgggctccctggaggcgcggtaccggccggccggagc 306 ||||| || |||||| |||||||||||||||||||||| Sbjct: 71669 atgggatcgctggagacgcggtaccggccggccggagc 71632
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 269 atgggctccctggaggcgcggtaccggccggccggagc 306 ||||| || |||||| |||||||||||||||||||||| Sbjct: 14250 atgggatcgctggagacgcggtaccggccggccggagc 14213
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 269 atgggctccctggaggcgcggtaccggccggccggagc 306 ||||| || |||||| |||||||||||||||||||||| Sbjct: 20758445 atgggatcgctggagacgcggtaccggccggccggagc 20758408
>dbj|AK064877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J17, full insert sequence Length = 2410 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 269 atgggctccctggaggcgcggtaccggccggccggagc 306 ||||| || |||||| |||||||||||||||||||||| Sbjct: 422 atgggatcgctggagacgcggtaccggccggccggagc 459
>gb|AC073493.27| Homo sapiens Xp BAC RP11-631N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211422 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 350 ttcaaagaggttgaaaagtttgat 373 |||||||||||||||||||||||| Sbjct: 82379 ttcaaagaggttgaaaagtttgat 82356
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 28 cagcgcacagccaccaccaccacc 51 |||||||||||||||||||||||| Sbjct: 13513497 cagcgcacagccaccaccaccacc 13513520 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tgccatcgccattgccgccgc 108 ||||||||||||||||||||| Sbjct: 23439662 tgccatcgccattgccgccgc 23439682
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 28 cagcgcacagccaccaccaccacc 51 |||||||||||||||||||||||| Sbjct: 93180 cagcgcacagccaccaccaccacc 93203
>gb|AY018014.1| Oryza sativa microsatellite MRG0339 containing (AG)X22, closest to marker C1439, genomic sequence Length = 244 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 cggtaccggccggccggagcagc 309 ||||||||||||||||||||||| Sbjct: 244 cggtaccggccggccggagcagc 222
>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204230 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 35 cagccaccaccaccaccgactgcgtc 60 |||||||||||||||||| ||||||| Sbjct: 58277 cagccaccaccaccaccggctgcgtc 58302
>emb|Z77666.1|CEK08E7 Caenorhabditis elegans Cosmid K08E7, complete sequence Length = 38464 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 actgcgtccgtccatccgtctcttct 78 |||||||||||| ||||||||||||| Sbjct: 2670 actgcgtccgtcgatccgtctcttct 2645
>ref|XM_478877.1| Oryza sativa (japonica cultivar-group), mRNA Length = 6102 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 tgccatcgccattgccgccgc 108 ||||||||||||||||||||| Sbjct: 4645 tgccatcgccattgccgccgc 4625
>ref|NM_024473.2| Mus musculus cDNA sequence BC005537 (BC005537), mRNA Length = 2551 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctccgcagc 129 ||||||||||| || |||||||||||||| Sbjct: 78 gccgccgccgccgcctcctcctccgcagc 106
>gb|AC123876.5| Mus musculus BAC clone RP23-270P19 from chromosome 3, complete sequence Length = 203639 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 aggacccagaaaagtaaaagt 349 ||||||||||||||||||||| Sbjct: 90091 aggacccagaaaagtaaaagt 90111
>emb|X52661.1|NGNGOPII N.gonorrhoeae NgoPII restriction and modification genes Length = 3303 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gccatcgccattgccgccgcc 109 ||||||||||||||||||||| Sbjct: 297 gccatcgccattgccgccgcc 317
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 gagaaaagctctggctgcaag 406 ||||||||||||||||||||| Sbjct: 45473 gagaaaagctctggctgcaag 45453
>emb|AL589699.4| Mouse DNA sequence from clone RP23-92G13 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to KIAA0386, five novel genes, the Gmnn gene for geminin, gene PNAS-27, the Ttrap gene for Traf and Tnf receptor associated protein, the gene for a novel protein similar to KIAA0319, the gene for the ortholog of human and rat aldehyde dehydrogenase 5A1 (succinate-semialdehyde dehydrogenase) (ALDH5A1) (SSADH), the 5' end of the Gpld1 gene for glycosylphosphatidylinositol specific phospholipase D1 and four CpG islands, complete sequence Length = 256608 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctccgcagc 129 ||||||||||| || |||||||||||||| Sbjct: 96375 gccgccgccgccgcctcctcctccgcagc 96403
>emb|CR361551.8| Zebrafish DNA sequence from clone CH211-224M9 in linkage group 1, complete sequence Length = 177606 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 catttctgacacttctataca 470 ||||||||||||||||||||| Sbjct: 168690 catttctgacacttctataca 168710
>gb|AF302085.1| Rattus norvegicus calcium-modulating cyclophilin ligand mRNA, complete cds Length = 1362 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gcagcttcctcctccgcagct 130 ||||||||||||||||||||| Sbjct: 175 gcagcttcctcctccgcagct 155
>dbj|AK035718.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530095L16 product:HYPOTHETICAL 27.1 KDA PROTEIN (CDNA FLJ12619 FIS, CLONE NT2RM4001682) homolog [Homo sapiens], full insert sequence Length = 2551 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctccgcagc 129 ||||||||||| || |||||||||||||| Sbjct: 78 gccgccgccgccgcctcctcctccgcagc 106
>ref|NM_053334.1| Rattus norvegicus calcium modulating ligand (Camlg), mRNA Length = 1362 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gcagcttcctcctccgcagct 130 ||||||||||||||||||||| Sbjct: 175 gcagcttcctcctccgcagct 155
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 gagaaaagctctggctgcaag 406 ||||||||||||||||||||| Sbjct: 23724561 gagaaaagctctggctgcaag 23724541
>gb|AC020601.10| Homo sapiens BAC clone RP11-451C14 from 2, complete sequence Length = 204164 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aaaagtaaaagtttcaaagag 358 ||||||||||||||||||||| Sbjct: 158713 aaaagtaaaagtttcaaagag 158693
>gb|BC076377.1| Rattus norvegicus calcium modulating ligand, mRNA (cDNA clone MGC:93311 IMAGE:7110159), complete cds Length = 1387 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gcagcttcctcctccgcagct 130 ||||||||||||||||||||| Sbjct: 174 gcagcttcctcctccgcagct 154
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tgccatcgccattgccgccgc 108 ||||||||||||||||||||| Sbjct: 55 tgccatcgccattgccgccgc 75
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tgccatcgccattgccgccgc 108 ||||||||||||||||||||| Sbjct: 59559 tgccatcgccattgccgccgc 59579
>dbj|AK119427.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-H09, full insert sequence Length = 3357 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 tgccatcgccattgccgccgc 108 ||||||||||||||||||||| Sbjct: 1793 tgccatcgccattgccgccgc 1773
>emb|AJ620190.1| Chlamydomonas reinhardtii mRNA for aldehyde-alcohol dehydrogenase (adhE gene) Length = 3804 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 gccaccaccaccaccgactgc 57 ||||||||||||||||||||| Sbjct: 1135 gccaccaccaccaccgactgc 1115
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gccatcgccattgccgccgcc 109 ||||||||||||||||||||| Sbjct: 1766061 gccatcgccattgccgccgcc 1766081
>gb|AY098525.1| Ananas comosus putative ATP/GTP binding protein mRNA, complete cds Length = 1606 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 101 gccgccgccgcagcttcctcctccgcagc 129 |||||||| || ||||||||||||||||| Sbjct: 244 gccgccgctgctgcttcctcctccgcagc 216
>gb|AC123825.5| Mus musculus BAC clone RP24-93F18 from 8, complete sequence Length = 236875 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 agctcagctcagctcagagga 235 ||||||||||||||||||||| Sbjct: 92505 agctcagctcagctcagagga 92525
>ref|XM_529308.1| PREDICTED: Pan troglodytes LOC450403 (LOC450403), mRNA Length = 1652 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gccgccgcagcttcctcctc 123 |||||||||||||||||||| Sbjct: 805 gccgccgcagcttcctcctc 786
>ref|XM_467794.1| Oryza sativa (japonica cultivar-group), mRNA Length = 583 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 263 gccgccgccgcagcttactcctcc 286
>ref|XM_467793.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2561 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 278 gccgccgccgcagcttactcctcc 301
>ref|XM_467566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 765 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 tgccgccgccgcagcttcctcctccgca 127 |||||||||||| || |||||||||||| Sbjct: 524 tgccgccgccgccgcatcctcctccgca 551
>ref|XM_464074.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2103 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 ttgccgccgccgcagcttcctcctccgc 126 ||||||||||||| ||| |||||||||| Sbjct: 221 ttgccgccgccgcggctccctcctccgc 248
>ref|NM_196678.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0016G17.7), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 atcgccattgccgccgccgc 111 |||||||||||||||||||| Sbjct: 903 atcgccattgccgccgccgc 884
>gb|AC102151.8| Mus musculus chromosome 18, clone RP23-312L17, complete sequence Length = 175398 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tccatccgtctcttcttcct 82 |||||||||||||||||||| Sbjct: 151670 tccatccgtctcttcttcct 151651
>gb|AC165953.3| Mus musculus BAC clone RP24-75N14 from chromosome 17, complete sequence Length = 224622 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tctcttcttcctcatcctgc 90 |||||||||||||||||||| Sbjct: 35531 tctcttcttcctcatcctgc 35550
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cgccattgccgccgccgcagcttcctcc 121 |||||| ||||||||||| ||||||||| Sbjct: 88836 cgccatcgccgccgccgcggcttcctcc 88809
>gb|AC165072.13| Mus musculus chromosome 18, clone RP23-345E17, complete sequence Length = 223019 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tccatccgtctcttcttcct 82 |||||||||||||||||||| Sbjct: 40397 tccatccgtctcttcttcct 40378
>gb|AC120788.7| Mus musculus chromosome 14, clone RP23-279B13, complete sequence Length = 215810 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 18913 gcacagccaccaccaccacc 18932
>ref|XM_957138.1| Neurospora crassa OR74A hypothetical protein (NCU06393.1) partial mRNA Length = 2409 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 1439 gcacagccaccaccaccacc 1458
>ref|XM_326247.1| Neurospora crassa OR74A hypothetical protein (NCU06393.1) partial mRNA Length = 2409 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 1439 gcacagccaccaccaccacc 1458
>gb|AC141647.3| Mus musculus BAC clone RP23-64E12 from chromosome 10, complete sequence Length = 217745 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tctgctgcatttctgacact 462 |||||||||||||||||||| Sbjct: 63582 tctgctgcatttctgacact 63563
>gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosome 10, complete sequence Length = 162143 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tctgctgcatttctgacact 462 |||||||||||||||||||| Sbjct: 156253 tctgctgcatttctgacact 156234
>gb|AC133459.9| Mus musculus chromosome 12, clone RP23-383O15, complete sequence Length = 227171 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 64720 cacagccaccaccaccaccg 64701
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 94 cgccattgccgccgccgcagcttcctcc 121 |||||| ||||||||||| ||||||||| Sbjct: 15248512 cgccatcgccgccgccgcggcttcctcc 15248539 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 5227198 gccgccgccgcagcttactcctcc 5227221
>gb|AC165263.2| Mus musculus BAC clone RP23-21E23 from chromosome 13, complete sequence Length = 180505 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 agctcagctcagctcagagg 234 |||||||||||||||||||| Sbjct: 129368 agctcagctcagctcagagg 129387
>gb|AY062184.1| Oryza sativa (indica cultivar-group) HAP3 transcriptional-activator (LEC1B) mRNA, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 tgccgccgccgcagcttcctcctccgca 127 |||||||||||| || |||||||||||| Sbjct: 589 tgccgccgccgccgcatcctcctccgca 616
>gb|AY062185.1| Oryza sativa (indica cultivar-group) HAP3 transcriptional-activator (LEC1B) gene, complete cds Length = 2309 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 tgccgccgccgcagcttcctcctccgca 127 |||||||||||| || |||||||||||| Sbjct: 1741 tgccgccgccgccgcatcctcctccgca 1768
>ref|XM_845030.1| PREDICTED: Canis familiaris similar to nucleosome assembly protein 1-like 5 (LOC607931), mRNA Length = 537 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccgccgcagcttcctcctcc 124 |||||||||||||||||||| Sbjct: 463 ccgccgcagcttcctcctcc 444
>gb|AC006316.2| Homo sapiens PAC clone RP4-672O11 from 7, complete sequence Length = 143369 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 19212 gcacagccaccaccaccacc 19193
>ref|XM_538883.2| PREDICTED: Canis familiaris similar to Bromodomain and PHD finger-containing protein 3 (LOC481762), mRNA Length = 4171 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 2686 gcacagccaccaccaccacc 2705
>gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, complete sequence Length = 174600 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tctcttcttcctcatcctgc 90 |||||||||||||||||||| Sbjct: 29401 tctcttcttcctcatcctgc 29382
>gb|AC122292.4| Mus musculus BAC clone RP23-256J8 from 10, complete sequence Length = 159736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 tctgctgcatttctgacact 462 |||||||||||||||||||| Sbjct: 118178 tctgctgcatttctgacact 118197
>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence Length = 202155 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 agctcagctcagctcagagg 234 |||||||||||||||||||| Sbjct: 104552 agctcagctcagctcagagg 104533
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 50600 gccgccgccgcagcttactcctcc 50623
>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence Length = 180338 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 177578 gcacagccaccaccaccacc 177597
>gb|AC022296.34| Homo sapiens 3 BAC RP11-91K8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153650 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggagccggagccacacacca 29 |||||||||||||||||||| Sbjct: 150319 ggagccggagccacacacca 150338
>emb|Z98595.1|SPAC11E3 S.pombe chromosome I cosmid c11E3 Length = 38432 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cagagctcagctcagctcag 231 |||||||||||||||||||| Sbjct: 16406 cagagctcagctcagctcag 16425
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cagcgcacagccaccaccaccacc 51 ||||||||||||||| |||||||| Sbjct: 3227340 cagcgcacagccaccgccaccacc 3227363
>emb|AL162755.2|NMA4Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 4/7 Length = 331801 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 catcgccattgccgccgccgcagc 114 |||||||||||||||| ||||||| Sbjct: 301587 catcgccattgccgcctccgcagc 301610
>emb|BX927415.8| Zebrafish DNA sequence from clone CH211-1B13 in linkage group 1, complete sequence Length = 202881 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 atttctgacacttctataca 470 |||||||||||||||||||| Sbjct: 130863 atttctgacacttctataca 130844
>emb|BX927098.24| Zebrafish DNA sequence from clone DKEY-228D14 in linkage group 13, complete sequence Length = 229413 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 atttctgacacttctataca 470 |||||||||||||||||||| Sbjct: 148966 atttctgacacttctataca 148947
>gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence Length = 135294 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 cgccattgccgccgccgcagcttc 117 |||||| ||||||||||||||||| Sbjct: 82084 cgccatagccgccgccgcagcttc 82061
>gb|AC091778.13| Papio anubis clone rp41-280n2, complete sequence Length = 183807 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aagtaaaagtttcaaagaggttga 363 ||||| |||||||||||||||||| Sbjct: 81171 aagtagaagtttcaaagaggttga 81148 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aagtaaaagtttcaaagaggttga 363 ||||| |||||||||||||||||| Sbjct: 75389 aagtagaagtttcaaagaggttga 75366
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 atcgccattgccgccgccgc 111 |||||||||||||||||||| Sbjct: 38500 atcgccattgccgccgccgc 38519
>gb|AE011998.1| Xanthomonas axonopodis pv. citri str. 306, section 376 of 469 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 caccaccaccaccgactgcg 58 |||||||||||||||||||| Sbjct: 3881 caccaccaccaccgactgcg 3900
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 agaggttgaaaagtttgatg 374 |||||||||||||||||||| Sbjct: 91513 agaggttgaaaagtttgatg 91494
>gb|AC109928.4| Homo sapiens BAC clone RP11-755F21 from 4, complete sequence Length = 112353 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 ccagaaaagtaaaagtttcaaaga 357 ||||||||| |||||||||||||| Sbjct: 101124 ccagaaaagcaaaagtttcaaaga 101101
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 29320 gccgccgccgcagcttactcctcc 29297
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 2664704 cacagccaccaccaccaccg 2664685 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 2079283 cacagccaccaccaccaccg 2079264
>gb|AC011008.10| Homo sapiens chromosome 8, clone RP11-177H2, complete sequence Length = 162245 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tctcttcttcctcatcctgc 90 |||||||||||||||||||| Sbjct: 47893 tctcttcttcctcatcctgc 47912
>gb|AC147653.5| Pan troglodytes BAC clone RP43-145M20 from chromosome 7, complete sequence Length = 192464 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 127045 gcacagccaccaccaccacc 127026
>ref|NM_001020362.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC11E3.06), partial mRNA Length = 1197 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cagagctcagctcagctcag 231 |||||||||||||||||||| Sbjct: 337 cagagctcagctcagctcag 356
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 catcgccattgccgccgccgcagc 114 |||||||||||||||| ||||||| Sbjct: 1241393 catcgccattgccgcctccgcagc 1241416
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 atcgccattgccgccgccgc 111 |||||||||||||||||||| Sbjct: 15184801 atcgccattgccgccgccgc 15184820
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cagccaccaccaccaccgac 54 |||||||||||||||||||| Sbjct: 16867980 cagccaccaccaccaccgac 16867999
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 21101396 cacagccaccaccaccaccg 21101415
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 94 cgccattgccgccgccgcagcttcctcc 121 |||||| ||||||||||| ||||||||| Sbjct: 15243046 cgccatcgccgccgccgcggcttcctcc 15243073 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 5226413 gccgccgccgcagcttactcctcc 5226436
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 31456210 gccgccgccgcagcttactcctcc 31456187 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 100 tgccgccgccgcagcttcctcctccgca 127 |||||||||||| || |||||||||||| Sbjct: 30183346 tgccgccgccgccgcatcctcctccgca 30183319 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 atcgccattgccgccgccgc 111 |||||||||||||||||||| Sbjct: 9852971 atcgccattgccgccgccgc 9852952 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 ttgccgccgccgcagcttcctcctccgc 126 ||||||||||||| ||| |||||||||| Sbjct: 2041590 ttgccgccgccgcggctccctcctccgc 2041617
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 atcgccattgccgccgccgc 111 |||||||||||||||||||| Sbjct: 93414 atcgccattgccgccgccgc 93433
>gb|AC154289.1| Mus musculus BAC clone RP23-449E11 from chromosome 16, complete sequence Length = 191617 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 90593 gcacagccaccaccaccacc 90574
>gb|L77973.1|YSPMAP1A Schizosaccharomyces pombe plus-specific mating type auxilary protein (map1) gene, complete cds Length = 2143 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cagagctcagctcagctcag 231 |||||||||||||||||||| Sbjct: 1238 cagagctcagctcagctcag 1257
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gccaccaccaccaccgactg 56 |||||||||||||||||||| Sbjct: 2671847 gccaccaccaccaccgactg 2671866
>gb|AC073606.19| Homo sapiens 12 BAC RP11-390N6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145430 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 gtttcaaagaggttgaaaagtttg 371 |||||||||| ||||||||||||| Sbjct: 104441 gtttcaaagaagttgaaaagtttg 104464
>gb|AC134775.8| Homo sapiens chromosome 11, clone CTD-2609K8, complete sequence Length = 172231 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cagagctcagctcagctcag 231 |||||||||||||||||||| Sbjct: 114175 cagagctcagctcagctcag 114194
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 100 tgccgccgccgcagcttcctcctccgca 127 |||||||||||| || |||||||||||| Sbjct: 56050 tgccgccgccgccgcatcctcctccgca 56023
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 ctgccatcgccattgccgccgccgcagc 114 ||||||||||||||| | |||||||||| Sbjct: 2007943 ctgccatcgccattgtctccgccgcagc 2007970
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0521F09 Length = 164823 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 atcgccattgccgccgccgc 111 |||||||||||||||||||| Sbjct: 33933 atcgccattgccgccgccgc 33914
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 caccaccaccaccgactgcg 58 |||||||||||||||||||| Sbjct: 5279091 caccaccaccaccgactgcg 5279110 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 caccaccaccaccgactgcg 58 |||||||||||||||||||| Sbjct: 769703 caccaccaccaccgactgcg 769684
>dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456F09 Length = 141336 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 57 cacagccaccaccaccaccg 76
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 98397 cacagccaccaccaccaccg 98416
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cagccaccaccaccaccgac 54 |||||||||||||||||||| Sbjct: 65671 cagccaccaccaccaccgac 65690
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 91607 gccgccgccgcagcttactcctcc 91584
>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6 Length = 71736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cagccaccaccaccaccgac 54 |||||||||||||||||||| Sbjct: 5025 cagccaccaccaccaccgac 5044
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 99 ttgccgccgccgcagcttcctcctccgc 126 ||||||||||||| ||| |||||||||| Sbjct: 91798 ttgccgccgccgcggctccctcctccgc 91825
>ref|XM_319863.2| Anopheles gambiae str. PEST ENSANGP00000005246 (ENSANGG00000004043), partial mRNA Length = 1545 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 560 gcacagccaccaccaccacc 541
>dbj|AK111248.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-D09, full insert sequence Length = 583 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 263 gccgccgccgcagcttactcctcc 286
>dbj|AK107861.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B07, full insert sequence Length = 1078 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 tgccgccgccgcagcttcctcctccgca 127 |||||||||||| || |||||||||||| Sbjct: 525 tgccgccgccgccgcatcctcctccgca 552
>dbj|AK101365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035K14, full insert sequence Length = 2560 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||||||||| ||||||| Sbjct: 277 gccgccgccgcagcttactcctcc 300
>dbj|AK063332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A03, full insert sequence Length = 1349 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 566 cacagccaccaccaccaccg 585
>gb|AY104952.1| Zea mays PCO092342 mRNA sequence Length = 1825 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccaccaccaccaccgactgc 57 |||||||||||||||||||| Sbjct: 267 ccaccaccaccaccgactgc 248
>emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chromosome 2, complete sequence Length = 208470 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 aaaagtttcaaagaggttga 363 |||||||||||||||||||| Sbjct: 155850 aaaagtttcaaagaggttga 155831
>emb|CT030243.8| M.truncatula DNA sequence from clone MTH2-72K5 on chromosome 3, complete sequence Length = 111036 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gccgccgccgcagcttcctcctcc 124 |||||||||| ||||||||||||| Sbjct: 19103 gccgccgccggagcttcctcctcc 19126
>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete sequence Length = 231142 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ttcttcctcatcctgccatc 94 |||||||||||||||||||| Sbjct: 29061 ttcttcctcatcctgccatc 29080
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 atcgccattgccgccgccgc 111 |||||||||||||||||||| Sbjct: 15193042 atcgccattgccgccgccgc 15193061
>gb|AC002554.1|AC002554 Human Chromosome 11p11.2 PAC clone pDJ404m15, complete sequence Length = 127590 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cagagctcagctcagctcag 231 |||||||||||||||||||| Sbjct: 51354 cagagctcagctcagctcag 51335
>emb|AL954730.15| Mouse DNA sequence from clone RP23-461C4 on chromosome 11, complete sequence Length = 193721 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tccatccgtctcttcttcctcatc 86 |||||| ||||||||||||||||| Sbjct: 188230 tccatctgtctcttcttcctcatc 188253
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 2504830 cacagccaccaccaccaccg 2504811 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cacagccaccaccaccaccg 52 |||||||||||||||||||| Sbjct: 1450485 cacagccaccaccaccaccg 1450466
>gb|AC138620.4| Mus musculus BAC clone RP23-250E1 from 6, complete sequence Length = 209846 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 agaaaagtaaaagtttcaaa 355 |||||||||||||||||||| Sbjct: 97652 agaaaagtaaaagtttcaaa 97671
>gb|AC168068.3| Mus musculus BAC clone RP23-99G15 from chromosome 8, complete sequence Length = 237728 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 aaaagtaaaagtttcaaaga 357 |||||||||||||||||||| Sbjct: 160231 aaaagtaaaagtttcaaaga 160212
>dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079c, complete sequence Length = 109022 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gcacagccaccaccaccacc 51 |||||||||||||||||||| Sbjct: 106267 gcacagccaccaccaccacc 106248
>gb|J02756.1|MUSBAND32 Mouse band 3 anion exchange protein gene, complete cds Length = 12519 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 tccatccgtctcttcttcctcatc 86 |||||| ||||||||||||||||| Sbjct: 8688 tccatctgtctcttcttcctcatc 8665
>dbj|D78483.1| Schizosaccharomyces pombe DNA for map1, complete cds Length = 2718 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cagagctcagctcagctcag 231 |||||||||||||||||||| Sbjct: 1313 cagagctcagctcagctcag 1332 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,511,897 Number of Sequences: 3902068 Number of extensions: 6511897 Number of successful extensions: 287554 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 284037 Number of HSP's gapped (non-prelim): 3517 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)