Clone Information

BLAST Search Result

Clone Name	bart24f04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote...	38	0.018
2	BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein sh...	35	0.15
3	SLYD_SHIFL (P0A9L2) FKBP-type peptidyl-prolyl cis-trans isomeras...	32	0.99
4	SLYD_ECOLI (P0A9K9) FKBP-type peptidyl-prolyl cis-trans isomeras...	32	0.99
5	SLYD_ECOL6 (P0A9L0) FKBP-type peptidyl-prolyl cis-trans isomeras...	32	0.99
6	SLYD_ECO57 (P0A9L1) FKBP-type peptidyl-prolyl cis-trans isomeras...	32	0.99
7	ONEC2_MOUSE (Q6XBJ3) One cut domain family member 2 (Transcripti...	32	1.3
8	POXM_DROME (P23757) Paired box pox-meso protein (Paired box meso...	32	1.3
9	MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac...	32	1.3
10	OPY1_YEAST (P38271) Protein OPY1 (Overproduction-induced pheromo...	31	2.2
11	PNR_DROME (P52168) GATA-binding factor-A (Transcription factor G...	31	2.2
12	SOX1_HUMAN (O00570) SOX-1 protein	31	2.2
13	DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3) (S...	31	2.2
14	DPOL_HBVAY (P03155) P protein [Includes: DNA-directed DNA polyme...	31	2.9
15	FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription fact...	30	3.8
16	TBX18_MOUSE (Q9EPZ6) T-box transcription factor TBX18 (T-box pro...	30	3.8
17	HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHR...	30	3.8
18	KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precu...	30	3.8
19	ONEC2_HUMAN (O95948) One cut domain family member 2 (Transcripti...	30	4.9
20	PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type...	30	4.9
21	MEOX2_RAT (P39020) Homeobox protein MOX-2 (Growth arrest-specifi...	30	4.9
22	MEOX2_MOUSE (P32443) Homeobox protein MOX-2 (Mesenchyme homeobox 2)	30	4.9
23	URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein ...	30	4.9
24	OTUBL_CAEEL (Q9XVR6) Ubiquitin thioesterase otubain-like protein...	30	4.9
25	MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substra...	30	4.9
26	TYY1_MOUSE (Q00899) Transcriptional repressor protein YY1 (Yin a...	30	4.9
27	HPN_HELPY (P0A0V6) Histidine-rich metal-binding polypeptide	30	4.9
28	HPN_HELPJ (P0A0V7) Histidine-rich, metal binding polypeptide	30	4.9
29	IF2_CAUCR (Q9AC25) Translation initiation factor IF-2	30	6.4
30	Y101_UREPA (Q9PR43) Hypothetical protein UU101	30	6.4
31	SLYD_HAEIN (P44830) FKBP-type peptidyl-prolyl cis-trans isomeras...	30	6.4
32	ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulen...	30	6.4
33	PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula...	30	6.4
34	ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P...	30	6.4
35	ADF1_CANAL (P46589) Adherence factor (Adhesion and aggregation m...	30	6.4
36	ABR_HUMAN (Q12979) Active breakpoint cluster region-related protein	29	8.4
37	SELPA_BRARE (Q98SV1) Selenoprotein Pa precursor (zSelPa)	29	8.4
38	HYPB_RHOCA (P26410) Hydrogenase nickel incorporation protein hypB	29	8.4
39	DHN4_HORVU (P12949) Dehydrin DHN4 (B18)	29	8.4
40	TEN3_TENMO (Q27270) Tenecin-3 precursor	29	8.4
41	S230_PLAFO (P68875) Transmission-blocking target antigen S230 pr...	29	8.4
42	S230_PLAF7 (P68874) Transmission-blocking target antigen S230 pr...	29	8.4
43	PLCB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate pho...	29	8.4
44	HYIN_AGRRH (Q09102) Indoleacetamide hydrolase (EC 3.5.1.-) (IAH)...	29	8.4
45	GA2L3_HUMAN (Q86XJ1) GAS2-like protein 3 (Growth arrest-specific...	29	8.4
46	DSX_DROME (P23023) Protein doublesex	29	8.4
47	SOX1_MOUSE (P53783) SOX-1 protein	29	8.4

>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
           domain-containing protein 1B) (Osa homolog 2) (hOsa2)
           (p250R) (BRG1-binding protein hELD/OSA1)
           (BRG1-associated factor 250b) (BAF250B)
          Length = 2236

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 2/125 (1%)
 Frame = -2

Query: 564 MSQGSRQGGSHAAVEGSHAAGEGIHAEEGTPVAEGIHAA--AGGTRGHQMGTHDHHHEHR 391
           +S  S    + AA   S ++G G   E G      +     A     HQ   H HH  H 
Sbjct: 34  LSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHH 93

Query: 390 QRRA*CWRGAPSPHHCHLLQEQEGTPQVREGKPQVEVGKLQVQAGNLAVEGNLPAAAGTL 211
              A         HH H LQ+Q    Q ++ + Q +  + Q Q   ++   +L  A G  
Sbjct: 94  HHHA------HHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGA 147

Query: 210 PEGIP 196
           P+  P
Sbjct: 148 PQPGP 152

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>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
 Frame = -2

Query: 561 SQGSRQGGSHAAVEGSHAAGEGIHAEEG--TPVAEGIHAAAGGTRGHQMGTHDHHHEHRQ 388
           S  S    +++  + S     G  +  G  T  A G  AAAG         H HHH H Q
Sbjct: 258 SNNSSSSSNNSFTKASSPNNNGARSVGGAATSAATGTTAAAGSHHHQPHHHHHHHHHHHQ 317

Query: 387 RRA*CWRGAPSPHHCHLLQEQEGTPQVREGKPQVEVGKLQVQAGNLAVEGNLPAAAGTLP 208
                       HH H  Q+Q+ T  + +G   + V      AG     G   +++GT  
Sbjct: 318 ------------HHNHQQQQQQQT-SLSQGHASLTVAGGSASAGG-GGGGGSGSSSGTAA 363

Query: 207 EG 202
            G
Sbjct: 364 GG 365

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>SLYD_SHIFL (P0A9L2) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC|
           5.2.1.8) (PPIase) (Rotamase) (Histidine-rich protein)
           (WHP)
          Length = 196

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
 Frame = -2

Query: 528 AVEGSHAAGEGIHAEEGTPVAEGIHAAAGG-------TRGHQMGTHDHHHEH 394
           AVE  H   +G H   G  +   +   A           GH  G HDHHH+H
Sbjct: 111 AVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDH 162

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>SLYD_ECOLI (P0A9K9) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC|
           5.2.1.8) (PPIase) (Rotamase) (Histidine-rich protein)
           (WHP)
          Length = 196

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
 Frame = -2

Query: 528 AVEGSHAAGEGIHAEEGTPVAEGIHAAAGG-------TRGHQMGTHDHHHEH 394
           AVE  H   +G H   G  +   +   A           GH  G HDHHH+H
Sbjct: 111 AVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDH 162

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>SLYD_ECOL6 (P0A9L0) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC|
           5.2.1.8) (PPIase) (Rotamase) (Histidine-rich protein)
           (WHP)
          Length = 196

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
 Frame = -2

Query: 528 AVEGSHAAGEGIHAEEGTPVAEGIHAAAGG-------TRGHQMGTHDHHHEH 394
           AVE  H   +G H   G  +   +   A           GH  G HDHHH+H
Sbjct: 111 AVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDH 162

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>SLYD_ECO57 (P0A9L1) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC|
           5.2.1.8) (PPIase) (Rotamase) (Histidine-rich protein)
           (WHP)
          Length = 196

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
 Frame = -2

Query: 528 AVEGSHAAGEGIHAEEGTPVAEGIHAAAGG-------TRGHQMGTHDHHHEH 394
           AVE  H   +G H   G  +   +   A           GH  G HDHHH+H
Sbjct: 111 AVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDH 162

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>ONEC2_MOUSE (Q6XBJ3) One cut domain family member 2 (Transcription factor|
           ONECUT-2) (OC-2)
          Length = 486

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
 Frame = -2

Query: 429 HQMGTHDHHHEHRQRRA*CWRGAPSPHHCHLLQEQEGTPQVRE-GKPQVEVGKLQVQAGN 253
           H    H HHH H QR +    G+ +     L++++ G P +     P  E+  +      
Sbjct: 154 HHPHHHHHHHHHHQRLSGNVSGSFT-----LMRDERGLPSMNNLYSPYKEMPSMSQSLSP 208

Query: 252 LAVE------GNLPAAAGTLPEGIPPGH 187
           LA        G L  A  +LP   PPGH
Sbjct: 209 LAATPLGNGLGGLHNAQQSLPNYGPPGH 236

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>POXM_DROME (P23757) Paired box pox-meso protein (Paired box mesodermal|
           protein)
          Length = 402

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 23/75 (30%), Positives = 27/75 (36%)
 Frame = -2

Query: 564 MSQGSRQGGSHAAVEGSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQR 385
           M  GS  GG   +  G            GT  +  I+ +  G  G     H HHH H Q 
Sbjct: 181 MGSGSSSGGGSVSSNGGQ--------NNGTSASNNINLSNLGNPGGGPH-HPHHHHHHQS 231

Query: 384 RA*CWRGAPSPHHCH 340
            A     A S HH H
Sbjct: 232 AA----AAASAHHVH 242

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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +1

Query: 364  SSPTSCTALPVLMVVVMGTHLVATGTPRSSMDTLRNRGTLLSMDTLP-SSMATLHSSMAT 540
            SSP + T LPVL      T   AT        TL   GTL    T P ++M+T+H S   
Sbjct: 4242 SSPRTATTLPVLTSTA--TKSTATSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTP 4299

Query: 541  PLPATLAHLVT 573
                T   L T
Sbjct: 4300 ETTHTSTVLTT 4310

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>OPY1_YEAST (P38271) Protein OPY1 (Overproduction-induced pheromone resistant|
           yeast protein 1)
          Length = 328

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
 Frame = -2

Query: 489 AEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRRA*CWRGAPSPHH--CHLLQEQEGT 316
           ++  TP A+      G   G   G H HHH HR      W    + H   C L + Q   
Sbjct: 27  SQNKTPTAQSSSGNNGAADGAPQGYHHHHHHHRH----LWWPRTTDHQYWCVLRKNQFAY 82

Query: 315 PQVREGKPQVEV 280
            + R+ +  + V
Sbjct: 83  YKTRDEREAISV 94

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>PNR_DROME (P52168) GATA-binding factor-A (Transcription factor GATA-A)|
           (dGATA-A) (Protein pannier)
          Length = 540

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 555 GSRQGGSHAAVEGSHAAGEGIHAEEGTPVAE-GIHAAAGGTRGHQM-GTHDHHHEH 394
           GS  GG  A+   SH+A E      GTP      H   GGT GH +     HHH H
Sbjct: 416 GSSSGGGSASAYTSHSA-ETPALSNGTPSPHYQHHHHLGGTHGHHVTAAAAHHHFH 470

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>SOX1_HUMAN (O00570) SOX-1 protein|
          Length = 387

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 10/66 (15%)
 Frame = -2

Query: 561 SQGSRQGGSHAAVEG---------SHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHD 409
           S G   GG++A V G           AA       +   +A G H  AGG   H+   H 
Sbjct: 172 SPGGAAGGAYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHRTPAHP 231

Query: 408 H-HHEH 394
           H HH H
Sbjct: 232 HPHHPH 237

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>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 979

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
 Frame = -2

Query: 474 PVAEGIHAAAG------GTRGHQMGTHDHHHEHRQRRA*CWRGAPSPHHCHLLQEQEGTP 313
           P AEG   + G      G+ G     H HHH H              HH H  Q + G  
Sbjct: 198 PKAEGRGGSGGDSYPGPGSGGPHTSHHHHHHHH--------------HHHH--QSRHG-- 239

Query: 312 QVREGKPQVEVGKLQVQA-GNLAVEGNLPAAAGTLPEGIPPGHRAG 178
           +  + K +   G+ Q ++ G  + + NL + +G L  G PPG   G
Sbjct: 240 KRSKSKDRKGDGRHQAKSTGWWSSDDNLDSDSGFLAGGRPPGEPGG 285

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>DPOL_HBVAY (P03155) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)] (Fragment)
          Length = 750

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -3

Query: 212 CRRVSPLATGRVPMAVVASSHCS*GT*LE-DGKTSDSARSEKEKPSRSGWTTTN*RSPPC 36
           C   SP+ T   P    + +H S G  LE      +SARS+ E+P    W      S PC
Sbjct: 264 CLYQSPVRTAAYPAVSTSENHSSSGHALELHNLPPNSARSQSERPVFPCWWLQFRDSKPC 323

Query: 35  S 33
           S
Sbjct: 324 S 324

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>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)|
          Length = 428

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 30/112 (26%), Positives = 38/112 (33%), Gaps = 11/112 (9%)
 Frame = -2

Query: 522 EGSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRRA*C---------- 373
           +G+   G G H     P     H A      H    H HHH H  +              
Sbjct: 125 KGAPGTGPGGHLHPHHP-----HHAHHHHHHHHHAAHHHHHHHPPQPPPPPPPHMVPYFH 179

Query: 372 WRGAPSPHHCHLLQEQEGTPQVREGKPQV-EVGKLQVQAGNLAVEGNLPAAA 220
            + AP+P   HL  +    PQ +   PQ    GK+Q  A   A      AAA
Sbjct: 180 QQPAPAPQPPHLPSQPAQQPQPQSQPPQTSHPGKMQEAAAVAAAAAAAAAAA 231

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>TBX18_MOUSE (Q9EPZ6) T-box transcription factor TBX18 (T-box protein 18)|
          Length = 613

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +1

Query: 361 GSSPTSCTALPVLMVVVMGTHLVATGTPRSSMDTLRNRGTLLSMDTLPSSMATLH 525
           GSSP+       ++  V G HL+++G  +S  D+ R  G+L    TLPSS  + H
Sbjct: 562 GSSPSGTMTDRQMLPPVEGVHLLSSGGQQSFFDS-RTLGSL----TLPSSQVSAH 611

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>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)|
          Length = 332

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 23/85 (27%), Positives = 25/85 (29%), Gaps = 6/85 (7%)
 Frame = -2

Query: 576 HCDQMSQGSRQGGSHAAVEGSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTH----- 412
           H D          +H A    HAA +  HA          HAA      H    H     
Sbjct: 53  HVDDAHHAHHVADAHHAHHAHHAA-DAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHA 111

Query: 411 -DHHHEHRQRRA*CWRGAPSPHHCH 340
            D HH H    A     A   HH H
Sbjct: 112 ADAHHAHHAADAHHAHHAADAHHAH 136



 Score = 29.3 bits (64), Expect = 8.4
 Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 8/74 (10%)
 Frame = -2

Query: 537 SHAAVEGSHA--AGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTH------DHHHEHRQRR 382
           +H A +  HA  A +  HA          HAA      H    H      D HH H    
Sbjct: 81  AHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAAD 140

Query: 381 A*CWRGAPSPHHCH 340
           A     A   HH H
Sbjct: 141 AHHAHHAADAHHAH 154

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>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)|
          Length = 657

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 429 HQMGTHDHHHEHRQRRA*CWRGAPSPHHCHLLQEQEGTPQVRE 301
           H+   H HHH H Q +A       + HH H  +     PQV +
Sbjct: 61  HEHHHHHHHHHHHQHQAPHQAPHQAHHHHHHGEVNHQAPQVHQ 103

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>ONEC2_HUMAN (O95948) One cut domain family member 2 (Transcription factor|
           ONECUT-2) (OC-2)
          Length = 485

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
 Frame = -2

Query: 414 HDHHHEHRQRRA*CWRGAPSPHHCHLLQEQEGTPQVRE-GKPQVEVGKLQVQAGNLAVE- 241
           H HHH H QR +    G+ +     L++++ G P +     P  E+  +      LA   
Sbjct: 158 HHHHHHHHQRLSGNVSGSFT-----LMRDERGLPAMNNLYSPYKEMPGMSQSLSPLAATP 212

Query: 240 -----GNLPAAAGTLPEGIPPGH 187
                G L  A  +LP   PPGH
Sbjct: 213 LGNGLGGLHNAQQSLPNYGPPGH 235

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>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 495 IHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRRA*CW-RGAPSPHHCHLLQEQEG 319
           +H E GT  A+ + +  G     Q+G+ + H+    RR   W R   S  H H L ++E 
Sbjct: 37  LHVEGGTAAADRLASKHGFINKGQIGSLEDHYLFVHRRT--WKRSLRSSSHRHALLQRE- 93

Query: 318 TPQVREGKPQV 286
            P+VR  + QV
Sbjct: 94  -PEVRWLQQQV 103

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>MEOX2_RAT (P39020) Homeobox protein MOX-2 (Growth arrest-specific homeobox)|
          Length = 303

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 480 GTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRR 382
           G P  EG+ A+    RGH    H HHH H+Q++
Sbjct: 52  GYPNEEGMFASQHH-RGHHHHHHHHHHHHQQQQ 83

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>MEOX2_MOUSE (P32443) Homeobox protein MOX-2 (Mesenchyme homeobox 2)|
          Length = 303

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 480 GTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRR 382
           G P  EG+ A+    RGH    H HHH H+Q++
Sbjct: 52  GYPNEEGMFASQHH-RGHHHHHHHHHHHHQQQQ 83

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>URB1_USTMA (P40349) Siderophore biosynthesis regulatory protein URBS1|
          Length = 950

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 16/59 (27%), Positives = 19/59 (32%)
 Frame = -2

Query: 516 SHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRRA*CWRGAPSPHHCH 340
           S   GE  H     P      +A+ G R   +  H HHH H              HH H
Sbjct: 719 SELHGESSHGTSNAPEHAARASASDGARLGSVVPHHHHHHHHHHANHASHAVHHGHHHH 777

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>OTUBL_CAEEL (Q9XVR6) Ubiquitin thioesterase otubain-like protein (EC 3.4.-.-)|
           (Ubiquitin-specific-processing protease otubain-like)
           (Deubiquitinating enzyme otubain-like)
          Length = 284

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -2

Query: 93  EGEAEPIWMDDDELTISSVLRASVQQGRLD 4
           E E EP+W D D L I+S+++A+  + R++
Sbjct: 203 EQEIEPMWKDADHLAINSLIKAAGTRVRIE 232

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>MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
          Length = 280

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -2

Query: 546 QGGSHAAVEGSH-----AAGEGIHAEEGTPVAEGIHAAAGGTR 433
           +GG+ AA EG       AA E    EEG   AE   AAA G+R
Sbjct: 149 EGGAAAAAEGGKEEAAAAAPEAAGGEEGKAAAEEASAAAAGSR 191

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>TYY1_MOUSE (Q00899) Transcriptional repressor protein YY1 (Yin and yang 1)|
           (YY-1) (Delta transcription factor) (NF-E1) (UCR-motif
           DNA-binding protein)
          Length = 414

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 462 GIHAAAGGTRGHQMGTHDHHHEH 394
           G H   GG  GH    H HHH H
Sbjct: 57  GDHGGGGGGHGHAGHHHHHHHHH 79

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>HPN_HELPY (P0A0V6) Histidine-rich metal-binding polypeptide|
          Length = 59

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = -2

Query: 426 QMGTHDHHHEHRQRRA*CWRGAPSPHHCHLLQEQEGTPQVREGKPQVE 283
           Q G H HHH H       + G    HH H    +EG     +   Q E
Sbjct: 6   QHGGHHHHHHHTHHHH--YHGGEHHHHHHSSHHEEGCCSTSDSHHQEE 51

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>HPN_HELPJ (P0A0V7) Histidine-rich, metal binding polypeptide|
          Length = 59

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = -2

Query: 426 QMGTHDHHHEHRQRRA*CWRGAPSPHHCHLLQEQEGTPQVREGKPQVE 283
           Q G H HHH H       + G    HH H    +EG     +   Q E
Sbjct: 6   QHGGHHHHHHHTHHHH--YHGGEHHHHHHSSHHEEGCCSTSDSHHQEE 51

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>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +2

Query: 167 RPWVPARWPGGIPSGRVPAAAGRLPSTARLPACTWSLPTSTWGLPSR 307
           RP   AR PGG P G  P      P+T  +   T S P    G   R
Sbjct: 302 RPAPGARGPGGPPRGPRPGVPAAAPATPEIQRATRSAPRPGGGAMDR 348

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>Y101_UREPA (Q9PR43) Hypothetical protein UU101|
          Length = 188

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = -2

Query: 543 GGSHAAVEGSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEH 394
           GG+     G H     +  +  T  +E      GGT+    G H+H H H
Sbjct: 133 GGAKDDCCGGHEHEHEVCCDSETKTSETQEECCGGTKDDCCGGHEHEHHH 182

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>SLYD_HAEIN (P44830) FKBP-type peptidyl-prolyl cis-trans isomerase slyD (EC|
           5.2.1.8) (PPIase) (Rotamase)
          Length = 190

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 14/63 (22%)
 Frame = -2

Query: 540 GSHAAVEGSHA-AGEGIH-------AEEGTPV------AEGIHAAAGGTRGHQMGTHDHH 403
           G    V+G+H  AG+ +H       A E T          G H+      GH  G   HH
Sbjct: 114 GDEVVVDGNHMLAGQELHFTVEVVAAREATLEEIAHGHVHGAHSHDDDEEGHGCGCGGHH 173

Query: 402 HEH 394
           HEH
Sbjct: 174 HEH 176

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>ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulence factor|
           ICP34.5)
          Length = 263

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 22/59 (37%), Positives = 27/59 (45%)
 Frame = +2

Query: 155 RRQRRPWVPARWPGGIPSGRVPAAAGRLPSTARLPACTWSLPTSTWGLPSRTWGVPSCS 331
           RR R P  P R PG  P+G VP A  ++ ST        S P +    P  +   PSCS
Sbjct: 5   RRHRGPRRP-RPPG--PTGAVPTAQSQVTSTPNSEPAVRSAPAAAPPPPPASGPPPSCS 60

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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10|
            (MHC class I region proline-rich protein CAT53) (Protein
            FB19)
          Length = 925

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 26/83 (31%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
 Frame = -2

Query: 576  HCDQMSQGSRQGGSHAAVEG---SHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDH 406
            H      G   GG H   EG       G G    EG     G   A GG R H+   H  
Sbjct: 784  HRPHEGPGGGMGGGHRPHEGPGGGMGGGSGHRPHEGPGGGMG---AGGGHRPHEGPGHGG 840

Query: 405  HHEHRQRRA*CWRG----APSPH 349
             H HR       RG     P PH
Sbjct: 841  PHGHRPHDVPGHRGHDHRGPPPH 863

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>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 35/108 (32%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
 Frame = -2

Query: 558 QGSRQGGSHAAVEGSHAAGEGIHAEE-GTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRR 382
           + S  GG   A +GS A G    AEE G     G   AAG   G      D   E   R 
Sbjct: 108 EASGAGGEAGAADGSEAGGGAGGAEEAGEARGAGAGRAAGAAGGRAGRGADAAQEFIDRV 167

Query: 381 A*CWRGAPSPHHCHLLQEQEGTPQVREGKPQVE---VGKLQVQAGNLA 247
           A   RG   P   +  +   G P +R     VE   VG   V A  LA
Sbjct: 168 A---RGPRLPLLPNTPEHGPGAPYLRRVVEWVEGALVGSFAVTARELA 212

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>ADF1_CANAL (P46589) Adherence factor (Adhesion and aggregation mediating|
           surface antigen)
          Length = 612

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
 Frame = -2

Query: 459 IHAAAGGT----RGHQMGTHDHHHEHRQRRA*CWRGAPSPHHCHLLQEQEGTPQVREGKP 292
           + +A GGT      H + ++ HHH H+Q         P  HH H  Q+Q   P       
Sbjct: 536 VSSALGGTSFSQEQHSLHSNQHHHNHQQH--------PLIHH-HQYQQQSSLPPPPTIPS 586

Query: 291 QVEVGKLQVQ 262
            +    L +Q
Sbjct: 587 TIPTSSLSIQ 596

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>ABR_HUMAN (Q12979) Active breakpoint cluster region-related protein|
          Length = 859

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -2

Query: 333 QEQEGTPQVREGKPQVEVGKLQVQAGNLAVEGNLPAAAGTLPEGIPPGHRAG 178
           +EQ+G P+  E  P ++         +   +G     + T PEG+ PG  AG
Sbjct: 35  EEQKGPPEGSETMPYIDESPTMSPQLSARSQGRGDGVSPTPPEGLAPGVEAG 86

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>SELPA_BRARE (Q98SV1) Selenoprotein Pa precursor (zSelPa)|
          Length = 367

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
 Frame = -2

Query: 420 GTHDH-HHEHRQRRA*CWRGAPSPHHCHLLQEQEGTPQVREGKPQVEVGK---LQVQAGN 253
           G H+H HHEH+        G   PHH H             G+ QV+V +    QV  G 
Sbjct: 205 GHHEHGHHEHQGEAERHRHGHHHPHHHH---------HHHRGQQQVDVDQQVLSQVDFGQ 255

Query: 252 LAVE 241
           +AVE
Sbjct: 256 VAVE 259

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>HYPB_RHOCA (P26410) Hydrogenase nickel incorporation protein hypB|
          Length = 335

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 20/61 (32%), Positives = 21/61 (34%)
 Frame = -2

Query: 576 HCDQMSQGSRQGGSHAAVEGSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHE 397
           H D  S       SH     SHAAG G  A+   P A G               HDH H 
Sbjct: 54  HADGTSHAHPHAHSH-----SHAAGHGAEADSDHPHAHG---------------HDHGHS 93

Query: 396 H 394
           H
Sbjct: 94  H 94

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>DHN4_HORVU (P12949) Dehydrin DHN4 (B18)|
          Length = 225

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -2

Query: 546 QGGSHAAVE--GSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEHR 391
           QG  H  V+  G+  AG G+    GT    G  AAAG   GH     D H   R
Sbjct: 4   QGQQHGRVDEYGNPVAGHGVGTGMGTHGGVGTGAAAG---GHYQPMRDEHQTGR 54

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>TEN3_TENMO (Q27270) Tenecin-3 precursor|
          Length = 96

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = -2

Query: 558 QGSRQGGSHAAVEGSHAAGEGIHAEEGTPVAE--GIHAAAGGTRGHQMGTH 412
           QG +QGG     +G H  G     + G P     G     GGT G Q G H
Sbjct: 33  QGGQQGGHLGGQQGGHLGGH----QGGQPGGHLGGHQGGIGGTGGQQHGQH 79

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>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = -2

Query: 540 GSHAAVEGSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRR 382
           G     E     GE +  EEG  V EG+    G   G ++G  +  +   + R
Sbjct: 398 GEEVGEEVGEEVGEEVGEEEGEEVGEGVGEEVGEEEGEEVGEEEGEYVDEKER 450

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>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = -2

Query: 540 GSHAAVEGSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDHHHEHRQRR 382
           G     E     GE +  EEG  V EG+    G   G ++G  +  +   + R
Sbjct: 398 GEEVGEEVGEEVGEEVGEEEGEEVGEGVGEEVGEEEGEEVGEEEGEYVDEKER 450

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>PLCB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154)
          Length = 1216

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = -3

Query: 542 GVAMLLWRVAMLLGRVSMLRRVPLLRRVSMLLRGVPVATRWVPMTTTMSTGNAVHDVGEE 363
           G+      V ++ G+    ++V     V M   G+PV TR    TT  S GNAV+ V EE
Sbjct: 672 GIVANTLSVKIISGQFLSDKKVGTYVEVDMF--GLPVDTRRKAFTTKTSQGNAVNPVWEE 729

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>HYIN_AGRRH (Q09102) Indoleacetamide hydrolase (EC 3.5.1.-) (IAH)|
           (Indole-3-acetamide hydrolase)
          Length = 466

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +2

Query: 164 RRPWVPARWPGGIPSGRVPAAAGRL 238
           R PW P+  PGG   G   A AGRL
Sbjct: 137 RNPWNPSLIPGGSSGGVAAAVAGRL 161

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>GA2L3_HUMAN (Q86XJ1) GAS2-like protein 3 (Growth arrest-specific 2-like 3)|
          Length = 694

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 185 GRVPMAVVASSHCS*GT*LEDGKTSDSARSEKEK--PSRSGWTTTN*RSPPCSVLQSNKA 12
           GR P+++V+    S  T          A+S+     P RSG T  + R PP SV  ++  
Sbjct: 609 GRTPLSIVSLPQSSTKTQTAPKSAQTVAKSQHSTKGPPRSGKTPASIRKPPSSVKDADSG 668

Query: 11  D 9
           D
Sbjct: 669 D 669

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>DSX_DROME (P23023) Protein doublesex|
          Length = 549

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 33/119 (27%), Positives = 38/119 (31%), Gaps = 5/119 (4%)
 Frame = -2

Query: 519 GSHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHDH-HHEHRQRRA*CWRGAPSPHHC 343
           GS  A   IH            AAA     HQ  +H H HH H Q            HH 
Sbjct: 173 GSSTAASSIHGHAHAHHVHMAAAAAASVAQHQHQSHPHSHHHHHQN-----------HHQ 221

Query: 342 HLLQEQEGTPQVREGKPQVE----VGKLQVQAGNLAVEGNLPAAAGTLPEGIPPGHRAG 178
           H   +Q  T       P  +    VG     +G  A   +  AAA T   G   G   G
Sbjct: 222 H-PHQQPATQTALRSPPHSDHGGSVGPATSSSGGGAPSSS-NAAAATSSNGSSGGGGGG 278

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>SOX1_MOUSE (P53783) SOX-1 protein|
          Length = 391

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 10/66 (15%)
 Frame = -2

Query: 561 SQGSRQGGSHAAVEG---------SHAAGEGIHAEEGTPVAEGIHAAAGGTRGHQMGTHD 409
           S G   GG +A V G           AA       +   +A G H  AGG   H    H 
Sbjct: 172 SPGGAAGGGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGRHPHAHPAHP 231

Query: 408 H-HHEH 394
           H HH H
Sbjct: 232 HPHHPH 237


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,293,538
Number of Sequences: 219361
Number of extensions: 1301596
Number of successful extensions: 6596
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 5613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6345
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result