Clone Name | bart24f04 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_493896.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 426 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 255 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 314 ||||||||| | || || ||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 60 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 119 Query: 315 gcgtaccctcc 325 || |||||||| Sbjct: 120 gcataccctcc 130
>gb|AY348312.1| Oryza sativa (indica cultivar-group) GPRP mRNA, complete cds Length = 640 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 255 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 314 ||||||||| | || || ||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 163 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 222 Query: 315 gcgtaccctcc 325 || |||||||| Sbjct: 223 gcataccctcc 233 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 61 aaggggctcttctctaacatgatgcacggcgttgccgg 98
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 255 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 314 ||||||||| | || || ||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 941436 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 941377 Query: 315 gcgtaccctcc 325 || |||||||| Sbjct: 941376 gcataccctcc 941366 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 941538 aaggggctcttctctaacatgatgcacggcgttgccgg 941501 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||||||| ||||||||||||| ||||| Sbjct: 933779 aaggggctcgtctccaacctcatgcacggcgtcgccgg 933742 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 359 ggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||| |||||||| | ||||||||||| ||||| Sbjct: 938673 ggggctcttctccaacctgatgcacggcgtcgccgg 938638
>dbj|AK099495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027I01, full insert sequence Length = 928 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 255 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 314 ||||||||| | || || ||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 249 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 308 Query: 315 gcgtaccctcc 325 || |||||||| Sbjct: 309 gcataccctcc 319 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 147 aaggggctcttctctaacatgatgcacggcgttgccgg 184
>dbj|AK071554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104E19, full insert sequence Length = 926 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 255 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 314 ||||||||| | || || ||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 248 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 307 Query: 315 gcgtaccctcc 325 || |||||||| Sbjct: 308 gcataccctcc 318 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 146 aaggggctcttctctaacatgatgcacggcgttgccgg 183
>dbj|AK068289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147E18, full insert sequence Length = 2163 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 255 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 314 ||||||||| | || || ||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 920 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 979 Query: 315 gcgtaccctcc 325 || |||||||| Sbjct: 980 gcataccctcc 990 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 818 aaggggctcttctctaacatgatgcacggcgttgccgg 855
>dbj|AK060883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B01, full insert sequence Length = 1481 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 255 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 314 ||||||||| | || || ||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 247 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 306 Query: 315 gcgtaccctcc 325 || |||||||| Sbjct: 307 gcataccctcc 317 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 145 aaggggctcttctctaacatgatgcacggcgttgccgg 182
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 255 tacccgcctgcacctggagcttacccacctccacctggggcttaccctcccgcacctggg 314 ||||||||| | || || ||||| || ||||| ||||||||||||||||| |||||||| Sbjct: 31833 tacccgcctcctccgggggcttatccccctcctcctggggcttaccctccaccacctggg 31774 Query: 315 gcgtaccctcc 325 || |||||||| Sbjct: 31773 gcataccctcc 31763 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 31935 aaggggctcttctctaacatgatgcacggcgttgccgg 31898 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||||||| ||||||||||||| ||||| Sbjct: 24176 aaggggctcgtctccaacctcatgcacggcgtcgccgg 24139 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 359 ggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||| |||||||| | ||||||||||| ||||| Sbjct: 29070 ggggctcttctccaacctgatgcacggcgtcgccgg 29035
>emb|AJ242804.1|SST242804 Sporobolus stapfianus mRNA for putative glycine and proline-rich protein Length = 855 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 276 tacccacctccacctggggcttaccctcccgcacctggggcgtaccctcct 326 ||||||||||| || ||||| || |||||| |||||||||| ||||||||| Sbjct: 221 tacccacctcccccaggggcgtatcctcccccacctggggcataccctcct 271 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 285 ccacctggggcttaccctcccgcacctggggcgtaccc 322 ||||||||||| |||||||| |||||||||| ||||| Sbjct: 251 ccacctggggcataccctcctccacctggggcataccc 288 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 265 cacctggagcttacccacctccacctggggcttaccc 301 ||||||| || ||||| |||||||||||||| ||||| Sbjct: 252 cacctggggcataccctcctccacctggggcataccc 288
>gb|AF332722.1| Oryza sativa unknown mRNA Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||||||| ||||||||||||| ||||| Sbjct: 80 aaggggctcgtctccaacctcatgcacggcgtcgccgg 117
>ref|XM_493893.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 534 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 357 aaggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||||| |||||||| ||||||||||||| ||||| Sbjct: 13 aaggggctcgtctccaacctcatgcacggcgtcgccgg 50
>ref|XM_468799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 665 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 456 ggataccctccgcaacaggggtaccctcctcagcatggataccc 499 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 175 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 218 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gggtacccgccgcagcaggg 232 |||||||||||||||||||| Sbjct: 193 gggtacccgccgcagcaggg 212
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 456 ggataccctccgcaacaggggtaccctcctcagcatggataccc 499 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 17898213 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 17898256 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gggtacccgccgcagcaggg 232 |||||||||||||||||||| Sbjct: 17898231 gggtacccgccgcagcaggg 17898250
>gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genomic sequence, complete sequence Length = 142896 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 456 ggataccctccgcaacaggggtaccctcctcagcatggataccc 499 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 124079 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 124036 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gggtacccgccgcagcaggg 232 |||||||||||||||||||| Sbjct: 124061 gggtacccgccgcagcaggg 124042
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 456 ggataccctccgcaacaggggtaccctcctcagcatggataccc 499 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 17891754 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 17891797 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gggtacccgccgcagcaggg 232 |||||||||||||||||||| Sbjct: 17891772 gggtacccgccgcagcaggg 17891791
>dbj|AK058643.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E06, full insert sequence Length = 665 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 456 ggataccctccgcaacaggggtaccctcctcagcatggataccc 499 |||||||||||||| ||||||||||| || ||||| || ||||| Sbjct: 175 ggataccctccgcagcaggggtacccgccgcagcagggctaccc 218 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gggtacccgccgcagcaggg 232 |||||||||||||||||||| Sbjct: 193 gggtacccgccgcagcaggg 212
>ref|NM_102909.2| Arabidopsis thaliana rhodopsin-like receptor AT1G31750 mRNA, complete cds Length = 727 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 273 gcttacccacctccacctggggcttaccctcccgc 307 ||||||||||||||||| || ||||| |||||||| Sbjct: 221 gcttacccacctccacccggtgcttatcctcccgc 255
>gb|AC118686.8| Mus musculus chromosome 6, clone RP23-402P24, complete sequence Length = 223851 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 330 cctggagcaggtggcagtgatgg 352 ||||||||||||||||||||||| Sbjct: 182100 cctggagcaggtggcagtgatgg 182122
>gb|AC074360.5|AC074360 Arabidopsis thaliana chromosome 1 BAC F27M3 genomic sequence, complete sequence Length = 110664 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 273 gcttacccacctccacctggggcttaccctcccgc 307 ||||||||||||||||| || ||||| |||||||| Sbjct: 7641 gcttacccacctccacccggtgcttatcctcccgc 7675
>gb|AC079041.4|AC079041 Arabidopsis thaliana chromosome 1 BAC F5M6 genomic sequence, complete sequence Length = 119420 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 273 gcttacccacctccacctggggcttaccctcccgc 307 ||||||||||||||||| || ||||| |||||||| Sbjct: 117283 gcttacccacctccacccggtgcttatcctcccgc 117317
>gb|AY085309.1| Arabidopsis thaliana clone 144447 mRNA, complete sequence Length = 708 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 273 gcttacccacctccacctggggcttaccctcccgc 307 ||||||||||||||||| || ||||| |||||||| Sbjct: 217 gcttacccacctccacccggtgcttatcctcccgc 251
>dbj|AK057820.1| Homo sapiens cDNA FLJ25091 fis, clone CBL09413 Length = 3342 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgga 23 ||||||||||||||||||||||| Sbjct: 1782 agcatcgagtcggccttgttgga 1804
>gb|AF122022.1|AF122022 Eufolliculina uhligi clone EuT11 unknown mRNA Length = 817 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 471 caggggtaccctcctcagcatggataccctccccagcag 509 ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 415 cagggataccctcctcagcaagcatatcctccccagcag 453 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 459 taccctccgcaacaggggtaccctcctcagcatggataccctccccagca 508 |||||||| ||||| || || |||||||| || || |||||||||||||| Sbjct: 691 taccctcctcaacaaggctatcctcctcaacaaggctaccctccccagca 740
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 atcgtcagttcgtcgtcgtccatccagatc 76 |||||||||||||||||| |||||||||| Sbjct: 2523534 atcgtcagttcgtcgtcgctcatccagatc 2523505
>gb|AY100452.1| Mus musculus lmb145-cap1-243 protein precursor, mRNA, partial cds Length = 354 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 27 agcatcgagtcggccttgttgg 48 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 catcgagtcggccttgttgg 22 |||||||||||||||||||| Sbjct: 1 catcgagtcggccttgttgg 20
>emb|BX039814.1|CNS092VU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 990 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 957 agcatcgagtcggccttgttgg 936
>dbj|AK122627.1| Homo sapiens cDNA FLJ16048 fis, clone FEBRA2008311, weakly similar to GALANIN RECEPTOR TYPE 1 Length = 5671 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 3121 agcatcgagtcggccttgttgg 3142
>dbj|AK094509.1| Homo sapiens cDNA FLJ37190 fis, clone BRALZ2002477 Length = 1803 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttgg 22
>dbj|AK093337.1| Homo sapiens cDNA FLJ36018 fis, clone TESTI2016337, highly similar to BASIGIN PRECURSOR Length = 3712 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 2092 agcatcgagtcggccttgttgg 2113
>dbj|AK024117.1| Homo sapiens cDNA FLJ14055 fis, clone HEMBB1000264, weakly similar to CHL1 PROTEIN Length = 3181 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 1744 agcatcgagtcggccttgttgg 1765
>dbj|AK022855.1| Homo sapiens cDNA FLJ12793 fis, clone NT2RP2002033 Length = 2407 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 2 agcatcgagtcggccttgttgg 23
>dbj|AB046013.1| Macaca fascicularis brain cDNA, clone:QccE-14749, similar to human leucine zipper putative tumor suppressor 2 (LZTS2), mRNA, NM_032429 Length = 2099 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 10 agcatcgagtcggccttgttgg 31
>dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H07, full insert sequence Length = 754 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 704 agcatcgagtcggccttgttgg 725
>dbj|AK105113.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G04, full insert sequence Length = 3525 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 1559 agcatcgagtcggccttgttgg 1580
>dbj|AK105091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-F06, full insert sequence Length = 1431 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 282 agcatcgagtcggccttgttgg 303
>dbj|AK105040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E07, full insert sequence Length = 2278 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 1400 agcatcgagtcggccttgttgg 1421
>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full insert sequence Length = 1275 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 528 agcatcgagtcggccttgttgg 549
>dbj|AK060609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D03, full insert sequence Length = 955 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 559 agcatcgagtcggccttgttgg 580
>dbj|AK060557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D11, full insert sequence Length = 2744 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttgg 22 |||||||||||||||||||||| Sbjct: 1134 agcatcgagtcggccttgttgg 1155
>gb|AY389580.1| Hyacinthus orientalis unknown mRNA Length = 524 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 197 gggataccctccggcagggtacccgccgc 225 ||||||||||||| | ||||||||||||| Sbjct: 187 gggataccctccgcctgggtacccgccgc 159
>emb|CR734439.3|CNS0GTH2 Tetraodon nigroviridis full-length cDNA Length = 711 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttg 21
>emb|BX051613.1|CNS09BZL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC29AB02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 915 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 885 agcatcgagtcggccttgttg 865
>dbj|AK122675.1| Homo sapiens cDNA FLJ16122 fis, clone BLADE2008995 Length = 1979 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttg 21
>dbj|AK093024.1| Homo sapiens cDNA FLJ35705 fis, clone SPLEN2020223 Length = 2119 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttg 21
>dbj|AK024295.1| Homo sapiens cDNA FLJ14233 fis, clone NT2RP4000049 Length = 2656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttg 21
>dbj|AK024257.1| Homo sapiens cDNA FLJ14195 fis, clone NT2RP3001723, weakly similar to Homo sapiens cell recognition molecule Caspr2 (CASPR2) mRNA Length = 3198 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttg 21
>ref|XM_392255.2| PREDICTED: Apis mellifera similar to fasciclin IV (LOC408719), partial mRNA Length = 1741 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ctccttctccgacctcgcggaatcg 111 ||||| ||||||||||||||||||| Sbjct: 1208 ctcctcctccgacctcgcggaatcg 1232
>dbj|AK119416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-G04, full insert sequence Length = 3267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttg 21
>dbj|AK026551.1| Homo sapiens cDNA: FLJ22898 fis, clone KAT05117, highly similar to HSA249677 Homo sapiens mRNA for gamma tubulin ring complex protein (76p gene) Length = 3198 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttg 21
>dbj|AK105055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F10, full insert sequence Length = 640 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgttg 21 ||||||||||||||||||||| Sbjct: 1 agcatcgagtcggccttgttg 21
>gb|AC122562.8| Mus musculus chromosome 5, clone RP24-103L16, complete sequence Length = 172210 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 ggtgctcatggtggtggtcatggg 416 |||| ||||||||||||||||||| Sbjct: 53136 ggtggtcatggtggtggtcatggg 53113
>ref|XM_493895.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 359 ggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||| |||||||| | ||||||||||| ||||| Sbjct: 33 ggggctcttctccaacctgatgcacggcgtcgccgg 68
>ref|XM_478917.1| Oryza sativa (japonica cultivar-group), mRNA Length = 606 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 201 taccctccggcagggtacccgccgcagcaggg 232 ||||| ||||| |||||||| ||||||||||| Sbjct: 179 tacccaccggctgggtaccccccgcagcaggg 210
>ref|XM_614446.2| PREDICTED: Bos taurus similar to Vpr-binding protein (LOC541079), mRNA Length = 5717 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 ccacagcagcatggctaccc 541 |||||||||||||||||||| Sbjct: 2461 ccacagcagcatggctaccc 2442
>ref|XM_421979.1| PREDICTED: Gallus gallus similar to connectin/titin (LOC424126), mRNA Length = 21522 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tcaagagcaatgggaggagg 160 |||||||||||||||||||| Sbjct: 9669 tcaagagcaatgggaggagg 9688
>ref|NM_004407.1| Homo sapiens dentin matrix acidic phosphoprotein (DMP1), mRNA Length = 2682 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 aggtggcagtgatggggaga 357 |||||||||||||||||||| Sbjct: 684 aggtggcagtgatggggaga 703
>gb|BC053208.1| Danio rerio annexin A11a, transcript variant 2, mRNA (cDNA clone MGC:64024 IMAGE:6793195), complete cds Length = 2090 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 254 ttacccgcctgcacctggagcttacccacctccacctggg 293 |||||| |||||| | |||| ||||||||||| ||||||| Sbjct: 116 ttaccctcctgcagcaggaggttacccacctcaacctggg 155
>ref|XM_713379.1| Candida albicans SC5314 hypothetical protein (CaO19_2449), mRNA Length = 1773 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 cggtgctcatggtggtggtcatgg 415 ||||| |||||||||||||||||| Sbjct: 948 cggtggtcatggtggtggtcatgg 971
>ref|XM_713378.1| Candida albicans SC5314 hypothetical protein (CaO19_2448), mRNA Length = 528 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 cggtgctcatggtggtggtcatgg 415 ||||| |||||||||||||||||| Sbjct: 307 cggtggtcatggtggtggtcatgg 284
>gb|BC065062.1| Mus musculus synovial sarcoma translocation, Chromosome 18, mRNA (cDNA clone IMAGE:6416053), partial cds Length = 2854 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 941 cctccacagcaaggatacccaccccagcagca 972
>ref|XM_542870.2| PREDICTED: Canis familiaris similar to GTPase activating Rap/RanGAP domain-like 1 isoform 2 (LOC485747), mRNA Length = 6078 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 accctcctgctcctggagcaggtg 342 ||||||||||||||||||| |||| Sbjct: 5917 accctcctgctcctggagctggtg 5940
>gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, complete sequence Length = 225042 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 176114 cctccacagcaaggatacccaccccagcagca 176145
>gb|AC091523.23| Mus musculus strain C57BL/6J clone rp23-77a8 map 1, complete sequence Length = 235509 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ggcttctccttctccgacct 101 |||||||||||||||||||| Sbjct: 98469 ggcttctccttctccgacct 98450
>emb|BX049572.1|CNS09AEW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC25CD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 613 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgtt 20 |||||||||||||||||||| Sbjct: 2 agcatcgagtcggccttgtt 21
>gb|AY178801.1| Danio rerio annexin 11a mRNA, complete cds Length = 2104 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 254 ttacccgcctgcacctggagcttacccacctccacctggg 293 |||||| |||||| | |||| ||||||||||| ||||||| Sbjct: 146 ttaccctcctgcagcaggaggttacccacctcaacctggg 185
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 ggtgctcatggtggtggtcatggg 416 |||||||||||| ||||||||||| Sbjct: 2447944 ggtgctcatggtcgtggtcatggg 2447921
>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence Length = 116326 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 254 ttacccgcctgcacctggagcttacccacctccacctggg 293 |||||| |||||| | |||| ||||||||||| ||||||| Sbjct: 98977 ttaccctcctgcagcaggaggttacccacctcaacctggg 98938
>gb|BC096742.1| Mus musculus synovial sarcoma translocation, Chromosome 18, mRNA (cDNA clone MGC:102168 IMAGE:6416415), complete cds Length = 2914 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 941 cctccacagcaaggatacccaccccagcagca 972
>dbj|AK093117.1| Homo sapiens cDNA FLJ35798 fis, clone TESTI2005908, highly similar to Homo sapiens hyaluronidase (LUCA-3) mRNA Length = 3817 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agcatcgagtcggccttgtt 20 |||||||||||||||||||| Sbjct: 1954 agcatcgagtcggccttgtt 1973
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tgctcatggtggtggtcatg 414 |||||||||||||||||||| Sbjct: 656075 tgctcatggtggtggtcatg 656094
>dbj|AB211523.1| Lycopersicon esculentum mRNA for hypothetical protein, complete cds, clone:FC10DE01 Length = 800 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 459 taccctccgcaacaggggtaccctcctcagca 490 |||||||| ||||| ||||||||||| ||||| Sbjct: 208 taccctcctcaacaagggtaccctccacagca 239
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 ggtgctcatggtggtggtcatggg 416 |||||||||||| ||||||||||| Sbjct: 1781365 ggtgctcatggtcgtggtcatggg 1781388
>gb|AC093895.3| Homo sapiens BAC clone RP11-716M23 from 4, complete sequence Length = 171135 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 aggtggcagtgatggggaga 357 |||||||||||||||||||| Sbjct: 65053 aggtggcagtgatggggaga 65072
>gb|AC093906.3| Homo sapiens BAC clone RP11-742B18 from 4, complete sequence Length = 189286 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 aggtggcagtgatggggaga 357 |||||||||||||||||||| Sbjct: 176567 aggtggcagtgatggggaga 176586
>dbj|AK149325.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930026C14 product:synovial sarcoma translocation, Chromosome 18, full insert sequence Length = 2859 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 966 cctccacagcaaggatacccaccccagcagca 997
>gb|AY055726.2| Mus musculus synovial sarcoma associated SS18 (Ss18) gene, complete cds, alternatively spliced Length = 64533 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 53218 cctccacagcaaggatacccaccccagcagca 53249
>ref|XM_678528.1| PREDICTED: Danio rerio similar to annexin 11a, transcript variant 1 (LOC560905), mRNA Length = 2314 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 254 ttacccgcctgcacctggagcttacccacctccacctggg 293 |||||| |||||| | |||| ||||||||||| ||||||| Sbjct: 129 ttaccctcctgcagcaggaggttacccacctcaacctggg 168
>ref|XM_702016.1| PREDICTED: Danio rerio similar to annexin 11a, transcript variant 3 (LOC560905), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 254 ttacccgcctgcacctggagcttacccacctccacctggg 293 |||||| |||||| | |||| ||||||||||| ||||||| Sbjct: 129 ttaccctcctgcagcaggaggttacccacctcaacctggg 168
>ref|XM_702015.1| PREDICTED: Danio rerio similar to annexin 11a, transcript variant 2 (LOC560905), mRNA Length = 2296 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 254 ttacccgcctgcacctggagcttacccacctccacctggg 293 |||||| |||||| | |||| ||||||||||| ||||||| Sbjct: 129 ttaccctcctgcagcaggaggttacccacctcaacctggg 168
>dbj|AK166053.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730031E14 product:synovial sarcoma translocation, Chromosome 18, full insert sequence Length = 2943 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 1050 cctccacagcaaggatacccaccccagcagca 1081
>dbj|AK052476.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430032A14 product:synovial sarcoma translocation, Chromosome 18, full insert sequence Length = 2605 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 736 cctccacagcaaggatacccaccccagcagca 767
>dbj|AK051601.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130059H17 product:synovial sarcoma translocation, Chromosome 18, full insert sequence Length = 4154 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 828 cctccacagcaaggatacccaccccagcagca 859
>dbj|AK083887.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130045M12 product:synovial sarcoma translocation, Chromosome 18, full insert sequence Length = 2974 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 1081 cctccacagcaaggatacccaccccagcagca 1112
>dbj|AK083622.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030055F05 product:synovial sarcoma translocation, Chromosome 18, full insert sequence Length = 2859 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 966 cctccacagcaaggatacccaccccagcagca 997
>dbj|AK087147.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030029P18 product:unclassifiable, full insert sequence Length = 2411 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 ggtgctcatggtggtggtcatggg 416 |||| ||||||||||||||||||| Sbjct: 1729 ggtggtcatggtggtggtcatggg 1752
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agatcggctcggcttctcct 91 |||||||||||||||||||| Sbjct: 21056278 agatcggctcggcttctcct 21056259 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tgaagcacggagcacggagg 44 |||||||||||||||||||| Sbjct: 13993500 tgaagcacggagcacggagg 13993481 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 cttctccttctccgacctcg 103 |||||||||||||||||||| Sbjct: 3152341 cttctccttctccgacctcg 3152360
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 201 taccctccggcagggtacccgccgcagcaggg 232 ||||| ||||| |||||||| ||||||||||| Sbjct: 23728900 tacccaccggctgggtaccccccgcagcaggg 23728931
>gb|AC158624.4| Mus musculus BAC RP23-299I16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174188 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ccaacatcatgcacggcgtt 389 |||||||||||||||||||| Sbjct: 113491 ccaacatcatgcacggcgtt 113510
>ref|NM_183410.1| Danio rerio annexin A11a (anxa11a), transcript variant 2, mRNA Length = 2090 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 254 ttacccgcctgcacctggagcttacccacctccacctggg 293 |||||| |||||| | |||| ||||||||||| ||||||| Sbjct: 116 ttaccctcctgcagcaggaggttacccacctcaacctggg 155
>ref|NM_181765.1| Danio rerio annexin A11a (anxa11a), transcript variant 1, mRNA Length = 2104 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 254 ttacccgcctgcacctggagcttacccacctccacctggg 293 |||||| |||||| | |||| ||||||||||| ||||||| Sbjct: 146 ttaccctcctgcagcaggaggttacccacctcaacctggg 185
>ref|XM_341580.2| PREDICTED: Rattus norvegicus synovial sarcoma translocation, Chromosome 18 (predicted) (Ss18_predicted), mRNA Length = 3277 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 1393 cctccacagcaaggatacccaccccagcagca 1424
>dbj|AK183049.1| Mus musculus cDNA, clone:Y0G0124I24, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000041253, based on BLAT search Length = 203 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 162 cctccacagcaaggatacccaccccagcagca 193
>dbj|AK179801.1| Mus musculus cDNA, clone:Y0G0111L24, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000040964, based on BLAT search Length = 293 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 252 cctccacagcaaggatacccaccccagcagca 283
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cggcgttgccggtgctcatg 402 |||||||||||||||||||| Sbjct: 1503882 cggcgttgccggtgctcatg 1503901
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 201 taccctccggcagggtacccgccgcagcaggg 232 ||||| ||||| |||||||| ||||||||||| Sbjct: 73514 tacccaccggctgggtaccccccgcagcaggg 73545
>gb|AF159173.1|AF159173 Gallus gallus structural muscle protein titin mRNA, partial cds Length = 6492 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tcaagagcaatgggaggagg 160 |||||||||||||||||||| Sbjct: 4770 tcaagagcaatgggaggagg 4789
>dbj|AK070285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048B07, full insert sequence Length = 606 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 201 taccctccggcagggtacccgccgcagcaggg 232 ||||| ||||| |||||||| ||||||||||| Sbjct: 179 tacccaccggctgggtaccccccgcagcaggg 210
>dbj|AK067943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122C02, full insert sequence Length = 865 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 359 ggggctcctctccaacatcatgcacggcgttgccgg 394 ||||||| |||||||| | ||||||||||| ||||| Sbjct: 98 ggggctcttctccaacctgatgcacggcgtcgccgg 133
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ggcgttgccggtgctcatgg 403 |||||||||||||||||||| Sbjct: 5284470 ggcgttgccggtgctcatgg 5284451
>dbj|AK065995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048G15, full insert sequence Length = 1308 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 cttctccttctccgacctcg 103 |||||||||||||||||||| Sbjct: 183 cttctccttctccgacctcg 202
>gb|BC083824.1| Rattus norvegicus synovial sarcoma translocation, Chromosome 18, mRNA (cDNA clone IMAGE:7112118), partial cds Length = 2867 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 957 cctccacagcaaggatacccaccccagcagca 988
>gb|U89012.1|HSU89012 Homo sapiens dentin matrix acidic phosphoprotein 1 (DMP1) mRNA, complete cds Length = 2682 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 aggtggcagtgatggggaga 357 |||||||||||||||||||| Sbjct: 684 aggtggcagtgatggggaga 703
>gb|AC153968.3| Mus musculus 10 BAC RP24-343C11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151710 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ccaacatcatgcacggcgtt 389 |||||||||||||||||||| Sbjct: 49191 ccaacatcatgcacggcgtt 49210
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agatcggctcggcttctcct 91 |||||||||||||||||||| Sbjct: 20982487 agatcggctcggcttctcct 20982468 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tgaagcacggagcacggagg 44 |||||||||||||||||||| Sbjct: 13947780 tgaagcacggagcacggagg 13947761 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 cttctccttctccgacctcg 103 |||||||||||||||||||| Sbjct: 3152286 cttctccttctccgacctcg 3152305
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cttctccttctccgacctcg 103 |||||||||||||||||||| Sbjct: 2502 cttctccttctccgacctcg 2483
>emb|AL732536.5|CNS08C9B Oryza sativa chromosome 12, . BAC OJ1111_F12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115351 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tgaagcacggagcacggagg 44 |||||||||||||||||||| Sbjct: 22176 tgaagcacggagcacggagg 22157
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agatcggctcggcttctcct 91 |||||||||||||||||||| Sbjct: 141763 agatcggctcggcttctcct 141744
>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 90756 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cttctccttctccgacctcg 103 |||||||||||||||||||| Sbjct: 65323 cttctccttctccgacctcg 65304
>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144552 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 tgaagcacggagcacggagg 44 |||||||||||||||||||| Sbjct: 130129 tgaagcacggagcacggagg 130110
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 atcggctcggcttctccttc 93 |||||||||||||||||||| Sbjct: 66252 atcggctcggcttctccttc 66271
>gb|AF019629.1|AF019629 Actinomyces naeslundii fimbrial structural subunit (fimA) and putative fimbria-associated protein genes, complete cds Length = 3673 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cgtcgtcgtccatccagatc 76 |||||||||||||||||||| Sbjct: 3353 cgtcgtcgtccatccagatc 3334
>ref|NM_009280.1| Mus musculus synovial sarcoma translocation, Chromosome 18 (Ss18), mRNA Length = 3107 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 1197 cctccacagcaaggatacccaccccagcagca 1228
>gb|U65378.1|HSU65378 Human dentin matrix protein 1 mRNA, complete cds Length = 2640 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 aggtggcagtgatggggaga 357 |||||||||||||||||||| Sbjct: 636 aggtggcagtgatggggaga 655
>gb|AF170026.2| Chlamydomonas reinhardtii core subunit of photosystem II precursor (psbW) gene, complete cds; nuclear gene for chloroplast product Length = 1999 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 ccctgccggctaccctggct 561 |||||||||||||||||||| Sbjct: 859 ccctgccggctaccctggct 878
>emb|AL928797.6| Mouse DNA sequence from clone RP23-178B19 on chromosome 2, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 21581 cctccacagcaaggatacccaccccagcagca 21612
>emb|X93357.1|MMSYTMRNA M.musculus mRNA for SYT Length = 3107 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 cctcctcagcatggataccctccccagcagca 511 ||||| ||||| |||||||| ||||||||||| Sbjct: 1197 cctccacagcaaggatacccaccccagcagca 1228
>dbj|D83390.1| Gallus gallus mRNA for connectin/titin, partial cds Length = 12699 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tcaagagcaatgggaggagg 160 |||||||||||||||||||| Sbjct: 4452 tcaagagcaatgggaggagg 4471
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgctcatggtggtggtcatg 414 |||||||||||||||||||| Sbjct: 964731 tgctcatggtggtggtcatg 964712 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,457,601 Number of Sequences: 3902068 Number of extensions: 4457601 Number of successful extensions: 94681 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93769 Number of HSP's gapped (non-prelim): 898 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)