ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart24e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor 30 3.6
2SRK4_SPOLA (P42690) Tyrosine-protein kinase isoform SRK4 (EC 2.7... 30 6.2
3Y1177_MYCLE (P54134) Hypothetical protein ML1177 29 8.1
4KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13) 29 8.1

>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor|
          Length = 263

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/93 (24%), Positives = 30/93 (32%)
 Frame = +2

Query: 191 TLSPKFKLPCTLVASVSGSLTFLTTVKSC*NHRAIPSDRTEPQVCRST*TSPSARTDPVX 370
           T SPK   PC          T  TT  +C      P  R  P  C    T+    T+   
Sbjct: 30  TTSPK---PCQTTVPTCAPTTTTTTTTTC-----APPTRPPPPPCTDAPTTTKRTTEKST 81

Query: 371 XXXXXXXXXXVQMSPSTASWVWSTERSNSRRST 469
                         P+T +   +T R  + RST
Sbjct: 82  TRRTTTTTRQTTTRPTTTTTTTTTTRRPTTRST 114



to top

>SRK4_SPOLA (P42690) Tyrosine-protein kinase isoform SRK4 (EC 2.7.10.2)|
          Length = 506

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +3

Query: 9   VNKIGAMQQKCLGWGGRGAYLLRRED--PGC*RTTTQDLDRIRH 134
           V ++ A +Q  + +   G++L+R  D  PG    + +D+DR+RH
Sbjct: 127 VKRVDAEKQLMMPFNNLGSFLIRDSDTTPGDFSLSVRDIDRVRH 170



to top

>Y1177_MYCLE (P54134) Hypothetical protein ML1177|
          Length = 126

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 70  RYAPLPPQPRHFCCIAPI 17
           RY   PPQPRH  CIA I
Sbjct: 65  RYEESPPQPRHMNCIAEI 82



to top

>KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13)|
          Length = 1142

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 199 TKIQTSVYSGCVSKRKLDISDDREKLLESPSNPKRPHRTSSVPF 330
           TK  TSV + C+SK   +   D EK+     N + PHR   +PF
Sbjct: 495 TKCYTSVVTKCISKSNAETDPDEEKI-----NHRIPHR--FIPF 531


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.136    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,967,413
Number of Sequences: 219361
Number of extensions: 1169656
Number of successful extensions: 3779
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3778
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
to top