Clone Name | bart24e01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor | 30 | 3.6 | 2 | SRK4_SPOLA (P42690) Tyrosine-protein kinase isoform SRK4 (EC 2.7... | 30 | 6.2 | 3 | Y1177_MYCLE (P54134) Hypothetical protein ML1177 | 29 | 8.1 | 4 | KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13) | 29 | 8.1 |
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>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/93 (24%), Positives = 30/93 (32%) Frame = +2 Query: 191 TLSPKFKLPCTLVASVSGSLTFLTTVKSC*NHRAIPSDRTEPQVCRST*TSPSARTDPVX 370 T SPK PC T TT +C P R P C T+ T+ Sbjct: 30 TTSPK---PCQTTVPTCAPTTTTTTTTTC-----APPTRPPPPPCTDAPTTTKRTTEKST 81 Query: 371 XXXXXXXXXXVQMSPSTASWVWSTERSNSRRST 469 P+T + +T R + RST Sbjct: 82 TRRTTTTTRQTTTRPTTTTTTTTTTRRPTTRST 114
>SRK4_SPOLA (P42690) Tyrosine-protein kinase isoform SRK4 (EC 2.7.10.2)| Length = 506 Score = 29.6 bits (65), Expect = 6.2 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 9 VNKIGAMQQKCLGWGGRGAYLLRRED--PGC*RTTTQDLDRIRH 134 V ++ A +Q + + G++L+R D PG + +D+DR+RH Sbjct: 127 VKRVDAEKQLMMPFNNLGSFLIRDSDTTPGDFSLSVRDIDRVRH 170
>Y1177_MYCLE (P54134) Hypothetical protein ML1177| Length = 126 Score = 29.3 bits (64), Expect = 8.1 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -1 Query: 70 RYAPLPPQPRHFCCIAPI 17 RY PPQPRH CIA I Sbjct: 65 RYEESPPQPRHMNCIAEI 82
>KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13)| Length = 1142 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +1 Query: 199 TKIQTSVYSGCVSKRKLDISDDREKLLESPSNPKRPHRTSSVPF 330 TK TSV + C+SK + D EK+ N + PHR +PF Sbjct: 495 TKCYTSVVTKCISKSNAETDPDEEKI-----NHRIPHR--FIPF 531 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.136 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,967,413 Number of Sequences: 219361 Number of extensions: 1169656 Number of successful extensions: 3779 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3661 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3778 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)