Clone Name | bart24d09 |
---|---|
Clone Library Name | barley_pub |
>gb|AY596522.1| Saccharum officinarum clone SCQGLR1019B07, complete sequence Length = 997 Score = 319 bits (161), Expect = 6e-84 Identities = 306/353 (86%), Gaps = 6/353 (1%) Strand = Plus / Plus Query: 53 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 112 |||||||||||||||||| || || ||||||||||| |||||||| ||||||||||| || Sbjct: 49 gatgacgacggcggcgcgccccacctgggcgccggccaagggcggcaacgagcagggggg 108 Query: 113 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 172 ||| ||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 109 cacccgcatcttcggcccctcccagaagtactcctcccgcgacctcgccgcgcacacctc 168 Query: 173 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 232 |||||||||||||||||| || |||||||| ||||||||| ||||||||||| | | || Sbjct: 169 cctcaagcccagaaaagacggtcaacaaacccaagaggagttacagaagagggacttcag 228 Query: 233 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 292 ||| ||||||||||| || || |||||||||| ||| ||||||||||||||||||| ||| Sbjct: 229 ggaggaacttgaggaacgcgagcgcaagcactactcttccaaggataagtcctatgctga 288 Query: 293 cgagagggaccggcgaaaaagttcaagc---ctgcttttagaaggttcaaaaag---gga 346 || || |||||||| ||||| |||||| || || |||||||||||||| || || Sbjct: 289 agaaagagaccggcggaaaagctcaagccagctactcttagaaggttcaaagagagaggc 348 Query: 347 tgaagataagatagttccacgtgaaattgatgcagacgactctgacgtggagc 399 || ||||||||||||||||| ||||| |||||||| |||||||| ||||||| Sbjct: 349 agaggataagatagttccacgagaaatcgatgcagatgactctgatgtggagc 401 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 453 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 512 ||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 458 ctaatggcagagcttgagaggattaagaaagaaagagctgaggagaagcttagaaaggag 517 Query: 513 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcg 562 || || ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 518 cggcaacaagcagaagaggaggccaagatgaaggaggctgaactgatgcg 567
>gb|AY105042.1| Zea mays PCO098401 mRNA sequence Length = 1154 Score = 287 bits (145), Expect = 2e-74 Identities = 302/353 (85%), Gaps = 6/353 (1%) Strand = Plus / Plus Query: 53 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 112 ||||||||| |||||||| || || ||||||||||| |||||||| ||||||||||| || Sbjct: 150 gatgacgaccgcggcgcgccccacctgggcgccggccaagggcggcaacgagcagggggg 209 Query: 113 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 172 ||| ||||||||||| |||||| ||||| ||||||||||||||||||||| |||||||| Sbjct: 210 cacccgcatcttcggcccctcccagaagttctcctcccgcgacctcgccgcgcacacctc 269 Query: 173 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 232 ||||||||| |||||||| || ||||| || ||||||||| |||||||||||||||| || Sbjct: 270 cctcaagccaagaaaagacggtcaacagacccaagaggagttacagaagaggaatctcag 329 Query: 233 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 292 ||| ||||||||||| ||||| |||||||||| ||| ||||||||||||||||||| || Sbjct: 330 ggaggaacttgaggaacgtgagcgcaagcactactcttccaaggataagtcctatgccga 389 Query: 293 cgagagggaccggcgaaaaagttcaagcc---tgcttttagaaggttcaaaaaggga--- 346 || || |||||||| ||||| || |||| | || |||||||||||||| || || Sbjct: 390 agaaagagaccggcggaaaagctctagccatctactcttagaaggttcaaagagagagac 449 Query: 347 tgaagataagatagttccacgtgaaattgatgcagacgactctgacgtggagc 399 || ||||||||||||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 450 agaggataagatagttccacgagaaatcgatgctgatgactccgatgtggagc 502 Score = 147 bits (74), Expect = 5e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 453 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 512 ||||||||||||||||| |||||||| ||||||||||| ||||| | ||||||||||||| Sbjct: 556 ctaatggcagagcttgagaggattaagaaagaaagagccgaggagaagcttagaaaggag 615 Query: 513 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcg 562 || || ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 616 cggcaacaagcagaagaggaggccaagatgaaggaggctgaactgatgcg 665
>ref|NM_185332.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 281 bits (142), Expect = 1e-72 Identities = 297/348 (85%), Gaps = 3/348 (0%) Strand = Plus / Plus Query: 53 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 112 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 103 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 162 Query: 113 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 172 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 163 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacctcgccgcccacaccac 222 Query: 173 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 232 |||||||||||| ||||| |||||||| || ||||| ||| |||||||||||||||| || Sbjct: 223 cctcaagcccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcag 282 Query: 233 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 292 ||| ||||||||||||||||| | ||||||| ||| || ||||| |||||||||| ||| Sbjct: 283 ggacgaacttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatgctga 342 Query: 293 cgagagggaccggcgaaaaagttcaagcctgcttttagaaggttcaaaaag---ggatga 349 ||||| || |||| ||||| ||||||| || |||||||||||| || || ||| Sbjct: 343 ggagagagataggcggaaaagcacaagcctactcctagaaggttcaaggagagaggctga 402 Query: 350 agataagatagttccacgtgaaattgatgcagacgactctgacgtgga 397 |||||||||||||| | ||||| |||||||| || ||||| ||||| Sbjct: 403 ggataagatagttcctagagaaatcgatgcagatgattctgatgtgga 450 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 453 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 512 |||||||||||||||||||| || || |||||||||||||| || | ||||||||||| Sbjct: 509 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaaccttagaaaggaa 568 Query: 513 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcg 562 || || ||||||||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 569 cgccaacaagcagaagaggaggctaagatgaaggaagctgaactgatgcg 618
>dbj|AK112060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F11, full insert sequence Length = 538 Score = 281 bits (142), Expect = 1e-72 Identities = 297/348 (85%), Gaps = 3/348 (0%) Strand = Plus / Plus Query: 53 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 112 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 93 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 152 Query: 113 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 172 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 153 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacctcgccgcccacaccac 212 Query: 173 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 232 |||||||||||| ||||| |||||||| || ||||| ||| |||||||||||||||| || Sbjct: 213 cctcaagcccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcag 272 Query: 233 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 292 ||| ||||||||||||||||| | ||||||| ||| || ||||| |||||||||| ||| Sbjct: 273 ggacgaacttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatgctga 332 Query: 293 cgagagggaccggcgaaaaagttcaagcctgcttttagaaggttcaaaaag---ggatga 349 ||||| || |||| ||||| ||||||| || |||||||||||| || || ||| Sbjct: 333 ggagagagataggcggaaaagcacaagcctactcctagaaggttcaaggagagaggctga 392 Query: 350 agataagatagttccacgtgaaattgatgcagacgactctgacgtgga 397 |||||||||||||| | ||||| |||||||| || ||||| ||||| Sbjct: 393 ggataagatagttcctagagaaatcgatgcagatgattctgatgtgga 440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 453 ctaatggcagagcttgaaaggattaaaaaagaaagagctg 492 |||||||||||||||||||| || || ||||||||||||| Sbjct: 499 ctaatggcagagcttgaaagaatcaagaaagaaagagctg 538
>dbj|AK111784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E16, full insert sequence Length = 1151 Score = 274 bits (138), Expect = 3e-70 Identities = 296/348 (85%), Gaps = 3/348 (0%) Strand = Plus / Plus Query: 53 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 112 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 102 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 161 Query: 113 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 172 ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| | Sbjct: 162 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacttcgccgcccacaccac 221 Query: 173 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 232 |||||||||||| ||||| |||||||| || ||||| ||| |||||||||||||||| || Sbjct: 222 cctcaagcccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcag 281 Query: 233 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 292 ||| ||||||||||||||||| | ||||||| ||| || ||||| |||||||||| ||| Sbjct: 282 ggacgaacttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatgctga 341 Query: 293 cgagagggaccggcgaaaaagttcaagcctgcttttagaaggttcaaaaag---ggatga 349 ||||| || |||| ||||| ||||||| || |||||||||||| || || ||| Sbjct: 342 ggagagagataggcggaaaagcacaagcctactcctagaaggttcaaggagagaggctga 401 Query: 350 agataagatagttccacgtgaaattgatgcagacgactctgacgtgga 397 |||||||||||||| | ||||| |||||||| || ||||| ||||| Sbjct: 402 ggataagatagttcctagagaaatcgatgcagatgattctgatgtgga 449 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 453 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 512 |||||||||||||||||||| || || |||||||||||||| || | ||||||||||| Sbjct: 508 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaaccttagaaaggaa 567 Query: 513 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcg 562 || || ||||||||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 568 cgccaacaagcagaagaggaggctaagatgaaggaagctgaactgatgcg 617
>gb|BT017404.1| Zea mays clone EL01N0329H05.c mRNA sequence Length = 866 Score = 214 bits (108), Expect = 2e-52 Identities = 227/266 (85%), Gaps = 3/266 (1%) Strand = Plus / Plus Query: 78 tgggcgccggcgaagggcgggaacgagcagggcggcacgcgcatcttcgggccctccggg 137 ||||||||||| |||||||| ||||||||||| ||||| ||||||||| ||| | | Sbjct: 10 tgggcgccggccaagggcggcaacgagcaggggggcacccgcatcttcacccccaaccag 69 Query: 138 aagtactcctcccgcgacctcgccgcccacacctccctcaagcccagaaaagagggacaa 197 |||| |||||||||||||||||||| ||||||||||||||||| |||||||| || ||| Sbjct: 70 aagttctcctcccgcgacctcgccgggcacacctccctcaagccaagaaaagacggtcaa 129 Query: 198 caaactcaagaggaggtacagaagaggaatcttagggatgaacttgaggagcgtgaacgc 257 || || ||||||||| |||||||||||||||| ||||| ||||||||||| ||||| ||| Sbjct: 130 cagacccaagaggagttacagaagaggaatctcagggaggaacttgaggaacgtgagcgc 189 Query: 258 aagcacttctcatccaaggataagtcctatgttgacgagagggaccggcgaaaaagttca 317 ||||||| ||| ||||||||||||||||||| || || || |||||||| ||||| || Sbjct: 190 aagcactactcttccaaggataagtcctatgccgaagaaagagaccggcggaaaagctct 249 Query: 318 agcc---tgcttttagaaggttcaaa 340 |||| | || |||||||||||||| Sbjct: 250 agccatctactcttagaaggttcaaa 275 Score = 147 bits (74), Expect = 5e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 453 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 512 ||||||||||||||||| |||||||| ||||||||||| ||||| | ||||||||||||| Sbjct: 391 ctaatggcagagcttgagaggattaagaaagaaagagccgaggagaagcttagaaaggag 450 Query: 513 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcg 562 || || ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 451 cggcaacaagcagaagaggaggccaagatgaaggaggctgaactgatgcg 500
>gb|BT017465.1| Zea mays clone EL01N0407G03.c mRNA sequence Length = 964 Score = 204 bits (103), Expect = 2e-49 Identities = 239/283 (84%), Gaps = 6/283 (2%) Strand = Plus / Plus Query: 123 ttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctccctcaagccc 182 ||||| |||||| ||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 114 ttcggcccctcccagaagtactcgtcccgcgacctcgccgcgcatacctcgctcaagccc 173 Query: 183 agaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttagggatgaactt 242 |||||||| || ||| | || ||||||||| |||||||||||||||| ||||| |||||| Sbjct: 174 agaaaagacggtcaatagacccaagaggagttacagaagaggaatctcagggaggaactt 233 Query: 243 gaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttgacgagagggac 302 ||||| ||||| |||||||||| ||| ||||||||||||||||||| | | || || ||| Sbjct: 234 gaggaacgtgagcgcaagcactactcttccaaggataagtcctatgctaaagaaagagac 293 Query: 303 cggcgaaaaagttcaagc---ctgcttttagaaggttcaaaaag---ggatgaagataag 356 ||||| ||||| |||||| || || ||||||||||||| || || || |||||| Sbjct: 294 cggcggaaaagctcaagccagctactcctagaaggttcaaagagagaggcagaggataag 353 Query: 357 atagttccacgtgaaattgatgcagacgactctgacgtggagc 399 ||||||||| | |||||||||||||| ||||| || ||||||| Sbjct: 354 atagttccatgagaaattgatgcagatgactccgatgtggagc 396
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 174 bits (88), Expect = 2e-40 Identities = 121/132 (91%) Strand = Plus / Minus Query: 53 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 112 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 414943 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 414884 Query: 113 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 172 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 414883 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacctcgccgcccacaccac 414824 Query: 173 cctcaagcccag 184 |||||||||||| Sbjct: 414823 cctcaagcccag 414812 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 181 ccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttagggatgaac 240 |||| ||||| |||||||| || ||||| ||| |||||||||||||||| ||||| |||| Sbjct: 414227 ccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcagggacgaac 414168 Query: 241 ttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatg 288 ||||||||||||| | ||||||| ||| || ||||| |||||||||| Sbjct: 414167 ttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatg 414120 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 453 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaagg 510 |||||||||||||||||||| || || |||||||||||||| || | |||||||||| Sbjct: 413160 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaaccttagaaagg 413103 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 519 caagcagaagaagaggccaagatgaaggaggctgagctgatgcg 562 ||||||||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 412988 caagcagaagaggaggctaagatgaaggaagctgaactgatgcg 412945
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 174 bits (88), Expect = 2e-40 Identities = 121/132 (91%) Strand = Plus / Minus Query: 53 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 112 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 124896 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 124837 Query: 113 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 172 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 124836 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacctcgccgcccacaccac 124777 Query: 173 cctcaagcccag 184 |||||||||||| Sbjct: 124776 cctcaagcccag 124765 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 181 ccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttagggatgaac 240 |||| ||||| |||||||| || ||||| ||| |||||||||||||||| ||||| |||| Sbjct: 124180 ccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcagggacgaac 124121 Query: 241 ttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatg 288 ||||||||||||| | ||||||| ||| || ||||| |||||||||| Sbjct: 124120 ttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatg 124073 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 453 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaagg 510 |||||||||||||||||||| || || |||||||||||||| || | |||||||||| Sbjct: 123113 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaaccttagaaagg 123056 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 519 caagcagaagaagaggccaagatgaaggaggctgagctgatgcg 562 ||||||||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 122941 caagcagaagaggaggctaagatgaaggaagctgaactgatgcg 122898
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 58 cgacggcggcgcggcctacgtgggcgccggcg 89 |||||||||| ||||||||||| ||||||||| Sbjct: 326701 cgacggcggcacggcctacgtgcgcgccggcg 326732
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 58 cgacggcggcgcggcctacgtgggcgccggcg 89 |||||||||| ||||||||||| ||||||||| Sbjct: 265699 cgacggcggcacggcctacgtgcgcgccggcg 265730
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 58 cgacggcggcgcggcctacgtgggcgccggcg 89 |||||||||| ||||||||||| ||||||||| Sbjct: 188034 cgacggcggcacggcctacgtgcgcgccggcg 188065
>emb|BX004973.10| Mouse DNA sequence from clone RP24-260G16 on chromosome 2, complete sequence Length = 114815 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 agagcttgaaaggattaaaaaa 482 |||||||||||||||||||||| Sbjct: 8482 agagcttgaaaggattaaaaaa 8503
>gb|AC165441.3| Mus musculus BAC clone RP24-548F24 from chromosome 8, complete sequence Length = 235813 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 aaaggattaaaaaagaaagag 489 ||||||||||||||||||||| Sbjct: 29171 aaaggattaaaaaagaaagag 29151
>emb|AL139399.10| Human DNA sequence from clone RP11-574A21 on chromosome Xq21.33-22.3, complete sequence Length = 71169 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 aaactcaagaggaggtacaga 219 ||||||||||||||||||||| Sbjct: 4342 aaactcaagaggaggtacaga 4322
>gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, complete sequence Length = 210849 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 cagagcttgaaaggattaaaa 480 ||||||||||||||||||||| Sbjct: 55469 cagagcttgaaaggattaaaa 55449
>dbj|AB206998.1| Sus scrofa ASIP and AHCY genes for agouti signaling protein and S-adenosylhomocysteine hydrolase, complete cds Length = 127234 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 tacagaagaggaatcttagggatga 238 |||||||||||||||| |||||||| Sbjct: 96013 tacagaagaggaatctgagggatga 96037
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 ttgaaaggattaaaaaagaaa 486 ||||||||||||||||||||| Sbjct: 1142016 ttgaaaggattaaaaaagaaa 1142036
>gb|AC131232.12| Mus musculus chromosome 8, clone RP24-376E20, complete sequence Length = 158672 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 aaaggattaaaaaagaaagag 489 ||||||||||||||||||||| Sbjct: 81539 aaaggattaaaaaagaaagag 81559
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gaggccaagatgaaggaggc 550 |||||||||||||||||||| Sbjct: 80840 gaggccaagatgaaggaggc 80859
>ref|XM_508705.1| PREDICTED: Pan troglodytes similar to hypothetical protein HSPC148 (LOC451493), mRNA Length = 733 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 406 attaaaaaagaaagagctga 425
>ref|XM_526015.1| PREDICTED: Pan troglodytes zinc finger protein, subfamily 1A, 2 (Helios) (LOC470634), mRNA Length = 1683 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1020 gaaggaggctgagctgatgc 1039
>ref|XM_875602.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 26 (LOC541226), mRNA Length = 2019 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1056 gaaggaggctgagctgatgc 1075
>ref|XM_875526.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 25 (LOC541226), mRNA Length = 2113 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1150 gaaggaggctgagctgatgc 1169
>ref|XM_875455.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 24 (LOC541226), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1047 gaaggaggctgagctgatgc 1066
>ref|XM_875379.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 23 (LOC541226), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1032 gaaggaggctgagctgatgc 1051
>ref|XM_875308.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 22 (LOC541226), mRNA Length = 2004 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1041 gaaggaggctgagctgatgc 1060
>ref|XM_875235.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 21 (LOC541226), mRNA Length = 2004 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1041 gaaggaggctgagctgatgc 1060
>ref|XM_875176.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 20 (LOC541226), mRNA Length = 2001 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1038 gaaggaggctgagctgatgc 1057
>ref|XM_875100.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 19 (LOC541226), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1053 gaaggaggctgagctgatgc 1072
>ref|XM_875015.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 18 (LOC541226), mRNA Length = 2046 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1083 gaaggaggctgagctgatgc 1102
>ref|XM_874940.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 17 (LOC541226), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1032 gaaggaggctgagctgatgc 1051
>ref|XM_874859.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 16 (LOC541226), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1008 gaaggaggctgagctgatgc 1027
>ref|XM_874772.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 15 (LOC541226), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1008 gaaggaggctgagctgatgc 1027
>ref|XM_874690.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 14 (LOC541226), mRNA Length = 1975 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1012 gaaggaggctgagctgatgc 1031
>ref|XM_874602.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 13 (LOC541226), mRNA Length = 1969 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1006 gaaggaggctgagctgatgc 1025
>ref|XM_874518.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 12 (LOC541226), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 912 gaaggaggctgagctgatgc 931
>ref|XM_874445.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 11 (LOC541226), mRNA Length = 2007 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1044 gaaggaggctgagctgatgc 1063
>ref|XM_874359.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 10 (LOC541226), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1032 gaaggaggctgagctgatgc 1051
>ref|XM_874279.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 9 (LOC541226), mRNA Length = 1974 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1011 gaaggaggctgagctgatgc 1030
>ref|XM_874195.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 8 (LOC541226), mRNA Length = 1845 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 882 gaaggaggctgagctgatgc 901
>ref|XM_874105.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 7 (LOC541226), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 885 gaaggaggctgagctgatgc 904
>ref|XM_874013.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 6 (LOC541226), mRNA Length = 1980 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1017 gaaggaggctgagctgatgc 1036
>ref|XM_873920.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 5 (LOC541226), mRNA Length = 1998 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1035 gaaggaggctgagctgatgc 1054
>ref|XM_873824.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 4 (LOC541226), mRNA Length = 1728 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 765 gaaggaggctgagctgatgc 784
>ref|XM_873728.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 3 (LOC541226), mRNA Length = 2052 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1089 gaaggaggctgagctgatgc 1108
>ref|XM_615142.2| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 1 (LOC541226), mRNA Length = 2491 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1081 gaaggaggctgagctgatgc 1100
>ref|XM_615292.2| PREDICTED: Bos taurus similar to RIKEN cDNA 0610040D20, transcript variant 1 (LOC535258), mRNA Length = 1631 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 1016 attaaaaaagaaagagctga 1035
>ref|XM_866245.1| PREDICTED: Bos taurus similar to RIKEN cDNA 0610040D20, transcript variant 2 (LOC535258), mRNA Length = 1098 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 483 attaaaaaagaaagagctga 502
>gb|AE013133.1| Thermoanaerobacter tengcongensis MB4, section 160 of 244 of the complete genome Length = 12058 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 ggcagagcttgaaaggattaaaaa 481 ||||||| |||||||||||||||| Sbjct: 3040 ggcagagtttgaaaggattaaaaa 3017
>ref|XM_716407.1| Candida albicans SC5314 cytosolic ribosomal protein S1 (CaO19_3002), mRNA Length = 771 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 gaaaggattaaaaaagaaag 487 |||||||||||||||||||| Sbjct: 39 gaaaggattaaaaaagaaag 58
>gb|AE009047.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 73 of 256 of the complete sequence Length = 11654 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 agcagggcggcacgcgcatc 122 |||||||||||||||||||| Sbjct: 551 agcagggcggcacgcgcatc 532
>gb|AY587073.1| Homo sapiens helios 1+3a isoform (ZNFN1A2) mRNA, complete cds Length = 1760 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1097 gaaggaggctgagctgatgc 1116
>gb|AY587071.1| Homo sapiens helios del(ex5)v isoform (ZNFN1A2) mRNA, complete cds Length = 1365 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 702 gaaggaggctgagctgatgc 721
>gb|AY587070.1| Homo sapiens helios del(ex3,4) isoform (ZNFN1A2) mRNA, complete cds Length = 1146 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 483 gaaggaggctgagctgatgc 502
>gb|AY587069.1| Homo sapiens helios 1v isoform (ZNFN1A2) mRNA, complete cds Length = 1503 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 840 gaaggaggctgagctgatgc 859
>gb|AY587068.1| Homo sapiens helios 1+5a isoform (ZNFN1A2) mRNA, complete cds Length = 1658 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 995 gaaggaggctgagctgatgc 1014
>gb|AY587067.1| Homo sapiens helios del(ex3)+2a isoform (ZNFN1A2) mRNA, complete cds Length = 1398 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 735 gaaggaggctgagctgatgc 754
>gb|AY587066.1| Homo sapiens helios del(ex6)v isoform (ZNFN1A2) mRNA, complete cds Length = 1359 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 696 gaaggaggctgagctgatgc 715
>gb|AY587065.1| Homo sapiens helios 1v+2a isoform (ZNFN1A2) mRNA, complete cds Length = 1587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 924 gaaggaggctgagctgatgc 943
>gb|AY587064.1| Homo sapiens helios 1+5a,5b isoform (ZNFN1A2) mRNA, complete cds Length = 1780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1117 gaaggaggctgagctgatgc 1136
>gb|AY587063.1| Homo sapiens helios 1+2b,2c isoform (ZNFN1A2) mRNA, complete cds Length = 1696 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1033 gaaggaggctgagctgatgc 1052
>gb|AY587062.1| Homo sapiens helios 1+2a,2b isoform (ZNFN1A2) mRNA, complete cds Length = 1737 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1071 gaaggaggctgagctgatgc 1090
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cggcggcgcggcctacgtgg 80 |||||||||||||||||||| Sbjct: 121927 cggcggcgcggcctacgtgg 121946
>gb|AC101737.6| Mus musculus chromosome 1, clone RP23-471L1, complete sequence Length = 235405 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 79363 gaaggaggctgagctgatgc 79344
>ref|XM_533974.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 0610040D20 (LOC476768), mRNA Length = 1450 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 412 attaaaaaagaaagagctga 431
>ref|XM_533756.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 0610040D20 (LOC476550), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 483 attaaaaaagaaagagctga 502
>gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, complete sequence Length = 152406 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 cagaagaagaggccaagatgaagg 546 ||||||||||||||||||| |||| Sbjct: 73307 cagaagaagaggccaagattaagg 73284
>gb|BC028936.1| Homo sapiens zinc finger protein, subfamily 1A, 2 (Helios), mRNA (cDNA clone MGC:34330 IMAGE:4540576), complete cds Length = 2018 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1156 gaaggaggctgagctgatgc 1175
>gb|AC131390.3| Homo sapiens chromosome 16 clone RP11-349E19, complete sequence Length = 199827 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 aaaaaagaaagagctgagga 496 |||||||||||||||||||| Sbjct: 79118 aaaaaagaaagagctgagga 79137
>gb|BC105398.1| Bos taurus similar to RIKEN cDNA 0610040D20, transcript variant 1, mRNA (cDNA clone MGC:128364 IMAGE:7986525), complete cds Length = 1200 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 568 attaaaaaagaaagagctga 587
>emb|AL355353.23| Human DNA sequence from clone RP11-385F7 on chromosome 6 Contains the 5' end of the CD2AP gene for CD2-associated protein and three CpG islands, complete sequence Length = 141605 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 aaaggattaaaaaagaaaga 488 |||||||||||||||||||| Sbjct: 79906 aaaggattaaaaaagaaaga 79925
>emb|CR860131.1| Pongo pygmaeus mRNA; cDNA DKFZp469N0319 (from clone DKFZp469N0319) Length = 3245 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1228 gaaggaggctgagctgatgc 1247
>emb|CR857672.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0617 (from clone DKFZp469C0617) Length = 830 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 494 attaaaaaagaaagagctga 513
>emb|CR599874.1| full-length cDNA clone CS0DI006YO02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 772 attaaaaaagaaagagctga 791
>emb|CR600216.1| full-length cDNA clone CS0CAP005YJ03 of Thymus of Homo sapiens (human) Length = 1078 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 778 attaaaaaagaaagagctga 797
>emb|CR596277.1| full-length cDNA clone CS0DK001YP14 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 772 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 443 attaaaaaagaaagagctga 462
>ref|NM_016260.1| Homo sapiens zinc finger protein, subfamily 1A, 2 (Helios) (ZNFN1A2), mRNA Length = 2490 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1087 gaaggaggctgagctgatgc 1106
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 agctgaggacaggcttagaaagga 511 |||||||| ||||||||||||||| Sbjct: 110224 agctgaggccaggcttagaaagga 110247
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 agcagggcggcacgcgcatc 122 |||||||||||||||||||| Sbjct: 795874 agcagggcggcacgcgcatc 795855
>gb|AY008294.1| Homo sapiens helios 3 mRNA, complete cds Length = 3551 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1551 gaaggaggctgagctgatgc 1570
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cccgcgacctcgccgcccac 167 |||||||||||||||||||| Sbjct: 3621005 cccgcgacctcgccgcccac 3621024
>gb|AF161497.1|AF161497 Homo sapiens HSPC148 mRNA, complete cds Length = 1046 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 469 attaaaaaagaaagagctga 488
>dbj|AK047925.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130021P08 product:zinc finger protein, subfamily 1A, 2 (Helios), full insert sequence Length = 3103 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1062 gaaggaggctgagctgatgc 1081
>gb|AC108066.3| Homo sapiens BAC clone RP11-521H5 from 2, complete sequence Length = 158599 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 116017 gaaggaggctgagctgatgc 115998
>gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosome 14, complete sequence Length = 210115 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 aaggaggctgagctgatgcg 562 |||||||||||||||||||| Sbjct: 30053 aaggaggctgagctgatgcg 30072
>dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 2/28, complete sequence Length = 149298 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcccagaaaagagggacaac 198 |||||||||||||||||||| Sbjct: 4598 gcccagaaaagagggacaac 4579
>ref|NM_001009221.1| Felis catus superfast myosin heavy chain (sMyHC), mRNA Length = 6302 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 aggccaagatgaaggaggctgagc 555 ||||||||||| |||||||||||| Sbjct: 5400 aggccaagatggaggaggctgagc 5423
>ref|XM_228779.3| PREDICTED: Rattus norvegicus similar to cyclin B3 (LOC317389), mRNA Length = 4101 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 ggccaagatgaaggaggctg 552 |||||||||||||||||||| Sbjct: 3861 ggccaagatgaaggaggctg 3842
>ref|XM_237228.3| PREDICTED: Rattus norvegicus zinc finger protein, subfamily 1A, 2 (Helios) (predicted) (Zfpn1a2_predicted), mRNA Length = 2476 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1081 gaaggaggctgagctgatgc 1100
>ref|NM_016403.1| Homo sapiens hypothetical protein HSPC148 (HSPC148), mRNA Length = 1046 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 469 attaaaaaagaaagagctga 488
>dbj|BS000113.1| Pan troglodytes chromosome 22 clone:RP43-098E13, map 22, complete sequences Length = 172432 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcccagaaaagagggacaac 198 |||||||||||||||||||| Sbjct: 79039 gcccagaaaagagggacaac 79020
>gb|U51472.2|FCU51472 Felis catus superfast myosin heavy chain (sMyHC) mRNA, complete cds Length = 6302 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 aggccaagatgaaggaggctgagc 555 ||||||||||| |||||||||||| Sbjct: 5400 aggccaagatggaggaggctgagc 5423
>emb|AJ250393.1|HSA250393 Homo sapiens mRNA for chromosome 11 hypothetical protein (ORF5) Length = 839 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 486 attaaaaaagaaagagctga 505
>gb|AF110775.1|AF110775 Homo sapiens adrenal gland protein AD-002 mRNA, complete cds Length = 804 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 469 attaaaaaagaaagagctga 488
>gb|AF130863.1|AF130863 Homo sapiens zinc finger DNA binding protein Helios mRNA, complete cds Length = 2490 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1087 gaaggaggctgagctgatgc 1106
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcccagaaaagagggacaac 198 |||||||||||||||||||| Sbjct: 251604 gcccagaaaagagggacaac 251585
>dbj|AP002383.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-60C6, complete sequence Length = 170142 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 92995 attaaaaaagaaagagctga 92976
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 tgaaaggattaaaaaagaaa 486 |||||||||||||||||||| Sbjct: 1296122 tgaaaggattaaaaaagaaa 1296103
>ref|NM_011770.2| Mus musculus zinc finger protein, subfamily 1A, 2 (Helios) (Zfpn1a2), mRNA Length = 3103 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1062 gaaggaggctgagctgatgc 1081
>gb|AF044257.1|AF044257 Mus musculus multi-zinc finger protein helios mRNA, complete cds Length = 1847 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gaaggaggctgagctgatgc 561 |||||||||||||||||||| Sbjct: 1095 gaaggaggctgagctgatgc 1114
>gb|BC040946.1| Homo sapiens hypothetical protein HSPC148, mRNA (cDNA clone MGC:48787 IMAGE:6067745), complete cds Length = 870 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 attaaaaaagaaagagctga 493 |||||||||||||||||||| Sbjct: 481 attaaaaaagaaagagctga 500
>emb|CT025159.8| Mouse DNA sequence from clone RP23-336K1 on chromosome 14, complete sequence Length = 198530 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 aaggaggctgagctgatgcg 562 |||||||||||||||||||| Sbjct: 188564 aaggaggctgagctgatgcg 188583
>dbj|AP000252.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:T650, complete sequence Length = 67008 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcccagaaaagagggacaac 198 |||||||||||||||||||| Sbjct: 27441 gcccagaaaagagggacaac 27422
>dbj|AP000212.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 10/12, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcccagaaaagagggacaac 198 |||||||||||||||||||| Sbjct: 64592 gcccagaaaagagggacaac 64573 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,331,782 Number of Sequences: 3902068 Number of extensions: 5331782 Number of successful extensions: 117395 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117000 Number of HSP's gapped (non-prelim): 393 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)