Clone Name | bart24d08 |
---|---|
Clone Library Name | barley_pub |
>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 501 Score = 97.8 bits (242), Expect = 2e-20 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 1/94 (1%) Frame = +2 Query: 269 FCVCRSDQPTAVLQKAIDYACGQG-ADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRS 445 FC+ + +LQ A+D+ACG G DC+A+ Q +CY PD+V AH ++A N+Y+QK Sbjct: 360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGK 419 Query: 446 SGATCDFTGAATLSTTDPSFSGCTFPSSASAAGT 547 + +CDF G AT++TTDPS C FP SA + T Sbjct: 420 ASGSCDFKGVATVTTTDPSRGTCVFPGSAKSNQT 453
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 90.9 bits (224), Expect = 2e-18 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 1/94 (1%) Frame = +2 Query: 269 FCVCRSDQPTAVLQKAIDYACGQG-ADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRS 445 FCV ++D L +++ACGQG A+C AI+ CY P++V +H S+A N Y+QK +S Sbjct: 362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKS 421 Query: 446 SGATCDFTGAATLSTTDPSFSGCTFPSSASAAGT 547 +G TCDF G A +T DPS+ C + S +A T Sbjct: 422 AGGTCDFDGTAITTTRDPSYRTCAYTGSLNANAT 455
>E131_ARATH (O65399) Putative glucan endo-1,3-beta-glucosidase 1 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 402 Score = 86.3 bits (212), Expect = 5e-17 Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Frame = +2 Query: 269 FCVCRSDQPTAVLQKAIDYACGQG-ADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRS 445 +C+ LQ A+D+ACG G ++C+ I+ +CY P+ V H S+A NSY+QK Sbjct: 272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 331 Query: 446 SGATCDFTGAATLSTTDPSFSGCTFPSSASAAGTT 550 + +CDF G A ++TTDPS C FP S T Sbjct: 332 ASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNRT 366
>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 461 Score = 74.7 bits (182), Expect = 2e-13 Identities = 33/86 (38%), Positives = 50/86 (58%) Frame = +2 Query: 269 FCVCRSDQPTAVLQKAIDYACGQGADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRSS 448 +CV + LQ I+YACG DC I+ GAC+SP+ + AH S+ N+Y+Q + Sbjct: 377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHT 435 Query: 449 GATCDFTGAATLSTTDPSFSGCTFPS 526 CDF G ++++DPS+ GC + S Sbjct: 436 DLACDFKGTGIVTSSDPSYGGCKYVS 461
>EA6_ARATH (Q06915) Probable glucan endo-1,3-beta-glucosidase A6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Anther-specific protein A6) Length = 478 Score = 58.5 bits (140), Expect = 1e-08 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Frame = +2 Query: 269 FCVCRSDQPTAVLQKAIDYACGQG-ADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRS 445 +CV L++ + AC Q C A+ CY P + H S+A NSY+ +FR+ Sbjct: 389 WCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRN 448 Query: 446 SGATCDFTGAATLSTTDPSFSGCTFPS 526 C F G A +TT+P C FPS Sbjct: 449 QSIQCFFNGLAHETTTNPGNDRCKFPS 475
>E135_ARATH (Q9M088) Putative glucan endo-1,3-beta-glucosidase 5 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 484 Score = 50.1 bits (118), Expect = 4e-06 Identities = 26/72 (36%), Positives = 40/72 (55%) Frame = +2 Query: 305 LQKAIDYACGQGADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRSSGATCDFTGAATL 484 L ++ YAC ADCT++ +C + + +A + S+A NSY+Q + C F G + + Sbjct: 379 LGPSVSYACDH-ADCTSLGYGSSCGNLN-LAQNVSYAFNSYYQVSNQLDSACKFPGLSIV 436 Query: 485 STTDPSFSGCTF 520 ST DPS C F Sbjct: 437 STRDPSVGSCKF 448
>E136_ARATH (Q93Z08) Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 477 Score = 46.6 bits (109), Expect = 5e-05 Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 4/125 (3%) Frame = +2 Query: 161 FALRLGT*RRGSLMEXXXXXXXXXXXXXXXXXXXXDFCVC----RSDQPTAVLQKAIDYA 328 +AL LGT G+L++ +CV R D P A+ YA Sbjct: 337 YALNLGTTNTGALIQAKGVRYLERK-----------WCVMKPNVRLDDPQVA--PAVSYA 383 Query: 329 CGQGADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRSSGATCDFTGAATLSTTDPSFS 508 C G DCT++ +C + D + S+A NSY+Q C F + ++ TDPS Sbjct: 384 CSLG-DCTSLGVGTSCANLDG-KQNISYAFNSYYQIQDQLDTACKFPNISEVTKTDPSTG 441 Query: 509 GCTFP 523 C FP Sbjct: 442 TCRFP 446
>EPD1_CANMA (P56092) Protein EPD1 precursor (Essential for pseudohyphal| development 1) Length = 549 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%) Frame = +2 Query: 272 CVCRSDQPTAVLQKAIDYACGQGADCTAIEQSGA-----CYSPDEVAAHCSWAANSYFQK 436 CV + T DY C + DC+ I + YSP S+ N Y+++ Sbjct: 378 CVVADNVSTDDYSDLFDYVCAK-IDCSGINANATTGDYGAYSPCGAKDKLSFVLNLYYEE 436 Query: 437 FRSSGATCDFTGAATLSTTDPSFSGCTFPSSASAAG 544 S + CDF+G+A+L + + S + SSA +G Sbjct: 437 QNESKSACDFSGSASLQSASTASSCAAYLSSAGVSG 472
>PHR2_CANAL (O13318) pH-responsive protein 2 precursor (pH-regulated protein 2)| Length = 546 Score = 43.5 bits (101), Expect = 4e-04 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 14/107 (13%) Frame = +2 Query: 266 DFCVCRSDQPTAVLQKAID---------YACGQGADCTAIEQSGA-----CYSPDEVAAH 403 + C C S V+ +D Y C + DC I +G YSP Sbjct: 369 EVCECMSASLKCVVDDKVDSDDYSDLFSYICAK-IDCDGINANGTTGEYGAYSPCHSKDK 427 Query: 404 CSWAANSYFQKFRSSGATCDFTGAATLSTTDPSFSGCTFPSSASAAG 544 S+ N Y+++ + S + CDF G+A+L + + S + SSA ++G Sbjct: 428 LSFVMNLYYEQNKESKSACDFGGSASLQSAKTASSCSAYLSSAGSSG 474
>GAS1_YEAST (P22146) Glycolipid-anchored surface protein 1 precursor| (Glycoprotein GP115) Length = 559 Score = 37.0 bits (84), Expect = 0.037 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 5/97 (5%) Frame = +2 Query: 272 CVCRSDQPTAVLQKAIDYACGQGADCTAIEQSGAC-----YSPDEVAAHCSWAANSYFQK 436 CV D + + ++ C + DC+ I +G YS S+ N Y++K Sbjct: 379 CVVSDDVDSDDYETLFNWICNE-VDCSGISANGTAGKYGAYSFCTPKEQLSFVMNLYYEK 437 Query: 437 FRSSGATCDFTGAATLSTTDPSFSGCTFPSSASAAGT 547 S + C F+G+ATL T S + + GT Sbjct: 438 SGGSKSDCSFSGSATLQTATTQASCSSALKEIGSMGT 474
>IE63_HHV1E (P36295) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 511 Score = 33.1 bits (74), Expect = 0.54 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -3 Query: 201 MSEPLRYVPRRRANSQDRPRC-WKEGREAPESSAGRSKDSP 82 +S+P R PR N DRP W +G AP A R + P Sbjct: 159 LSDPRRRAPRTNRNPGDRPGAGWTDGPGAPHGEAWRGSEQP 199
>YLM2_SCHPO (Q9P378) Hypothetical protein C19B12.02c precursor| Length = 542 Score = 31.6 bits (70), Expect = 1.6 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 6/99 (6%) Frame = +2 Query: 272 CVCRSDQPTAVLQKAIDYACGQGADCTAIEQSGA------CYSPDEVAAHCSWAANSYFQ 433 CV D + Y C + C I +G YS + + ++Y+ Sbjct: 376 CVINDDVSSDDYSDLFSYVCNE-ISCDGITANGTYPGQYGSYSYCDAKQQLDYVLDAYY- 433 Query: 434 KFRSSGATCDFTGAATLSTTDPSFSGCTFPSSASAAGTT 550 S+ CDF+G+ATL + + C S SAAG++ Sbjct: 434 ---SAKGDCDFSGSATLVSASSATGTCA--SYLSAAGSS 467
>PHR1_CANAL (P43076) pH-responsive protein 1 precursor (pH-regulated protein 1)| Length = 548 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 15/97 (15%) Frame = +2 Query: 269 FCVCRSDQPTAVLQKAID---------YACGQGADCTAIEQSGACYSPDEVAAHCS---- 409 +C C S V+ +D CG DC+AI G+ VA+ CS Sbjct: 380 YCDCISKSLECVVADDVDKEDYGDLFGQVCGY-IDCSAISADGS-KGEYGVASFCSDKDR 437 Query: 410 --WAANSYFQKFRSSGATCDFTGAATLSTTDPSFSGC 514 + N Y+ + CDF G+A++++ + C Sbjct: 438 LSYVLNQYYLDQDKKSSACDFKGSASINSKASASGSC 474
>MOBA_RHOCA (Q9X7K0) Molybdopterin-guanine dinucleotide biosynthesis protein A| Length = 190 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/72 (23%), Positives = 32/72 (44%) Frame = +2 Query: 293 PTAVLQKAIDYACGQGADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRSSGATCDFTG 472 P A ++ +D+A G GA+ + + P+++ + AA ++ Q F T Sbjct: 73 PMAGIRAGLDWAAGIGAEALVSTATDTPFLPEDLVERLAAAAPAHAQSFGRDHYTAALWR 132 Query: 473 AATLSTTDPSFS 508 AT+ D F+ Sbjct: 133 VATVPRIDALFA 144
>YPV8_METTF (P29584) Hypothetical 40.7 kDa protein (ORF8)| Length = 361 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = -2 Query: 418 GGPGAVRGDLVGAVARPALLDGRAVGALPARVVDRLLQ 305 GGPG R DLVG+ R +L+ R G L VD +L+ Sbjct: 245 GGPGNGRCDLVGSAVRNDILNYRVTGVL-LEFVDHILR 281
>POLG_HCVEV (O39928) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3013 Score = 29.6 bits (65), Expect = 5.9 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 296 TAVLQKAIDYACGQGADCTAIEQSGAC 376 TA+L++A+DY G A C+A+ AC Sbjct: 254 TALLRRAVDYLAGGAAFCSALYVGDAC 280
>SP70_DICDI (P15269) Spore coat protein SP70 precursor (Beejin protein)| Length = 537 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Frame = +2 Query: 329 CGQGADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRSSGATCDFTGAATL---STTDP 499 C G CT + Q C SP ++ S S+ S+ + TG +T +TT Sbjct: 163 CPNGYICTIVNQLAVCVSPSSSSSSSSSTTGSHTTTGGSTTGSHTTTGGSTTGSHTTTGG 222 Query: 500 SFSGCTFPSSASAAGT 547 S +G + S G+ Sbjct: 223 STTGSHTTTGGSTTGS 238
>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1| light chain LC1] Length = 2468 Score = 29.6 bits (65), Expect = 5.9 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +2 Query: 314 AIDYACGQGADCTAIEQSGACYSPDEVAAHCSWAANSYFQKFRSSGATCDF 466 A D A G+GA+ E+SG SPD+V+ + S +Q + G + DF Sbjct: 1416 ADDKASGRGAESPFEEKSGKQGSPDQVSPVSEMTSTSLYQD-KQEGKSTDF 1465
>YPZ8_METTF (P29585) Hypothetical 40.6 kDa protein (ORF8')| Length = 361 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -2 Query: 418 GGPGAVRGDLVGAVARPALLDGRAVGALPARVVDRLLQ 305 GGPG R DLVG R +L+ R G L VD +L+ Sbjct: 245 GGPGNGRCDLVGGAVRNDVLNHRVTGVL-LEFVDHILR 281 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,796,018 Number of Sequences: 219361 Number of extensions: 1009023 Number of successful extensions: 3459 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3377 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3455 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)