Clone Name | bart24d05 |
---|---|
Clone Library Name | barley_pub |
>gb|AY103777.1| Zea mays PCO113531 mRNA sequence Length = 2209 Score = 373 bits (188), Expect = e-100 Identities = 400/471 (84%) Strand = Plus / Plus Query: 123 gccgtcctcggctgcgccgactcgtcgcaggctaagagggctcgcgtcctctcgtgctcc 182 ||||| ||||| ||| |||||| ||| ||||| |||||||||||| ||||| | |||||| Sbjct: 107 gccgtgctcggttgctccgactggtctcaggcaaagagggctcgcatcctcgcctgctcc 166 Query: 183 cgcaggctgaagcacaggggaccggactggtccgggctgttccagtgcgagggcaacttc 242 | ||| ||||||||||||| || |||||||| || || | |||| ||||||||||||| Sbjct: 167 agaaggttgaagcacaggggccccgactggtcgggcctttaccagcacgagggcaacttc 226 Query: 243 ctggcgcagcagcggctcgccgtcgtctccccgctctccggtgaccagcccctctacaac 302 ||||||||||||||||||||||||||||||||||| ||||| |||||||| || | |||| Sbjct: 227 ctggcgcagcagcggctcgccgtcgtctccccgctgtccggcgaccagccgctgttcaac 286 Query: 303 gaggaccgtaccgtcgtcgtcgtggccaatggagaaatctacaaccacaagaagatccgg 362 |||||||| |||||||| || |||||||||||||| ||||||||||||||||| ||||| Sbjct: 287 gaggaccgcaccgtcgtggtggtggccaatggagagatctacaaccacaagaacgtccgg 346 Query: 363 aagcagttcgccgccaagcacaccttcaccaccggcagcgactgcgaggtcataatccct 422 ||||||||| ||| || |||| ||||| ||| ||||| |||||||||||||| || || Sbjct: 347 aagcagttcaccggcacacacaacttcagcacgggcagtgactgcgaggtcatcatgccc 406 Query: 423 ctgtatgaggagtacggcgagaacttcgtcaacatgctggacggcgtcttctccttcgta 482 ||||| ||| ||||||||||||||||||| ||||||||||||| || ||| | ||||| Sbjct: 407 ctgtacgagaagtacggcgagaacttcgtggacatgctggacggggtgttcgcgttcgtg 466 Query: 483 ctgtacgacacccgcaacaagacgtacatggcagcacgcgacgccgtcggcngtcacccc 542 || |||||||||||| ||| ||| ||| |||| || ||||||||| ||||| |||| Sbjct: 467 ctctacgacacccgcgacaggacctacgtggcggcgcgcgacgccatcggcgtcaacccg 526 Query: 543 ctctacttcggccggggcaccgacggctccgtctggattgcgtctgagatg 593 |||||| ||||| |||||| ||||| ||||||||||| ||||| |||||| Sbjct: 527 ctctacatcggctggggcagtgacggttccgtctggatcgcgtccgagatg 577
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Minus Query: 186 aggctgaagcacaggggaccggactggtccgggctgttccagtgcgagggcaacttcctg 245 |||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||| Sbjct: 10095687 aggctgaagcacaggggacccgactggtccgggttgtaccagtgcgagggaaacttcctc 10095628 Query: 246 gcgcagcagcggctcgccgtcgtctccccgctctccggtgaccagcccctctacaacgag 305 || |||||||| |||||| ||||||||||||||||||| |||||||| || ||||||| | Sbjct: 10095627 gctcagcagcgtctcgccatcgtctccccgctctccggcgaccagccgctgtacaacgcg 10095568 Query: 306 gaccgtaccgtcgtcgtcgtgg 327 ||||| ||| |||||||||||| Sbjct: 10095567 gaccggaccatcgtcgtcgtgg 10095546 Score = 153 bits (77), Expect = 8e-34 Identities = 127/144 (88%) Strand = Plus / Minus Query: 425 gtatgaggagtacggcgagaacttcgtcaacatgctggacggcgtcttctccttcgtact 484 ||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||| || Sbjct: 10095211 gtatgaggagtacggcgaggacttcgtcgacatgctggacggcgtgttcgccttcgtcct 10095152 Query: 485 gtacgacacccgcaacaagacgtacatggcagcacgcgacgccgtcggcngtcaccccct 544 ||||||||||||| ||||||||||||||| || ||||||||| ||||| ||||||| Sbjct: 10095151 ctacgacacccgcaccaagacgtacatggccgcccgcgacgccatcggcgtcaaccccct 10095092 Query: 545 ctacttcggccggggcaccgacgg 568 |||| ||||| |||||| |||||| Sbjct: 10095091 ctacatcggcaggggcagcgacgg 10095068 Score = 143 bits (72), Expect = 8e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 326 ggccaatggagaaatctacaaccacaagaagatccggaagcagttcgccgccaagcacac 385 |||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 10095427 ggccaatggagagatctacaaccacaagaagatcaggaagcagttcgcctccaagcacac 10095368 Query: 386 cttcaccaccggcagcgactgcgaggtcataatccc 421 |||| |||||||||||||||||||||||| ||||| Sbjct: 10095367 gttcagcaccggcagcgactgcgaggtcatcatccc 10095332 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 103 ccaccatgtgtgggattctggccgtcctcggctgcgccgactcgtcgcaggctaagaggg 162 |||||||||| ||||| |||||||| |||||| |||||||| ||||||||| ||||||| Sbjct: 10096276 ccaccatgtgcgggatcctggccgtgctcggcgccgccgactggtcgcaggcgaagaggg 10096217 Query: 163 ctcgcgtcctctcgtgctcccgcaggc 189 ||| ||||||||| ||||||||||||| Sbjct: 10096216 ctcacgtcctctcctgctcccgcaggc 10096190
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Minus Query: 186 aggctgaagcacaggggaccggactggtccgggctgttccagtgcgagggcaacttcctg 245 |||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||| Sbjct: 41308 aggctgaagcacaggggacccgactggtccgggttgtaccagtgcgagggaaacttcctc 41249 Query: 246 gcgcagcagcggctcgccgtcgtctccccgctctccggtgaccagcccctctacaacgag 305 || |||||||| |||||| ||||||||||||||||||| |||||||| || ||||||| | Sbjct: 41248 gctcagcagcgtctcgccatcgtctccccgctctccggcgaccagccgctgtacaacgcg 41189 Query: 306 gaccgtaccgtcgtcgtcgtgg 327 ||||| ||| |||||||||||| Sbjct: 41188 gaccggaccatcgtcgtcgtgg 41167 Score = 153 bits (77), Expect = 8e-34 Identities = 127/144 (88%) Strand = Plus / Minus Query: 425 gtatgaggagtacggcgagaacttcgtcaacatgctggacggcgtcttctccttcgtact 484 ||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||| || Sbjct: 40832 gtatgaggagtacggcgaggacttcgtcgacatgctggacggcgtgttcgccttcgtcct 40773 Query: 485 gtacgacacccgcaacaagacgtacatggcagcacgcgacgccgtcggcngtcaccccct 544 ||||||||||||| ||||||||||||||| || ||||||||| ||||| ||||||| Sbjct: 40772 ctacgacacccgcaccaagacgtacatggccgcccgcgacgccatcggcgtcaaccccct 40713 Query: 545 ctacttcggccggggcaccgacgg 568 |||| ||||| |||||| |||||| Sbjct: 40712 ctacatcggcaggggcagcgacgg 40689 Score = 143 bits (72), Expect = 8e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 326 ggccaatggagaaatctacaaccacaagaagatccggaagcagttcgccgccaagcacac 385 |||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 41048 ggccaatggagagatctacaaccacaagaagatcaggaagcagttcgcctccaagcacac 40989 Query: 386 cttcaccaccggcagcgactgcgaggtcataatccc 421 |||| |||||||||||||||||||||||| ||||| Sbjct: 40988 gttcagcaccggcagcgactgcgaggtcatcatccc 40953 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 103 ccaccatgtgtgggattctggccgtcctcggctgcgccgactcgtcgcaggctaagaggg 162 |||||||||| ||||| |||||||| |||||| |||||||| ||||||||| ||||||| Sbjct: 41897 ccaccatgtgcgggatcctggccgtgctcggcgccgccgactggtcgcaggcgaagaggg 41838 Query: 163 ctcgcgtcctctcgtgctcccgcaggc 189 ||| ||||||||| ||||||||||||| Sbjct: 41837 ctcacgtcctctcctgctcccgcaggc 41811
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Minus Query: 186 aggctgaagcacaggggaccggactggtccgggctgttccagtgcgagggcaacttcctg 245 |||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||| Sbjct: 10093808 aggctgaagcacaggggacccgactggtccgggttgtaccagtgcgagggaaacttcctc 10093749 Query: 246 gcgcagcagcggctcgccgtcgtctccccgctctccggtgaccagcccctctacaacgag 305 || |||||||| |||||| ||||||||||||||||||| |||||||| || ||||||| | Sbjct: 10093748 gctcagcagcgtctcgccatcgtctccccgctctccggcgaccagccgctgtacaacgcg 10093689 Query: 306 gaccgtaccgtcgtcgtcgtgg 327 ||||| ||| |||||||||||| Sbjct: 10093688 gaccggaccatcgtcgtcgtgg 10093667 Score = 153 bits (77), Expect = 8e-34 Identities = 127/144 (88%) Strand = Plus / Minus Query: 425 gtatgaggagtacggcgagaacttcgtcaacatgctggacggcgtcttctccttcgtact 484 ||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||| || Sbjct: 10093332 gtatgaggagtacggcgaggacttcgtcgacatgctggacggcgtgttcgccttcgtcct 10093273 Query: 485 gtacgacacccgcaacaagacgtacatggcagcacgcgacgccgtcggcngtcaccccct 544 ||||||||||||| ||||||||||||||| || ||||||||| ||||| ||||||| Sbjct: 10093272 ctacgacacccgcaccaagacgtacatggccgcccgcgacgccatcggcgtcaaccccct 10093213 Query: 545 ctacttcggccggggcaccgacgg 568 |||| ||||| |||||| |||||| Sbjct: 10093212 ctacatcggcaggggcagcgacgg 10093189 Score = 143 bits (72), Expect = 8e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 326 ggccaatggagaaatctacaaccacaagaagatccggaagcagttcgccgccaagcacac 385 |||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 10093548 ggccaatggagagatctacaaccacaagaagatcaggaagcagttcgcctccaagcacac 10093489 Query: 386 cttcaccaccggcagcgactgcgaggtcataatccc 421 |||| |||||||||||||||||||||||| ||||| Sbjct: 10093488 gttcagcaccggcagcgactgcgaggtcatcatccc 10093453 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 103 ccaccatgtgtgggattctggccgtcctcggctgcgccgactcgtcgcaggctaagaggg 162 |||||||||| ||||| |||||||| |||||| |||||||| ||||||||| ||||||| Sbjct: 10094397 ccaccatgtgcgggatcctggccgtgctcggcgccgccgactggtcgcaggcgaagaggg 10094338 Query: 163 ctcgcgtcctctcgtgctcccgcaggc 189 ||| ||||||||| ||||||||||||| Sbjct: 10094337 ctcacgtcctctcctgctcccgcaggc 10094311
>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence Length = 2064 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 396 ggcagcgactgcgaggtcataatccctctgtatgaggagtacggcgagaacttcgtcaac 455 |||||||||||||||||||| | ||||| |||||| | || ||||||||| || || Sbjct: 341 ggcagcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaacttcatcgac 400 Query: 456 atgctggacggcgtcttctccttcgt 481 |||||||| || |||||||||||||| Sbjct: 401 atgctggatggtgtcttctccttcgt 426 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gaccagcccctctacaacgaggac 308 |||||||| ||||||||||||||| Sbjct: 233 gaccagccgctctacaacgaggac 256
>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1) mRNA, complete cds Length = 1815 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 396 ggcagcgactgcgaggtcataatccctctgtatgaggagtacggcgagaacttcgtcaac 455 |||||||||||||||||||| | ||||| |||||| | || ||||||||| || || Sbjct: 307 ggcagcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaacttcatcgac 366 Query: 456 atgctggacggcgtcttctccttcgt 481 |||||||| || |||||||||||||| Sbjct: 367 atgctggatggtgtcttctccttcgt 392 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gaccagcccctctacaacgaggac 308 |||||||| ||||||||||||||| Sbjct: 199 gaccagccgctctacaacgaggac 222
>gb|AF530460.1| Striga hermonthica asparagine synthetase (AS) mRNA, complete cds Length = 2278 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 106 ccatgtgtgggattctggccgtcctcggc 134 ||||||||||||||||||||||||||||| Sbjct: 245 ccatgtgtgggattctggccgtcctcggc 273
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine synthetase 1 mRNA, complete cds Length = 1973 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 396 ggcagcgactgcgaggtcataatccctctgtatgaggagtacggcgagaacttcgtcaac 455 |||||||||||||||||||| | ||||| |||||| | || ||||| ||| || || Sbjct: 357 ggcagcgactgcgaggtcatcgcacacctgtacgaggagcatggggagaatttcatcgac 416 Query: 456 atgctggacggcgtcttctccttcgt 481 |||||||| || |||||||||||||| Sbjct: 417 atgctggatggtgtcttctccttcgt 442
>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA sequence Length = 2119 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 393 accggcagcgactgcgaggtcataatccctctgtatgaggagtacggcgagaacttcgtc 452 |||||||| |||||||||||||| || |||||||||||| ||||| || | |||| | Sbjct: 352 accggcagtgactgcgaggtcatcgcccatctgtatgaggaatacggagaaagcttcatt 411 Query: 453 aacatgctggacggcgtcttctccttcgt 481 ||||| |||| || || ||||||||||| Sbjct: 412 gacatgttggatggtgttttctccttcgt 440 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 278 ctccggtgaccagcccctctacaacgaggac 308 |||||| |||||||| ||||||||||||||| Sbjct: 240 ctccggcgaccagccgctctacaacgaggac 270
>ref|XM_368275.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00969.4) partial mRNA Length = 1752 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 401 cgactgcgaggtcataatccctctgtat 428 ||||||||||||||| |||||||||||| Sbjct: 291 cgactgcgaggtcatcatccctctgtat 318
>gb|AY659330.1| Synthetic construct Peudomonas aeruginosa clone FLH037213.01F PA1989 gene, partial cds Length = 1146 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 241 tcctggcgcagcagcggctcgccg 264 |||||||||||||||||||||||| Sbjct: 233 tcctggcgcagcagcggctcgccg 210
>gb|AE004625.1| Pseudomonas aeruginosa PAO1, section 186 of 529 of the complete genome Length = 11871 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 241 tcctggcgcagcagcggctcgccg 264 |||||||||||||||||||||||| Sbjct: 4867 tcctggcgcagcagcggctcgccg 4844
>ref|XM_532473.2| PREDICTED: Canis familiaris similar to asparagine synthetase (LOC475240), mRNA Length = 1949 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 336 gaaatctacaaccacaagaagat 358 ||||||||||||||||||||||| Sbjct: 371 gaaatctacaaccacaagaagat 393
>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 278 ctccggtgaccagcccctctacaacgaggac 308 |||||| |||||||| ||||||||||||||| Sbjct: 171 ctccggcgaccagccgctctacaacgaggac 201 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 393 accggcagcgactgcgaggtcataatccctctgtatgagga 433 |||||||| |||||||||||||| || |||||||||||| Sbjct: 283 accggcagtgactgcgaggtcatcgcccatctgtatgagga 323
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 260 cgccgtcgtctccccgctctccggtga 286 ||||||||||||||| ||||||||||| Sbjct: 260860 cgccgtcgtctcccccctctccggtga 260886 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 260 cgccgtcgtctccccgctctccggtga 286 ||||||||||||||| ||||||||||| Sbjct: 243165 cgccgtcgtctcccccctctccggtga 243191
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 260 cgccgtcgtctccccgctctccggtga 286 ||||||||||||||| ||||||||||| Sbjct: 267858 cgccgtcgtctcccccctctccggtga 267884 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 260 cgccgtcgtctccccgctctccggtga 286 ||||||||||||||| ||||||||||| Sbjct: 250164 cgccgtcgtctcccccctctccggtga 250190
>ref|XM_519219.1| PREDICTED: Pan troglodytes similar to asparagine synthetase; glutamine-dependent asparagine synthetase; TS11 cell cycle control protein (LOC463556), mRNA Length = 1686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 222 caatggtgaaatctacaaccataagaagat 251
>ref|NM_183356.1| Homo sapiens asparagine synthetase (ASNS), transcript variant 3, mRNA Length = 2345 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 693 caatggtgaaatctacaaccataagaagat 722
>ref|NM_133436.1| Homo sapiens asparagine synthetase (ASNS), transcript variant 1, mRNA Length = 2348 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 696 caatggtgaaatctacaaccataagaagat 725
>ref|NM_001673.2| Homo sapiens asparagine synthetase (ASNS), transcript variant 2, mRNA Length = 1994 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 402 caatggtgaaatctacaaccataagaagat 431
>gb|BT019834.1| Synthetic construct Homo sapiens asparagine synthetase mRNA, partial cds Length = 1686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 222 caatggtgaaatctacaaccataagaagat 251
>gb|BC008723.2| Homo sapiens asparagine synthetase, transcript variant 3, mRNA (cDNA clone MGC:8639 IMAGE:2961551), complete cds Length = 2230 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 578 caatggtgaaatctacaaccataagaagat 607
>gb|BC014621.2| Homo sapiens asparagine synthetase, transcript variant 2, mRNA (cDNA clone MGC:4148 IMAGE:3010719), complete cds Length = 1959 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 349 caatggtgaaatctacaaccataagaagat 378
>ref|XM_959693.1| Neurospora crassa OR74A hypothetical protein (NCU00870.1) partial mRNA Length = 2175 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 cctccttcctcttcttcaacct 64 |||||||||||||||||||||| Sbjct: 1669 cctccttcctcttcttcaacct 1648
>ref|XM_325049.1| Neurospora crassa OR74A hypothetical protein (NCU00870.1) partial mRNA Length = 2175 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 cctccttcctcttcttcaacct 64 |||||||||||||||||||||| Sbjct: 1669 cctccttcctcttcttcaacct 1648
>gb|BC030024.1| Homo sapiens asparagine synthetase, mRNA (cDNA clone IMAGE:5266877), **** WARNING: chimeric clone **** Length = 3547 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 1842 caatggtgaaatctacaaccataagaagat 1871
>gb|BT008148.1| Synthetic construct Homo sapiens asparagine synthetase mRNA, partial cds Length = 1686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 222 caatggtgaaatctacaaccataagaagat 251
>gb|BT007113.1| Homo sapiens asparagine synthetase mRNA, complete cds Length = 1686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 222 caatggtgaaatctacaaccataagaagat 251
>emb|CR860360.1| Pongo pygmaeus mRNA; cDNA DKFZp459L2213 (from clone DKFZp459L2213) Length = 2006 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 375 caatggtgaaatctacaaccataagaagat 404
>emb|CR603522.1| full-length cDNA clone CS0DK008YP10 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1853 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 325 caatggtgaaatctacaaccataagaagat 354
>emb|CR600992.1| full-length cDNA clone CS0DF027YI13 of Fetal brain of Homo sapiens (human) Length = 1865 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 288 caatggtgaaatctacaaccataagaagat 317
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 ccgcgtcgtccgtcgccgcgtc 103 |||||||||||||||||||||| Sbjct: 4475434 ccgcgtcgtccgtcgccgcgtc 4475455
>gb|AY892780.1| Synthetic construct Homo sapiens clone FLH024640.01L asparagine synthetase (ASNS) mRNA, partial cds Length = 1686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 222 caatggtgaaatctacaaccataagaagat 251
>gb|AY890307.1| Synthetic construct Homo sapiens clone FLH024644.01X asparagine synthetase (ASNS) mRNA, complete cds Length = 1686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 222 caatggtgaaatctacaaccataagaagat 251
>gb|AY890306.1| Synthetic construct Homo sapiens clone FLH024643.01X asparagine synthetase (ASNS) mRNA, complete cds Length = 1686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 222 caatggtgaaatctacaaccataagaagat 251
>gb|AY891139.1| Synthetic construct Homo sapiens clone FLH009246.01L asparagine synthetase (ASNS) mRNA, partial cds Length = 1686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 222 caatggtgaaatctacaaccataagaagat 251
>dbj|AK000379.1| Homo sapiens cDNA FLJ20372 fis, clone HEP19727, highly similar to M27396 Human asparagine synthetase mRNA Length = 2306 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 696 caatggtgaaatctacaaccataagaagat 725
>gb|M27396.1|HUMASNS Human asparagine synthetase mRNA, complete cds Length = 1992 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 400 caatggtgaaatctacaaccataagaagat 429
>gb|M15798.1|HUMTS11 Human ts11 gene encoding a G-1 progression protein Length = 1864 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaagat 358 |||||| |||||||||||||| |||||||| Sbjct: 269 caatggtgaaatctacaaccataagaagat 298
>gb|BC050123.1| Mus musculus asparagine synthetase, mRNA (cDNA clone IMAGE:30028577) Length = 4268 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 2647 caatggtgaaatctacaaccacaag 2671
>gb|AC138300.8| Mus musculus chromosome 14, clone RP23-187B20, complete sequence Length = 213955 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 catcattcactcctccttcctcttc 56 ||||||||||| ||||||||||||| Sbjct: 147936 catcattcacttctccttcctcttc 147960
>gb|AC131997.23| Mus musculus chromosome 15, clone RP23-381H9, complete sequence Length = 194206 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttcaa 61 ||||||||||||||||||||| Sbjct: 61594 ctcctccttcctcttcttcaa 61614
>ref|XM_592021.2| PREDICTED: Bos taurus similar to asparagine synthetase, transcript variant 1 (LOC514209), mRNA Length = 1925 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gaaatctacaaccacaagaag 356 ||||||||||||||||||||| Sbjct: 346 gaaatctacaaccacaagaag 366
>ref|XM_865522.1| PREDICTED: Bos taurus similar to asparagine synthetase, transcript variant 2 (LOC514209), mRNA Length = 1859 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gaaatctacaaccacaagaag 356 ||||||||||||||||||||| Sbjct: 280 gaaatctacaaccacaagaag 300
>ref|XM_876205.1| PREDICTED: Bos taurus similar to asparagine synthetase, transcript variant 3 (LOC514209), mRNA Length = 1319 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gaaatctacaaccacaagaag 356 ||||||||||||||||||||| Sbjct: 346 gaaatctacaaccacaagaag 366
>ref|NM_012055.1| Mus musculus asparagine synthetase (Asns), mRNA Length = 1928 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 320 caatggtgaaatctacaaccacaag 344
>gb|BC116123.1| Bos taurus cDNA clone MGC:138980 IMAGE:8093903, complete cds Length = 1981 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 gaaatctacaaccacaagaag 356 ||||||||||||||||||||| Sbjct: 366 gaaatctacaaccacaagaag 386
>gb|AC129291.4| Mus musculus BAC clone RP24-491O22 from chromosome 6, complete sequence Length = 160373 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 90468 caatggtgaaatctacaaccacaag 90492
>gb|BC005552.1| Mus musculus asparagine synthetase, mRNA (cDNA clone MGC:5995 IMAGE:3585775), complete cds Length = 1943 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 317 caatggtgaaatctacaaccacaag 341
>dbj|AK160459.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810044J15 product:asparagine synthetase, full insert sequence Length = 1941 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 334 caatggtgaaatctacaaccacaag 358
>dbj|AK167524.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018I02 product:asparagine synthetase, full insert sequence Length = 1906 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 299 caatggtgaaatctacaaccacaag 323
>dbj|AK167933.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730041K10 product:asparagine synthetase, full insert sequence Length = 1923 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 318 caatggtgaaatctacaaccacaag 342
>ref|XM_625802.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_2090), partial mRNA Length = 1752 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 ctccttcctcttcttcaacctcatc 68 ||||||||||||||||||| ||||| Sbjct: 208 ctccttcctcttcttcaacttcatc 184
>dbj|AK076207.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830432P21 product:asparagine synthetase, full insert sequence Length = 1948 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 337 caatggtgaaatctacaaccacaag 361
>gb|U38940.1|MMU38940 Mus musculus asparagine synthetase mRNA, complete cds Length = 1928 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaag 353 |||||| |||||||||||||||||| Sbjct: 320 caatggtgaaatctacaaccacaag 344
>emb|AL732296.11| Mouse DNA sequence from clone RP23-131P6 on chromosome 2, complete sequence Length = 203503 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cactcctccttcctcttcttc 59 ||||||||||||||||||||| Sbjct: 111426 cactcctccttcctcttcttc 111406
>gb|AC145851.3| Dasypus novemcinctus clone VMRC5-509I16, complete sequence Length = 123145 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 tccttcctcttcttcaacct 64 |||||||||||||||||||| Sbjct: 36429 tccttcctcttcttcaacct 36410
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggcgcagcagcggctcgccg 264 |||||||||||||||||||| Sbjct: 525036 ggcgcagcagcggctcgccg 525055
>ref|XM_474061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2298 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ggcaacttcctggcgcagca 253 |||||||||||||||||||| Sbjct: 979 ggcaacttcctggcgcagca 998
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 gcgcagcagcggctcgccgtcgtc 269 |||||||||| ||||||||||||| Sbjct: 1779473 gcgcagcagcagctcgccgtcgtc 1779450
>gb|AF110520.1|MMHC425O18 Mus musculus major histocompatibility complex region NG27, NG28, RPS28, NADH oxidoreductase, NG29, KIFC1, Fas-binding protein, BING1, tapasin, RalGDS-like, KE2, BING4, beta 1,3-galactosyl transferase, and RPS18 genes, complete cds; Sacm21 gene, partial cds; and unknown gene Length = 213245 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 161575 ctcctccttcctcttcttca 161556
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcctccttcctcttcttcaa 61 |||||||||||||||||||| Sbjct: 598700 tcctccttcctcttcttcaa 598719
>gb|AY734459.1| Mus musculus strain ALR/Lt death-domain associated protein mRNA, partial cds Length = 1974 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1223 ctcctccttcctcttcttca 1204
>gb|AY734463.1|AY734461S3 Mus musculus strain ALS/Lt death domain-associated protein mRNA, partial cds Length = 274 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 237 ctcctccttcctcttcttca 218
>gb|AY734466.1| Mus musculus strain NOD/Lt death domain-associated protein mRNA, partial cds Length = 2199 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1414 ctcctccttcctcttcttca 1395
>gb|AY734465.1| Mus musculus strain CTS/ShiLt death domain-associated protein mRNA, partial cds Length = 1949 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1134 ctcctccttcctcttcttca 1115
>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0064H09, complete sequence Length = 146742 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ccgtcgtcgtcgtggccaatggag 336 ||||||||||||| |||||||||| Sbjct: 16897 ccgtcgtcgtcgtcgccaatggag 16874
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0082P17, complete sequence Length = 157539 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ccgtcgtcgtcgtggccaatggag 336 ||||||||||||| |||||||||| Sbjct: 124515 ccgtcgtcgtcgtcgccaatggag 124492
>gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chromosome 2, complete sequence Length = 139973 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 64485 caatggtgaaatctacaaccataagaag 64458
>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete sequence Length = 211457 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 61919 caatggtgaaatctacaaccataagaag 61946
>gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome 7, complete sequence Length = 175603 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 21726 ctcctccttcctcttcttca 21745
>gb|AC134610.5| Mus musculus BAC clone RP23-79B24 from chromosome 13, complete sequence Length = 235557 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 163811 ctcctccttcctcttcttca 163792
>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete sequence Length = 179528 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 142074 caatggtgaaatctacaaccataagaag 142047
>ref|NM_007829.2| Mus musculus Fas death domain-associated protein (Daxx), mRNA Length = 2674 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1757 ctcctccttcctcttcttca 1738
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 tcctggcgcagcagcggctcgccg 264 |||||||||| ||||||||||||| Sbjct: 5539619 tcctggcgcaccagcggctcgccg 5539596
>gb|AC102312.11| Mus musculus chromosome 10, clone RP24-428L4, complete sequence Length = 182940 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 161588 ctcctccttcctcttcttca 161569
>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete sequence Length = 192494 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 159485 caatggtgaaatctacaaccataagaag 159512
>emb|CR974462.5| Mouse DNA sequence from clone RP23-222K15 on chromosome 17, complete sequence Length = 228057 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 5979 ctcctccttcctcttcttca 5960
>ref|XM_568108.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNL05750) partial mRNA Length = 2594 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcctccttcctcttcttcaa 61 |||||||||||||||||||| Sbjct: 2500 tcctccttcctcttcttcaa 2481
>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence Length = 181083 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 45376 ctcctccttcctcttcttca 45395
>gb|AC092107.5| Homo sapiens BAC clone RP11-755J8 from UL, complete sequence Length = 137617 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 113733 caatggtgaaatctacaaccataagaag 113706
>gb|AC079781.7| Homo sapiens BAC clone RP11-380G21 from 7, complete sequence Length = 97556 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 21642 caatggtgaaatctacaaccataagaag 21615
>gb|AC005326.2| Homo sapiens PAC clone RP5-1090P18 from 7, complete sequence Length = 122130 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 95492 caatggtgaaatctacaaccataagaag 95465
>gb|AC107750.9| Mus musculus chromosome 13, clone RP23-249C3, complete sequence Length = 220740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 143292 ctcctccttcctcttcttca 143311
>gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome 6, complete sequence Length = 212166 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcattcactcctccttcctc 53 |||||||||||||||||||| Sbjct: 34456 tcattcactcctccttcctc 34475
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 103 ccaccatgtgtgggattctggccgtcctcggctgcg 138 |||| |||||||||||||| || ||||| ||||||| Sbjct: 70409 ccactatgtgtgggattcttgctgtcctaggctgcg 70374
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 tcctggcgcagcagcggctcgccg 264 |||| ||||||||||||||||||| Sbjct: 1748803 tcctcgcgcagcagcggctcgccg 1748780
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 tcctggcgcagcagcggctcgccg 264 |||| ||||||||||||||||||| Sbjct: 1944862 tccttgcgcagcagcggctcgccg 1944839
>gb|AC145212.1| Homo sapiens BAC clone RP11-1368F8 from UL, complete sequence Length = 191469 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 38588 caatggtgaaatctacaaccataagaag 38615
>emb|AL031290.1|HS774I24 Human DNA sequence from clone RP4-774I24 on chromosome 1q24.1-24.3 Contains the 3' end of the PLAC3 gene for placenta-specific 3 (PLAC3) and the 3' end of the ASTN gene for astrotactin, complete sequence Length = 121780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcctccttcctcttcttcaa 61 |||||||||||||||||||| Sbjct: 93126 tcctccttcctcttcttcaa 93145
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cctggcgcagcagcggctcg 261 |||||||||||||||||||| Sbjct: 1526785 cctggcgcagcagcggctcg 1526766
>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 20928 ctcctccttcctcttcttca 20909
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggcgcagcagcggctcgccg 264 |||||||||||||||||||| Sbjct: 133037 ggcgcagcagcggctcgccg 133056
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ggcaacttcctggcgcagca 253 |||||||||||||||||||| Sbjct: 143612 ggcaacttcctggcgcagca 143593
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ggcaacttcctggcgcagca 253 |||||||||||||||||||| Sbjct: 19899 ggcaacttcctggcgcagca 19880
>emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 in linkage group 20 Contains the gene for a novel protein similar to vertebrate delta-like 4 (Drosophila) (DLL4), the vps18 gene for vacuolar protein sorting protein 18, the gene for a novel protein containing an SNF2 family N-terminal domain and a Helicase conserved C-terminal domain, the gene for a novel protein similar to vertebrate ras homolog gene family, member V (RHOV), the gene for a novel protein containing a ChaC-like protein domain and three CpG islands, complete sequence Length = 170125 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcctccttcctcttcttcaa 61 |||||||||||||||||||| Sbjct: 107971 tcctccttcctcttcttcaa 107952
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 tcctggcgcagcagcggctcgccg 264 |||||||||| ||||||||||||| Sbjct: 6469753 tcctggcgcaccagcggctcgccg 6469730
>emb|CR759734.3| Zebrafish DNA sequence from clone CH211-140L7 in linkage group 20, complete sequence Length = 185855 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcctccttcctcttcttcaa 61 |||||||||||||||||||| Sbjct: 33753 tcctccttcctcttcttcaa 33772
>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete sequence Length = 158069 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 91308 caatggtgaaatctacaaccataagaag 91281
>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete sequence Length = 152296 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 9576 caatggtgaaatctacaaccataagaag 9603
>dbj|AK126106.1| Homo sapiens cDNA FLJ44118 fis, clone TESTI4047069 Length = 3330 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 721 caatggtgaaatctacaaccataagaag 748
>gb|AC125394.27| Pan troglodytes clone rp43-45i3, complete sequence Length = 214480 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 152706 caatggtgaaatctacaaccataagaag 152679
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ggcgcagcagcggctcgccg 264 |||||||||||||||||||| Sbjct: 1530668 ggcgcagcagcggctcgccg 1530649
>dbj|AK144332.1| Mus musculus 13 days embryo brain cDNA, RIKEN full-length enriched library, clone:G630023I18 product:Fas death domain-associated protein, full insert sequence Length = 2508 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1592 ctcctccttcctcttcttca 1573
>dbj|AK133863.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730465D23 product:Fas death domain-associated protein, full insert sequence Length = 2483 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1567 ctcctccttcctcttcttca 1548
>dbj|AK146743.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920049C11 product:Fas death domain-associated protein, full insert sequence Length = 2434 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1586 ctcctccttcctcttcttca 1567
>dbj|AK145906.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530012P16 product:Fas death domain-associated protein, full insert sequence Length = 2511 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1590 ctcctccttcctcttcttca 1571
>dbj|AK151279.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830027K01 product:Fas death domain-associated protein, full insert sequence Length = 2501 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1580 ctcctccttcctcttcttca 1561
>dbj|AK153149.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830125F15 product:Fas death domain-associated protein, full insert sequence Length = 2395 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1547 ctcctccttcctcttcttca 1528
>dbj|AK156425.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830021G05 product:Fas death domain-associated protein, full insert sequence Length = 2674 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1757 ctcctccttcctcttcttca 1738
>dbj|AK172616.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830219O06 product:Fas death domain-associated protein, full insert sequence Length = 2677 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1760 ctcctccttcctcttcttca 1741
>ref|XM_625591.1| Cryptosporidium parvum Iowa II Swi/SNf2 RAD26 (cgd5_4290), partial mRNA Length = 3546 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcctccttcctcttcttcaa 61 |||||||||||||||||||| Sbjct: 102 tcctccttcctcttcttcaa 83
>gb|AC069074.11| Mus musculus 10 BAC RP23-243G3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190081 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 89466 ctcctccttcctcttcttca 89485
>gb|AC159267.2| Mus musculus BAC clone RP23-460B2 from chromosome 14, complete sequence Length = 204629 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 197236 ctcctccttcctcttcttca 197255
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tcctggcgcagcagcggctc 260 |||||||||||||||||||| Sbjct: 3514587 tcctggcgcagcagcggctc 3514606
>dbj|AK090356.1| Mus musculus 8 days neonate male testis cDNA, RIKEN full-length enriched library, clone:G630063K14 product:Fas death domain-associated protein, full insert sequence Length = 2321 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1467 ctcctccttcctcttcttca 1448
>emb|CR353105.1| Gallus gallus finished cDNA, clone ChEST239p16 Length = 1055 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 185 ctcctccttcctcttcttca 166
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ggcaacttcctggcgcagca 253 |||||||||||||||||||| Sbjct: 32624878 ggcaacttcctggcgcagca 32624859
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ccgtcgtcgtcgtggccaatggag 336 ||||||||||||| |||||||||| Sbjct: 26714439 ccgtcgtcgtcgtcgccaatggag 26714416
>gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosome 14, complete sequence Length = 217099 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 25674 ctcctccttcctcttcttca 25655
>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete sequence Length = 223861 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 189203 ctcctccttcctcttcttca 189222
>gb|AY029259.1| Hordeum vulgare alpha-L-arabinofuranosidase/beta-D-xylosidase isoenzyme ARA-I mRNA, complete cds Length = 2647 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ggcaacttcctggcgcagca 253 |||||||||||||||||||| Sbjct: 1055 ggcaacttcctggcgcagca 1074
>gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete sequence Length = 127075 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 65247 caatggtgaaatctacaaccataagaag 65220
>dbj|AK213512.1| Mus musculus cDNA, clone:Y2G0128I23, strand:unspecified Length = 217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 86 ctcctccttcctcttcttca 67
>gb|AC148028.2| Homo sapiens chromosome UNKNOWN clone RP11-238G20, complete sequence Length = 172857 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 32666 caatggtgaaatctacaaccataagaag 32693
>gb|U84118.1|AAU84118 Aedes aegypti asparagine synthetase mRNA, complete cds Length = 2169 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 gtggccaatggagaaatctacaac 347 ||||||||||| |||||||||||| Sbjct: 355 gtggccaatggtgaaatctacaac 378
>dbj|AK101782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065A06, full insert sequence Length = 2821 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ggcaacttcctggcgcagca 253 |||||||||||||||||||| Sbjct: 1148 ggcaacttcctggcgcagca 1167
>dbj|AK071973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088J07, full insert sequence Length = 1746 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ggcaacttcctggcgcagca 253 |||||||||||||||||||| Sbjct: 109 ggcaacttcctggcgcagca 128
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcctggcgcagcagcggctcgccg 264 |||| ||||||||||||||||||| Sbjct: 1092505 tccttgcgcagcagcggctcgccg 1092528
>emb|BX537286.4| Zebrafish DNA sequence from clone DKEY-28J4 in linkage group 4, complete sequence Length = 179930 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 atcattcactcctccttcctcttc 56 |||||||||||||||| ||||||| Sbjct: 10472 atcattcactcctcctgcctcttc 10449
>emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in linkage group 20, complete sequence Length = 223182 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcctccttcctcttcttcaa 61 |||||||||||||||||||| Sbjct: 115194 tcctccttcctcttcttcaa 115175
>gb|AY107548.1| Zea mays PCO115175 mRNA sequence Length = 364 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ctggccgtcctcggctgcgc 139 |||||||||||||||||||| Sbjct: 60 ctggccgtcctcggctgcgc 79
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 gcgcagcagcggctcgccgtcgtc 269 |||||| ||||||||||||||||| Sbjct: 2776907 gcgcaggagcggctcgccgtcgtc 2776930
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ggcgcagcagcggctcgccg 264 |||||||||||||||||||| Sbjct: 2724061 ggcgcagcagcggctcgccg 2724042
>gb|AF006040.1|AF006040 Mus musculus Fas-binding protein (Daxx) mRNA, complete cds Length = 2360 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1510 ctcctccttcctcttcttca 1491
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 ccgtcgtcgtcgtggccaatggag 336 ||||||||||||| |||||||||| Sbjct: 27039502 ccgtcgtcgtcgtcgccaatggag 27039479
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 agttcgccgccaagcacaccttca 390 |||||| ||||||||||||||||| Sbjct: 79280 agttcgtcgccaagcacaccttca 79303
>emb|AJ586811.1| Coriobacterium sp. 3WC8.1 16S rRNA gene, strain 3WC8.1 Length = 1378 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tccgccccccgaaccccgcg 86 |||||||||||||||||||| Sbjct: 572 tccgccccccgaaccccgcg 591
>emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chromosome 14, complete sequence Length = 181740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 43227 ctcctccttcctcttcttca 43246
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 cttcctcttcttcaacctcatccgcccc 74 |||||||||||||| |||||||| |||| Sbjct: 183063 cttcctcttcttcatcctcatcctcccc 183090
>emb|Z46906.1|SSGGTPEP Sus scrofa Length = 16331 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ccttcctcttcttcaacctcatcc 69 ||||||||| |||||||||||||| Sbjct: 14392 ccttcctctccttcaacctcatcc 14369
>gb|M27054.1|HUMTS11Z Homo sapiens asparagine synthetase (TS11) gene, exons 1-3 and promoter region Length = 5008 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 4901 caatggtgaaatctacaaccataagaag 4928
>gb|L35936.1|HUMASNS03 Human asparagine synthetase (ASNS) gene, exon 2 Length = 288 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 caatggagaaatctacaaccacaagaag 356 |||||| |||||||||||||| |||||| Sbjct: 251 caatggtgaaatctacaaccataagaag 278
>dbj|D10158.1|RCHCHIT2 R. oligosporus chi2 gene for chitinase, complete cds Length = 2119 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctcctccttcctcttcttca 60 |||||||||||||||||||| Sbjct: 1354 ctcctccttcctcttcttca 1373 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,653,883 Number of Sequences: 3902068 Number of extensions: 3653883 Number of successful extensions: 85784 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84232 Number of HSP's gapped (non-prelim): 1552 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)