ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart24d04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 837 bits (422), Expect = 0.0 Identities = 476/494 (96%) Strand = Plus / Plus Query: 90 tagctagcgtggaggcgtccaaggtgggagacccaagcacaggctagctagccgaccagc 149 ||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1 tagctcgcgtggaggtgtccaaggtgggagacccaagcacgggctagctagccgaccagc 60 Query: 150 tgctccaccggagccgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgg 209 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 tgctccgccggagccgatggctggcgccgacgtcgacgtcgggacggagctcaggctcgg 120 Query: 210 gctgccgggaggcggcgccgaggcggccaaggccgggaagaggggctatgaggacaccat 269 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gctgcccgggggcggcgccgaggcggccaaggccgggaagaggggctatgaggacaccat 180 Query: 270 tgacttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga 329 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 181 tgacttgaagctcacgctgcccaccggcggcatgcaggaagactctgccggcaagccgga 240 Query: 330 gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagcc 389 ||| || |||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 241 gccagccgccgacaaggccaagaggcccgctgaggccgcggccgccgaccccgagaagcc 300 Query: 390 acctgctcccaaggcacaggctgtgggttggccaccagtccggtcgtaccgcaggaacgc 449 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 301 acctgctcccaaggcacaggccgtgggttggccaccagtccggtcgtaccgcaggaacgc 360 Query: 450 catgaccgtccaatcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgc 509 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 catgaccgtccagtcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgc 420 Query: 510 tgctaccgctgctgctggcgccaacggctccaactttgtcaaggtgagcatggacggcgc 569 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tgctgccgctgctgctggtgccaacggctccaactttgtcaaggtgagcatggacggcgc 480 Query: 570 gccctacctgcgca 583 |||||||||||||| Sbjct: 481 gccctacctgcgca 494
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 280 bits (141), Expect = 5e-72 Identities = 303/357 (84%), Gaps = 15/357 (4%) Strand = Plus / Plus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 99 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 158 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 159 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 218 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 219 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 278 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 279 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 338 Query: 389 cacctgctcccaaggcacaggctgtgggttggccaccagtccggtcgtaccgcaggaacg 448 |||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||| Sbjct: 339 cacctgctcccaaggcgcaggcagtgggttggccaccagttcggtcgttccgcaggaaca 398 Query: 449 ccatgaccgtccaatcggtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 |||||||||||| || ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 399 tcatgaccgtccagtcagtgaagagcaagaaggaagaggaagctgacaagcagcagc 455 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 503 aaggtcagcatggacggggcaccctacctgcgca 536
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 280 bits (141), Expect = 5e-72 Identities = 303/357 (84%), Gaps = 15/357 (4%) Strand = Plus / Plus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 154 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 213 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 214 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 273 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 274 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 333 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 334 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 393 Query: 389 cacctgctcccaaggcacaggctgtgggttggccaccagtccggtcgtaccgcaggaacg 448 |||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||| Sbjct: 394 cacctgctcccaaggcgcaggcagtgggttggccaccagttcggtcgttccgcaggaaca 453 Query: 449 ccatgaccgtccaatcggtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 |||||||||||| || ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 454 tcatgaccgtccagtcagtgaagagcaagaaggaagaggaagctgacaagcagcagc 510 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 558 aaggtcagcatggacggggcaccctacctgcgca 591
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 280 bits (141), Expect = 5e-72 Identities = 303/357 (84%), Gaps = 15/357 (4%) Strand = Plus / Plus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 151 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 210 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 211 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 270 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 271 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 330 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 331 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 390 Query: 389 cacctgctcccaaggcacaggctgtgggttggccaccagtccggtcgtaccgcaggaacg 448 |||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||| Sbjct: 391 cacctgctcccaaggcgcaggcagtgggttggccaccagttcggtcgttccgcaggaaca 450 Query: 449 ccatgaccgtccaatcggtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 |||||||||||| || ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 451 tcatgaccgtccagtcagtgaagagcaagaaggaagaggaagctgacaagcagcagc 507 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 555 aaggtcagcatggacggggcaccctacctgcgca 588
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 280 bits (141), Expect = 5e-72 Identities = 303/357 (84%), Gaps = 15/357 (4%) Strand = Plus / Plus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 160 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 219 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 220 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 279 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 280 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 339 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 340 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 399 Query: 389 cacctgctcccaaggcacaggctgtgggttggccaccagtccggtcgtaccgcaggaacg 448 |||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||| Sbjct: 400 cacctgctcccaaggcgcaggcagtgggttggccaccagttcggtcgttccgcaggaaca 459 Query: 449 ccatgaccgtccaatcggtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 |||||||||||| || ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 460 tcatgaccgtccagtcagtgaagagcaagaaggaagaggaagctgacaagcagcagc 516 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 564 aaggtcagcatggacggggcaccctacctgcgca 597
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 280 bits (141), Expect = 5e-72 Identities = 303/357 (84%), Gaps = 15/357 (4%) Strand = Plus / Plus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 156 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 215 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 216 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 275 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 276 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 335 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 336 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 395 Query: 389 cacctgctcccaaggcacaggctgtgggttggccaccagtccggtcgtaccgcaggaacg 448 |||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||| Sbjct: 396 cacctgctcccaaggcgcaggcagtgggttggccaccagttcggtcgttccgcaggaaca 455 Query: 449 ccatgaccgtccaatcggtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 |||||||||||| || ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 456 tcatgaccgtccagtcagtgaagagcaagaaggaagaggaagctgacaagcagcagc 512 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 560 aaggtcagcatggacggggcaccctacctgcgca 593
>gb|AY622360.1| Psathyrostachys juncea clone RW-150 EST-SRR marker sequence Length = 174 Score = 196 bits (99), Expect = 6e-47 Identities = 116/121 (95%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 6 tcggttaagatcaagaaggaggaggagaccgagaagcagcagcctgctgc---cgctgct 62 Query: 523 gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 582 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 gctggtgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 122 Query: 583 a 583 | Sbjct: 123 a 123
>gb|AY622365.1| Triticum aestivum clone WH-150 EST-SRR marker sequence Length = 174 Score = 188 bits (95), Expect = 1e-44 Identities = 115/121 (95%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 6 tcggttaagatcaagaaggaggaggagaccgagaagcagcagcctgctgg---cgccgct 62 Query: 523 gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 122 Query: 583 a 583 | Sbjct: 123 a 123
>gb|AY622364.1| Thinopyrum ponticum clone TW-150 EST-SRR marker sequence Length = 174 Score = 188 bits (95), Expect = 1e-44 Identities = 115/121 (95%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6 tcggttaagatcaagaaggaggaggagaccgagaagcagcagcctgctgcgaccgctgct 65 Query: 523 gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 582 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 ggtg---ccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 122 Query: 583 a 583 | Sbjct: 123 a 123
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 186 bits (94), Expect = 5e-44 Identities = 214/254 (84%), Gaps = 15/254 (5%) Strand = Plus / Minus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 30190671 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 30190612 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 30190611 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 30190552 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 30190551 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 30190492 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 30190491 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 30190432 Query: 389 cacctgctcccaag 402 |||||||||||||| Sbjct: 30190431 cacctgctcccaag 30190418 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 406 caggctgtgggttggccaccagtccggtcgtaccgcaggaacgccatgaccgtccaatcg 465 ||||| ||||||||||||||||| ||||||| |||||||||| |||||||||||| || Sbjct: 30189330 caggcagtgggttggccaccagttcggtcgttccgcaggaacatcatgaccgtccagtca 30189271 Query: 466 gtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 30189270 gtgaagagcaagaaggaagaggaagctgacaagcagcagc 30189231 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||||||||| |||||| Sbjct: 24086320 aaggtgagcatggacggcgcgccgtacctg 24086291 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||| ||||| ||||| |||| Sbjct: 32942910 aaggtgagcatggacggggcgccatacctccgca 32942877 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 30189183 aaggtcagcatggacggggcaccctacctgcgca 30189150 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||| ||||| |||||| Sbjct: 24100621 aaggtgagcatggacggggcgccgtacctg 24100650
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 186 bits (94), Expect = 5e-44 Identities = 214/254 (84%), Gaps = 15/254 (5%) Strand = Plus / Plus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 33224 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 33283 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 33284 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 33343 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 33344 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 33403 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 33404 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 33463 Query: 389 cacctgctcccaag 402 |||||||||||||| Sbjct: 33464 cacctgctcccaag 33477 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 406 caggctgtgggttggccaccagtccggtcgtaccgcaggaacgccatgaccgtccaatcg 465 ||||| ||||||||||||||||| ||||||| |||||||||| |||||||||||| || Sbjct: 34565 caggcagtgggttggccaccagttcggtcgttccgcaggaacatcatgaccgtccagtca 34624 Query: 466 gtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 34625 gtgaagagcaagaaggaagaggaagctgacaagcagcagc 34664 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 34712 aaggtcagcatggacggggcaccctacctgcgca 34745
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 186 bits (94), Expect = 5e-44 Identities = 214/254 (84%), Gaps = 15/254 (5%) Strand = Plus / Plus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 2148 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 2207 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 2208 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 2267 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 2268 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 2327 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 2328 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 2387 Query: 389 cacctgctcccaag 402 |||||||||||||| Sbjct: 2388 cacctgctcccaag 2401 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 406 caggctgtgggttggccaccagtccggtcgtaccgcaggaacgccatgaccgtccaatcg 465 ||||| ||||||||||||||||| ||||||| |||||||||| |||||||||||| || Sbjct: 3490 caggcagtgggttggccaccagttcggtcgttccgcaggaacatcatgaccgtccagtca 3549 Query: 466 gtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 3550 gtgaagagcaagaaggaagaggaagctgacaagcagcagc 3589 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 3637 aaggtcagcatggacggggcaccctacctgcgca 3670
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 186 bits (94), Expect = 5e-44 Identities = 214/254 (84%), Gaps = 15/254 (5%) Strand = Plus / Minus Query: 164 cgatggctggcgccgatgtcgacgtcgggacggagctcaggctcgggctgccggga---- 219 ||||||| |||||||| || |||||||||||||||||| |||| |||||||| ||| Sbjct: 30282093 cgatggccggcgccgacgtggacgtcgggacggagctccggctggggctgcccggaggtg 30282034 Query: 220 -----ggcggcgccgaggcgg---ccaaggccgggaagaggggctatgaggacaccattg 271 |||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct: 30282033 gcggcggcgccgccgaggcggcggccaaggccgcgaagaggggcttcgaggagaccattg 30281974 Query: 272 acttgaagctgacgctgcccaccggcggcatgcaggaagactccgccggcaagccgga-- 329 || ||||||||| ||||||||||| ||||||| |||| | | ||||||||||| |||| Sbjct: 30281973 acctgaagctgaagctgcccaccgccggcatggaggaggccgccgccggcaaggcggagg 30281914 Query: 330 -gccggcagccgacaaggccaagaggccggcagaggccgcggccgctgaccccgagaagc 388 |||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct: 30281913 cgccggccgccgagaaggccaagaggccggcggaggccgccgccgccgacgccgagaagc 30281854 Query: 389 cacctgctcccaag 402 |||||||||||||| Sbjct: 30281853 cacctgctcccaag 30281840 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 406 caggctgtgggttggccaccagtccggtcgtaccgcaggaacgccatgaccgtccaatcg 465 ||||| ||||||||||||||||| ||||||| |||||||||| |||||||||||| || Sbjct: 30280752 caggcagtgggttggccaccagttcggtcgttccgcaggaacatcatgaccgtccagtca 30280693 Query: 466 gtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 30280692 gtgaagagcaagaaggaagaggaagctgacaagcagcagc 30280653 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||||||||| |||||| Sbjct: 24003789 aaggtgagcatggacggcgcgccgtacctg 24003760 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||| ||||| ||||| |||| Sbjct: 33033420 aaggtgagcatggacggggcgccatacctccgca 33033387 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 30280605 aaggtcagcatggacggggcaccctacctgcgca 30280572 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||| ||||| |||||| Sbjct: 24016908 aaggtgagcatggacggggcgccgtacctg 24016937
>gb|AY622361.1| Bromus inermis clone SB-150 EST-SRR marker sequence Length = 171 Score = 163 bits (82), Expect = 8e-37 Identities = 111/121 (91%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 6 tcggttaagatcaagaaggaagaggagaccgagaagcagcagcctgctgccac------t 59 Query: 523 gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 582 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gctggtgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 119 Query: 583 a 583 | Sbjct: 120 a 120
>gb|AY847064.1| Avena sativa Aux/IAA3 mRNA, partial cds Length = 360 Score = 151 bits (76), Expect = 3e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 415 ggttggccaccagtccggtcgtaccgcaggaacgccatgaccgtccaatcggtgaagatc 474 ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||| Sbjct: 13 ggttggccaccagtccgatcataccgcaggaacgccatgaccgtccagtcggtgaagatc 72 Query: 475 aagaaggaggaggagaccgagaagcagcagcctgct 510 |||||||| ||||| ||||||||||||||||||||| Sbjct: 73 aagaaggaagaggaaaccgagaagcagcagcctgct 108 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcgccaacggctccaactttgtcaaggtgagcatggacg 565 |||||||| | ||| |||| || | ||||||||| |||||| |||||||||||||||| Sbjct: 125 ctgctgctgctgctactgccggtggcaacggctctgcctttgtgaaggtgagcatggacg 184 Query: 566 gcgcgccctacctgcgca 583 | |||||||||||||||| Sbjct: 185 gtgcgccctacctgcgca 202
>gb|AY622354.1| Lolium temulentum clone LT-150 EST-SRR marker sequence Length = 176 Score = 137 bits (69), Expect = 5e-29 Identities = 109/121 (90%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||||||||||||||||||||||||| ||||||| | ||| || Sbjct: 6 tcggttaagatcaagaaggaggaggagaccgagaagcagcagt-tgctgctgctgctact 64 Query: 523 gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 582 ||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 65 gctggtggcaacggctctgcctttgtgaaggtgagcatggacggcgcgccctacctgcgc 124 Query: 583 a 583 | Sbjct: 125 a 125
>gb|AY622356.1| Dactylis glomerata clone OG-150 EST-SRR marker sequence Length = 174 Score = 133 bits (67), Expect = 7e-28 Identities = 108/121 (89%), Gaps = 3/121 (2%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||| Sbjct: 6 tcggttaagatcaagaaggaagaggaaaccgagaagcagcagcctgctgct---gctgct 62 Query: 523 gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 582 || | ||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 63 gcggctgccaacggctctgcctttgtgaaggtgagcatggacggcgcgccctacctgcgc 122 Query: 583 a 583 | Sbjct: 123 a 123
>gb|AY622358.1| Festuca rubra clone RF-150 EST-SRR marker sequence Length = 177 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||| ||||| ||| |||||||||||||||||||| | || || Sbjct: 6 tcggttaagatcaagaaggaagaggaaaccaagaagcagcagcctgctgctgctcctact 65 Query: 523 gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctgcgc 582 ||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 66 gctggtggcaacggctctgcctttgtgaaggtgagcatggacggcgcgccctacctgcgc 125 Query: 583 a 583 | Sbjct: 126 a 126
>gb|AY622357.1| Lolium perenne clone PR-150 EST-SRR marker sequence Length = 180 Score = 123 bits (62), Expect = 7e-25 Identities = 109/124 (87%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||| ||||| ||||||||||||||||||| |||| | |||||| Sbjct: 6 tcggttaagatcaagaaggaagaggaaaccgagaagcagcagcctgttgctgctgctgct 65 Query: 523 ---gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctg 579 ||||| | ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 66 actgctggtggcaacggctctgcctttgtgaaggtgagcatggacggcgcgccctacctg 125 Query: 580 cgca 583 |||| Sbjct: 126 cgca 129
>gb|AY622353.1| Lolium multiflorum clone IR-150 EST-SRR marker sequence Length = 180 Score = 123 bits (62), Expect = 7e-25 Identities = 109/124 (87%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||| ||||| ||||||||||||||||||| |||| | |||||| Sbjct: 6 tcggttaagatcaagaaggaagaggaaaccgagaagcagcagcctgttgctgctgctgct 65 Query: 523 ---gctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctg 579 ||||| | ||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 66 actgctggtggcaacggctctgcctttgtgaaggtgagcatggacggcgcgccctacctg 125 Query: 580 cgca 583 |||| Sbjct: 126 cgca 129
>gb|AY622355.1| Schedonorus pratensis clone MF-150 EST-SRR marker sequence Length = 180 Score = 115 bits (58), Expect = 2e-22 Identities = 108/124 (87%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctg-- 520 ||||| |||||||||||||| ||||| |||||||||||||||||||||||| | |||| Sbjct: 6 tcggttaagatcaagaaggaagaggaaaccgagaagcagcagcctgctgctgctgctgct 65 Query: 521 -ctgctggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccctacctg 579 ||||||| | |||| |||| |||||| |||||||||||||||||||| ||||||||| Sbjct: 66 actgctggtggcaacagctctgcctttgtgaaggtgagcatggacggcgcaccctacctg 125 Query: 580 cgca 583 |||| Sbjct: 126 cgca 129
>dbj|AK102769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107G01, full insert sequence Length = 3241 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 406 caggctgtgggttggccaccagtccggtcgtaccgcaggaacgccatgaccgtccaatcg 465 ||||| ||||||||||||||||| ||||||| |||||||||| |||||||||||| || Sbjct: 2907 caggcagtgggttggccaccagttcggtcgttccgcaggaacatcatgaccgtccagtca 2848 Query: 466 gtgaagatcaagaaggaggaggagaccgagaagcagcagc 505 ||||||| ||||||||| ||||| | || |||||||||| Sbjct: 2847 gtgaagagcaagaaggaagaggaagctgacaagcagcagc 2808 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| ||||||||||| || ||||||||||||| Sbjct: 2760 aaggtcagcatggacggggcaccctacctgcgca 2727
>gb|AY622362.1| Schedonorus arundinaceus clone TFS-150 EST-SRR marker sequence Length = 186 Score = 91.7 bits (46), Expect = 2e-15 Identities = 108/130 (83%), Gaps = 9/130 (6%) Strand = Plus / Plus Query: 463 tcggtgaagatcaagaaggaggaggagaccgagaagcagcagcctgctgctaccgctgct 522 ||||| |||||||||||||| ||||| |||||||||||||||||||||||| | |||||| Sbjct: 6 tcggttaagatcaagaaggaagaggaaaccgagaagcagcagcctgctgctgctgctgct 65 Query: 523 gc---------tggcgccaacggctccaactttgtcaaggtgagcatggacggcgcgccc 573 || ||| | ||||||||| |||||| ||||||||||||||||| || ||| Sbjct: 66 gctgctactgctggtggcaacggctctgcctttgtgaaggtgagcatggacggtgcaccc 125 Query: 574 tacctgcgca 583 |||||||||| Sbjct: 126 tacctgcgca 135
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||||||||| |||||||||| Sbjct: 25346749 aaggtgagcatggacggcgcgccatacctgcgca 25346716 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 192 gacggagctcaggctcgggctgccggg 218 ||||||||| ||||||||||||||||| Sbjct: 25359297 gacggagctgaggctcgggctgccggg 25359323
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||||||||| |||||||||| Sbjct: 742 aaggtgagcatggacggcgcgccatacctgcgca 775 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 365 ccgcggccgctgaccccgagaagccacctgctcccaaggcacaggctgtgggttggccac 424 |||| ||||| ||||||||||||||| |||||||||||||||| || || ||||| | Sbjct: 569 ccgccgccgccgaccccgagaagccaagggctcccaaggcacaggtggttgggtggccgc 628 Query: 425 cagtccggtcgtaccg 440 | |||||||| ||||| Sbjct: 629 cggtccggtcataccg 644
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||| |||||||||||||||||||||||| Sbjct: 652 aaggtgagcttggacggcgcgccctacctgcgca 685
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||||||||| |||||||||| Sbjct: 25274925 aaggtgagcatggacggcgcgccatacctgcgca 25274892 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 192 gacggagctcaggctcgggctgccggg 218 ||||||||| ||||||||||||||||| Sbjct: 25287473 gacggagctgaggctcgggctgccggg 25287499
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||||||||| |||||||||| Sbjct: 13559 aaggtgagcatggacggcgcgccatacctgcgca 13526 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 192 gacggagctcaggctcgggctgccggg 218 ||||||||| ||||||||||||||||| Sbjct: 26107 gacggagctgaggctcgggctgccggg 26133
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 389 cacctgctcccaaggcacaggctgtgggttggccacc 425 |||||||| |||||||||||| ||||||||||||||| Sbjct: 602 cacctgctaccaaggcacaggttgtgggttggccacc 638
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 398 ccaaggcacaggctgtgggttggccaccagtccgg 432 |||||||||||| ||||||||||||||||||||| Sbjct: 380 ccaaggcacaggtagtgggttggccaccagtccgg 414 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Plus Query: 544 tttgtcaaggtgagcatggacggcgcgccctacctgcgca 583 ||||| |||||||||||||||||||| || ||||| |||| Sbjct: 484 tttgtgaaggtgagcatggacggcgcaccgtaccttcgca 523
>ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 707 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||||||||| |||||| Sbjct: 381 aaggtgagcatggacggcgcgccgtacctg 410
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||||||||| |||||| Sbjct: 5136 aaggtgagcatggacggcgcgccgtacctg 5165
>gb|AY622359.1| Oryza sativa clone RI-150 EST-SRR marker sequence Length = 180 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||| |||||||||||||| ||||||||||||| Sbjct: 96 aaggtcagcatggacggcgcaccctacctgcgca 129
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||||||||| |||||| Sbjct: 136236 aaggtgagcatggacggcgcgccgtacctg 136265 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||| ||||| |||||| Sbjct: 123211 aaggtgagcatggacggggcgccgtacctg 123182
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 544 tttgtcaaggtgagcatggacggcgcgccctacctgcg 581 ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 394 tttgtgaaggtgagcatggacggggcgccgtacctgcg 431
>gb|BT017977.1| Zea mays clone EL01N0525A01.c mRNA sequence Length = 885 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacct 578 |||||||||||||| |||||||||||||| Sbjct: 293 aaggtgagcatggatggcgcgccctacct 321
>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2 gene) Length = 1763 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 389 cacctgctcccaaggcacaggctgtgggttggccacc 425 |||||||||| |||||||| | ||||||||||||||| Sbjct: 804 cacctgctccaaaggcacaagttgtgggttggccacc 840
>gb|AY289601.1| Pinus taeda auxin-induced protein 2 (IAA2) mRNA, complete cds Length = 1774 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 391 cctgctcccaaggcacaggctgtgggttggccacc 425 ||||||||||||||||||| || ||||||||||| Sbjct: 625 cctgctcccaaggcacaggtggtaggttggccacc 659
>emb|AJ315675.1|PPI315675 Pinus pinaster mRNA for putative auxin induced transcription factor Aux/Iaa (iaa88 gene) Length = 1576 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 391 cctgctcccaaggcacaggctgtgggttggccacc 425 ||||||||||||||||||| || ||||||||||| Sbjct: 602 cctgctcccaaggcacaggtggtaggttggccacc 636
>gb|AF083344.2|AF083344 Triticum aestivum heat shock protein 101 kDa (HSP101) mRNA, complete cds Length = 2821 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 220 ggcggcgccgaggcggccaaggccgggaaga 250 ||||||| ||||||||||||||||| ||||| Sbjct: 2738 ggcggcggcgaggcggccaaggccgtgaaga 2768
>dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E22, full insert sequence Length = 1165 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 192 gacggagctcaggctcgggctgccggg 218 ||||||||| ||||||||||||||||| Sbjct: 143 gacggagctgaggctcgggctgccggg 169
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 398 ccaaggcacaggctgtgggttggccaccagt 428 |||||||||| | |||||||||||||||||| Sbjct: 320 ccaaggcacaagttgtgggttggccaccagt 350
>gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, complete sequence Length = 207069 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 271 gacttgaagctgacgctgcccac 293 ||||||||||||||||||||||| Sbjct: 165328 gacttgaagctgacgctgcccac 165306
>gb|AY830453.1| Petromyzon marinus SoxE1 (SoxE1) mRNA, complete cds Length = 2434 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 498 gcagcagcctgctgctaccgctgctgctgg 527 |||||||||||||||| | ||||||||||| Sbjct: 1413 gcagcagcctgctgctgctgctgctgctgg 1384
>ref|XM_640264.1| Dictyostelium discoideum Ras guanine nucleotide exchange factor (DDB0185195), partial mRNA Length = 4671 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 ggtgaagatcaagaaggaggaggaga 490 |||||||| ||||||||||||||||| Sbjct: 701 ggtgaagaacaagaaggaggaggaga 676
>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA, partial cds Length = 1046 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||| | ||||||||||| |||||||||| Sbjct: 219 aaggtgagcttagacggcgcgccatacctgcgca 252
>ref|NM_185060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||| ||||| ||||| |||| Sbjct: 334 aaggtgagcatggacggggcgccatacctccgca 367
>ref|XM_468971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||| ||||| |||||| Sbjct: 523 aaggtgagcatggacggggcgccgtacctg 552
>ref|NM_153786.1| Mus musculus vestigial like 2 homolog (Drosophila) (Vgll2), mRNA Length = 1483 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 208 gggctgccgggaggcggcgccgaggc 233 ||||||||||||| |||||||||||| Sbjct: 822 gggctgccgggagccggcgccgaggc 797
>ref|XM_360862.1| Magnaporthe grisea 70-15 predicted protein (MG03405.4) partial mRNA Length = 675 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctggcgcc 531 |||| ||||||||||||||||||||| Sbjct: 452 ctgccgctaccgctgctgctggcgcc 427
>ref|XM_545380.1| PREDICTED: Canis familiaris similar to Histone H1.2 (H1d) (LOC488258), mRNA Length = 648 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 343 aaggccaagaggccggcagaggccgcggccgctg 376 ||||||||||||||||| || |||||||||||| Sbjct: 67 aaggccaagaggccggccaagtccgcggccgctg 100
>ref|XM_808746.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508569.120) partial mRNA Length = 1581 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctggcgcc 531 |||||||||||||| ||||||||||| Sbjct: 563 ctgctgctaccgctactgctggcgcc 538
>gb|AY160096.1| Dictyostelium discoideum nucleotide exchange factor RasGEF G (gefG) gene, complete cds Length = 7554 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 ggtgaagatcaagaaggaggaggaga 490 |||||||| ||||||||||||||||| Sbjct: 2024 ggtgaagaacaagaaggaggaggaga 1999
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||| ||||| ||||| |||| Sbjct: 47265 aaggtgagcatggacggggcgccatacctccgca 47298
>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193809 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 208 gggctgccgggaggcggcgccgaggc 233 ||||||||||||| |||||||||||| Sbjct: 55838 gggctgccgggagccggcgccgaggc 55863
>tpg|BK003075.1| TPA: TPA_inf: Drosophila melanogaster HDC17998 (HDC17998) gene, complete cds Length = 910 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 gaagatcaagaaggaggaggag 489 |||||||||||||||||||||| Sbjct: 653 gaagatcaagaaggaggaggag 674
>gb|AC108062.3| Homo sapiens BAC clone RP11-420A23 from 4, complete sequence Length = 169597 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 476 agaaggaggaggagaccgagaagcagcagc 505 ||||||||||||||| ||||||||||||| Sbjct: 61470 agaaggaggaggagaaggagaagcagcagc 61441
>gb|AC153625.2| Mus musculus 6 BAC RP23-277O13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 175711 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 476 agaaggaggaggagaccgagaagcagcagc 505 ||||||||||||||| ||||||||||||| Sbjct: 118402 agaaggaggaggagaaggagaagcagcagc 118431
>dbj|AK048390.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130057C21 product:TRANSCRIPTION COFACTOR VESTIGIAL-LIKE 2 PROTEIN homolog [Homo sapiens], full insert sequence Length = 1499 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 208 gggctgccgggaggcggcgccgaggc 233 ||||||||||||| |||||||||||| Sbjct: 978 gggctgccgggagccggcgccgaggc 953
>dbj|AK052987.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930008K19 product:TRANSCRIPTION COFACTOR VESTIGIAL-LIKE 2 PROTEIN homolog [Homo sapiens], full insert sequence Length = 1494 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 208 gggctgccgggaggcggcgccgaggc 233 ||||||||||||| |||||||||||| Sbjct: 978 gggctgccgggagccggcgccgaggc 953
>emb|AJ578054.1|MMU578054 Mus musculus mRNA for VITO1 protein Length = 1484 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 208 gggctgccgggaggcggcgccgaggc 233 ||||||||||||| |||||||||||| Sbjct: 824 gggctgccgggagccggcgccgaggc 799
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 391 cctgctcccaaggcacaggctgtgggttggccaccagt 428 |||||| |||||||||||| || |||||||||||||| Sbjct: 774 cctgctgccaaggcacaggtggttggttggccaccagt 811
>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4, complete sequence Length = 125623 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 465 ggtgaagatcaagaaggaggaggaga 490 |||||||| ||||||||||||||||| Sbjct: 37379 ggtgaagaacaagaaggaggaggaga 37354
>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174367 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 gaagatcaagaaggaggaggag 489 |||||||||||||||||||||| Sbjct: 45901 gaagatcaagaaggaggaggag 45922
>gb|AF542181.1| Mus musculus transcription co-factor vestigial-like 2 protein mRNA, complete cds Length = 1483 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 208 gggctgccgggaggcggcgccgaggc 233 ||||||||||||| |||||||||||| Sbjct: 822 gggctgccgggagccggcgccgaggc 797
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 aaggcacaggctgtgggttggccaccagtc 429 |||||||||| |||||||||||| |||||| Sbjct: 292 aaggcacaggttgtgggttggcctccagtc 321
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctg 579 ||||||||||||||||| ||||| |||||| Sbjct: 525 aaggtgagcatggacggggcgccgtacctg 554
>dbj|AK059619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G11, full insert sequence Length = 1128 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||||||||||| ||||| ||||| |||| Sbjct: 399 aaggtgagcatggacggggcgccatacctccgca 432
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 389 cacctgctcccaaggcacaggctgtgggttggcc 422 |||||| | |||||||||||| |||||||||||| Sbjct: 819 cacctgtttccaaggcacaggttgtgggttggcc 852
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete sequence Length = 299633 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 gaagatcaagaaggaggaggag 489 |||||||||||||||||||||| Sbjct: 40355 gaagatcaagaaggaggaggag 40376
>gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, complete sequence Length = 181505 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 acacagagagagacgaagagaa 61 |||||||||||||||||||||| Sbjct: 102736 acacagagagagacgaagagaa 102757
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 917153 ctgctgctaccgctgctgctg 917133
>ref|XM_511043.1| PREDICTED: Pan troglodytes similar to autoantigen RCD8 (LOC454178), mRNA Length = 5256 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 2696 ctgctgctaccgctgctgctg 2676
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940135D9, complete sequence Length = 93659 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 320 gcaagccggagccggcagccgacaaggcc 348 ||||||||||| |||| |||||||||||| Sbjct: 68471 gcaagccggagtcggccgccgacaaggcc 68443
>ref|XM_463451.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1434 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 cgggaggcggcgccgaggcgg 235 ||||||||||||||||||||| Sbjct: 1313 cgggaggcggcgccgaggcgg 1333
>ref|NM_192002.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 546 tgtcaaggtgagcatggacggcgcgccctacct 578 |||||||||||||||||| || || |||||||| Sbjct: 459 tgtcaaggtgagcatggatggagccccctacct 491
>gb|BC043616.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:50940 IMAGE:6065418), complete cds Length = 4710 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 2004 ctgctgctaccgctgctgctg 1984
>gb|BC064567.1| Homo sapiens autoantigen, mRNA (cDNA clone MGC:70559 IMAGE:5575195), complete cds Length = 4718 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 1998 ctgctgctaccgctgctgctg 1978
>ref|NM_028785.3| Mus musculus dedicator of cytokinesis 8 (Dock8), mRNA Length = 7810 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aagctgacgctgcccaccggc 297 ||||||||||||||||||||| Sbjct: 5200 aagctgacgctgcccaccggc 5180
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 aagaaggaggaggagaccgag 495 ||||||||||||||||||||| Sbjct: 79665 aagaaggaggaggagaccgag 79645
>ref|XM_602828.2| PREDICTED: Bos taurus di-N-acetylchitobiase (LOC524503), mRNA Length = 1134 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcgc 530 |||||||| |||||||||||||||| Sbjct: 73 ctgctgctgccgctgctgctggcgc 97
>gb|AY769476.1| Stylonychia lemnae macronuclear development protein 5 (mdp5) mRNA, partial sequence Length = 569 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 gaagccaagaagagatcagcagctg 83 |||||||||||||||||| |||||| Sbjct: 293 gaagccaagaagagatcatcagctg 317
>ref|NM_014329.3| Homo sapiens autoantigen (RCD-8), mRNA Length = 4739 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 2028 ctgctgctaccgctgctgctg 2008
>gb|AC023286.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-86C14, complete sequence Length = 190251 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 107134 ctgctgctaccgctgctgctg 107154 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 107116 ctgctgctaccgctgctgctg 107136 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 107068 ctgctgctaccgctgctgctg 107088
>ref|XM_757226.1| Ustilago maydis 521 hypothetical protein (UM06172.1) partial mRNA Length = 1347 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 33 ctgctgctaccgctgctgctg 53
>emb|AJ279565.1|HSA279565 Homo sapiens genomic DNA containing CAG repeat, clone D2 Length = 164 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 502 cagcctgctgctaccgctgctgctg 526 |||||||||||| |||||||||||| Sbjct: 49 cagcctgctgctgccgctgctgctg 25
>gb|AC132319.3| Mus musculus BAC clone RP24-258I12 from chromosome 19, complete sequence Length = 193053 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 aagctgacgctgcccaccggc 297 ||||||||||||||||||||| Sbjct: 162761 aagctgacgctgcccaccggc 162781
>gb|AC121570.4| Mus musculus BAC clone RP23-228G6 from 16, complete sequence Length = 184174 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 131903 ctgctgctaccgctgctgctg 131883
>gb|BC053598.1| Homo sapiens autoantigen, mRNA (cDNA clone IMAGE:5741107), partial cds Length = 3950 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 1241 ctgctgctaccgctgctgctg 1221
>ref|XM_793070.1| PREDICTED: Strongylocentrotus purpuratus similar to RAN binding protein 2 (LOC593600), mRNA Length = 543 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 tgaagatcaagaaggaggaggagac 491 ||||||||| ||||||||||||||| Sbjct: 188 tgaagatcatgaaggaggaggagac 212
>ref|XM_782915.1| PREDICTED: Strongylocentrotus purpuratus similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270) (LOC582987), mRNA Length = 582 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 tgaagatcaagaaggaggaggagac 491 ||||||||| ||||||||||||||| Sbjct: 188 tgaagatcatgaaggaggaggagac 212
>ref|XM_782891.1| PREDICTED: Strongylocentrotus purpuratus similar to RAN binding protein 2 (LOC582963), mRNA Length = 606 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 tgaagatcaagaaggaggaggagac 491 ||||||||| ||||||||||||||| Sbjct: 212 tgaagatcatgaaggaggaggagac 236
>ref|XM_779614.1| PREDICTED: Strongylocentrotus purpuratus similar to RAN binding protein 2 (LOC579501), mRNA Length = 564 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 tgaagatcaagaaggaggaggagac 491 ||||||||| ||||||||||||||| Sbjct: 167 tgaagatcatgaaggaggaggagac 191
>ref|XM_790394.1| PREDICTED: Strongylocentrotus purpuratus similar to RAN binding protein 2 (LOC590805), mRNA Length = 953 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 tgaagatcaagaaggaggaggagac 491 ||||||||| ||||||||||||||| Sbjct: 188 tgaagatcatgaaggaggaggagac 212
>emb|BX051861.1|CNS09C6H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC29CC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 548 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 272 ctgctgctaccgctgctgctg 292
>emb|BX020159.1|CNS08NPV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA3CG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 582 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 527 ctgctgctaccgctgctgctg 547
>emb|BX014717.1|CNS08JIP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA22AE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 971 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 532 ctgctgctaccgctgctgctg 552
>gb|AC144487.1| Gasterosteus aculeatus clone CH213-160O9, complete sequence Length = 181162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 tgacttgaagctgacgctgcc 290 ||||||||||||||||||||| Sbjct: 131546 tgacttgaagctgacgctgcc 131526
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 546 tgtcaaggtgagcatggacggcgcgccctacct 578 |||||||||||||||||| || || |||||||| Sbjct: 449 tgtcaaggtgagcatggatggagccccctacct 481
>dbj|AK128582.1| Homo sapiens cDNA FLJ46741 fis, clone TRACH3021373, highly similar to Homo sapiens autoantigen (RCD-8) Length = 5266 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 2575 ctgctgctaccgctgctgctg 2555
>gb|AC023698.4| Drosophila melanogaster X BAC RP98-17C9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160023 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 67651 ctgctgctaccgctgctgctg 67631 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 67663 ctgctgctaccgctgctgct 67644
>gb|AC023728.5| Drosophila melanogaster X BAC RP98-6J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175674 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 4053 ctgctgctaccgctgctgctg 4033 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 4065 ctgctgctaccgctgctgct 4046
>gb|AY113551.1| Drosophila melanogaster RE73396 full insert cDNA Length = 1178 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 240 ctgctgctaccgctgctgctg 220 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 252 ctgctgctaccgctgctgct 233
>ref|NM_132151.1| Drosophila melanogaster CG14427-RA (CG14427), mRNA Length = 1162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 240 ctgctgctaccgctgctgctg 220 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 252 ctgctgctaccgctgctgct 233
>dbj|AK163128.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730017H24 product:hypothetical Serine-rich region profile containing protein, full insert sequence Length = 1608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 199 ctgctgctaccgctgctgctg 219
>dbj|AK028968.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732475D14 product:similar to CDNA FLJ30931 FIS, CLONE FEBRA2006873, WEAKLY SIMILAR TO TRG PROTEIN [Homo sapiens], full insert sequence Length = 2869 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aagctgacgctgcccaccggc 297 ||||||||||||||||||||| Sbjct: 258 aagctgacgctgcccaccggc 238
>dbj|AK028518.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632417D23 product:hypothetical Serine-rich region profile containing protein, full insert sequence Length = 3293 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 199 ctgctgctaccgctgctgctg 219
>ref|NG_001122.1| Homo sapiens fucosidase, alpha-L- 1, tissue pseudogene (FUCA1P) on chromosome 2 Length = 3290 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcgc 530 |||||||||| |||||||||||||| Sbjct: 760 ctgctgctactgctgctgctggcgc 784
>dbj|AK004816.2| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200017A24 product:similar to CDNA FLJ30931 FIS, CLONE FEBRA2006873, WEAKLY SIMILAR TO TRG PROTEIN [Homo sapiens], full insert sequence Length = 2694 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aagctgacgctgcccaccggc 297 ||||||||||||||||||||| Sbjct: 338 aagctgacgctgcccaccggc 318
>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone BACR02E09, complete sequence Length = 175118 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 100380 ctgctgctaccgctgctgctg 100400
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 547 gtcaaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||| | ||||||||||||| |||||||||| Sbjct: 23118780 gtcaaggtggccgtggacggcgcgccgtacctgcgca 23118816
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 aagaaggaggaggagaccgag 495 ||||||||||||||||||||| Sbjct: 17819711 aagaaggaggaggagaccgag 17819691
>gb|AF333960.1|AF333960 Mus musculus AF9 mRNA, partial cds Length = 1699 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 452 ctgctgctaccgctgctgctg 432
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 cgggaggcggcgccgaggcgg 235 ||||||||||||||||||||| Sbjct: 32937080 cgggaggcggcgccgaggcgg 32937100 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 546 tgtcaaggtgagcatggacggcgcgccctacct 578 |||||||||||||||||| || || |||||||| Sbjct: 27771323 tgtcaaggtgagcatggatggagccccctacct 27771355 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 560 tggacggcgcgccctacctgcgca 583 ||||||||||||| |||||||||| Sbjct: 4074923 tggacggcgcgccgtacctgcgca 4074900
>gb|AC040162.5| Homo sapiens chromosome 16 clone CTC-479C5, complete sequence Length = 217470 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 135987 ctgctgctaccgctgctgctg 136007
>gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complete sequence Length = 155011 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctggcgc 530 |||||||||| |||||||||||||| Sbjct: 127103 ctgctgctactgctgctgctggcgc 127079
>gb|AC125421.9| Homo sapiens chromosome 17, clone CTD-2532D12, complete sequence Length = 111128 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 39218 ctgctgctaccgctgctgctg 39238
>gb|BC030316.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone IMAGE:5371956), complete cds Length = 3684 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aagctgacgctgcccaccggc 297 ||||||||||||||||||||| Sbjct: 2191 aagctgacgctgcccaccggc 2171
>gb|AC166562.2| Spironucleus vortens clone JGIBAWF-9F12, complete sequence Length = 41261 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 510 tgctaccgctgctgctggcgc 530 ||||||||||||||||||||| Sbjct: 37175 tgctaccgctgctgctggcgc 37195
>gb|AC167670.1| Mus musculus BAC clone RP24-119K18 from chromosome 16, complete sequence Length = 200044 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 474 caagaaggaggaggagaccgagaag 498 |||||||||||||||||| |||||| Sbjct: 87915 caagaaggaggaggagacagagaag 87891
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 546 tgtcaaggtgagcatggacggcgcgccctacct 578 |||||||||||||||||| || || |||||||| Sbjct: 63378 tgtcaaggtgagcatggatggagccccctacct 63410
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 cgggaggcggcgccgaggcgg 235 ||||||||||||||||||||| Sbjct: 3308 cgggaggcggcgccgaggcgg 3328
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 547 gtcaaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||| | ||||||||||||| |||||||||| Sbjct: 69428 gtcaaggtggccgtggacggcgcgccgtacctgcgca 69464
>gb|BC043470.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone IMAGE:5150248), partial cds Length = 3366 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aagctgacgctgcccaccggc 297 ||||||||||||||||||||| Sbjct: 1003 aagctgacgctgcccaccggc 983
>gb|BC055295.1| Mus musculus dedicator of cytokinesis 8, mRNA (cDNA clone IMAGE:4485826), partial cds Length = 3157 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aagctgacgctgcccaccggc 297 ||||||||||||||||||||| Sbjct: 1031 aagctgacgctgcccaccggc 1011
>dbj|AK131180.1| Mus musculus mRNA for mFLJ00346 protein Length = 3778 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 aagctgacgctgcccaccggc 297 ||||||||||||||||||||| Sbjct: 2163 aagctgacgctgcccaccggc 2143
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 546 tgtcaaggtgagcatggacggcgcgccctacct 578 |||||||||||||||||| || || |||||||| Sbjct: 546 tgtcaaggtgagcatggatggagccccctacct 578
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 546 tgtcaaggtgagcatggacggcgcgccctacct 578 |||||||||||||||||| || || |||||||| Sbjct: 461 tgtcaaggtgagcatggatggagccccctacct 493
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 547 gtcaaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||| | ||||||||||||| |||||||||| Sbjct: 376 gtcaaggtggccgtggacggcgcgccgtacctgcgca 412
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 546 tgtcaaggtgagcatggacggcgcgccctacct 578 |||||||||||||||||| || || |||||||| Sbjct: 472 tgtcaaggtgagcatggatggagccccctacct 504
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 547 gtcaaggtgagcatggacggcgcgccctacctgcgca 583 ||||||||| | ||||||||||||| |||||||||| Sbjct: 375 gtcaaggtggccgtggacggcgcgccgtacctgcgca 411
>gb|AY108311.1| Zea mays PCO113729 mRNA sequence Length = 1202 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 550 aaggtgagcatggacggcgcgccctacct 578 ||||||||||||||||| ||||| ||||| Sbjct: 442 aaggtgagcatggacggggcgccatacct 470
>gb|AY107725.1| Zea mays PCO106440 mRNA sequence Length = 1176 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 547 gtcaaggtgagcatggacggcgcgccctacctg 579 ||||| ||||||||||||||||| || |||||| Sbjct: 533 gtcaaagtgagcatggacggcgccccgtacctg 565
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 277978 ctgctgctaccgctgctgctg 277998
>gb|AE003439.3| Drosophila melanogaster chromosome X, section 23 of 74 of the complete sequence Length = 331952 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 201313 ctgctgctaccgctgctgctg 201293 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 201325 ctgctgctaccgctgctgct 201306
>dbj|AP006680.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375a, complete sequence Length = 58157 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 ctttgtcaaggtgagcatgga 563 ||||||||||||||||||||| Sbjct: 773 ctttgtcaaggtgagcatgga 753
>ref|NM_172934.1| Mus musculus RIKEN cDNA 4632417D23 gene (4632417D23Rik), mRNA Length = 3293 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 199 ctgctgctaccgctgctgctg 219
>gb|M80816.1|HUMPFUCAS H.sapiens fucosidase pseudogene Length = 3290 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcgc 530 |||||||||| |||||||||||||| Sbjct: 760 ctgctgctactgctgctgctggcgc 784
>gb|M95770.1|BOVCHITO01 Bos taurus di-N-acetylchitobiase gene, exon 1 Length = 847 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcgc 530 |||||||| |||||||||||||||| Sbjct: 733 ctgctgctgccgctgctgctggcgc 757
>dbj|AB055981.1| Lampetra japonica mRNA for serum lectin, complete cds Length = 1810 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 66 ctgctgctaccgctgctgctg 86
>gb|L26339.1|HUMAUTANT Human autoantigen mRNA, complete cds Length = 4659 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctg 526 ||||||||||||||||||||| Sbjct: 1998 ctgctgctaccgctgctgctg 1978
>gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome 14, complete sequence Length = 223142 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 aagaaggaggaggagaccgagaag 498 ||||||||||||||||| |||||| Sbjct: 2889 aagaaggaggaggagacagagaag 2912
>gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome 8, complete sequence Length = 205525 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 catacacagagagagacgaagaga 60 |||||||||||||||| ||||||| Sbjct: 183149 catacacagagagagaggaagaga 183172
>gb|AY728028.1| Cenibacterium arsenoxidans clone M36 FliG (fliG), FliH (fliH), FliI (fliI), FliJ (fliJ), FliK (fliK), FliL (fliL), FliM (fliM), FliN (fliN), FliO (fliO), and FliP (fliP) genes, complete cds Length = 8550 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cctgctgctaccgctgctgc 524 |||||||||||||||||||| Sbjct: 6978 cctgctgctaccgctgctgc 6997
>ref|XM_550382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 tggacggcgcgccctacctgcgca 583 ||||||||||||| |||||||||| Sbjct: 420 tggacggcgcgccgtacctgcgca 443
>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence Length = 186860 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 aagaaggaggaggagaccgagaag 498 ||||||||||||||||| |||||| Sbjct: 95587 aagaaggaggaggagacagagaag 95610
>ref|XM_466171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gggaggcggcgccgaggcgg 235 |||||||||||||||||||| Sbjct: 337 gggaggcggcgccgaggcgg 318
>ref|NM_001030582.1| Gallus gallus DEAH (Asp-Glu-Ala-His) box polypeptide 38 (DHX38), mRNA Length = 4145 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gatcaagaaggaggaggaga 490 |||||||||||||||||||| Sbjct: 1712 gatcaagaaggaggaggaga 1731
>ref|XM_450686.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 ggaggcggcgccgaggcggc 236 |||||||||||||||||||| Sbjct: 141 ggaggcggcgccgaggcggc 122
>ref|NM_002508.1| Homo sapiens nidogen 1 (NID1), mRNA Length = 4898 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcg 529 |||||||| ||||||||||||||| Sbjct: 136 ctgctgctgccgctgctgctggcg 159
>gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, complete sequence Length = 188514 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 gctatgaggacaccattgacttga 277 |||||||||||||||||| ||||| Sbjct: 167734 gctatgaggacaccattgccttga 167711
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cctgctgctaccgctgctgc 524 |||||||||||||||||||| Sbjct: 649358 cctgctgctaccgctgctgc 649377
>gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, complete sequence Length = 221083 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 aggcacaggctgtgggttgg 420 |||||||||||||||||||| Sbjct: 137298 aggcacaggctgtgggttgg 137317
>gb|AC158939.9| Mus musculus chromosome 5, clone RP23-204A8, complete sequence Length = 218847 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 aagaaggaggaggagaccgagaag 498 ||||||||||||||||| |||||| Sbjct: 118817 aagaaggaggaggagacggagaag 118840
>gb|AC008328.6| Drosophila melanogaster clone BACR09A04, complete sequence Length = 166722 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 140232 ctgctgctaccgctgctgct 140213
>ref|XM_363827.1| Magnaporthe grisea 70-15 hypothetical protein (MG01753.4) partial mRNA Length = 1761 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 611 ctgctgctaccgctgctgct 630
>ref|XM_461750.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G05346g) partial mRNA Length = 984 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 aagatcaagaaggaggagga 488 |||||||||||||||||||| Sbjct: 284 aagatcaagaaggaggagga 303
>ref|XM_959018.1| Neurospora crassa OR74A hypothetical protein (NCU01927.1) partial mRNA Length = 1821 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ctaccgctgctgctggcgccaacg 535 |||| ||||||||||||||||||| Sbjct: 1250 ctactgctgctgctggcgccaacg 1227
>ref|XM_329116.1| Neurospora crassa OR74A hypothetical protein (NCU01927.1) partial mRNA Length = 1821 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ctaccgctgctgctggcgccaacg 535 |||| ||||||||||||||||||| Sbjct: 1250 ctactgctgctgctggcgccaacg 1227
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccggcagaggccgcggccgc 374 |||||||||||||||||||| Sbjct: 1910963 ccggcagaggccgcggccgc 1910944
>ref|XM_570261.1| Cryptococcus neoformans var. neoformans JEC21 elongation factor 3 (CND02420) partial mRNA Length = 3640 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cctgctgctaccgctgctgc 524 |||||||||||||||||||| Sbjct: 208 cctgctgctaccgctgctgc 227
>ref|XM_445629.1| Candida glabrata CBS138, CAGL0D05016g partial mRNA Length = 687 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 aagatcaagaaggaggaggagacc 492 |||| ||||||||||||||||||| Sbjct: 19 aagaccaagaaggaggaggagacc 42
>gb|AC125381.4| Mus musculus BAC clone RP23-250N10 from chromosome 19, complete sequence Length = 155214 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cttgcatacacagagagaga 52 |||||||||||||||||||| Sbjct: 150358 cttgcatacacagagagaga 150377
>gb|AC126768.2| Homo sapiens chromosome 5 clone RP11-259O2, complete sequence Length = 131663 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gaagccaagaagagatcagc 78 |||||||||||||||||||| Sbjct: 131575 gaagccaagaagagatcagc 131594
>gb|AC129206.3| Mus musculus BAC clone RP24-269P22 from chromosome 8, complete sequence Length = 181214 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 catacacagagagagacgaagaga 60 |||||||||||||||| ||||||| Sbjct: 180440 catacacagagagagaggaagaga 180417
>ref|XM_547944.2| PREDICTED: Canis familiaris similar to potassium channel, subfamily K, member 10 (LOC490822), mRNA Length = 1668 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 aagaaggaggaggagaccgagaag 498 ||||||||||||||||| |||||| Sbjct: 1504 aagaaggaggaggagacggagaag 1527
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene) Length = 1778 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 acggagctcaggctcgggct 212 |||||||||||||||||||| Sbjct: 480 acggagctcaggctcgggct 499
>emb|BX957365.5| Zebrafish DNA sequence from clone CH211-167F3 in linkage group 23, complete sequence Length = 18148 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 aagaaggaggaggagaccgagaag 498 |||| ||||||||||||||||||| Sbjct: 3898 aagagggaggaggagaccgagaag 3875
>emb|AL592164.6| Human DNA sequence from clone RP13-126P21 on chromosome X Contains a ribosomal protein S11 (RPS11) pseudogene and a CpG island, complete sequence Length = 124687 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tgctgctaccgctgctgctg 526 |||||||||||||||||||| Sbjct: 35454 tgctgctaccgctgctgctg 35473
>emb|AL590116.8| Human DNA sequence from clone RP13-91J12 on chromosome X, complete sequence Length = 120044 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gaagagaagccaagaagaga 73 |||||||||||||||||||| Sbjct: 92825 gaagagaagccaagaagaga 92806
>emb|AL161627.13| Human DNA sequence from clone RP11-287A8 on chromosome 9 Contains the 3' end of the gene for CDw92 antigen (CDW92) (CTL1), a novel gene, the CSDUFD1 gene for cystatin and DUF19 domain containing 1, the 5' end of a novel gene, part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins and a CpG island, complete sequence Length = 138752 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 catacacagagagagacgaagaga 60 ||||||||||||||||| |||||| Sbjct: 29560 catacacagagagagaccaagaga 29537
>emb|AL122018.37|HSDJ764D2 Human DNA sequence from clone RP4-764D2 on chromosome 1q42.2-43 Contains the 5' end of the NID gene for nidogen (enactin) protein, an aconitase 2, mitochondrial (ACO2) pseudogene, the 5' end of the TM7SF1 gene for transmembrane 7 superfamily member 1 (upregulated in kidney) and two CpG islands, complete sequence Length = 128811 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctggcg 529 |||||||| ||||||||||||||| Sbjct: 37693 ctgctgctgccgctgctgctggcg 37670
>emb|AL035531.17|HS483L3 Human DNA sequence from clone RP3-483L3 on chromosome 6p25.1-25.3, complete sequence Length = 74513 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gctgctaccgctgctgctgg 527 |||||||||||||||||||| Sbjct: 36801 gctgctaccgctgctgctgg 36782
>gb|AF533976.1| Oreochromis niloticus unknown sequence Length = 99935 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 gctgctaccgctgctgctggcgcc 531 ||||||||||||||||||| |||| Sbjct: 80500 gctgctaccgctgctgctgtcgcc 80477
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 aagatcaagaaggaggagga 488 |||||||||||||||||||| Sbjct: 412033 aagatcaagaaggaggagga 412014
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 aagatcaagaaggaggaggagacc 492 |||| ||||||||||||||||||| Sbjct: 484639 aagaccaagaaggaggaggagacc 484662
>emb|BX897676.1| Neurospora crassa DNA linkage group VI BAC clone B8I24 Length = 83591 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 56802 ctgctgctaccgctgctgct 56821
>gb|BC045606.1| Homo sapiens nidogen 1, mRNA (cDNA clone MGC:33141 IMAGE:5271590), complete cds Length = 5406 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcg 529 |||||||| ||||||||||||||| Sbjct: 58 ctgctgctgccgctgctgctggcg 81
>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5 Length = 349082 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 cggtgaagatcaagaaggaggagg 487 ||||||||||||||||| |||||| Sbjct: 316563 cggtgaagatcaagaagaaggagg 316540
>gb|AC108863.4| Homo sapiens chromosome 8, clone CTD-2544N14, complete sequence Length = 199218 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cccaccaccaccatctccta 20 |||||||||||||||||||| Sbjct: 61927 cccaccaccaccatctccta 61908
>emb|AJ719786.1| Gallus gallus mRNA for hypothetical protein, clone 6i5 Length = 4145 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gatcaagaaggaggaggaga 490 |||||||||||||||||||| Sbjct: 1712 gatcaagaaggaggaggaga 1731
>emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in linkage group 13, complete sequence Length = 89710 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cacagagagagacgaagaga 60 |||||||||||||||||||| Sbjct: 85256 cacagagagagacgaagaga 85275
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ggcaagccggagccggcagc 338 |||||||||||||||||||| Sbjct: 2516092 ggcaagccggagccggcagc 2516073
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cggcgccgaggcggccaagg 241 |||||||||||||||||||| Sbjct: 4634698 cggcgccgaggcggccaagg 4634679
>dbj|AK091903.1| Homo sapiens cDNA FLJ34584 fis, clone KIDNE2008697 Length = 2121 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgctggcg 529 |||||||| ||||||||||||||| Sbjct: 676 ctgctgctgccgctgctgctggcg 653
>tpg|BK002809.1| TPA: TPA_inf: Drosophila melanogaster HDC15403 (HDC15403) gene, complete cds Length = 1350 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tgctgctaccgctgctgctg 526 |||||||||||||||||||| Sbjct: 632 tgctgctaccgctgctgctg 651
>gb|AE011797.1| Xanthomonas axonopodis pv. citri str. 306, section 175 of 469 of the complete genome Length = 10238 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccggcagaggccgcggccgc 374 |||||||||||||||||||| Sbjct: 7646 ccggcagaggccgcggccgc 7627
>gb|AF097363.1| Triticum aestivum heat shock protein 101 (Hsp101b) mRNA, complete cds Length = 3107 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 223 ggcgccgaggcggccaaggccgggaaga 250 |||| ||||||||||||||||| ||||| Sbjct: 2788 ggcggcgaggcggccaaggccgtgaaga 2815
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 ccaaggcacaggctgtgggttggccacc 425 |||||||||| | ||||||||||||||| Sbjct: 407 ccaaggcacaagttgtgggttggccacc 434
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gcgccgaggcggccaaggcc 243 |||||||||||||||||||| Sbjct: 4391626 gcgccgaggcggccaaggcc 4391607
>ref|NM_057457.3| Drosophila melanogaster microtubule star CG7109-RA (mts), mRNA Length = 2178 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 1941 ctgctgctaccgctgctgct 1922
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 acgctgcccaccggcggcat 302 |||||||||||||||||||| Sbjct: 1668425 acgctgcccaccggcggcat 1668444
>gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosome 10, complete sequence Length = 212761 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ccaccaccaccatctcctaa 21 |||||||||||||||||||| Sbjct: 163462 ccaccaccaccatctcctaa 163443
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcaagccggagccggcagcc 339 |||||||||||||||||||| Sbjct: 342622 gcaagccggagccggcagcc 342641
>gb|BC012501.1| Homo sapiens nidogen 1, mRNA (cDNA clone IMAGE:4513545), with apparent retained intron Length = 1994 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcg 529 |||||||| ||||||||||||||| Sbjct: 479 ctgctgctgccgctgctgctggcg 502
>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone BACR36D15, complete sequence Length = 159513 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 22671 ctgctgctaccgctgctgct 22652
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgccgaggcggccaaggccg 244 |||||||||||||||||||| Sbjct: 1496954 cgccgaggcggccaaggccg 1496935
>gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, region 28C-28D, BAC clone BACR31D05, complete sequence Length = 172633 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 40989 ctgctgctaccgctgctgct 40970
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggaggcggcgccgaggcggc 236 |||||||||||||||||||| Sbjct: 12241065 ggaggcggcgccgaggcggc 12241084
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ctgctaccgctgctgctggc 528 |||||||||||||||||||| Sbjct: 23670674 ctgctaccgctgctgctggc 23670655
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggaggcggcgccgaggcggc 236 |||||||||||||||||||| Sbjct: 26248489 ggaggcggcgccgaggcggc 26248508
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gggaggcggcgccgaggcgg 235 |||||||||||||||||||| Sbjct: 20843630 gggaggcggcgccgaggcgg 20843649
>gb|AF316889.1|AF316889 Filobasidiella neoformans var. neoformans elongation factor 3 mRNA, complete cds Length = 3456 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 cctgctgctaccgctgctgc 524 |||||||||||||||||||| Sbjct: 180 cctgctgctaccgctgctgc 199
>gb|AC008237.4|AC008237 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR47D16, complete sequence Length = 200216 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tgctgctaccgctgctgctg 526 |||||||||||||||||||| Sbjct: 40500 tgctgctaccgctgctgctg 40519
>gb|AC008366.3|AC008366 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR13M04, complete sequence Length = 172282 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tgctgctaccgctgctgctg 526 |||||||||||||||||||| Sbjct: 131390 tgctgctaccgctgctgctg 131409
>gb|AY820159.1| Arvicanthis niloticus prokineticin 2 variant 1S/2/3/4 (Prok2) mRNA, Prok2-S allele, complete cds, alternatively spliced Length = 431 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 37 ctgctgctaccgctgctgct 56
>gb|AY820158.1| Arvicanthis niloticus prokineticin 2 variant 1A/2/3/4 (Prok2) mRNA, Prok2-A allele, complete cds, alternatively spliced Length = 431 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 37 ctgctgctaccgctgctgct 56
>gb|AY820157.1| Arvicanthis niloticus prokineticin 2 variant 1S/2L/4 (Prok2) mRNA, Prok2-S allele, complete cds, alternatively spliced Length = 473 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 37 ctgctgctaccgctgctgct 56
>gb|AY820156.1| Arvicanthis niloticus prokineticin 2 variant 1A/2L/4 (Prok2) mRNA, Prok2-A allele, complete cds, alternatively spliced Length = 473 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 37 ctgctgctaccgctgctgct 56
>gb|AY820155.1| Arvicanthis niloticus prokineticin 2 variant 1S/2/4 (Prok2) mRNA, Prok2-S allele, complete cds, alternatively spliced Length = 368 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 37 ctgctgctaccgctgctgct 56
>gb|AY820154.1| Arvicanthis niloticus prokineticin 2 variant 1A/2/4 (Prok2) mRNA, Prok2-A allele, complete cds, alternatively spliced Length = 368 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 37 ctgctgctaccgctgctgct 56
>gb|AY820153.1| Arvicanthis niloticus prokineticin 2 variant S (Prok2) gene, Prok2-S allele, promoter region, exon 1 and partial cds Length = 447 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 315 ctgctgctaccgctgctgct 334
>gb|AY820152.1| Arvicanthis niloticus prokineticin 2 variant A (Prok2) gene, Prok2-A allele, promoter region, exon 1 and partial cds Length = 447 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 315 ctgctgctaccgctgctgct 334
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence Length = 198374 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 atacacagagagagacgaagagaagcca 65 ||||||||||||||| ||||| |||||| Sbjct: 130817 atacacagagagagaagaagacaagcca 130844
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 560 tggacggcgcgccctacctgcgca 583 ||||||||||||| |||||||||| Sbjct: 41666 tggacggcgcgccgtacctgcgca 41643
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 ccaaggcacaggctgtgggttggccacc 425 |||||||||||| ||| ||||||||||| Sbjct: 361 ccaaggcacaggttgttggttggccacc 388
>gb|AY190934.1| Drosophila erecta clone DERF01_13_G01 (D1408) genomic sequence Length = 38418 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 cctgctgctaccgctgctgctggc 528 ||||||||| |||||||||||||| Sbjct: 15147 cctgctgctcccgctgctgctggc 15124
>gb|AC124852.2| Homo sapiens chromosome 5 clone RP11-1013K16, complete sequence Length = 189358 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gaagccaagaagagatcagc 78 |||||||||||||||||||| Sbjct: 77062 gaagccaagaagagatcagc 77081
>gb|AC127287.4| Mus musculus BAC clone RP23-345G7 from chromosome 7, complete sequence Length = 209901 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcgccaa 533 |||||||| | ||||||||||||||||| Sbjct: 55095 ctgctgctcctgctgctgctggcgccaa 55122
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ctgctaccgctgctgctggc 528 |||||||||||||||||||| Sbjct: 78270 ctgctaccgctgctgctggc 78251
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggaggcggcgccgaggcggc 236 |||||||||||||||||||| Sbjct: 23117 ggaggcggcgccgaggcggc 23136
>gb|AY350626.1| Lobelia flexuosa internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 643 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ccgggaggcggcgccgaggc 233 |||||||||||||||||||| Sbjct: 200 ccgggaggcggcgccgaggc 181
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 560 tggacggcgcgccctacctgcgca 583 ||||||||||||| |||||||||| Sbjct: 21894 tggacggcgcgccgtacctgcgca 21871
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggaggcggcgccgaggcggc 236 |||||||||||||||||||| Sbjct: 24619 ggaggcggcgccgaggcggc 24638
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gggaggcggcgccgaggcgg 235 |||||||||||||||||||| Sbjct: 86091 gggaggcggcgccgaggcgg 86110
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 tggacggcgcgccctacctgcgca 583 ||||||||||||| |||||||||| Sbjct: 420 tggacggcgcgccgtacctgcgca 443
>gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O3 (LANL), complete sequence Length = 164538 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 atcacaaggcatcttgcata 40 |||||||||||||||||||| Sbjct: 108175 atcacaaggcatcttgcata 108194
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 ccaaggcacaggctgtgggttggccacc 425 |||||||||||| ||| ||||||||||| Sbjct: 775 ccaaggcacaggttgttggttggccacc 802
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 tggacggcgcgccctacctgcgca 583 ||||||||||||| |||||||||| Sbjct: 422 tggacggcgcgccgtacctgcgca 445
>ref|NM_210851.1| Eremothecium gossypii AFL051Wp (AFL051W), mRNA Length = 1608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcaagccggagccggcagcc 339 |||||||||||||||||||| Sbjct: 54 gcaagccggagccggcagcc 73
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 tggacggcgcgccctacctgcgca 583 ||||||||||||| |||||||||| Sbjct: 412 tggacggcgcgccgtacctgcgca 435
>dbj|AK064804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D13, full insert sequence Length = 1176 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 ggaggcggcgccgaggcggc 236 |||||||||||||||||||| Sbjct: 141 ggaggcggcgccgaggcggc 122
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 tggacggcgcgccctacctgcgca 583 ||||||||||||| |||||||||| Sbjct: 420 tggacggcgcgccgtacctgcgca 443
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggaggcggcgccgaggcggc 236 |||||||||||||||||||| Sbjct: 140347 ggaggcggcgccgaggcggc 140366
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 gacggcgcgccctacctgcg 581 |||||||||||||||||||| Sbjct: 426 gacggcgcgccctacctgcg 445
>gb|AE003748.3| Drosophila melanogaster chromosome 3R, section 86 of 118 of the complete sequence Length = 253272 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tgctgctaccgctgctgctg 526 |||||||||||||||||||| Sbjct: 51195 tgctgctaccgctgctgctg 51214
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete sequence Length = 289516 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 11379 ctgctgctaccgctgctgct 11360
>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete sequence Length = 341520 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 322029 ctgctgctaccgctgctgct 322010
>emb|X82245.1|HSNIDEXON H.sapiens nidogen gene (exon 1) Length = 5355 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcg 529 |||||||| ||||||||||||||| Sbjct: 2479 ctgctgctgccgctgctgctggcg 2502
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cggcgccgaggcggccaagg 241 |||||||||||||||||||| Sbjct: 4638645 cggcgccgaggcggccaagg 4638626
>gb|AC004723.1|AC004723 Drosophila melanogaster, chromosome 2L, region 28C4-28D2, P1 clone DS00289, complete sequence Length = 52277 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 6891 ctgctgctaccgctgctgct 6872
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 cggcgccgaggcggccaagg 241 |||||||||||||||||||| Sbjct: 2209949 cggcgccgaggcggccaagg 2209930
>gb|AC093316.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202i7, complete sequence Length = 226567 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 atacacagagagagacgaagagaa 61 |||||||||||||||| ||||||| Sbjct: 63292 atacacagagagagacaaagagaa 63269
>gb|U17474.1|HSU17474 Human autoantigen mRNA, complete cds Length = 3332 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 tgctgctaccgctgctgctg 526 |||||||||||||||||||| Sbjct: 637 tgctgctaccgctgctgctg 618
>dbj|AB209448.1| Homo sapiens mRNA for nidogen (enactin) variant protein Length = 4659 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcg 529 |||||||| ||||||||||||||| Sbjct: 45 ctgctgctgccgctgctgctggcg 68
>gb|DQ277648.1| Equus caballus dopamine receptor D4 (DRD4) gene, exons 1 through 4 and partial cds Length = 2871 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggaggcggcgccgaggcggc 236 |||||||||||||||||||| Sbjct: 2697 ggaggcggcgccgaggcggc 2716
>gb|M30269.1|HUMNID Human nidogen mRNA, complete cds Length = 4898 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 ctgctgctaccgctgctgctggcg 529 |||||||| ||||||||||||||| Sbjct: 136 ctgctgctgccgctgctgctggcg 159
>gb|U01210.1|AMERAMY Anopheles merus alpha-amylase (amy) gene, complete cds Length = 2927 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ctgctgctaccgctgctgct 525 |||||||||||||||||||| Sbjct: 147 ctgctgctaccgctgctgct 128 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,113,030 Number of Sequences: 3902068 Number of extensions: 6113030 Number of successful extensions: 182082 Number of sequences better than 10.0: 249 Number of HSP's better than 10.0 without gapping: 253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 179501 Number of HSP's gapped (non-prelim): 2564 length of query: 583 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 560 effective length of database: 17,143,297,704 effective search space: 9600246714240 effective search space used: 9600246714240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
