ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart24d02 |
|---|---|
| Clone Library Name | barley_pub |
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 59.7 bits (143), Expect = 5e-09 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 5/135 (3%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHMLSV 301 V+V+PFP QGH+ P+++ +++LA GV V T F I A+ A P + +S Sbjct: 5 VLVVPFPGQGHMNPMVQFAKRLASKGVATTLVTTRF-----IQRTADVDAHPAMVEAISD 59 Query: 302 PDGLGPGDDHADIGKFVKDLPAAMSGRLEEMIRSR-----KINWVIVDVSMSWALELATT 466 G A + ++++ AA S L ++ +R V+ D W L +A Sbjct: 60 GHDEGGFASAAGVAEYLEKQAAAASASLASLVEARASSADAFTCVVYDSYEDWVLPVARR 119 Query: 467 AGARVASFSTYSAAV 511 G FST S AV Sbjct: 120 MGLPAVPFSTQSCAV 134
>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin| O-glucosyltransferase 2) Length = 489 Score = 50.8 bits (120), Expect = 2e-06 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 12/154 (7%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTEFNHDLVI---GSMAEKGAIPQGIHM 292 V+ +P+PAQGH+ P+M +++ L G V FV+T +NH+ + GS A G Sbjct: 14 VVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGL--PSFRF 71 Query: 293 LSVPDGLGPGDDHA--DIGKFVKDLPAAMSGRLEEMIRS-------RKINWVIVDVSMSW 445 S+ DGL D A DI + E+++ ++ ++ D MS+ Sbjct: 72 ESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSF 131 Query: 446 ALELATTAGARVASFSTYSAAVFSLRMNLPRLIE 547 L++A G F T S F ++ IE Sbjct: 132 TLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIE 165
>UFOG_PETHY (Q43716) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) Length = 473 Score = 47.4 bits (111), Expect = 3e-05 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 10/138 (7%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHMLSV 301 V++ PF A GH+ P ++L+ KL+ +GV+V F N V + A I L++ Sbjct: 14 VVMFPFFAFGHISPFVQLANKLSSYGVKVSFFTASGNASRVKSML--NSAPTTHIVPLTL 71 Query: 302 P--DGLGPGDD--------HADIGKFVKDLPAAMSGRLEEMIRSRKINWVIVDVSMSWAL 451 P +GL PG + A++ K DL M +++ ++ K ++V+ D + W Sbjct: 72 PHVEGLPPGAESTAELTPASAELLKVALDL---MQPQIKTLLSHLKPHFVLFDFAQEWLP 128 Query: 452 ELATTAGARVASFSTYSA 505 ++A G + +S A Sbjct: 129 KMANGLGIKTVYYSVVVA 146
>FOGT1_ARATH (Q9ZQ95) Flavonol-3-O-glycoside-7-O-glucosyltransferase 1 (EC| 2.4.1.-) Length = 495 Score = 42.0 bits (97), Expect = 0.001 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 16/128 (12%) Frame = +2 Query: 125 MVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTEFN---HDLVIGSMAEKGAIPQGIHML 295 ++ PF AQGH+IP+++++R LA GV + V T N V+ E G +P + + Sbjct: 15 VLFPFMAQGHMIPMVDIARLLAQRGVLITIVTTPHNAARFKNVLNRAIESG-LPINLVQV 73 Query: 296 SVP---DGLGPGDDHADI----------GKFVKDLPAAMSGRLEEMIRSRKINWVIVDVS 436 P GL G ++ D+ K V L + +EEM S + + +I D+ Sbjct: 74 KFPYQEAGLQEGQENMDLLTTMEQITSFFKAVNLLKEPVQNLIEEM--SPRPSCLISDMC 131 Query: 437 MSWALELA 460 +S+ E+A Sbjct: 132 LSYTSEIA 139
>UFOG_HORVU (P14726) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) Length = 455 Score = 38.1 bits (87), Expect = 0.016 Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 13/145 (8%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGH---GVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHM 292 + V+ FP H L +R LA G + F+ T N + + GA+P + Sbjct: 8 IAVVAFPFSSHAAVLFSFARALAAAAPAGTSLSFLTTADN----AAQLRKAGALPGNLRF 63 Query: 293 LSVPDGLGPGDDHADIGKFVKDL--PAAMSGRLEEMIRS-------RKINWVIVDVSMSW 445 + VPDG+ PG+ DL AA +G + + + +++ V+ D + W Sbjct: 64 VEVPDGVPPGETSCLSPPRRMDLFMAAAEAGGVRVGLEAACASAGGARVSCVVGD-AFVW 122 Query: 446 ALELATTAGAR-VASFSTYSAAVFS 517 + A+ AGA VA ++ S A+ + Sbjct: 123 TADAASAAGAPWVAVWTAASCALLA 147
>ZOX_PHAVU (P56725) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin| O-beta-D-xylosyltransferase) Length = 454 Score = 38.1 bits (87), Expect = 0.016 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDT 223 V++LPFP QGH+ P ++LS +A + V +V T Sbjct: 11 VLLLPFPVQGHLNPFLQLSHLIAAQNIAVHYVGT 44
>COGT3_ARATH (Q9ZQ94) Cytokinin-O-glucosyltransferase 3 (EC 2.4.1.-)| (UDP-glycosyltransferase 73C5) (Deoxynivalenol-glucosyl-transferase) (Zeatin O-glucosyltransferase 3) (AtZOG3) Length = 495 Score = 37.7 bits (86), Expect = 0.022 Identities = 16/36 (44%), Positives = 25/36 (69%) Frame = +2 Query: 125 MVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTEFN 232 ++ PF AQGH+IP+++++R LA GV + V T N Sbjct: 14 VLFPFMAQGHMIPMVDIARLLAQRGVIITIVTTPHN 49
>COGT1_ARATH (Q9ZQ99) Cytokinin-O-glucosyltransferase 1 (EC 2.4.1.-) (Zeatin| O-glucosyltransferase 1) (AtZOG1) Length = 491 Score = 37.7 bits (86), Expect = 0.022 Identities = 16/36 (44%), Positives = 25/36 (69%) Frame = +2 Query: 125 MVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTEFN 232 ++ PF AQGH+IP+++++R LA GV + V T N Sbjct: 12 VLFPFMAQGHMIPMVDIARLLAQRGVTITIVTTPQN 47
>ZOG_PHALU (Q9ZSK5) Zeatin O-glucosyltransferase (EC 2.4.1.203) (Trans-zeatin| O-beta-D-glucosyltransferase) Length = 459 Score = 35.4 bits (80), Expect = 0.11 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDT 223 V+++PFPAQGH+ + LSR + + V +V T Sbjct: 16 VLLIPFPAQGHLNQFLHLSRLIVAQNIPVHYVGT 49
>CNGT2_ARATH (Q9FIA0) Cytokinin-N-glucosyltransferase 2 (EC 2.4.1.-)| Length = 450 Score = 35.4 bits (80), Expect = 0.11 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +2 Query: 119 RVMVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHMLS 298 RV++ P P QG + P+++L+ L G + + T FN A K + L Sbjct: 9 RVILFPLPLQGCINPMLQLANILHVRGFSITVIHTRFN--------APKASSHPLFTFLQ 60 Query: 299 VPDGL 313 +PDGL Sbjct: 61 IPDGL 65
>HQGT_ARATH (Q9M156) Probable hydroquinone glucosyltransferase (EC 2.4.1.218)| (Arbutin synthase) Length = 480 Score = 34.7 bits (78), Expect = 0.18 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAG-HGVEVDFV 217 V ++P P GH+IPL+E +++L HG+ V FV Sbjct: 9 VAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFV 41
>HQGT_RAUSE (Q9AR73) Hydroquinone glucosyltransferase (EC 2.4.1.218) (Arbutin| synthase) Length = 470 Score = 34.7 bits (78), Expect = 0.18 Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 8/148 (5%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLA-GHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHMLS 298 + ++P P GH+IPL+E +++L H V F+ + L + A+P G++ + Sbjct: 7 IAMVPTPGMGHLIPLVEFAKRLVLRHNFGVTFI-IPTDGPLPKAQKSFLDALPAGVNYVL 65 Query: 299 VPDGLGPGDDHADIG-------KFVKDLPAAMSGRLEEMIRSRKINWVIVDVSMSWALEL 457 +P + D AD+ + LP ++ ++ + K+ ++VD+ + A ++ Sbjct: 66 LPP-VSFDDLPADVRIETRICLTITRSLPFVRDA-VKTLLATTKLAALVVDLFGTDAFDV 123 Query: 458 ATTAGARVASFSTYSAAVFSLRMNLPRL 541 A F +A SL +LP+L Sbjct: 124 AIEFKVSPYIFYPTTAMCLSLFFHLPKL 151
>CZOG_SORBI (Q6JAH0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215)| Length = 466 Score = 34.3 bits (77), Expect = 0.24 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDF 214 V+ +PFPAQGH+ L+ LS LA G+ V + Sbjct: 11 VVAVPFPAQGHLNQLLHLSLLLASRGLSVHY 41
>CZOG1_MAIZE (Q93XP7) Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215)| (cisZOG1) Length = 467 Score = 34.3 bits (77), Expect = 0.24 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDF 214 V+ +PFPAQGH+ L+ LS LA G+ V + Sbjct: 11 VVAVPFPAQGHLNQLLHLSLLLASRGLSVHY 41
>CZOG2_MAIZE (Q8RXA5) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215)| (cisZOG2) Length = 463 Score = 34.3 bits (77), Expect = 0.24 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDF 214 V+ +PFPAQGH+ L+ LS LA G+ V + Sbjct: 11 VVAVPFPAQGHLNQLLHLSLLLASRGLSVHY 41
>GPMI_GLUOX (Q5FU33) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 510 Score = 33.9 bits (76), Expect = 0.31 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Frame = +2 Query: 230 NHDLVIGSMAEKGAIPQGIHMLSVPDGLGPGDDHADIGKFVKDLP-----AAMSGRLEEM 394 +H + + + +P +H+ S P IGKF+K+LP A +SGR M Sbjct: 131 DHVVALTKIVSAAGVPVAVHIFSDGRDTAPRSGEDFIGKFLKELPDSVQIATLSGRYYAM 190 Query: 395 IRSRK 409 R R+ Sbjct: 191 DRDRR 195
>CI072_HUMAN (Q96LT7) Protein C9orf72| Length = 481 Score = 33.1 bits (74), Expect = 0.53 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = +2 Query: 149 GHVIPLMELSRKLAGHGV--EVDFVDTEFNHDLVIGSMAEKGAIPQGI--HMLSVPDGLG 316 G VIP+MEL + H V E+D DT N D IG +G + I H+ + + Sbjct: 178 GEVIPVMELLSSMKSHSVPEEIDIADTVLNDD-DIGDSCHEGFLLNAISSHLQTCGCSVV 236 Query: 317 PGDDHADIGKFVKDL 361 G + K V+ L Sbjct: 237 VGSSAEKVNKIVRTL 251
>CNGT1_ARATH (Q9FI99) Cytokinin-N-glucosyltransferase 1 (EC 2.4.1.-)| Length = 464 Score = 32.7 bits (73), Expect = 0.69 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = +2 Query: 119 RVMVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTEFN 232 +V++ P P QG + P+++L++ L G + + T FN Sbjct: 8 QVILFPLPLQGCINPMLQLAKILYSRGFSITIIHTRFN 45
>CI072_MOUSE (Q6DFW0) Protein C9orf72 homolog| Length = 420 Score = 32.0 bits (71), Expect = 1.2 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = +2 Query: 149 GHVIPLMELSRKLAGHGV--EVDFVDTEFNHDLVIGSMAEKGAIPQGI--HMLSVPDGLG 316 G VIP+MEL + H V ++D DT N D IG +G + I H+ + + Sbjct: 178 GEVIPVMELLASMKSHSVPEDIDIADTVLNDD-DIGDSCHEGFLLNAISSHLQTCGCSVV 236 Query: 317 PGDDHADIGKFVKDL 361 G + K V+ L Sbjct: 237 VGSSAEKVNKIVRTL 251
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +2 Query: 275 PQGIHMLSVPDGLGPGDDHADIGKFVKDLPAAMSGRLEEMIR 400 P G+ V G GPGDD A + D+P + SGR+ E ++ Sbjct: 380 PTGVDSTGVIAGEGPGDDKA-MAAAAPDVPLSTSGRIRETVQ 420
>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid| glucosyltransferase) (Limonoid GTase) (LGTase) Length = 511 Score = 31.2 bits (69), Expect = 2.0 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 10/142 (7%) Frame = +2 Query: 122 VMVLPFPAQGHVIPLMELSRKLAGHGVEVDFVDTE-FNHDLVIGSMAEKGAIPQG---IH 289 V+++ FP GHV PL+ L R LA G + E F + P G I Sbjct: 9 VLLVSFPGHGHVNPLLRLGRLLASKGFFLTLTTPESFGKQMRKAGNFTYEPTPVGDGFIR 68 Query: 290 MLSVPDGLGPGDD-HADIGKFVKDLPAAMSGRLEEMIRS-----RKINWVIVDVSMSWAL 451 DG D D+ +++ L + ++I+ R ++ +I + + W Sbjct: 69 FEFFEDGWDEDDPRREDLDQYMAQLELIGKQVIPKIIKKSAEEYRPVSCLINNPFIPWVS 128 Query: 452 ELATTAGARVASFSTYSAAVFS 517 ++A + G A S A F+ Sbjct: 129 DVAESLGLPSAMLWVQSCACFA 150
>CI072_RAT (Q66HC3) Protein C9orf72 homolog| Length = 481 Score = 31.2 bits (69), Expect = 2.0 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = +2 Query: 149 GHVIPLMELSRKLAGHGV--EVDFVDTEFNHDLVIGSMAEKGAIPQGI--HMLSVPDGLG 316 G VIP+MEL + H V ++D DT N D IG +G + I H+ + + Sbjct: 178 GEVIPVMELLASMRSHSVPEDLDIADTVLNDD-DIGDSCHEGFLLNAISSHLQTCGCSVV 236 Query: 317 PGDDHADIGKFVKDL 361 G + K V+ L Sbjct: 237 VGSSAEKVNKIVRTL 251
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 31.2 bits (69), Expect = 2.0 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 16/132 (12%) Frame = -2 Query: 468 AVVASSSAQLMDTSTITQLIFLDRI---------------ISSRRPDMAAGKSLTNLPMS 334 ++ +SSS ++DT+TI+ + I+S P + K T++P S Sbjct: 135 SITSSSSTSIVDTTTISPTLTSTSTTPLTTASTSTTPSTDITSALPTTTSTKLSTSIPTS 194 Query: 333 AWSSPGPRPSGTESMCIP*GI-APFSAIDPMTRSWLNSVSTKSTSTPCPASLRDSSMSGI 157 SS S + S + + S T S L S ST S+S+ P + + +S Sbjct: 195 TTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPISTS 254 Query: 156 TWPCAGKGSTIT 121 T ++ T Sbjct: 255 TTSSTSTSTSTT 266
>MSH4_MOUSE (Q99MT2) MutS protein homolog 4 (mMsh4)| Length = 958 Score = 30.8 bits (68), Expect = 2.6 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = -2 Query: 366 AGKSLTNLPMSAWSSPGPRPSGTESMCIP*GIAPFSAIDPMTRSWLNSVSTKSTSTPCPA 187 AG+ L S SSP PS ++ C G SA P T + S+ S+S+P PA Sbjct: 45 AGEMLRQEAASLSSSPRWTPSRRDAPC---GRTLASASRPSTEGAMADRSSSSSSSPAPA 101 Query: 186 SLRDSS 169 S SS Sbjct: 102 SAPGSS 107
>YE95_SCHPO (O13767) Hypothetical protein C17A5.05c in chromosome I| Length = 247 Score = 30.0 bits (66), Expect = 4.5 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -1 Query: 244 DEVVVELGVHEVDLDAVSGELARQLHEWDHM 152 DE G+H +DL SGE++ + EW+H+ Sbjct: 58 DEKFKSHGLHVIDLACGSGEVSETVIEWEHL 88
>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1222 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Frame = -2 Query: 339 MSAWSSPG---PRPSGTESMCIP*GIAPFSAIDPMTRSWLNSVSTKSTSTPCPASLRDSS 169 +S+WS P P P P P S+ +P +W+ + K+ + CP S Sbjct: 70 LSSWSQPASLLPEPPDPPDSAGPTRSPPSSSKEPPEGTWMGAAPVKAVDSACPELTGSSG 129 Query: 168 MSGITWP 148 G P Sbjct: 130 GPGSREP 136
>ARMX6_HUMAN (Q7L4S7) Protein ARMCX6| Length = 300 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/64 (23%), Positives = 32/64 (50%) Frame = -2 Query: 354 LTNLPMSAWSSPGPRPSGTESMCIP*GIAPFSAIDPMTRSWLNSVSTKSTSTPCPASLRD 175 L +L M+ +SP P P+ E++C P + + ++N V ++ S C + L+ Sbjct: 157 LASLSMARNTSPTPDPTVREALCAPDNLNASIESQGQIKMYINEVCRETVSRCCNSFLQQ 216 Query: 174 SSMS 163 + ++ Sbjct: 217 AGLN 220
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 30.0 bits (66), Expect = 4.5 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%) Frame = -2 Query: 480 TRAPAVVASSSAQLMDTSTITQLIFLDRIISSRRPDMAAGKSLTNLPMSAWSSPGPRPSG 301 T + + SSSA + ++T + + SS +A + + S+ P P S Sbjct: 460 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSST 519 Query: 300 TESMCIP*GIAPFSAIDPMTRSWLNSVSTKSTSTPCP---ASLRDSSMSGIT 154 TES P P S+ + + + S +T+S+S P P +S +SS + +T Sbjct: 520 TESSSAP-APTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVT 570
>CADH2_RAT (Q9Z1Y3) Neural-cadherin precursor (N-cadherin) (Cadherin-2)| Length = 906 Score = 30.0 bits (66), Expect = 4.5 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = +2 Query: 185 LAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHML---SVPDGLGPGDDHADIGKFVK 355 L H V+++ E D+VI + P+ +H + SVP+G PG + Sbjct: 235 LRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDA 294 Query: 356 DLPAAMSGRLEEMIRSR 406 D P A++G L I S+ Sbjct: 295 DDPNALNGMLRYRILSQ 311
>CADH2_MOUSE (P15116) Neural-cadherin precursor (N-cadherin) (Cadherin-2)| Length = 906 Score = 30.0 bits (66), Expect = 4.5 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = +2 Query: 185 LAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHML---SVPDGLGPGDDHADIGKFVK 355 L H V+++ E D+VI + P+ +H + SVP+G PG + Sbjct: 235 LRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDA 294 Query: 356 DLPAAMSGRLEEMIRSR 406 D P A++G L I S+ Sbjct: 295 DDPNALNGMLRYRILSQ 311
>YIN3_SCHPO (O13960) Hypothetical protein C1705.03c precursor| Length = 421 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = -2 Query: 264 FSAIDPMTRSWLN---SVSTKSTSTPCPASLRDSSMSGITWPCAGKGSTIT 121 FS+ID S + +V TK+T+ CP S DS + G + C G +TI+ Sbjct: 301 FSSIDMPDLSDVKGALTVETKATNFTCPWSNDDSVIKGDDFTCQGSVATIS 351
>CADH2_CRIGR (O55075) Neural-cadherin (N-cadherin) (Cadherin-2) (Fragment)| Length = 238 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = +2 Query: 185 LAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHML---SVPDGLGPGDDHADIGKFVK 355 L H V+++ E D+VI + P+ +H + SVP+G PG + Sbjct: 14 LRAHAVDINGNRVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDA 73 Query: 356 DLPAAMSGRLEEMIRSR 406 D P A++G L I S+ Sbjct: 74 DDPNALNGMLRYRILSQ 90
>PO3F4_HUMAN (P49335) POU domain, class 3, transcription factor 4| (Brain-specific homeobox/POU domain protein 4) (Brain-4) (Brn-4) Length = 361 Score = 28.9 bits (63), Expect = 10.0 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = -2 Query: 468 AVVASSSAQLMDTSTITQLIFLDRIISSRRPDMAAGKSLTNLPMSAWSSPGPRPSGTES 292 + +A+S D + + L II R P +A TN P + +SP P PS T S Sbjct: 69 STLATSPLDQQDVKPGREDLQLGAIIHHRSPHVAHHSPHTNHPNAWGASPAPNPSITSS 127
>ASTL_HUMAN (Q6HA08) Astacin-like metalloendopeptidase precursor (EC 3.4.-.-)| (Oocyte astacin) (Ovastacin) Length = 431 Score = 28.9 bits (63), Expect = 10.0 Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 19/95 (20%) Frame = -2 Query: 387 SRRPDMAAGKSLTNLPMSAWSSPGPRPSGTESMCIP*GIAPFSAIDPMT----------- 241 SR PD +G S P+ A PG P G ES + A SA P T Sbjct: 320 SRSPD-PSGSSAGGQPVPA--GPGESPHGWESPALKKLSAEASARQPQTLASSPRSRPGA 376 Query: 240 --------RSWLNSVSTKSTSTPCPASLRDSSMSG 160 +SWL VSTK T A ++ + G Sbjct: 377 GAPGVAQEQSWLAGVSTKPTVPSSEAGIQPVPVQG 411
>YL71_CAEEL (Q20624) Hypothetical protein F49E2.1 in chromosome X| Length = 600 Score = 28.9 bits (63), Expect = 10.0 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +2 Query: 194 HGVEVDFVDTEFNHDL 241 H + +DFVDT FNHD+ Sbjct: 515 HPIRLDFVDTVFNHDI 530
>NKTR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer cells| cyclophilin-related protein) (NK-TR protein) Length = 1453 Score = 28.9 bits (63), Expect = 10.0 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = -1 Query: 448 CPAHGYIHDHPVDLPGS-DHLLEAAGHGGRQVLDKLADVRVVVPGPQAVRNREHVYPLRN 272 CPA + D+ P S HL E GG VL ++ + P + E V PL N Sbjct: 1084 CPAPLKVEDNTASSPPSAQHLEEHGPGGGEDVLQTDDNMEICTPDRTSPAKGEVVSPLAN 1143 Query: 271 RSL 263 L Sbjct: 1144 HRL 1146
>GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)| Length = 544 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = -2 Query: 327 SSPGPRPSGTESMCIP*GIAPFSAIDPMTRSWLNSVSTKSTSTPCPAS 184 S P P+ T S IP ++P + P T S ++K TSTP P S Sbjct: 126 SKPTSTPTSTPSQTIPPTVSP--TVPPQT----TSPTSKPTSTPTPTS 167
>CADH2_PONPY (Q5R9X1) Neural-cadherin precursor (N-cadherin) (Cadherin-2)| Length = 906 Score = 28.9 bits (63), Expect = 10.0 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = +2 Query: 185 LAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHML---SVPDGLGPGDDHADIGKFVK 355 L H V+++ E D+VI + P+ +H + +VP+G PG + Sbjct: 235 LRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGTVPEGSKPGTYVMTVTAIDA 294 Query: 356 DLPAAMSGRLEEMIRSR 406 D P A++G L I S+ Sbjct: 295 DDPNALNGMLRYRILSQ 311
>CADH2_BOVIN (P19534) Neural-cadherin precursor (N-cadherin) (Cadherin-2)| (Fragment) Length = 877 Score = 28.9 bits (63), Expect = 10.0 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = +2 Query: 185 LAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHML---SVPDGLGPGDDHADIGKFVK 355 L H V+++ E D+VI + P+ +H + +VP+G PG + Sbjct: 206 LRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGTVPEGSKPGTYVMTVTAIDA 265 Query: 356 DLPAAMSGRLEEMIRSR 406 D P A++G L I S+ Sbjct: 266 DDPNALNGMLRYRILSQ 282
>Y132_THEVO (Q97CG9) UPF0219 protein TV0132| Length = 351 Score = 28.9 bits (63), Expect = 10.0 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 9/95 (9%) Frame = +2 Query: 164 LMELSRKLAGHGVEVDFVDTEFNHDLVIGSMAEKGAIPQGIHMLSVPDGLGPGDDHADIG 343 L+ K G+ ++ ++ ++ G + G H+L+V G G G D DI Sbjct: 247 LLGFEEKQYKDGLITPYIGNTYSGSMMTGLSSILDVSKPGDHILAVSFGSGAGSDAFDI- 305 Query: 344 KFVKDLPAAMSGRLEEMIRSR---------KINWV 421 ++ R+EEM R++ KI WV Sbjct: 306 --------TVTDRIEEMDRNKAPTIKKMLEKIKWV 332 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,129,063 Number of Sequences: 219361 Number of extensions: 1430447 Number of successful extensions: 4726 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4578 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4725 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
