ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart24d01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G09, full insert sequence Length = 995 Score = 498 bits (251), Expect = e-137 Identities = 395/443 (89%) Strand = Plus / Plus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 160 Query: 183 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 242 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 161 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 220 Query: 243 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 302 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 221 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 280 Query: 303 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 362 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 281 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 340 Query: 363 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 422 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 341 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 400 Query: 423 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 482 |||||| |||||||| ||||||||||| || || ||||||||||||||||| ||||| Sbjct: 401 attccgtttcaaatggggctatgagatgcccgtagacgtattagcaaaatggatagcaga 460 Query: 483 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 461 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 520 Query: 543 cctgggttatgatgaggagaaaa 565 | |||| ||||| || ||||||| Sbjct: 521 cttgggctatgacgaagagaaaa 543
>dbj|AK101031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K05, full insert sequence Length = 1048 Score = 490 bits (247), Expect = e-135 Identities = 394/443 (88%) Strand = Plus / Plus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 172 Query: 183 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 242 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 173 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 232 Query: 243 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 302 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 233 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 292 Query: 303 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 362 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 293 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 352 Query: 363 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 422 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 353 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 412 Query: 423 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 482 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 413 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 472 Query: 483 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 473 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 532 Query: 543 cctgggttatgatgaggagaaaa 565 | |||| ||||| || ||||||| Sbjct: 533 cttgggctatgacgaagagaaaa 555
>dbj|AK060026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C02, full insert sequence Length = 1043 Score = 490 bits (247), Expect = e-135 Identities = 394/443 (88%) Strand = Plus / Plus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 160 Query: 183 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 242 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 161 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 220 Query: 243 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 302 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 221 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 280 Query: 303 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 362 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 281 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 340 Query: 363 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 422 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 341 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 400 Query: 423 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 482 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 401 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 460 Query: 483 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 461 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 520 Query: 543 cctgggttatgatgaggagaaaa 565 | |||| ||||| || ||||||| Sbjct: 521 cttgggctatgacgaagagaaaa 543
>dbj|AK059929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A07, full insert sequence Length = 1042 Score = 490 bits (247), Expect = e-135 Identities = 394/443 (88%) Strand = Plus / Plus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 173 Query: 183 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 242 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 174 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 233 Query: 243 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 302 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 234 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 293 Query: 303 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 362 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 294 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 353 Query: 363 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 422 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 354 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 413 Query: 423 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 482 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 414 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 473 Query: 483 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 474 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 533 Query: 543 cctgggttatgatgaggagaaaa 565 | |||| ||||| || ||||||| Sbjct: 534 cttgggctatgacgaagagaaaa 556
>dbj|AB026558.1| Oryza sativa (japonica cultivar-group) OsPAA1 mRNA for alpha 1 subunit of 20S proteasome, complete cds Length = 1010 Score = 490 bits (247), Expect = e-135 Identities = 394/443 (88%) Strand = Plus / Plus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 138 Query: 183 ccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgat 242 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct: 139 ccgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgat 198 Query: 243 cggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagtt 302 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 199 cggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagtt 258 Query: 303 gttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgc 362 | |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| || Sbjct: 259 gctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgc 318 Query: 363 caccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccga 422 ||| ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 319 cactggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctga 378 Query: 423 gttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcaga 482 |||||| |||||||| || |||||||| || || ||||||||||||||||| ||||| Sbjct: 379 attccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcaga 438 Query: 483 caaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 |||||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||| Sbjct: 439 caaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggt 498 Query: 543 cctgggttatgatgaggagaaaa 565 | |||| ||||| || ||||||| Sbjct: 499 cttgggctatgacgaagagaaaa 521
>ref|XM_470540.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 741 Score = 488 bits (246), Expect = e-134 Identities = 393/442 (88%) Strand = Plus / Plus Query: 124 atgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggagggc 183 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggagggc 60 Query: 184 cgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatc 243 ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 61 cgcctctaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatc 120 Query: 244 ggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaagttg 303 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 121 ggcgtccgcggcaaggactccgtctgcgtcgtcacacagaagaaagtgccggacaagttg 180 Query: 304 ttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgcttgcc 363 |||| | || ||| |||||||| | ||| | || |||||||||| ||| |||| ||| Sbjct: 181 ctggaccatacgagcgtcacgcacttgttcccgatcaccaagtacatcggtctgctcgcc 240 Query: 364 accggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgag 423 || ||||||||||||||||| |||||||| |||| ||||||||| ||||| ||||| || Sbjct: 241 actggcctcacagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaa 300 Query: 424 ttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgcagac 483 |||||| |||||||| || |||||||| || || ||||||||||||||||| |||||| Sbjct: 301 ttccgtttcaaatggggctacgagatgcccgtagacgtattagcaaaatggatagcagac 360 Query: 484 aaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctatggtc 543 ||||||||| | |||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 361 aaagcacaagtctacacgcagcatgcctacatgaggccccttggagtagttgctatggtc 420 Query: 544 ctgggttatgatgaggagaaaa 565 |||| ||||| || ||||||| Sbjct: 421 ttgggctatgacgaagagaaaa 442
>gb|AY104377.1| Zea mays PCO108605 mRNA sequence Length = 1142 Score = 448 bits (226), Expect = e-123 Identities = 391/446 (87%) Strand = Plus / Plus Query: 120 cgagatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccgga 179 |||||||||||| || | ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 87 cgagatgagccgtggcacaggcgcgggctatgaccgccacatcaccatcttctccccgga 146 Query: 180 gggccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctc 239 ||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 147 gggacgcctgtaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggtgtcacgtc 206 Query: 240 gatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 299 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gatcggcgtccgcggcgcggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 266 Query: 300 gttgttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgct 359 |||| ||||| | || ||| | || ||| | ||| | || ||||||||| ||| ||||| Sbjct: 267 gttgctggatcagacgagcgtgacacacttgttcccgatcaccaagtacgtcggattgct 326 Query: 360 tgccaccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagc 419 |||||| ||||||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 327 tgccactggcctcacagctgatgcaaggtcattggtttcccaagcaaggaacgaagcagc 386 Query: 420 cgagttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgc 479 ||||| ||| |||||||| ||||||||||| || ||||| ||||||||||||||||| Sbjct: 387 tgagtttcgtttcaaatggggctatgagatgccagttgatgtgttagcaaaatggattgc 446 Query: 480 agacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctat 539 |||||||| ||| | |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 447 tgacaaagctcaagtttacacgcaacatgcatacatgagaccccttggagtagttgctat 506 Query: 540 ggtcctgggttatgatgaggagaaaa 565 |||| |||| || || || ||||||| Sbjct: 507 ggtcttgggctacgacgaagagaaaa 532
>emb|AJ293343.1|ZMA293343 Zea mays mRNA for maize 20S proteasome alpha subunit (paa gene) Length = 1040 Score = 416 bits (210), Expect = e-113 Identities = 387/446 (86%) Strand = Plus / Plus Query: 120 cgagatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccgga 179 |||||||||||| || | ||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 78 cgagatgagccgtggcacaggcgcgggctatgaccgccacatcaccatcttctccccgga 137 Query: 180 gggccgcctctaccaagtcgagtacgcgttcaaggcggtcaagtcggcgggggtcacctc 239 ||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct: 138 gggacgcctgtaccaagtcgagtacgcgttcaaggcggtgaagtcggcgggtgtcacgtc 197 Query: 240 gatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcccggacaa 299 |||||||||||| ||| ||||||||||||||| || || ||||||||||||||||| || Sbjct: 198 gatcggcgtccgcggcgcggactccgtctgcgttgttacgcagaagaaagtcccggataa 257 Query: 300 gttgttggatgacaccagcatcacgcacctcttctccattaccaagtacaccggcttgct 359 |||| ||||| | || ||| | || ||||| ||| | || ||||||||| ||| ||||| Sbjct: 258 gttgctggatcagacgagcgtgacacacctgttcccgatcaccaagtacgtcggattgct 317 Query: 360 tgccaccggcctcacagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagc 419 |||||| ||||| |||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 318 tgccactggccttacagctgatggtaggtcattggtttcccaagcaaggaacgaagcagc 377 Query: 420 cgagttccgtaaaaaatggggatatgagatgcctgtggatgtattagcaaaatggattgc 479 ||||| ||| |||||||| || |||||||| || ||||| ||||||||||||||||| Sbjct: 378 tgagtttcgtttcaaatggggctacgagatgccagttgatgtgttagcaaaatggattgc 437 Query: 480 agacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtagttgctat 539 |||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 438 tgacaaagctcaagtttacacgcagcatgcatacatgagaccccttggagtagttgctat 497 Query: 540 ggtcctgggttatgatgaggagaaaa 565 |||| |||| || ||||| ||||||| Sbjct: 498 ggtcttgggctacgatgaagagaaaa 523
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 4194339 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 4194280 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccgg 295 |||||||||||||||||||| ||||||||||| |||| Sbjct: 4194279 gactccgtctgcgtcgtcacacagaagaaagtgccgg 4194243 Score = 137 bits (69), Expect = 4e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4194552 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 4194493 Query: 183 ccgcctctaccaagtcg 199 ||||||||||||||||| Sbjct: 4194492 ccgcctctaccaagtcg 4194476 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 374 cagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgagttccgtaaaa 433 |||||||||| |||||||| |||| ||||||||| ||||| ||||| || |||||| | Sbjct: 4193453 cagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaattccgtttca 4193394 Query: 434 aatggggatatgagatgcctgtggatgtattagcaaaatgg 474 ||||||| || |||||||| || || ||||||||||||||| Sbjct: 4193393 aatggggctacgagatgcccgtagacgtattagcaaaatgg 4193353 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 473 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 532 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 4193239 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 4193180
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 4194448 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 4194389 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccgg 295 |||||||||||||||||||| ||||||||||| |||| Sbjct: 4194388 gactccgtctgcgtcgtcacacagaagaaagtgccgg 4194352 Score = 137 bits (69), Expect = 4e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4194661 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 4194602 Query: 183 ccgcctctaccaagtcg 199 ||||||||||||||||| Sbjct: 4194601 ccgcctctaccaagtcg 4194585 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 374 cagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgagttccgtaaaa 433 |||||||||| |||||||| |||| ||||||||| ||||| ||||| || |||||| | Sbjct: 4193562 cagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaattccgtttca 4193503 Query: 434 aatggggatatgagatgcctgtggatgtattagcaaaatgg 474 ||||||| || |||||||| || || ||||||||||||||| Sbjct: 4193502 aatggggctacgagatgcccgtagacgtattagcaaaatgg 4193462 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 473 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 532 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 4193348 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 4193289
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 94976 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 94917 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccgg 295 |||||||||||||||||||| ||||||||||| |||| Sbjct: 94916 gactccgtctgcgtcgtcacacagaagaaagtgccgg 94880 Score = 137 bits (69), Expect = 4e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95189 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 95130 Query: 183 ccgcctctaccaagtcg 199 ||||||||||||||||| Sbjct: 95129 ccgcctctaccaagtcg 95113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 374 cagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgagttccgtaaaa 433 |||||||||| |||||||| |||| ||||||||| ||||| ||||| || |||||| | Sbjct: 94090 cagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaattccgtttca 94031 Query: 434 aatggggatatgagatgcctgtggatgtattagcaaaatgg 474 ||||||| || |||||||| || || ||||||||||||||| Sbjct: 94030 aatggggctacgagatgcccgtagacgtattagcaaaatgg 93990 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 473 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 532 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 93876 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 93817
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 145 bits (73), Expect = 2e-31 Identities = 91/97 (93%) Strand = Plus / Minus Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 22954 gagtacgcgttcaaggcggtgaagtcggcgggggtgacgtcgatcggcgtccgcggcaag 22895 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccgg 295 |||||||||||||||||||| ||||||||||| |||| Sbjct: 22894 gactccgtctgcgtcgtcacacagaagaaagtgccgg 22858 Score = 137 bits (69), Expect = 4e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 123 gatgagccgcggatcgggcgccggctacgaccgccacatcaccatcttctccccggaggg 182 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23167 gatgagccgcggcacgggcgccggctacgaccgccacatcaccatcttctccccggaggg 23108 Query: 183 ccgcctctaccaagtcg 199 ||||||||||||||||| Sbjct: 23107 ccgcctctaccaagtcg 23091 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 374 cagctgatgcgaggtccttggtctcccaagcaagaaatgaagcagccgagttccgtaaaa 433 |||||||||| |||||||| |||| ||||||||| ||||| ||||| || |||||| | Sbjct: 22068 cagctgatgcaaggtccttagtctaccaagcaaggaatgaggcagctgaattccgtttca 22009 Query: 434 aatggggatatgagatgcctgtggatgtattagcaaaatgg 474 ||||||| || |||||||| || || ||||||||||||||| Sbjct: 22008 aatggggctacgagatgcccgtagacgtattagcaaaatgg 21968 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 473 ggattgcagacaaagcacaaatatacacgcagcatgcatacatgagaccccttggtgtag 532 |||| ||||||||||||||| | |||||||||||||| |||||||| |||||||| |||| Sbjct: 21854 ggatagcagacaaagcacaagtctacacgcagcatgcctacatgaggccccttggagtag 21795
>gb|AF034572.1|AF034572 Glycine max proteasome IOTA subunit mRNA, complete cds Length = 994 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 400 caagcaagaaatgaagcagccgagttccgtaaaaaatggggatatgagatgcctgtggat 459 |||||||||||||||||||| ||||| || | || ||||||||||||||||| ||| Sbjct: 391 caagcaagaaatgaagcagctgagtttcgctttacatatggatatgagatgcctgtagat 450 Query: 460 gtattagcaaaatggattgcagacaaagcacaaatatacacgcagcatgcatacatgaga 519 |||||||| |||||||||||||| ||| ||||| | || || || ||||| || |||||| Sbjct: 451 gtattagctaaatggattgcagataaatcacaagtctatactcaacatgcttatatgaga 510 Query: 520 ccccttggtgtagttgctatggt 542 || || || |||||||||||||| Sbjct: 511 ccactcggagtagttgctatggt 533
>ref|XM_479149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 115 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 174 Query: 201 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 175 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 234 Query: 261 ctccgtctgcgtcgtcaccca 281 |||||||| |||| ||||||| Sbjct: 235 ctccgtctacgtcctcaccca 255
>ref|XM_507390.1| PREDICTED Oryza sativa (japonica cultivar-group), P0616D06.113 mRNA Length = 1040 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 108 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 167 Query: 201 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 168 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 227 Query: 261 ctccgtctgcgtcgtcaccca 281 |||||||| |||| ||||||| Sbjct: 228 ctccgtctacgtcctcaccca 248
>ref|XM_506462.2| PREDICTED Oryza sativa (japonica cultivar-group), P0616D06.113 mRNA Length = 1610 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 126 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 185 Query: 201 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 186 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 245 Query: 261 ctccgtctgcgtcgtcaccca 281 |||||||| |||| ||||||| Sbjct: 246 ctccgtctacgtcctcaccca 266
>dbj|AK102448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093O06, full insert sequence Length = 1609 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 126 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 185 Query: 201 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 186 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 245 Query: 261 ctccgtctgcgtcgtcaccca 281 |||||||| |||| ||||||| Sbjct: 246 ctccgtctacgtcctcaccca 266
>dbj|AK069145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E07, full insert sequence Length = 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 115 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 174 Query: 201 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 175 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 234 Query: 261 ctccgtctgcgtcgtcaccca 281 |||||||| |||| ||||||| Sbjct: 235 ctccgtctacgtcctcaccca 255
>dbj|AK058885.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C05, full insert sequence Length = 1040 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 108 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 167 Query: 201 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 168 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 227 Query: 261 ctccgtctgcgtcgtcaccca 281 |||||||| |||| ||||||| Sbjct: 228 ctccgtctacgtcctcaccca 248
>dbj|AB032062.1| Oryza sativa (japonica cultivar-group) OsPAA2 mRNA for alpha 1-2 subunit of 20S proteasome, complete cds Length = 1004 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 78 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcga 137 Query: 201 gtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaagga 260 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | || Sbjct: 138 ctacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacga 197 Query: 261 ctccgtctgcgtcgtcaccca 281 |||||||| |||| ||||||| Sbjct: 198 ctccgtctacgtcctcaccca 218
>ref|XM_421242.1| PREDICTED: Gallus gallus similar to Proteasome subunit alpha type 6 (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (LOC423326), mRNA Length = 1036 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 ||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 84 gcgccggcttcgaccgccacatcaccatcttttcgcccgagggccgcctctaccaagtcg 143 Query: 200 agta 203 |||| Sbjct: 144 agta 147
>emb|CR390124.1| Gallus gallus finished cDNA, clone ChEST163e7 Length = 956 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 ||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 85 gcgccggcttcgaccgccacatcaccatcttttcgcccgagggccgcctctaccaagtcg 144 Query: 200 agta 203 |||| Sbjct: 145 agta 148
>gb|DQ213268.1| Taeniopygia guttata clone 0061P0013H01 proteasome subunit alpha type 6-like mRNA, complete sequence Length = 977 Score = 89.7 bits (45), Expect = 9e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 ||||||||| |||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 91 gcgccggcttcgaccggcacatcaccatcttctcgcccgagggccgcctctaccaagtcg 150 Query: 200 a 200 | Sbjct: 151 a 151
>ref|NM_165567.1| Drosophila melanogaster CG30382-RA (CG30382), mRNA Length = 735 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 215 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 34 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 92
>ref|NM_165565.1| Drosophila melanogaster Proteasome 6 subunit CG18495-RA, transcript variant A (Prosalpha6), mRNA Length = 887 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 215 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 86 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 144
>ref|NM_080098.2| Drosophila melanogaster Proteasome 6 subunit CG18495-RB, transcript variant B (Prosalpha6), mRNA Length = 969 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 215 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 168 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 226
>gb|AY118637.1| Drosophila melanogaster SD02332 full insert cDNA Length = 971 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 215 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 138 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 196
>gb|AF144749.1|AF144749 Drosophila melanogaster 20S proteasome subunit alpha1 mRNA, complete cds Length = 888 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 215 |||||||| |||||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct: 100 cacatcacgatcttctctccggagggacgcctctaccaagtggagtacgccttcaaggc 158
>emb|Y16644.1|NTY16644 Nicotiana tabacum mRNA for proteasome A-type subunit Length = 1035 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 439 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 498 |||||||| ||||| ||||||||| | | ||||||||||||||||| | || | ||| Sbjct: 384 ggatatgaaatgccagtggatgtactgtctaaatggattgcagacaagtctcaggtttac 443 Query: 499 acgcagcatgcatacatgagaccccttggtgtagttgctatg 540 || |||||||| || |||||||||||||| |||||||||||| Sbjct: 444 acacagcatgcctatatgagaccccttggagtagttgctatg 485 Score = 67.9 bits (34), Expect = 3e-08 Identities = 133/166 (80%) Strand = Plus / Plus Query: 144 cggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagta 203 ||||||||| || ||||| || |||||||| || || || || |||| |||||||| || Sbjct: 89 cggctacgatcgtcacattacgatcttctctcccgaaggtcgtctctttcaagtcgaata 148 Query: 204 cgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggactc 263 ||||| ||||| || ||| |||| || | ||||| || |||||||| || |||||||| Sbjct: 149 tgcgtttaaggctgtgaaggcggccggaattacctctattggcgtccgtggaaaggactc 208 Query: 264 cgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 ||| || || || || |||||||||||||| |||||| | |||||| Sbjct: 209 cgtttgtgttgttactcagaagaaagtccctgacaagctattggat 254
>ref|NM_126597.2| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.1 mRNA, complete cds Length = 1093 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 139 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 198 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 132 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 191 Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 192 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 251 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 252 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 302 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 496 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 489 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 535
>ref|NM_001036263.1| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.2 mRNA, complete cds Length = 1114 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 139 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 198 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 150 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 209 Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 210 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 269 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 270 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 320 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 496 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 507 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 553
>gb|AY143829.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 741 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 139 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 198 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 16 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 75 Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 76 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 135 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 136 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 186 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 496 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 373 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 419
>ref|XM_963562.1| PREDICTED: Tribolium castaneum similar to proteasome (prosome, macropain) subunit, alpha type 6 (LOC657082), mRNA Length = 815 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 150 cgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgtt 209 |||||||||||| ||||| |||||||| ||||| || ||||||||||||||||| || || Sbjct: 27 cgaccgccacattaccattttctcccccgaggggcggctctaccaagtcgagtatgcctt 86 Query: 210 caa 212 ||| Sbjct: 87 caa 89
>gb|AY052679.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 1014 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 139 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 198 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 75 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 134 Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 135 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 194 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 195 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 245 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 496 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 432 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 478
>gb|AF043519.1|AF043519 Arabidopsis thaliana 20S proteasome subunit PAA2 (PAA2) mRNA, complete cds Length = 1113 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 139 ggcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtc 198 ||||| || ||||| || |||||||| || ||||| ||||| || || |||| ||||||| Sbjct: 132 ggcgctggttacgatcgtcacatcactattttctcaccggaaggtcgtctcttccaagtc 191 Query: 199 gagtacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaag 258 ||||| || ||||| || || || | || || |||| |||||||| |||||||| || Sbjct: 192 gagtatgctttcaaagccgtgaaagcagctggaatcacatcgatcggtgtccgagggaaa 251 Query: 259 gactccgtctgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 || || || |||||||| || ||||||||||| ||||||||| | |||||| Sbjct: 252 gattcagtatgcgtcgttacgcagaagaaagttccggacaagcttttggat 302 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 496 tacacgcagcatgcatacatgagaccccttggtgtagttgctatggt 542 ||||| || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 489 tacacacaacatgcttacatgagaccccttggagtagttgccatggt 535
>emb|CR733852.2|CNS0GT0R Tetraodon nigroviridis full-length cDNA Length = 1005 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 184 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 233
>emb|CR723142.2|CNS0GKX8 Tetraodon nigroviridis full-length cDNA Length = 990 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 171 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 220
>emb|CR707063.2|CNS0G8IR Tetraodon nigroviridis full-length cDNA Length = 996 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 181 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 230
>emb|CR695416.2|CNS0FZJ8 Tetraodon nigroviridis full-length cDNA Length = 1003 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 174 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 223
>emb|CR664013.2|CNS0FBBN Tetraodon nigroviridis full-length cDNA Length = 974 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 145 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 194
>emb|CR663453.2|CNS0FAW3 Tetraodon nigroviridis full-length cDNA Length = 994 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 170 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 219
>emb|CR653857.2|CNS0F3HJ Tetraodon nigroviridis full-length cDNA Length = 998 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || ||||||||||||||||||||||||||||| Sbjct: 169 gaccgacatatcaccatattttccccggagggccgcctctaccaagtcga 218
>gb|AY231750.1| Drosophila yakuba clone yak-em_Prosalpha6 mRNA sequence Length = 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggc 215 ||||| || |||||||| |||||||| |||||||||||||| |||||||| || ||||| Sbjct: 34 cacattacaatcttctctccggagggacgcctctaccaagtggagtacgcctttaaggc 92
>gb|AC146756.17| Medicago truncatula clone mth2-15l17, complete sequence Length = 120437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 400 caagcaagaaatgaagcagccgagttccgtaaaaaatggggatatgagatgcctgtggat 459 |||||||||||||||||||| ||||| || | |||| |||||||||||||| |||||| Sbjct: 46358 caagcaagaaatgaagcagctgagtttcgccataaatttggatatgagatgccggtggat 46299 Query: 460 gtattagcaaaatgg 474 || || || |||||| Sbjct: 46298 gtgttggctaaatgg 46284
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaa 195 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 25240037 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaa 25239983 Score = 40.1 bits (20), Expect = 7.8 Identities = 65/80 (81%) Strand = Plus / Minus Query: 202 tacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggac 261 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | ||| Sbjct: 25239841 tacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacgac 25239782 Query: 262 tccgtctgcgtcgtcaccca 281 ||||||| |||| ||||||| Sbjct: 25239781 tccgtctacgtcctcaccca 25239762
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 141 cgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaa 195 ||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||| Sbjct: 56708 cgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaa 56654 Score = 40.1 bits (20), Expect = 7.8 Identities = 65/80 (81%) Strand = Plus / Minus Query: 202 tacgcgttcaaggcggtcaagtcggcgggggtcacctcgatcggcgtccgaggcaaggac 261 ||||||||||| || || ||| ||| ||| ||||||| ||||||| || ||| | ||| Sbjct: 56512 tacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacgac 56453 Query: 262 tccgtctgcgtcgtcaccca 281 ||||||| |||| ||||||| Sbjct: 56452 tccgtctacgtcctcaccca 56433
>gb|BC072719.1| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6b, mRNA (cDNA clone MGC:91778 IMAGE:7039953), complete cds Length = 1350 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 210 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 96 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 155 Query: 211 aaggc 215 ||||| Sbjct: 156 aaggc 160
>gb|AF354751.1| Danio rerio proteasome subunit alpha Type 6-B (psma6b) mRNA, complete cds Length = 1191 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 210 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 331 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 390 Query: 211 aaggc 215 ||||| Sbjct: 391 aaggc 395
>gb|BT014031.1| Lycopersicon esculentum clone 133094R, mRNA sequence Length = 1053 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 496 tacacgcagcatgcatacatgagaccccttggtgtagttgctatg 540 ||||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 450 tacacacagcatgcctatatgagaccccttggagtagttgctatg 494
>ref|XM_757288.1| Ustilago maydis 521 hypothetical protein (UM06234.1) partial mRNA Length = 918 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 161 tcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcggtca 220 ||||||||||||||||||| || || || ||||| |||||||| || ||||||||| ||| Sbjct: 29 tcaccatcttctccccggacggacggctgtaccaggtcgagtatgccttcaaggcgatca 88 Query: 221 a 221 | Sbjct: 89 a 89
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 20870353 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 20870412 Query: 206 c 206 | Sbjct: 20870413 c 20870413
>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone BACR04B09, complete sequence Length = 174707 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagt 197 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 43240 cacatcacgatcttctctccggagggacgcctctaccaagt 43280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagt 197 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 40130 cacatcacgatcttctctccggagggacgcctctaccaagt 40170
>ref|NM_131795.2| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6b (psma6b), mRNA Length = 1350 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 210 ||||| |||||||||||||||||||| ||||| ||| | || |||||||| || ||||| Sbjct: 96 gaccgacacatcaccatcttctcccccgagggacgcttatatcaagtcgaatatgcgttt 155 Query: 211 aaggc 215 ||||| Sbjct: 156 aaggc 160
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 62579 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 62638 Query: 206 c 206 | Sbjct: 62639 c 62639
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 145382 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 145441 Query: 206 c 206 | Sbjct: 145442 c 145442
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagt 197 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 43113 cacatcacgatcttctctccggagggacgcctctaccaagt 43073 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagt 197 |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 40003 cacatcacgatcttctctccggagggacgcctctaccaagt 39963
>dbj|AB032061.1| Oryza sativa (japonica cultivar-group) OsPAD1 mRNA for alpha 4 subunit of 20S proteasome, complete cds Length = 1007 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| |||||||||| || |||| ||||| ||| |||||||||| Sbjct: 50 gctacgaccgcgccatcaccgtcttctcccccgacggccacctcttccaggtcgagtacg 109 Query: 206 c 206 | Sbjct: 110 c 110
>emb|BX072129.1|CNS09RTH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 901 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 |||| |||| ||| ||||| || || ||||| || ||||| ||||||||||||||||| | Sbjct: 840 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgcctctaccaagttg 781 Query: 200 agtacgcgttcaaggc 215 |||| || |||||||| Sbjct: 780 agtatgccttcaaggc 765
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 163 accatcttctccccggagggccgcctctaccaagtcgagtacgc 206 ||||||||||||||||| || |||||||| || ||||||||||| Sbjct: 1579176 accatcttctccccggacggacgcctctatcaggtcgagtacgc 1579133 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 147 ctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgc 206 |||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 1050899 ctacgaccgcgggatcactatcttctcgccggacggacgcctctaccaggtcgagtacgc 1050840
>ref|NM_011968.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 6 (Psma6), mRNA Length = 945 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 197 ||||||||||| || |||||||| || |||||||| ||||||||||| Sbjct: 61 gaccgccacattactatcttctctcccgagggccgactctaccaagt 107
>ref|XM_501500.1| Yarrowia lipolytica CLIB122, YALI0C06039g predicted mRNA Length = 735 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 154 cgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaa 212 |||||||| |||||||| || || |||||||| || ||||| ||||||||||| ||||| Sbjct: 25 cgccacattaccatcttttcgcctgagggccgactgtaccaggtcgagtacgccttcaa 83
>gb|U60288.1|MMU60288 Mus musculus proteasome subunit iota mRNA, complete cds Length = 945 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 197 ||||||||||| || |||||||| || |||||||| ||||||||||| Sbjct: 61 gaccgccacattactatcttctctcccgagggccgactctaccaagt 107
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 154 cgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaa 212 |||||||| |||||||| || || |||||||| || ||||| ||||||||||| ||||| Sbjct: 777476 cgccacattaccatcttttcgcctgagggccgactgtaccaggtcgagtacgccttcaa 777418
>ref|XM_514761.1| PREDICTED: Pan troglodytes similar to Proteasome subunit alpha type 7 (Proteasome subunit RC6-1) (LOC458383), mRNA Length = 920 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 130 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 189 Query: 206 cg 207 || Sbjct: 190 cg 191
>gb|BC004427.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7, transcript variant 1, mRNA (cDNA clone MGC:3755 IMAGE:2819923), complete cds Length = 967 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 78 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 137 Query: 206 cg 207 || Sbjct: 138 cg 139
>gb|BC008222.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7, mRNA (cDNA clone MGC:6440 IMAGE:2581897), complete cds Length = 892 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 29 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 88 Query: 206 cg 207 || Sbjct: 89 cg 90
>ref|XM_956973.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 159 catcaccatcttctccccggagggccgcctctaccaagtcgagtac 204 ||||| || ||||||||| || |||||||||| ||||||||||||| Sbjct: 33 catcaacaccttctcccccgaaggccgcctcttccaagtcgagtac 78
>ref|XM_324651.1| Neurospora crassa OR74A hypothetical protein (NCU05295.1) partial mRNA Length = 738 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 159 catcaccatcttctccccggagggccgcctctaccaagtcgagtac 204 ||||| || ||||||||| || |||||||||| ||||||||||||| Sbjct: 33 catcaacaccttctcccccgaaggccgcctcttccaagtcgagtac 78
>ref|NM_001008217.1| Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 908 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 68 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 127 Query: 206 cg 207 || Sbjct: 128 cg 129
>ref|NM_011969.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 881 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 93 Query: 206 cg 207 || Sbjct: 94 cg 95
>gb|BC014999.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7, mRNA (cDNA clone IMAGE:4851079), containing frame-shift errors Length = 798 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 88 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 147 Query: 206 cg 207 || Sbjct: 148 cg 149
>emb|CR731238.2|CNS0GR63 Tetraodon nigroviridis full-length cDNA Length = 975 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || |||||||||| |||||||||||||||||| Sbjct: 158 gaccgacatatcaccatattttccccggagg-ccgcctctaccaagtcga 206
>emb|CR640479.2|CNS0ET5X Tetraodon nigroviridis full-length cDNA Length = 1015 Score = 52.0 bits (26), Expect = 0.002 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || |||||||||| |||||||||||||||||| Sbjct: 184 gaccgacatatcaccatattttccccggagg-ccgcctctaccaagtcga 232
>emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005F21 on chromosome 20 Contains the PSMA7 gene for proteasome (prosome, macropain) subunit alpha type 7, the HRH3 gene for histamine receptor H3, the SS18L1 gene for synovial sarcoma translocation gene on chromosome 18-like 1, the GTPBP5 gene for GTP binding protein 5 (putative), the 3' end of the C20orf40 gene for a novel protein similar to Pleurodeles waltlii RAP55 protein and seven CpG islands, complete sequence Length = 100976 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 92377 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 92436 Query: 206 cg 207 || Sbjct: 92437 cg 92438
>gb|BT007466.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 206 cg 207 || Sbjct: 65 cg 66
>gb|BT007165.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 mRNA, complete cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 206 cg 207 || Sbjct: 65 cg 66
>emb|CR857931.1| Pongo pygmaeus mRNA; cDNA DKFZp469N104 (from clone DKFZp469N104) Length = 1056 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 58 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 117 Query: 206 cg 207 || Sbjct: 118 cg 119
>emb|CR615593.1| full-length cDNA clone CS0DI074YF03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 36 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 95 Query: 206 cg 207 || Sbjct: 96 cg 97
>emb|CR624293.1| full-length cDNA clone CS0DF011YJ24 of Fetal brain of Homo sapiens (human) Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 54 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 113 Query: 206 cg 207 || Sbjct: 114 cg 115
>emb|CR622362.1| full-length cDNA clone CS0DM009YO06 of Fetal liver of Homo sapiens (human) Length = 889 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 115 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 174 Query: 206 cg 207 || Sbjct: 175 cg 176
>emb|CR618955.1| full-length cDNA clone CS0DB003YC01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 926 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 115 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 174 Query: 206 cg 207 || Sbjct: 175 cg 176
>emb|CR616396.1| full-length cDNA clone CS0DC027YF09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 953 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 87 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 146 Query: 206 cg 207 || Sbjct: 147 cg 148
>emb|CR611945.1| full-length cDNA clone CS0DK003YA15 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 973 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 140 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 199 Query: 206 cg 207 || Sbjct: 200 cg 201
>emb|CR603718.1| full-length cDNA clone CS0DI042YM18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 953 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 87 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 146 Query: 206 cg 207 || Sbjct: 147 cg 148
>emb|CR600945.1| full-length cDNA clone CS0DC026YF03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 142 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 201 Query: 206 cg 207 || Sbjct: 202 cg 203
>emb|CR600734.1| full-length cDNA clone CS0DC018YO10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 984 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 119 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 178 Query: 206 cg 207 || Sbjct: 179 cg 180
>emb|CR596694.1| full-length cDNA clone CS0DI011YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 815 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 104 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 163 Query: 206 cg 207 || Sbjct: 164 cg 165
>dbj|AK146765.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920051K20 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 53 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 112 Query: 206 cg 207 || Sbjct: 113 cg 114
>dbj|AK165563.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3B3 cDNA, RIKEN full-length enriched library, clone:G430008L02 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 896 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 49 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 108 Query: 206 cg 207 || Sbjct: 109 cg 110
>dbj|AK168234.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730069P12 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 914 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 66 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 125 Query: 206 cg 207 || Sbjct: 126 cg 127
>dbj|AK088615.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021K02 product:proteasome (prosome, macropain) subunit, alpha type 7, full insert sequence Length = 888 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 41 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 100 Query: 206 cg 207 || Sbjct: 101 cg 102
>gb|BC001895.1|BC001895 Homo sapiens, Similar to proteasome (prosome, macropain) subunit, alpha type, 7, clone IMAGE:3535769, mRNA Length = 805 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 93 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 152 Query: 206 cg 207 || Sbjct: 153 cg 154
>ref|NM_002792.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 (PSMA7), mRNA Length = 984 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 120 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 179 Query: 206 cg 207 || Sbjct: 180 cg 181
>gb|AF054185.1|AF054185 Homo sapiens proteasome subunit HSPC mRNA, complete cds Length = 969 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 90 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 149 Query: 206 cg 207 || Sbjct: 150 cg 151
>gb|BC014752.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 7, mRNA (cDNA clone IMAGE:4218885), with apparent retained intron Length = 1572 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 27 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 86 Query: 206 cg 207 || Sbjct: 87 cg 88
>ref|XM_579184.1| PREDICTED: Rattus norvegicus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA Length = 908 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 68 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 127 Query: 206 cg 207 || Sbjct: 128 cg 129
>gb|AY892046.1| Synthetic construct Homo sapiens clone FLH024047.01L proteasome subunit alpha type 7 (PSMA7) mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 206 cg 207 || Sbjct: 65 cg 66
>gb|AY892045.1| Synthetic construct Homo sapiens clone FLH024046.01L proteasome subunit alpha type 7 (PSMA7) mRNA, partial cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 206 cg 207 || Sbjct: 65 cg 66
>gb|AY889591.1| Synthetic construct Homo sapiens clone FLH024051.01X proteasome subunit alpha type 7 (PSMA7) mRNA, complete cds Length = 747 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 5 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 64 Query: 206 cg 207 || Sbjct: 65 cg 66
>gb|AF019662.1|AF019662 Mus musculus C6-I proteasome chain mRNA, complete cds Length = 881 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 93 Query: 206 cg 207 || Sbjct: 94 cg 95
>gb|AF022815.1|AF022815 Homo sapiens proteasome subunit XAPC7 mRNA, complete cds Length = 893 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 29 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 88 Query: 206 cg 207 || Sbjct: 89 cg 90
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 163243 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 163184 Query: 206 cg 207 || Sbjct: 163183 cg 163182
>dbj|D30804.1|RATPSRC6I Rat mRNA for proteasome subunit RC6-1, complete cds Length = 900 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| || || |||| ||||| |||||| ||||||| Sbjct: 42 gctacgaccgcgccatcaccgtcttctcgcccgacggccacctcttccaagtggagtacg 101 Query: 206 cg 207 || Sbjct: 102 cg 103
>ref|NM_122950.2| Arabidopsis thaliana PAA1; endopeptidase/ peptidase/ threonine endopeptidase AT5G35590 (PAA1) mRNA, complete cds Length = 1037 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 439 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 498 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 365 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 424 Query: 499 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 558 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 425 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 484 Query: 559 gagaa 563 ||||| Sbjct: 485 gagaa 489 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 268 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 194 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 235
>gb|AY440091.1| Armigeres subalbatus ASAP ID: 39029 proteasome complex subunit mRNA sequence Length = 721 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 210 ||||||||||| || || ||||| |||||||| || ||||| ||||| ||||| || ||| Sbjct: 138 gaccgccacattacgattttctctccggagggtcgtctctatcaagttgagtatgccttc 197 Query: 211 aaggc 215 ||||| Sbjct: 198 aaggc 202
>gb|BC055520.1| Danio rerio cDNA clone MGC:66161 IMAGE:5600170, complete cds Length = 998 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 210 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 94 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 153 Query: 211 aaggc 215 ||||| Sbjct: 154 aaggc 158
>emb|Y13691.1|ATY13691 Arabidopsis thaliana mRNA for proteasome subunit prc1 Length = 976 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 439 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 498 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 313 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 372 Query: 499 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 558 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 373 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 432 Query: 559 gagaa 563 ||||| Sbjct: 433 gagaa 437 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 268 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 142 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 183
>gb|AY114564.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha subunit-like (At5g35590) mRNA, complete cds Length = 777 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 439 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 498 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 316 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 375 Query: 499 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 558 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 376 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 435 Query: 559 gagaa 563 ||||| Sbjct: 436 gagaa 440
>gb|AY092969.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha subunit-like (At5g35590) mRNA, complete cds Length = 1008 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 439 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 498 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 365 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtctac 424 Query: 499 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 558 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 425 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 484 Query: 559 gagaa 563 ||||| Sbjct: 485 gagaa 489
>gb|AF354750.1|AF354750 Danio rerio proteasome subunit alpha Type 6-A (psma6a) mRNA, complete cds Length = 896 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 210 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 28 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 87 Query: 211 aaggc 215 ||||| Sbjct: 88 aaggc 92
>ref|NM_153655.1| Danio rerio proteasome (prosome, macropain) subunit, alpha type, 6a (psma6a), mRNA Length = 896 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttc 210 ||||| |||||||||||||| || |||||||| | ||||| |||||||| || || ||| Sbjct: 28 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcgaatatgctttc 87 Query: 211 aaggc 215 ||||| Sbjct: 88 aaggc 92
>gb|AF043518.1|AF043518 Arabidopsis thaliana 20S proteasome subunit PAA1 (PAA1) mRNA, complete cds Length = 1029 Score = 50.1 bits (25), Expect = 0.008 Identities = 100/125 (80%) Strand = Plus / Plus Query: 439 ggatatgagatgcctgtggatgtattagcaaaatggattgcagacaaagcacaaatatac 498 ||||||||||||||||| || | | || |||||||| || ||||| |||| | ||| Sbjct: 370 ggatatgagatgcctgttgacattcttgctaaatggatagcggacaagtcacaggtttac 429 Query: 499 acgcagcatgcatacatgagaccccttggtgtagttgctatggtcctgggttatgatgag 558 || || ||||| ||||||||||||||||| || || |||||||| ||||| |||||| Sbjct: 430 actcaacatgcttacatgagaccccttggagttgtcgctatggtaatgggtgttgatgaa 489 Query: 559 gagaa 563 ||||| Sbjct: 490 gagaa 494 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 268 tgcgtcgtcacccagaagaaagtcccggacaagttgttggat 309 |||||||| |||||||||||||| || |||||| | |||||| Sbjct: 199 tgcgtcgttacccagaagaaagttcctgacaagcttttggat 240
>emb|BX067162.1|CNS09NZI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50CH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 905 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 865 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 806 Query: 200 agtacgcgttcaaggc 215 |||| || |||||||| Sbjct: 805 agtatgccttcaaggc 790
>emb|BX052051.1|CNS09CBR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC29DH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 767 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 739 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 680 Query: 200 agtacgcgttcaaggc 215 |||| || |||||||| Sbjct: 679 agtatgccttcaaggc 664
>emb|BX046179.1|CNS097SN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC2CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 929 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 864 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 805 Query: 200 agtacgcgttcaaggc 215 |||| || |||||||| Sbjct: 804 agtatgccttcaaggc 789
>emb|BX043736.1|CNS095WS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC16CB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 927 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 809 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 750 Query: 200 agtacgcgttcaaggc 215 |||| || |||||||| Sbjct: 749 agtatgccttcaaggc 734
>emb|BX032519.1|CNS08X97 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48BG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 868 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Plus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 153 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 212 Query: 200 agtacgcgttcaaggc 215 |||| || |||||||| Sbjct: 213 agtatgccttcaaggc 228
>gb|AC084541.1|CBRG27D19 Caenorhabditis briggsae cosmid G27D19, complete sequence Length = 40961 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccgga 179 ||||||| | ||| || ||||||||||||||||||||||| Sbjct: 35517 gcgccggattcgatcgtcacatcaccatcttctccccgga 35556
>ref|XM_318387.2| Anopheles gambiae str. PEST ENSANGP00000015960 (ENSANGG00000013471), mRNA Length = 1017 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Plus Query: 140 gcgccggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 |||| |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| | Sbjct: 159 gcgcgggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttg 218 Query: 200 agtacgcgttcaaggc 215 |||| || |||||||| Sbjct: 219 agtatgccttcaaggc 234
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 160 atcaccatcttctccccggagggccgcctctaccaagtcgagtacgcg 207 |||||||||||||| ||||| || ||||| || || |||||||||||| Sbjct: 1804305 atcaccatcttctctccggacggtcgcctgtatcaggtcgagtacgcg 1804352
>ref|XM_368091.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01153.4) partial mRNA Length = 765 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 148 tacgaccgccacatcaccatcttctcc 174 |||||||| |||||||||||||||||| Sbjct: 19 tacgaccggcacatcaccatcttctcc 45
>emb|CR730790.2|CNS0GQTN Tetraodon nigroviridis full-length cDNA Length = 1232 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/50 (88%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcga 200 ||||| || |||||||| || ||||||||| |||||||||||||||||| Sbjct: 28 gaccgacatatcaccatattttccccggag--ccgcctctaccaagtcga 75
>gb|AY232148.1| Drosophila yakuba clone yak-ad_ProsMA5 mRNA sequence Length = 555 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 168 cttctccccggagggccgcctctaccaagtcgagtacgc 206 |||||| |||||||||||||||| |||||| || ||||| Sbjct: 42 cttctcgccggagggccgcctcttccaagtggaatacgc 80
>emb|BX036097.1|CNS0900L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7DB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 960 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 145 ggctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtac 204 |||| ||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 863 ggcttcgatcgccatattacaatcttttcgccggaaggccgtctctaccaagttgagtat 804 Query: 205 gcgttcaaggc 215 || |||||||| Sbjct: 803 gccttcaaggc 793
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 233 tcacctcgatcggcgtccgaggcaaggactccgtctgcgtcgtcacccagaagaaagtcc 292 |||| |||||||| |||||||| || || || || |||||||| || ||||||||||| | Sbjct: 18330 tcacatcgatcggtgtccgagggaaagattcagtatgcgtcgttacgcagaagaaagttc 18389 Query: 293 cgg 295 ||| Sbjct: 18390 cgg 18392 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 496 tacacgcagcatgcatacatgagaccccttggtgtag 532 ||||| || ||||| ||||||||||||||||| |||| Sbjct: 18813 tacacacaacatgcttacatgagaccccttggagtag 18849
>dbj|AK152915.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830091A01 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 946 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 197 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 78 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 124
>dbj|AK161662.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730455O07 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 928 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 197 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 58 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 104
>dbj|AK088143.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005A01 product:proteasome (prosome, macropain) subunit, alpha type 6, full insert sequence Length = 925 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 197 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 57 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 103
>gb|AF060087.1|AF060087 Mus musculus proteasome subunit iota (Psma6) mRNA, complete cds Length = 741 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 197 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 28 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 74
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagt 197 ||||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 53573 gaccgtcacattactatcttctctcccgagggccgactctaccaagt 53527
>ref|NM_114913.3| Arabidopsis thaliana CRK; ATP binding / calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase/ protein kinase/ protei> AT3G50530 (CRK) mRNA, complete cds Length = 2384 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 ctccggcgagatctccggcgac 115 |||||||||||||||||||||| Sbjct: 507 ctccggcgagatctccggcgac 528
>gb|DQ215433.1| Taeniopygia guttata clone 0058P0005A09 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 933 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 34 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 93 Query: 206 cg 207 || Sbjct: 94 cg 95
>gb|DQ215432.1| Taeniopygia guttata clone 0058P0015B06 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 768 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 55 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 114 Query: 206 cg 207 || Sbjct: 115 cg 116
>gb|DQ215431.1| Taeniopygia guttata clone 0058P0056A11 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 48 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 107 Query: 206 cg 207 || Sbjct: 108 cg 109
>gb|DQ215430.1| Taeniopygia guttata clone 0058P0018G09 proteasome 28 kDa subunit-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 61 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 120 Query: 206 cg 207 || Sbjct: 121 cg 122
>gb|DQ215302.1| Taeniopygia guttata clone 0058P0014F03 beta-globin mRNA-like mRNA, complete sequence Length = 616 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| ||||||| ||||| || | ||||| ||| || ||||||| Sbjct: 13 gctacgaccgcgccatcaccgtcttctcgccggacgggcacctcttccaggtggagtacg 72 Query: 206 cg 207 || Sbjct: 73 cg 74
>gb|AY562224.1| Nicotiana tabacum calcium/calmodulin protein kinase gene, complete cds Length = 24561 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 ctccggcgagatctccggcgac 115 |||||||||||||||||||||| Sbjct: 9902 ctccggcgagatctccggcgac 9923
>gb|AF550608.1| Nicotiana tabacum calcium/calmodulin protein kinase 1 mRNA, complete cds Length = 4846 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 ctccggcgagatctccggcgac 115 |||||||||||||||||||||| Sbjct: 1643 ctccggcgagatctccggcgac 1664
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 354 cttgcttgccaccggcctcaca 375 |||||||||||||||||||||| Sbjct: 223306 cttgcttgccaccggcctcaca 223327
>emb|Y09418.1|ATCRK A.thaliana mRNA for CDPK-related protein kinase Length = 2267 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 ctccggcgagatctccggcgac 115 |||||||||||||||||||||| Sbjct: 375 ctccggcgagatctccggcgac 396
>emb|X89429.1|PADNAGRIS Podospora anserina grisea gene, wild-type and copy of a long-lived mutant Length = 3417 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 caccagcatcacgcacctcttc 333 |||||||||||||||||||||| Sbjct: 1706 caccagcatcacgcacctcttc 1727
>emb|AL133363.1|ATT20E23 Arabidopsis thaliana DNA chromosome 3, BAC clone T20E23 Length = 83513 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 ctccggcgagatctccggcgac 115 |||||||||||||||||||||| Sbjct: 44004 ctccggcgagatctccggcgac 44025
>gb|DQ397847.1| Cenarchaeum symbiosum clone C07F03, complete sequence Length = 42905 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 ccccggagggccgcctctacca 194 |||||||||||||||||||||| Sbjct: 20858 ccccggagggccgcctctacca 20879
>ref|NM_166221.2| Drosophila melanogaster Proteasome subunit CG10938-RA, transcript variant A (ProsMA5), mRNA Length = 884 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 cttctccccggagggccgcctctaccaagt 197 |||||| |||||||||||||||| |||||| Sbjct: 118 cttctcgccggagggccgcctcttccaagt 147
>ref|NM_057854.3| Drosophila melanogaster Proteasome subunit CG10938-RB, transcript variant B (ProsMA5), mRNA Length = 885 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 cttctccccggagggccgcctctaccaagt 197 |||||| |||||||||||||||| |||||| Sbjct: 114 cttctcgccggagggccgcctcttccaagt 143
>gb|AF435446.1|AF435446 Arabidopsis thaliana calcium/calmodulin-dependent protein kinase CaMK1 mRNA, complete cds Length = 2271 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 ctccggcgagatctccggcgac 115 |||||||||||||||||||||| Sbjct: 440 ctccggcgagatctccggcgac 461
>gb|AY061404.1| Drosophila melanogaster LD33318 full length cDNA Length = 888 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 cttctccccggagggccgcctctaccaagt 197 |||||| |||||||||||||||| |||||| Sbjct: 109 cttctcgccggagggccgcctcttccaagt 138
>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone BACR28O12, complete sequence Length = 161244 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 cttctccccggagggccgcctctaccaagt 197 |||||| |||||||||||||||| |||||| Sbjct: 127442 cttctcgccggagggccgcctcttccaagt 127471
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 cttctccccggagggccgcctctaccaagt 197 |||||| |||||||||||||||| |||||| Sbjct: 4443 cttctcgccggagggccgcctcttccaagt 4472
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 cttctccccggagggccgcctctaccaagt 197 |||||| |||||||||||||||| |||||| Sbjct: 147460 cttctcgccggagggccgcctcttccaagt 147489
>gb|U64721.1|DMU64721 Drosophila melanogaster 20S proteasome alpha subunit PSMA5 gene, complete cds Length = 1062 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 168 cttctccccggagggccgcctctaccaagt 197 |||||| |||||||||||||||| |||||| Sbjct: 187 cttctcgccggagggccgcctcttccaagt 216
>gb|BC061438.1| Xenopus tropicalis proteasome (prosome, macropain) subunit, alpha type 6, mRNA (cDNA clone MGC:76321 IMAGE:5380309), complete cds Length = 929 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 216 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 54 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 113 Query: 217 gtcaa 221 |||| Sbjct: 114 atcaa 118
>emb|Z73908.1|CEF53B2 Caenorhabditis elegans Cosmid F53B2, complete sequence Length = 33478 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 attgcagacaaagcacaaata 495 ||||||||||||||||||||| Sbjct: 18174 attgcagacaaagcacaaata 18194
>emb|BX649530.13| Zebrafish DNA sequence from clone DKEYP-33B5 in linkage group 17, complete sequence Length = 150656 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 151 gaccgccacatcaccatcttctccccggagggccgcctctaccaagtcg 199 ||||| |||||||||||||| || |||||||| | ||||| ||||||| Sbjct: 42431 gaccgacacatcaccatcttttctccggaggggagactctatcaagtcg 42479
>ref|NM_069999.2| Caenorhabditis elegans F53B2.5 (F53B2.5) mRNA, complete cds Length = 1347 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 attgcagacaaagcacaaata 495 ||||||||||||||||||||| Sbjct: 536 attgcagacaaagcacaaata 516
>ref|NM_203782.1| Xenopus tropicalis proteasome (prosome, macropain) subunit, alpha type 6 (MGC76321), mRNA Length = 929 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 216 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 54 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 113 Query: 217 gtcaa 221 |||| Sbjct: 114 atcaa 118
>gb|AY103887.1| Zea mays PCO095017 mRNA sequence Length = 1119 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Plus Query: 146 gctacgaccgccacatcaccatcttctccccggagggccgcctctaccaagtcgagtacg 205 ||||||||||| ||||||| | |||||||| || |||| ||||| ||| || ||||||| Sbjct: 119 gctacgaccgcgccatcaccgttttctcccccgacggccacctcttccaggtggagtacg 178 Query: 206 c 206 | Sbjct: 179 c 179
>emb|CR761245.2| Xenopus tropicalis finished cDNA, clone TEgg062p03 Length = 897 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 157 cacatcaccatcttctccccggagggccgcctctaccaagtcgagtacgcgttcaaggcg 216 ||||| ||||||||||| || || || || ||||| |||||||| || || ||||||||| Sbjct: 47 cacattaccatcttctcacccgaagggcgtctctatcaagtcgaatatgcattcaaggcg 106 Query: 217 gtcaa 221 |||| Sbjct: 107 atcaa 111
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tgtagttgctatggtcctgg 547 |||||||||||||||||||| Sbjct: 70434 tgtagttgctatggtcctgg 70415
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete sequence Length = 185717 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 agacaaagcacaaatataca 499 |||||||||||||||||||| Sbjct: 77154 agacaaagcacaaatataca 77135
>emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chromosome 1q32.1-32.3 Contains the 3' end of the CR1 gene for complement component (3b/4b) receptor 1, including Knops blood group system, a membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP) pseudogene and the 5' end of the CR1L gene for complement component (3b/4b) receptor 1-like, complete sequence Length = 145325 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 agacaaagcacaaatataca 499 |||||||||||||||||||| Sbjct: 4663 agacaaagcacaaatataca 4644
>emb|BX072128.1|CNS09RTG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC9DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 955 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 184 cgcctctaccaagtcgagtacgcgttcaaggc 215 |||||||||||||| ||||| || |||||||| Sbjct: 188 cgcctctaccaagttgagtatgccttcaaggc 219
>emb|Z72548.1|SCYGL026C S.cerevisiae chromosome VII reading frame ORF YGL026c Length = 2620 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 tggtctcccaagcaagaaatgaag 415 ||||||||||||| |||||||||| Sbjct: 2139 tggtctcccaagctagaaatgaag 2116
>emb|V01343.1|SCTRP5B Part of the yeast gene for tryptophan synthetase. A copy of the insertion element IS2 is inserted after cloning in E.coli by duplicating a 5 base pair sequence. This is the wildtype TRP5 gene before insertion of IS2 Length = 798 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 tggtctcccaagcaagaaatgaag 415 ||||||||||||| |||||||||| Sbjct: 534 tggtctcccaagctagaaatgaag 557
>emb|V01342.1|SCTRP5A Yeast gene (trp5) for tryptophan synthetase Length = 2992 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 tggtctcccaagcaagaaatgaag 415 ||||||||||||| |||||||||| Sbjct: 752 tggtctcccaagctagaaatgaag 775
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 144 cggctacgaccgccacatcaccatcttc 171 |||||||| |||| |||||||||||||| Sbjct: 142355 cggctacgcccgctacatcaccatcttc 142328
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gccacatcaccatcttctcc 174 |||||||||||||||||||| Sbjct: 5473678 gccacatcaccatcttctcc 5473659
>gb|AC017088.8| Homo sapiens BAC clone RP11-496P1 from 2, complete sequence Length = 200440 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 caccacccaggcccagctcc 97 |||||||||||||||||||| Sbjct: 87687 caccacccaggcccagctcc 87668
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence Length = 184453 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 tgtagttgctatggtcctgg 547 |||||||||||||||||||| Sbjct: 24165 tgtagttgctatggtcctgg 24184
>dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2K18 Length = 41465 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 496 tacacgcagcatgcatacatgagaccccttgg 527 ||||| || ||||| ||||||||||||||||| Sbjct: 18295 tacactcaacatgcttacatgagaccccttgg 18264
>gb|DQ331977.1| Synthetic construct Saccharomyces cerevisiae clone FLH202464.01X TRP5 gene, complete sequence Length = 2124 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 tggtctcccaagcaagaaatgaag 415 ||||||||||||| |||||||||| Sbjct: 254 tggtctcccaagctagaaatgaag 277
>gb|U27311.1|SAU27311 Stigmatella aurantiaca RNA polymerase sigma C subunit (sigC) gene, complete cds Length = 1253 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gcaccacccaggcccagctccggc 100 |||||||||||||||||| ||||| Sbjct: 455 gcaccacccaggcccagcgccggc 478
>gb|J02562.1|SYNTRIS22 yeast (s.cerevisiae) trp5 gene and chimeric is2 element: 3'end Length = 709 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 tggtctcccaagcaagaaatgaag 415 ||||||||||||| |||||||||| Sbjct: 445 tggtctcccaagctagaaatgaag 468 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,981,389 Number of Sequences: 3902068 Number of extensions: 3981389 Number of successful extensions: 82756 Number of sequences better than 10.0: 173 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 82263 Number of HSP's gapped (non-prelim): 492 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
