Clone Name | bart24c02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GGLO_SCYTO (Q90YK3) L-gulonolactone oxidase (EC 1.1.3.8) (LGO) (... | 31 | 2.0 | 2 | YCJR_ECOLI (P76044) Hypothetical protein ycjR | 29 | 7.8 |
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>GGLO_SCYTO (Q90YK3) L-gulonolactone oxidase (EC 1.1.3.8) (LGO)| (L-gulono-gamma-lactone oxidase) (GLO) Length = 440 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +3 Query: 351 HSFTKLACPGGRDGTIISTERLNKTVSVDAAKGLMTVESGMVLKDL 488 HS + +AC D ++ +LN+ + VD + +T E+G++L DL Sbjct: 54 HSPSDIACT---DNYLVRLNKLNRILQVDKERKWITAEAGILLSDL 96
>YCJR_ECOLI (P76044) Hypothetical protein ycjR| Length = 265 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = -1 Query: 476 HHAALHRHQP-LGSIDAHRLVEPLRADD 396 H A HR+QP G++D H L E LRAD+ Sbjct: 208 HIADNHRYQPGSGTLDFHALFEQLRADN 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,792,046 Number of Sequences: 219361 Number of extensions: 933475 Number of successful extensions: 3216 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3214 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)