ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart24c02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479769.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2059 Score = 178 bits (90), Expect = 1e-41 Identities = 183/214 (85%) Strand = Plus / Plus Query: 193 ccgactgcaccgtcaccaacgtgtacggctccttcccggaccgcaccatctgccgcgcgg 252 |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 149 ccgactgcacggtgaccaacgtgtacggctccttccccgaccgcaccatctgccgcgccg 208 Query: 253 ccaacgccacgttcccccgcaccgagaaggagctcgtggccgccgtggctgccgccgccg 312 || |||| ||||||| ||||| ||| |||||||||||| |||||||| || || || | Sbjct: 209 ccgacgcgtcgttcccgcgcacggaggcggagctcgtggcggccgtggcggcggcggcgg 268 Query: 313 cgtccaaacgcaaggttaaggtggccaccaggcactcccacagcttcaccaagctggcct 372 || | || |||| |||| ||| || |||||||||||||||||| |||||||||| | Sbjct: 269 cggcggggcggaaggcgaaggcggcgacgaggcactcccacagcttccccaagctggcgt 328 Query: 373 gccccgggggccgcgacggcacgatcatcagcac 406 ||||||| |||||||||||||| ||||||||||| Sbjct: 329 gccccggcggccgcgacggcaccatcatcagcac 362 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 498 gccgccgcggcggggctcgcgctgccgcactcgccctactggtacggactcacc 551 |||||||| || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 454 gccgccgccgccggcctcgcgctgccgcactcgccctactggtacggcctcacc 507
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 178 bits (90), Expect = 1e-41 Identities = 183/214 (85%) Strand = Plus / Minus Query: 193 ccgactgcaccgtcaccaacgtgtacggctccttcccggaccgcaccatctgccgcgcgg 252 |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 764314 ccgactgcacggtgaccaacgtgtacggctccttccccgaccgcaccatctgccgcgccg 764255 Query: 253 ccaacgccacgttcccccgcaccgagaaggagctcgtggccgccgtggctgccgccgccg 312 || |||| ||||||| ||||| ||| |||||||||||| |||||||| || || || | Sbjct: 764254 ccgacgcgtcgttcccgcgcacggaggcggagctcgtggcggccgtggcggcggcggcgg 764195 Query: 313 cgtccaaacgcaaggttaaggtggccaccaggcactcccacagcttcaccaagctggcct 372 || | || |||| |||| ||| || |||||||||||||||||| |||||||||| | Sbjct: 764194 cggcggggcggaaggcgaaggcggcgacgaggcactcccacagcttccccaagctggcgt 764135 Query: 373 gccccgggggccgcgacggcacgatcatcagcac 406 ||||||| |||||||||||||| ||||||||||| Sbjct: 764134 gccccggcggccgcgacggcaccatcatcagcac 764101 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 498 gccgccgcggcggggctcgcgctgccgcactcgccctactggtacggactcacc 551 |||||||| || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 764009 gccgccgccgccggcctcgcgctgccgcactcgccctactggtacggcctcacc 763956
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 178 bits (90), Expect = 1e-41 Identities = 183/214 (85%) Strand = Plus / Minus Query: 193 ccgactgcaccgtcaccaacgtgtacggctccttcccggaccgcaccatctgccgcgcgg 252 |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 63534 ccgactgcacggtgaccaacgtgtacggctccttccccgaccgcaccatctgccgcgccg 63475 Query: 253 ccaacgccacgttcccccgcaccgagaaggagctcgtggccgccgtggctgccgccgccg 312 || |||| ||||||| ||||| ||| |||||||||||| |||||||| || || || | Sbjct: 63474 ccgacgcgtcgttcccgcgcacggaggcggagctcgtggcggccgtggcggcggcggcgg 63415 Query: 313 cgtccaaacgcaaggttaaggtggccaccaggcactcccacagcttcaccaagctggcct 372 || | || |||| |||| ||| || |||||||||||||||||| |||||||||| | Sbjct: 63414 cggcggggcggaaggcgaaggcggcgacgaggcactcccacagcttccccaagctggcgt 63355 Query: 373 gccccgggggccgcgacggcacgatcatcagcac 406 ||||||| |||||||||||||| ||||||||||| Sbjct: 63354 gccccggcggccgcgacggcaccatcatcagcac 63321 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 498 gccgccgcggcggggctcgcgctgccgcactcgccctactggtacggactcacc 551 |||||||| || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 63229 gccgccgccgccggcctcgcgctgccgcactcgccctactggtacggcctcacc 63176
>dbj|AK105866.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A07, full insert sequence Length = 2059 Score = 178 bits (90), Expect = 1e-41 Identities = 183/214 (85%) Strand = Plus / Plus Query: 193 ccgactgcaccgtcaccaacgtgtacggctccttcccggaccgcaccatctgccgcgcgg 252 |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 149 ccgactgcacggtgaccaacgtgtacggctccttccccgaccgcaccatctgccgcgccg 208 Query: 253 ccaacgccacgttcccccgcaccgagaaggagctcgtggccgccgtggctgccgccgccg 312 || |||| ||||||| ||||| ||| |||||||||||| |||||||| || || || | Sbjct: 209 ccgacgcgtcgttcccgcgcacggaggcggagctcgtggcggccgtggcggcggcggcgg 268 Query: 313 cgtccaaacgcaaggttaaggtggccaccaggcactcccacagcttcaccaagctggcct 372 || | || |||| |||| ||| || |||||||||||||||||| |||||||||| | Sbjct: 269 cggcggggcggaaggcgaaggcggcgacgaggcactcccacagcttccccaagctggcgt 328 Query: 373 gccccgggggccgcgacggcacgatcatcagcac 406 ||||||| |||||||||||||| ||||||||||| Sbjct: 329 gccccggcggccgcgacggcaccatcatcagcac 362 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 498 gccgccgcggcggggctcgcgctgccgcactcgccctactggtacggactcacc 551 |||||||| || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 454 gccgccgccgccggcctcgcgctgccgcactcgccctactggtacggcctcacc 507
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 176 bits (89), Expect = 5e-41 Identities = 268/328 (81%), Gaps = 6/328 (1%) Strand = Plus / Plus Query: 218 cggctccttcccggaccgcaccatctgccgcgcggccaacgccacgttcccccgcaccga 277 ||||||||||||||||||||||||||||||||| || | |||| | ||| ||||| || Sbjct: 64598 cggctccttcccggaccgcaccatctgccgcgcagcgaccgccgtctacccgcgcacgga 64657 Query: 278 gaaggagctcgtggccgccgtggctgccgccgccgcgtccaaacgcaaggttaaggtggc 337 | ||||||||| || |||||||| || || |||||| |||| || ||||| |||||||| Sbjct: 64658 ggcggagctcgtcgcggccgtggcggcggcggccgcggccaagcggaaggtgaaggtggc 64717 Query: 338 caccaggcactcccacagcttcaccaagctggcctgccc------cgggggccgcgacgg 391 ||| |||||||||||||||||| ||||| || ||||| ||| ||| ||||||| Sbjct: 64718 cacggcgcactcccacagcttcacgaagctcgcgtgccccggcgacggcggcggcgacgg 64777 Query: 392 cacgatcatcagcacggagcggctcaacaagacggtgagcgtcgatgctgccaaggggct 451 ||| ||||||||||| |||||||| ||||||| ||||||| | | | | |||| Sbjct: 64778 caccgtcatcagcacgcgatggctcaaccggacggtgcgcgtcgacgtcggccggcggct 64837 Query: 452 gatgacggtggagagcggcatggtgctcaaggacctgatccaggcggccgccgcggcggg 511 ||||||||||||||||||||||||||| |||||| || ||| ||||||||||| || Sbjct: 64838 cctgacggtggagagcggcatggtgctcagggacctcgtcgaggatgccgccgcggccgg 64897 Query: 512 gctcgcgctgccgcactcgccctactgg 539 ||||||||||||||||||||| |||||| Sbjct: 64898 gctcgcgctgccgcactcgccgtactgg 64925
>ref|XM_472087.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1773 Score = 161 bits (81), Expect = 3e-36 Identities = 264/325 (81%) Strand = Plus / Plus Query: 216 tacggctccttcccggaccgcaccatctgccgcgcggccaacgccacgttcccccgcacc 275 |||||||||||| | |||||| ||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 160 tacggctccttctccgaccgcgccatctgccgcgccgccaacgtcacgtacccgcgcacc 219 Query: 276 gagaaggagctcgtggccgccgtggctgccgccgccgcgtccaaacgcaaggttaaggtg 335 ||| |||||||||| || |||||||| || || | ||| | || ||||| ||||| Sbjct: 220 gaggaggagctcgtcgcggccgtggcggcggcggtggcggcggggcggaaggtgaaggtc 279 Query: 336 gccaccaggcactcccacagcttcaccaagctggcctgccccgggggccgcgacggcacg 395 ||||||||| ||||| |||||||| | |||||| |||||||| ||| |||||||| Sbjct: 280 gccaccaggtactccaacagcttcccgcggctggcgtgccccggcggcgaggacggcacc 339 Query: 396 atcatcagcacggagcggctcaacaagacggtgagcgtcgatgctgccaaggggctgatg 455 ||||||||||| | |||| || ||||| ||||||| || || | |||||||| Sbjct: 340 gtcatcagcacgcggtggctggaccgcgcggtgcgcgtcgacgcggcgcggcggctgatg 399 Query: 456 acggtggagagcggcatggtgctcaaggacctgatccaggcggccgccgcggcggggctc 515 ||||||||||||||||||||| | ||||||||| || ||||||||||||||||||| Sbjct: 400 acggtggagagcggcatggtgatgcgtgacctgatcagggaggccgccgcggcggggctc 459 Query: 516 gcgctgccgcactcgccctactggt 540 ||||||||||||||||| ||||||| Sbjct: 460 gcgctgccgcactcgccgtactggt 484
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 161 bits (81), Expect = 3e-36 Identities = 264/325 (81%) Strand = Plus / Plus Query: 216 tacggctccttcccggaccgcaccatctgccgcgcggccaacgccacgttcccccgcacc 275 |||||||||||| | |||||| ||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 17329524 tacggctccttctccgaccgcgccatctgccgcgccgccaacgtcacgtacccgcgcacc 17329583 Query: 276 gagaaggagctcgtggccgccgtggctgccgccgccgcgtccaaacgcaaggttaaggtg 335 ||| |||||||||| || |||||||| || || | ||| | || ||||| ||||| Sbjct: 17329584 gaggaggagctcgtcgcggccgtggcggcggcggtggcggcggggcggaaggtgaaggtc 17329643 Query: 336 gccaccaggcactcccacagcttcaccaagctggcctgccccgggggccgcgacggcacg 395 ||||||||| ||||| |||||||| | |||||| |||||||| ||| |||||||| Sbjct: 17329644 gccaccaggtactccaacagcttcccgcggctggcgtgccccggcggcgaggacggcacc 17329703 Query: 396 atcatcagcacggagcggctcaacaagacggtgagcgtcgatgctgccaaggggctgatg 455 ||||||||||| | |||| || ||||| ||||||| || || | |||||||| Sbjct: 17329704 gtcatcagcacgcggtggctggaccgcgcggtgcgcgtcgacgcggcgcggcggctgatg 17329763 Query: 456 acggtggagagcggcatggtgctcaaggacctgatccaggcggccgccgcggcggggctc 515 ||||||||||||||||||||| | ||||||||| || ||||||||||||||||||| Sbjct: 17329764 acggtggagagcggcatggtgatgcgtgacctgatcagggaggccgccgcggcggggctc 17329823 Query: 516 gcgctgccgcactcgccctactggt 540 ||||||||||||||||| ||||||| Sbjct: 17329824 gcgctgccgcactcgccgtactggt 17329848 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 423 acggtgagcgtcgatgctgccaaggggctgatgacggtggagagcggcatggtgctcaag 482 |||||| ||||||| || || | | ||||||||||||||||| ||||||||||||| Sbjct: 17272824 acggtgcgcgtcgacgcggcgaggcggctgatgacggtggagggcggcatggtgctgcgt 17272765 Query: 483 gacctgatccaggcggccgccgcggcggggctcgcgctgccgcactcgccctactggt 540 |||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 17272764 gacctgattagggaggccgccgcggcggggctcgcgctgccgcactcgccgtactggt 17272707 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 197 ctgcaccgtcaccaacgtgtacggctccttcccggaccgcaccatctgccgcgcggccaa 256 |||||| ||||| ||| | |||||||||||||| |||||| || ||||||||||||| Sbjct: 17273059 ctgcacggtcacgaacatctacggctccttccccgaccgcgccgcctgccgcgcggccgg 17273000 Query: 257 cgccacgttcccccgcaccgagaaggagctcgtggccgccgtggc 301 || | ||| ||| ||||||||| ||||||||||||| |||||||| Sbjct: 17272999 cgtcgcgtacccgcgcaccgaggaggagctcgtggcggccgtggc 17272955
>emb|AL662967.2|OSJN00166 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0034E24, complete sequence Length = 152220 Score = 161 bits (81), Expect = 3e-36 Identities = 264/325 (81%) Strand = Plus / Plus Query: 216 tacggctccttcccggaccgcaccatctgccgcgcggccaacgccacgttcccccgcacc 275 |||||||||||| | |||||| ||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 129748 tacggctccttctccgaccgcgccatctgccgcgccgccaacgtcacgtacccgcgcacc 129807 Query: 276 gagaaggagctcgtggccgccgtggctgccgccgccgcgtccaaacgcaaggttaaggtg 335 ||| |||||||||| || |||||||| || || | ||| | || ||||| ||||| Sbjct: 129808 gaggaggagctcgtcgcggccgtggcggcggcggtggcggcggggcggaaggtgaaggtc 129867 Query: 336 gccaccaggcactcccacagcttcaccaagctggcctgccccgggggccgcgacggcacg 395 ||||||||| ||||| |||||||| | |||||| |||||||| ||| |||||||| Sbjct: 129868 gccaccaggtactccaacagcttcccgcggctggcgtgccccggcggcgaggacggcacc 129927 Query: 396 atcatcagcacggagcggctcaacaagacggtgagcgtcgatgctgccaaggggctgatg 455 ||||||||||| | |||| || ||||| ||||||| || || | |||||||| Sbjct: 129928 gtcatcagcacgcggtggctggaccgcgcggtgcgcgtcgacgcggcgcggcggctgatg 129987 Query: 456 acggtggagagcggcatggtgctcaaggacctgatccaggcggccgccgcggcggggctc 515 ||||||||||||||||||||| | ||||||||| || ||||||||||||||||||| Sbjct: 129988 acggtggagagcggcatggtgatgcgtgacctgatcagggaggccgccgcggcggggctc 130047 Query: 516 gcgctgccgcactcgccctactggt 540 ||||||||||||||||| ||||||| Sbjct: 130048 gcgctgccgcactcgccgtactggt 130072 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 423 acggtgagcgtcgatgctgccaaggggctgatgacggtggagagcggcatggtgctcaag 482 |||||| ||||||| || || | | ||||||||||||||||| ||||||||||||| Sbjct: 73048 acggtgcgcgtcgacgcggcgaggcggctgatgacggtggagggcggcatggtgctgcgt 72989 Query: 483 gacctgatccaggcggccgccgcggcggggctcgcgctgccgcactcgccctactggt 540 |||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 72988 gacctgattagggaggccgccgcggcggggctcgcgctgccgcactcgccgtactggt 72931 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 197 ctgcaccgtcaccaacgtgtacggctccttcccggaccgcaccatctgccgcgcggccaa 256 |||||| ||||| ||| | |||||||||||||| |||||| || ||||||||||||| Sbjct: 73283 ctgcacggtcacgaacatctacggctccttccccgaccgcgccgcctgccgcgcggccgg 73224 Query: 257 cgccacgttcccccgcaccgagaaggagctcgtggccgccgtggc 301 || | ||| ||| ||||||||| ||||||||||||| |||||||| Sbjct: 73223 cgtcgcgtacccgcgcaccgaggaggagctcgtggcggccgtggc 73179
>ref|XM_472075.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1989 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 423 acggtgagcgtcgatgctgccaaggggctgatgacggtggagagcggcatggtgctcaag 482 |||||| ||||||| || || | | ||||||||||||||||| ||||||||||||| Sbjct: 478 acggtgcgcgtcgacgcggcgaggcggctgatgacggtggagggcggcatggtgctgcgt 537 Query: 483 gacctgatccaggcggccgccgcggcggggctcgcgctgccgcactcgccctactggt 540 |||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 538 gacctgattagggaggccgccgcggcggggctcgcgctgccgcactcgccgtactggt 595 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 197 ctgcaccgtcaccaacgtgtacggctccttcccggaccgcaccatctgccgcgcggccaa 256 |||||| ||||| ||| | |||||||||||||| |||||| || ||||||||||||| Sbjct: 243 ctgcacggtcacgaacatctacggctccttccccgaccgcgccgcctgccgcgcggccgg 302 Query: 257 cgccacgttcccccgcaccgagaaggagctcgtggccgccgtggc 301 || | ||| ||| ||||||||| ||||||||||||| |||||||| Sbjct: 303 cgtcgcgtacccgcgcaccgaggaggagctcgtggcggccgtggc 347
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 5e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 151 ccagcccgccgccggagccggtggagtgcgcccgcggcacgtccgactgcaccgtcacca 210 ||||||||||||||| |||||| |||||| |||||| || |||||||||| |||| Sbjct: 1265906 ccagcccgccgccggggccggtcaggtgcgcgtcgggcacggccaactgcaccgtgacca 1265847 Query: 211 acgtgtacggctccttcccggaccgcaccatctgccgcgc 250 ||| ||||||| | |||||||||||| ||| |||||||| Sbjct: 1265846 acgcgtacggcgcgttcccggaccgctccacgtgccgcgc 1265807 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 513 ctcgcgctgccgcactcgccctactgg 539 |||||||||||||||||||| |||||| Sbjct: 1275093 ctcgcgctgccgcactcgccgtactgg 1275067 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 513 ctcgcgctgccgcactcgccctactgg 539 |||||||||||||||||||| |||||| Sbjct: 1265532 ctcgcgctgccgcactcgccgtactgg 1265506 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gccgccgtggctgccgccgccgcg 314 |||||| ||||||||||||||||| Sbjct: 28708071 gccgccatggctgccgccgccgcg 28708094 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 ggcggccgccgcggcggggc 513 |||||||||||||||||||| Sbjct: 18646819 ggcggccgccgcggcggggc 18646800 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aggcggccgccgcggcgggg 512 |||||||||||||||||||| Sbjct: 13300766 aggcggccgccgcggcgggg 13300747
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 63.9 bits (32), Expect = 5e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 151 ccagcccgccgccggagccggtggagtgcgcccgcggcacgtccgactgcaccgtcacca 210 ||||||||||||||| |||||| |||||| |||||| || |||||||||| |||| Sbjct: 96997 ccagcccgccgccggggccggtcaggtgcgcgtcgggcacggccaactgcaccgtgacca 96938 Query: 211 acgtgtacggctccttcccggaccgcaccatctgccgcgc 250 ||| ||||||| | |||||||||||| ||| |||||||| Sbjct: 96937 acgcgtacggcgcgttcccggaccgctccacgtgccgcgc 96898 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 513 ctcgcgctgccgcactcgccctactgg 539 |||||||||||||||||||| |||||| Sbjct: 106184 ctcgcgctgccgcactcgccgtactgg 106158 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 513 ctcgcgctgccgcactcgccctactgg 539 |||||||||||||||||||| |||||| Sbjct: 96623 ctcgcgctgccgcactcgccgtactgg 96597
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 63.9 bits (32), Expect = 5e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 151 ccagcccgccgccggagccggtggagtgcgcccgcggcacgtccgactgcaccgtcacca 210 ||||||||||||||| |||||| |||||| |||||| || |||||||||| |||| Sbjct: 39935 ccagcccgccgccggggccggtcaggtgcgcgtcgggcacggccaactgcaccgtgacca 39876 Query: 211 acgtgtacggctccttcccggaccgcaccatctgccgcgc 250 ||| ||||||| | |||||||||||| ||| |||||||| Sbjct: 39875 acgcgtacggcgcgttcccggaccgctccacgtgccgcgc 39836 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 513 ctcgcgctgccgcactcgccctactgg 539 |||||||||||||||||||| |||||| Sbjct: 49122 ctcgcgctgccgcactcgccgtactgg 49096 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 513 ctcgcgctgccgcactcgccctactgg 539 |||||||||||||||||||| |||||| Sbjct: 39561 ctcgcgctgccgcactcgccgtactgg 39535
>ref|XM_462935.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1794 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 330 aaggtggccaccaggcactcccacagcttcaccaagctggcctgccccgggggccgcgac 389 ||||||||||||||| ||||||||||| || | |||||||||||||||| | | ||||| Sbjct: 268 aaggtggccaccaggtactcccacagcatcccgcagctggcctgccccggcgacggcgac 327 Query: 390 ggc 392 ||| Sbjct: 328 ggc 330 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 184 gcggcacgtccgactgcaccgtcaccaacgtgtacggctccttcccggaccg 235 |||||||| ||||||||||||| | | || ||||||| |||||||||||| Sbjct: 122 gcggcacggccgactgcaccgtgtcgagcgcgtacggcgtcttcccggaccg 173
>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11 map R606A, complete sequence Length = 163580 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 330 aaggtggccaccaggcactcccacagcttcaccaagctggcctgccccgggggccgcgac 389 ||||||||||||||| ||||||||||| || | |||||||||||||||| | | ||||| Sbjct: 83885 aaggtggccaccaggtactcccacagcatcccgcagctggcctgccccggcgacggcgac 83826 Query: 390 ggc 392 ||| Sbjct: 83825 ggc 83823 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 184 gcggcacgtccgactgcaccgtcaccaacgtgtacggctccttcccggaccg 235 |||||||| ||||||||||||| | | || ||||||| |||||||||||| Sbjct: 84031 gcggcacggccgactgcaccgtgtcgagcgcgtacggcgtcttcccggaccg 83980
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 330 aaggtggccaccaggcactcccacagcttcaccaagctggcctgccccgggggccgcgac 389 ||||||||||||||| ||||||||||| || | |||||||||||||||| | | ||||| Sbjct: 20048128 aaggtggccaccaggtactcccacagcatcccgcagctggcctgccccggcgacggcgac 20048187 Query: 390 ggc 392 ||| Sbjct: 20048188 ggc 20048190 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 184 gcggcacgtccgactgcaccgtcaccaacgtgtacggctccttcccggaccg 235 |||||||| ||||||||||||| | | || ||||||| |||||||||||| Sbjct: 20047982 gcggcacggccgactgcaccgtgtcgagcgcgtacggcgtcttcccggaccg 20048033
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 330 aaggtggccaccaggcactcccacagcttcaccaagctggcctgccccgggggccgcgac 389 ||||||||||||||| ||||||||||| || | |||||||||||||||| | | ||||| Sbjct: 20041156 aaggtggccaccaggtactcccacagcatcccgcagctggcctgccccggcgacggcgac 20041215 Query: 390 ggc 392 ||| Sbjct: 20041216 ggc 20041218 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 184 gcggcacgtccgactgcaccgtcaccaacgtgtacggctccttcccggaccg 235 |||||||| ||||||||||||| | | || ||||||| |||||||||||| Sbjct: 20041010 gcggcacggccgactgcaccgtgtcgagcgcgtacggcgtcttcccggaccg 20041061
>dbj|AK109527.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-B07, full insert sequence Length = 1924 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 330 aaggtggccaccaggcactcccacagcttcaccaagctggcctgccccgggggccgcgac 389 ||||||||||||||| ||||||||||| || | |||||||||||||||| | | ||||| Sbjct: 296 aaggtggccaccaggtactcccacagcatcccgcagctggcctgccccggcgacggcgac 355 Query: 390 ggc 392 ||| Sbjct: 356 ggc 358 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 184 gcggcacgtccgactgcaccgtcaccaacgtgtacggctccttcccggaccg 235 |||||||| ||||||||||||| | | || ||||||| |||||||||||| Sbjct: 150 gcggcacggccgactgcaccgtgtcgagcgcgtacggcgtcttcccggaccg 201
>ref|XM_980092.1| PREDICTED: Mus musculus RIKEN cDNA 4733401L19 gene (4733401L19Rik), mRNA Length = 3159 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 292 ccgccgtggctgccgccgccgcgtcc 317 |||||||||||||||||||||||||| Sbjct: 1112 ccgccgtggctgccgccgccgcgtcc 1087
>dbj|AK081402.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130014E24 product:KERATIN, TYPE I CYTOSKELETAL 10 (CYTOKERATIN 10) (56 KDA CYTOKERATIN) (KERATIN, TYPE I CYTOSKELETAL 59 KDA) homolog [Mus musculus], full insert sequence Length = 2090 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 292 ccgccgtggctgccgccgccgcgtcc 317 |||||||||||||||||||||||||| Sbjct: 1417 ccgccgtggctgccgccgccgcgtcc 1392
>dbj|AK076508.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833432L21 product:KERATIN, TYPE I CYTOSKELETAL 10 (CYTOKERATIN 10) (56 KDA CYTOKERATIN) (KERATIN, TYPE I CYTOSKELETAL 59 KDA) homolog [Mus musculus], full insert sequence Length = 2085 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 292 ccgccgtggctgccgccgccgcgtcc 317 |||||||||||||||||||||||||| Sbjct: 1415 ccgccgtggctgccgccgccgcgtcc 1390
>emb|AL591165.17| Mouse DNA sequence from clone RP23-336D20 on chromosome 11, complete sequence Length = 123050 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 292 ccgccgtggctgccgccgccgcgtcc 317 |||||||||||||||||||||||||| Sbjct: 25874 ccgccgtggctgccgccgccgcgtcc 25899
>ref|XM_463947.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1872 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 513 ctcgcgctgccgcactcgccctactgg 539 |||||||||||||||||||| |||||| Sbjct: 491 ctcgcgctgccgcactcgccgtactgg 517
>ref|XM_520008.1| PREDICTED: Pan troglodytes plectin 1 (LOC464454), mRNA Length = 15528 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 12930 gccgccgtggctgccgccgccg 12909
>gb|AY480051.1| Homo sapiens plectin 11 mRNA, complete cds Length = 14797 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10875 gccgccgtggctgccgccgccg 10854
>gb|AY480050.1| Homo sapiens plectin 10 mRNA, complete cds Length = 14689 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10767 gccgccgtggctgccgccgccg 10746
>gb|AY480049.1| Homo sapiens plectin 8 mRNA, complete cds Length = 14675 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10753 gccgccgtggctgccgccgccg 10732
>gb|AY480048.1| Homo sapiens plectin 7 mRNA, complete cds Length = 14646 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10724 gccgccgtggctgccgccgccg 10703
>gb|AY480047.1| Homo sapiens plectin 6 mRNA, complete cds Length = 15249 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 11327 gccgccgtggctgccgccgccg 11306
>gb|AY480046.1| Homo sapiens plectin 3 mRNA, complete cds Length = 14751 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10829 gccgccgtggctgccgccgccg 10808
>gb|AY480045.1| Homo sapiens plectin 2 mRNA, complete cds Length = 14626 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10704 gccgccgtggctgccgccgccg 10683
>gb|AY480044.1| Homo sapiens plectin 1 mRNA, complete cds Length = 14755 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10833 gccgccgtggctgccgccgccg 10812
>ref|NM_000445.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 1, mRNA Length = 14755 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10833 gccgccgtggctgccgccgccg 10812
>ref|NM_201378.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 2, mRNA Length = 14626 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10704 gccgccgtggctgccgccgccg 10683
>ref|NM_201379.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 3, mRNA Length = 14751 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10829 gccgccgtggctgccgccgccg 10808
>ref|NM_201380.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 6, mRNA Length = 15249 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 11327 gccgccgtggctgccgccgccg 11306
>ref|NM_201381.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 7, mRNA Length = 14646 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10724 gccgccgtggctgccgccgccg 10703
>ref|NM_201383.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 10, mRNA Length = 14689 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10767 gccgccgtggctgccgccgccg 10746
>ref|NM_201382.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 8, mRNA Length = 14675 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10753 gccgccgtggctgccgccgccg 10732
>ref|NM_201384.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 11, mRNA Length = 14797 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10875 gccgccgtggctgccgccgccg 10854
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence Length = 215342 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 152820 gccgccgtggctgccgccgccg 152799
>emb|Z54367.1|HSPLECTIN H.sapiens gene for plectin Length = 14189 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 11157 gccgccgtggctgccgccgccg 11136
>gb|U53204.1|HSU53204 Human plectin (PLEC1) mRNA, complete cds Length = 14800 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 10878 gccgccgtggctgccgccgccg 10857
>gb|U63610.1|HSPLEC1S3 Human plectin (PLEC1) gene, exons 3-32, and complete cds Length = 22693 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 18712 gccgccgtggctgccgccgccg 18691
>gb|BC007597.1|BC007597 Homo sapiens, Similar to plectin 1, intermediate filament binding protein, 500kD, clone IMAGE:3346810, mRNA, partial cds Length = 4133 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 192 gccgccgtggctgccgccgccg 171
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 2481381 gccgccgtggctgccgccgccg 2481402
>gb|AF024601.1|AF024601 Nocardia farcinica extended spectrum beta-lactamase (far-1) gene, complete cds Length = 1545 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccg 312 |||||||||||||||||||||| Sbjct: 1052 gccgccgtggctgccgccgccg 1031
>ref|XM_450960.1| Oryza sativa (japonica cultivar-group), mRNA Length = 396 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 gccgccgtggctgccgccgccgcgt 315 ||||||||||| ||||||||||||| Sbjct: 364 gccgccgtggccgccgccgccgcgt 388
>ref|NM_197045.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0012L23.42), mRNA Length = 2643 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 cccgccgccggagccggtgga 175 ||||||||||||||||||||| Sbjct: 2419 cccgccgccggagccggtgga 2399
>ref|XM_872047.1| PREDICTED: Bos taurus similar to apolipoprotein L, 3 (predicted), transcript variant 2 (LOC512905), mRNA Length = 1297 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 gactgcaccgtcaccaacgtg 215 ||||||||||||||||||||| Sbjct: 332 gactgcaccgtcaccaacgtg 352
>ref|XM_590511.2| PREDICTED: Bos taurus similar to apolipoprotein L, 3 (predicted), transcript variant 1 (LOC512905), mRNA Length = 1397 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 gactgcaccgtcaccaacgtg 215 ||||||||||||||||||||| Sbjct: 432 gactgcaccgtcaccaacgtg 452
>ref|XM_549276.2| PREDICTED: Canis familiaris similar to mammalian retrotransposon derived 8b (LOC492155), mRNA Length = 1521 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 cgccgtggctgccgccgccgc 313 ||||||||||||||||||||| Sbjct: 1030 cgccgtggctgccgccgccgc 1050
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 ccgcggcggggctcgcgctgc 522 ||||||||||||||||||||| Sbjct: 9454 ccgcggcggggctcgcgctgc 9434
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gcaccatctgccgcgcggcca 255 ||||||||||||||||||||| Sbjct: 1543049 gcaccatctgccgcgcggcca 1543029
>ref|XM_539995.2| PREDICTED: Canis familiaris similar to dual specificity phosphatase 4 (LOC482880), mRNA Length = 2600 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 cgccgtggctgccgccgccgc 313 ||||||||||||||||||||| Sbjct: 355 cgccgtggctgccgccgccgc 335
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 cggccgccgcggcggggctcg 516 ||||||||||||||||||||| Sbjct: 152196 cggccgccgcggcggggctcg 152216
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cccgccgccggagccggtgga 175 ||||||||||||||||||||| Sbjct: 43413 cccgccgccggagccggtgga 43433
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gcaccatctgccgcgcggcca 255 ||||||||||||||||||||| Sbjct: 1922010 gcaccatctgccgcgcggcca 1921990
>gb|AE005929.1| Caulobacter crescentus CB15 section 255 of 359 of the complete genome Length = 13698 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 443 caaggggctgatgacggtggagagc 467 ||||| ||||||||||||||||||| Sbjct: 10413 caaggcgctgatgacggtggagagc 10389
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cccgccgccggagccggtgga 175 ||||||||||||||||||||| Sbjct: 17688293 cccgccgccggagccggtgga 17688313
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccgcgt 315 ||||||||||| ||||||||||||| Sbjct: 17797960 gccgccgtggccgccgccgccgcgt 17797936
>gb|AC026369.21|AC026369 Homo sapiens 12 BAC RP11-598F7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136725 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 432 gtcgatgctgccaaggggctg 452 ||||||||||||||||||||| Sbjct: 22692 gtcgatgctgccaaggggctg 22672
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccgcgt 315 ||||||||||| ||||||||||||| Sbjct: 38604 gccgccgtggccgccgccgccgcgt 38580
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccgcgt 315 ||||||||||| ||||||||||||| Sbjct: 106594 gccgccgtggccgccgccgccgcgt 106570
>dbj|AK098959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A20, full insert sequence Length = 1649 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 497 ggccgccgcggcggggctcgcgctg 521 |||||||||||| |||||||||||| Sbjct: 155 ggccgccgcggccgggctcgcgctg 131
>dbj|AK058776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B02, full insert sequence Length = 325 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 gccgccgtggctgccgccgccgcgt 315 ||||||||||| ||||||||||||| Sbjct: 112 gccgccgtggccgccgccgccgcgt 136
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gcaccatctgccgcgcggcca 255 ||||||||||||||||||||| Sbjct: 1944035 gcaccatctgccgcgcggcca 1944015
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cccgccgccggagccggtgga 175 ||||||||||||||||||||| Sbjct: 17697546 cccgccgccggagccggtgga 17697566
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 cgacggcacgatcatcagcac 406 ||||||||||||||||||||| Sbjct: 2127256 cgacggcacgatcatcagcac 2127236 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 tcgtggccgccgtggctgccgccg 309 |||||||||||||||| ||||||| Sbjct: 2195867 tcgtggccgccgtggccgccgccg 2195890
>gb|U27357.1|MTU27357 Mycobacterium tuberculosis cyclopropane mycolic acid synthase (cma1) gene, complete cds; and unknown genes Length = 5100 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gccgcgacggcacgatcatc 401 |||||||||||||||||||| Sbjct: 1702 gccgcgacggcacgatcatc 1721
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ggcggggctcgcgctgccgc 525 |||||||||||||||||||| Sbjct: 3513 ggcggggctcgcgctgccgc 3532
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ccagcccgccgccggagccg 170 |||||||||||||||||||| Sbjct: 2204589 ccagcccgccgccggagccg 2204608
>ref|XM_467293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2364 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gccgccgtggctgccgccgccgcg 314 |||||| ||||||||||||||||| Sbjct: 80 gccgccatggctgccgccgccgcg 103
>ref|XM_465308.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 aggcggccgccgcggcgggg 512 |||||||||||||||||||| Sbjct: 308 aggcggccgccgcggcgggg 327
>ref|NM_001013425.1| Canis familiaris keratin 10 (epidermolytic hyperkeratosis; keratosis palmaris et plantaris) (KRT10), mRNA Length = 1707 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ccgccgtggctgccgccgcc 311 |||||||||||||||||||| Sbjct: 1601 ccgccgtggctgccgccgcc 1582
>gb|AC153147.7| Mus musculus BAC clone RP23-205D14 from chromosome 12, complete sequence Length = 206281 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 9999 ggccgccgcggctgccgccgccgc 9976
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cgtggccgccgtggctgccgccgc 310 ||||||||||||||| |||||||| Sbjct: 546880 cgtggccgccgtggcggccgccgc 546857
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gccgcgacggcacgatcatc 401 |||||||||||||||||||| Sbjct: 3798131 gccgcgacggcacgatcatc 3798112
>gb|AY318944.1| Canis familiaris epithelial keratin 10 (Ker10) gene, complete cds Length = 4947 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ccgccgtggctgccgccgcc 311 |||||||||||||||||||| Sbjct: 3895 ccgccgtggctgccgccgcc 3876
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 caggcggccgccgcggcggg 511 |||||||||||||||||||| Sbjct: 1680226 caggcggccgccgcggcggg 1680207
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cgtggccgccgtggctgccgccgc 310 ||||||||||||||| |||||||| Sbjct: 3228215 cgtggccgccgtggcggccgccgc 3228238
>ref|NM_145836.1| Mus musculus RIKEN cDNA 6430527G18 gene (6430527G18Rik), mRNA Length = 4114 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1319 ggccgccgcggctgccgccgccgc 1342
>ref|XM_001000791.1| PREDICTED: Mus musculus hypothetical protein LOC672724 (LOC672724), mRNA Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 cggcggggctcgcgctgccgcact 528 ||||||||||||||| |||||||| Sbjct: 806 cggcggggctcgcgcagccgcact 783
>ref|XM_001001725.1| PREDICTED: Mus musculus hypothetical protein LOC668483 (LOC668483), mRNA Length = 1005 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 cggcggggctcgcgctgccgcact 528 ||||||||||||||| |||||||| Sbjct: 806 cggcggggctcgcgcagccgcact 783
>ref|XM_977351.1| PREDICTED: Mus musculus RIKEN cDNA 6430527G18 gene (6430527G18Rik), mRNA Length = 3647 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 855 ggccgccgcggctgccgccgccgc 878
>ref|XM_380547.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00371.1) partial mRNA Length = 2511 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcctggtgctcttcctcggc 140 |||||||||||||||||||| Sbjct: 449 tcctggtgctcttcctcggc 430
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgc 310 |||||||||||||||||||| Sbjct: 2393355 gccgccgtggctgccgccgc 2393336
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cccgccgccggagccggtgg 174 |||||||||||||||||||| Sbjct: 4671836 cccgccgccggagccggtgg 4671855 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 cgccgtggctgccgccgccgcgtc 316 ||||||||| |||||||||||||| Sbjct: 2969832 cgccgtggcggccgccgccgcgtc 2969855
>ref|NM_008858.1| Mus musculus protein kinase C, mu (Prkcm), mRNA Length = 3163 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 ||||||||||||||| |||||||| Sbjct: 176 ggccgccgtggctgctgccgccgc 199
>emb|Z34524.1|MMPROTKIN M.musculus (Balb/c) mRNA for serine/threonine protein kinase Length = 3163 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 ||||||||||||||| |||||||| Sbjct: 176 ggccgccgtggctgctgccgccgc 199
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gccgcgacggcacgatcatc 401 |||||||||||||||||||| Sbjct: 339593 gccgcgacggcacgatcatc 339574
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gcaccatctgccgcgcggcc 254 |||||||||||||||||||| Sbjct: 171745 gcaccatctgccgcgcggcc 171726
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 caggcggccgccgcggcggg 511 |||||||||||||||||||| Sbjct: 3015182 caggcggccgccgcggcggg 3015163
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 cgtggccgccgtggctgccgccgc 310 ||||||||||||||| |||||||| Sbjct: 2958080 cgtggccgccgtggcggccgccgc 2958103
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gccgcgacggcacgatcatc 401 |||||||||||||||||||| Sbjct: 8593 gccgcgacggcacgatcatc 8574
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggagctcgtggccgccgtgg 300 |||||||||||||||||||| Sbjct: 34426 ggagctcgtggccgccgtgg 34407
>emb|CR858167.1| Pongo pygmaeus mRNA; cDNA DKFZp469I1211 (from clone DKFZp469I1211) Length = 4742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 agctggcctgccccgggggc 383 |||||||||||||||||||| Sbjct: 4018 agctggcctgccccgggggc 3999
>gb|AF525300.1| Mus musculus polyglutamine-containing protein mRNA, complete cds Length = 4114 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1319 ggccgccgcggctgccgccgccgc 1342
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 486 ctgatccaggcggccgccgcggcg 509 |||||| ||||||||||||||||| Sbjct: 5362820 ctgatcgaggcggccgccgcggcg 5362797
>dbj|AK127203.1| Homo sapiens cDNA FLJ45268 fis, clone BRHIP2027685, moderately similar to Mus musculus calcium binding protein 1 (Cabp1) Length = 3254 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 ctcaaggacctgatccaggc 496 |||||||||||||||||||| Sbjct: 757 ctcaaggacctgatccaggc 776
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 48527 ggccgccgcggctgccgccgccgc 48504
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cctcctggtgctcttcctcg 138 |||||||||||||||||||| Sbjct: 1345591 cctcctggtgctcttcctcg 1345610
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 tcgtggccgccgtggctgccgccg 309 |||||||||||||||| ||||||| Sbjct: 3504726 tcgtggccgccgtggcggccgccg 3504749
>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence Length = 161654 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 ccgtggctgccgccgccgcg 314 |||||||||||||||||||| Sbjct: 77890 ccgtggctgccgccgccgcg 77871
>dbj|AK140441.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830019A12 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 3685 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1303 ggccgccgcggctgccgccgccgc 1326
>dbj|AK155373.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630222N16 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 3676 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1277 ggccgccgcggctgccgccgccgc 1300
>dbj|AK154383.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630025L07 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 3865 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1072 ggccgccgcggctgccgccgccgc 1095
>dbj|AK160059.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420047E09 product:similar to Brain MY039 protein homolog (Fragment) [Mus musculus], full insert sequence Length = 4070 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1274 ggccgccgcggctgccgccgccgc 1297
>dbj|AK171043.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630220L19 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 3676 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1277 ggccgccgcggctgccgccgccgc 1300
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 164525 ggccgccgcggctgccgccgccgc 164502
>dbj|AK032622.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430709M03 product:POLYGLUTAMINE-CONTAINING PROTEIN homolog [Homo sapiens], full insert sequence Length = 3610 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1326 ggccgccgcggctgccgccgccgc 1349
>dbj|AK032366.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430527G18 product:POLYGLUTAMINE-CONTAINING PROTEIN homolog [Homo sapiens], full insert sequence Length = 3726 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1327 ggccgccgcggctgccgccgccgc 1350
>dbj|AK084782.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330041L24 product:POLYGLUTAMINE-CONTAINING PROTEIN homolog [Homo sapiens], full insert sequence Length = 3732 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1329 ggccgccgcggctgccgccgccgc 1352
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 caggcggccgccgcggcggg 511 |||||||||||||||||||| Sbjct: 2163997 caggcggccgccgcggcggg 2163978
>dbj|AK082791.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330018I11 product:POLYGLUTAMINE-CONTAINING PROTEIN homolog [Homo sapiens], full insert sequence Length = 3656 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1306 ggccgccgcggctgccgccgccgc 1329
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgccgcg 314 ||||||||| |||||||||||||| Sbjct: 702421 gccgccgtgactgccgccgccgcg 702398
>gb|AF100457.1|AF100457 Myxococcus xanthus selenocysteine-specific elongation factor (selB) gene, partial cds; spdSR operon, complete sequence Length = 4807 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 tccaggcggccgccgcggcg 509 |||||||||||||||||||| Sbjct: 1563 tccaggcggccgccgcggcg 1582
>gb|AC069234.35| Homo sapiens 12 BAC RP11-173P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183354 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 ctcaaggacctgatccaggc 496 |||||||||||||||||||| Sbjct: 158464 ctcaaggacctgatccaggc 158445
>dbj|AK173282.1| Mus musculus mRNA for mKIAA1865 protein Length = 4112 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 1322 ggccgccgcggctgccgccgccgc 1345
>gb|AC152939.2| Mus musculus BAC clone RP23-312I2 from chromosome 7, complete sequence Length = 205980 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 290 ggccgccgtggctgccgccgccgcgtcc 317 ||||||||| || ||||||||||||||| Sbjct: 94318 ggccgccgtcgccgccgccgccgcgtcc 94291
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 494 ggcggccgccgcggcggggctcgcgctg 521 |||||| |||||||| |||||||||||| Sbjct: 2777328 ggcggcggccgcggccgggctcgcgctg 2777301 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 484 acctgatccaggcggccgccgcggcggg 511 ||||||| |||||||| ||||||||||| Sbjct: 2194453 acctgatgcaggcggcggccgcggcggg 2194426
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gccgccgtggctgccgccgccgcg 314 |||||| ||||||||||||||||| Sbjct: 24644 gccgccatggctgccgccgccgcg 24667
>dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1471_E11 Length = 103912 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 ggcggccgccgcggcggggc 513 |||||||||||||||||||| Sbjct: 73175 ggcggccgccgcggcggggc 73156
>gb|AE005045.1| Halobacterium sp. NRC-1 section 76 of 170 of the complete genome Length = 10087 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gccgccgtggctgccgccgc 310 |||||||||||||||||||| Sbjct: 6196 gccgccgtggctgccgccgc 6177
>dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0622F08 Length = 140628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aggcggccgccgcggcgggg 512 |||||||||||||||||||| Sbjct: 108693 aggcggccgccgcggcgggg 108674
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1521_G01 Length = 144102 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aggcggccgccgcggcgggg 512 |||||||||||||||||||| Sbjct: 26017 aggcggccgccgcggcgggg 25998
>dbj|AK121757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088G12, full insert sequence Length = 2363 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 gccgccgtggctgccgccgccgcg 314 |||||| ||||||||||||||||| Sbjct: 80 gccgccatggctgccgccgccgcg 103
>dbj|AK109863.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H07, full insert sequence Length = 1401 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 ggcggccgccgcggcggggc 513 |||||||||||||||||||| Sbjct: 869 ggcggccgccgcggcggggc 888
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cgccgccggagccggtggag 176 |||||||||||||||||||| Sbjct: 4683678 cgccgccggagccggtggag 4683697
>gb|BC057128.1| Mus musculus RIKEN cDNA 6430527G18 gene, mRNA (cDNA clone MGC:63318 IMAGE:6810092), complete cds Length = 3119 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 759 ggccgccgcggctgccgccgccgc 782
>gb|AC154661.2| Mus musculus BAC clone RP24-274N1 from 12, complete sequence Length = 159667 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 ggccgccgtggctgccgccgccgc 313 ||||||||||||||| |||||||| Sbjct: 16343 ggccgccgtggctgctgccgccgc 16320
>gb|AC154543.2| Mus musculus BAC clone RP23-228E21 from 12, complete sequence Length = 197876 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 ggccgccgtggctgccgccgccgc 313 ||||||||||||||| |||||||| Sbjct: 189305 ggccgccgtggctgctgccgccgc 189282
>gb|BC063253.1| Mus musculus RIKEN cDNA 6430527G18 gene, mRNA (cDNA clone MGC:66698 IMAGE:6810092), complete cds Length = 3205 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 ggccgccgtggctgccgccgccgc 313 |||||||| ||||||||||||||| Sbjct: 759 ggccgccgcggctgccgccgccgc 782
>gb|AC158981.2| Mus musculus BAC clone RP23-230C10 from chromosome 14, complete sequence Length = 213277 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cggcggggctcgcgctgccgcact 528 ||||||||||||||| |||||||| Sbjct: 163673 cggcggggctcgcgcagccgcact 163696 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,798,603 Number of Sequences: 3902068 Number of extensions: 3798603 Number of successful extensions: 99924 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95150 Number of HSP's gapped (non-prelim): 4762 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
