ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart24c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 541 e-151
2ref|XM_467545.1| Oryza sativa (japonica cultivar-group), mRNA 509 e-141
3dbj|AK073256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 509 e-141
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6ref|NM_112639.2| Arabidopsis thaliana BSH AT3G17590 (BSH) mRNA, ... 48 0.032
7gb|BT024620.1| Arabidopsis thaliana At3g17590 mRNA, complete cds 48 0.032
8dbj|AK117162.1| Arabidopsis thaliana At3g17590 mRNA for unknown ... 48 0.032
9dbj|AB022219.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 48 0.032
10gb|U88061.1|ATU88061 Arabidopsis thaliana SNF5 homolog BSH (bsh)... 48 0.032
11emb|CT025155.9| Mouse DNA sequence from clone RP23-228F18 on chr... 44 0.50
12gb|AY658940.1| Synthetic construct Peudomonas aeruginosa clone F... 42 2.0
13gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184... 42 2.0
14emb|X54201.1|PAGORG Pseudomonas aeruginosa gor gene for glutathi... 42 2.0
15gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 ma... 42 2.0
16gb|AE004865.1| Pseudomonas aeruginosa PAO1, section 426 of 529 o... 42 2.0
17gb|AE004629.1| Pseudomonas aeruginosa PAO1, section 190 of 529 o... 42 2.0
18gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 42 2.0
19gb|AF051690.1|AF051690 Pseudomonas aeruginosa iron-uptake factor... 42 2.0
20emb|AL929159.4| Mouse DNA sequence from clone RP23-424F12 on chr... 42 2.0
21gb|AC164644.5| Mus musculus BAC clone RP23-276J7 from chromosome... 40 7.7
22gb|BC053232.1| Danio rerio WW domain binding protein 2, mRNA (cD... 40 7.7
23gb|BC073708.1| Xenopus laevis MGC83646 protein, mRNA (cDNA clone... 40 7.7
24gb|AC127676.4| Mus musculus BAC clone RP24-560M21 from chromosom... 40 7.7
25gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 7.7
26dbj|AB225646.1| Aspergillus oryzae cDNA, contig sequence: AoEST2501 40 7.7
27dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 7.7
28dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.7
29ref|NM_199710.1| Danio rerio WW domain binding protein 2 (wbp2),... 40 7.7
30gb|AC011743.9| Homo sapiens BAC clone RP11-299O14 from 2, comple... 40 7.7
31emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chro... 40 7.7
32emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on ch... 40 7.7 
>dbj|AK105251.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C11, full
            insert sequence
          Length = 1965

 Score =  541 bits (273), Expect = e-151
 Identities = 399/441 (90%)
 Strand = Plus / Plus

                                                                        
Query: 130  gatgaagacggtgagcctcggcgccccgcgctcctccactgtgaagttccgcatgccgac 189
            ||||||||||||||||||||||||| |  |  | ||  |||| |||||||||||||||||
Sbjct: 920  gatgaagacggtgagcctcggcgccgccaggccttcgtctgtcaagttccgcatgccgac 979

                                                                        
Query: 190  gagggacaacctggtgccgatacgcgtcgacatcgaggtggacggccagcgctacaggga 249
            |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 980  gagggataacctggtgccgatacgcgtcgacgtcgaggtggacggccagcgctacaggga 1039

                                                                        
Query: 250  cgccttcacctggaacccccgcgatcccgactcggaggtcatcaccttcgccaagaggac 309
            ||||||||||||||||||  |||| |||||||||||| |||| | |||||| ||||||||
Sbjct: 1040 cgccttcacctggaacccatgcgaccccgactcggagatcataagcttcgcgaagaggac 1099

                                                                        
Query: 310  ggccaaggagctcaagcttccggccacctttgtccctcagatgctccactccatccaggg 369
            ||||||||| |||||||| ||||||| ||| ||||| |||||||||||||||||||||||
Sbjct: 1100 ggccaaggacctcaagctgccggccaacttcgtcccccagatgctccactccatccaggg 1159

                                                                        
Query: 370  gcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaaggagaagattat 429
            |||| || | ||||||||||||||||||||  ||||||||||| ||| |||||||||| |
Sbjct: 1160 gcaactgaccgagttccgttcctacgagggagaggagatgcagatcagggagaagattgt 1219

                                                                        
Query: 430  gcccctcaagattgacctccgagtgaacaatacgatagttagagatcagttcttgtggga 489
            |||||||||||||||||||||  | ||||||||  || | ||||||||||||||||||||
Sbjct: 1220 gcccctcaagattgacctccggataaacaatactgtaatcagagatcagttcttgtggga 1279

                                                                        
Query: 490  tataggcaaccttgaaagtgatcctgaggaatttgcaaggacgttatgtgatgatttgaa 549
            |||||||||||| || ||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 1280 tataggcaacctggatagtgatcctgaggaatttgcaaggacgctatgtgacgatttgaa 1339

                                 
Query: 550  cattacagatcctgaagttgg 570
            |||||||||||||||||||||
Sbjct: 1340 cattacagatcctgaagttgg 1360
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>ref|XM_467545.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1103

 Score =  509 bits (257), Expect = e-141
 Identities = 359/393 (91%)
 Strand = Plus / Plus

                                                                       
Query: 178 ccgcatgccgacgagggacaacctggtgccgatacgcgtcgacatcgaggtggacggcca 237
           ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13  ccgcaggccgacgagggataacctggtgccgatacgcgtcgacgtcgaggtggacggcca 72

                                                                       
Query: 238 gcgctacagggacgccttcacctggaacccccgcgatcccgactcggaggtcatcacctt 297
           ||||||||||||||||||||||||||||||  |||| |||||||||||| |||| | |||
Sbjct: 73  gcgctacagggacgccttcacctggaacccatgcgaccccgactcggagatcataagctt 132

                                                                       
Query: 298 cgccaagaggacggccaaggagctcaagcttccggccacctttgtccctcagatgctcca 357
           ||| ||||||||||||||||| |||||||| ||||||| ||| ||||| |||||||||||
Sbjct: 133 cgcgaagaggacggccaaggacctcaagctgccggccaacttcgtcccccagatgctcca 192

                                                                       
Query: 358 ctccatccaggggcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaa 417
           |||||||||||||||| || | ||||||||||||||||||||  ||||||||||| ||| 
Sbjct: 193 ctccatccaggggcaactgaccgagttccgttcctacgagggagaggagatgcagatcag 252

                                                                       
Query: 418 ggagaagattatgcccctcaagattgacctccgagtgaacaatacgatagttagagatca 477
           |||||||||| ||||||||||||||||||||||  | ||||||||  || | ||||||||
Sbjct: 253 ggagaagattgtgcccctcaagattgacctccggataaacaatactgtaatcagagatca 312

                                                                       
Query: 478 gttcttgtgggatataggcaaccttgaaagtgatcctgaggaatttgcaaggacgttatg 537
           |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 313 gttcttgtgggatataggcaacctggatagtgatcctgaggaatttgcaaggacgctatg 372

                                            
Query: 538 tgatgatttgaacattacagatcctgaagttgg 570
           ||| |||||||||||||||||||||||||||||
Sbjct: 373 tgacgatttgaacattacagatcctgaagttgg 405
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>dbj|AK073256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H11, full
           insert sequence
          Length = 1103

 Score =  509 bits (257), Expect = e-141
 Identities = 359/393 (91%)
 Strand = Plus / Plus

                                                                       
Query: 178 ccgcatgccgacgagggacaacctggtgccgatacgcgtcgacatcgaggtggacggcca 237
           ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 13  ccgcaggccgacgagggataacctggtgccgatacgcgtcgacgtcgaggtggacggcca 72

                                                                       
Query: 238 gcgctacagggacgccttcacctggaacccccgcgatcccgactcggaggtcatcacctt 297
           ||||||||||||||||||||||||||||||  |||| |||||||||||| |||| | |||
Sbjct: 73  gcgctacagggacgccttcacctggaacccatgcgaccccgactcggagatcataagctt 132

                                                                       
Query: 298 cgccaagaggacggccaaggagctcaagcttccggccacctttgtccctcagatgctcca 357
           ||| ||||||||||||||||| |||||||| ||||||| ||| ||||| |||||||||||
Sbjct: 133 cgcgaagaggacggccaaggacctcaagctgccggccaacttcgtcccccagatgctcca 192

                                                                       
Query: 358 ctccatccaggggcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaa 417
           |||||||||||||||| || | ||||||||||||||||||||  ||||||||||| ||| 
Sbjct: 193 ctccatccaggggcaactgaccgagttccgttcctacgagggagaggagatgcagatcag 252

                                                                       
Query: 418 ggagaagattatgcccctcaagattgacctccgagtgaacaatacgatagttagagatca 477
           |||||||||| ||||||||||||||||||||||  | ||||||||  || | ||||||||
Sbjct: 253 ggagaagattgtgcccctcaagattgacctccggataaacaatactgtaatcagagatca 312

                                                                       
Query: 478 gttcttgtgggatataggcaaccttgaaagtgatcctgaggaatttgcaaggacgttatg 537
           |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 313 gttcttgtgggatataggcaacctggatagtgatcctgaggaatttgcaaggacgctatg 372

                                            
Query: 538 tgatgatttgaacattacagatcctgaagttgg 570
           ||| |||||||||||||||||||||||||||||
Sbjct: 373 tgacgatttgaacattacagatcctgaagttgg 405
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  155 bits (78), Expect = 2e-34
 Identities = 87/90 (96%)
 Strand = Plus / Plus

                                                                            
Query: 178      ccgcatgccgacgagggacaacctggtgccgatacgcgtcgacatcgaggtggacggcca 237
                ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 30090670 ccgcaggccgacgagggataacctggtgccgatacgcgtcgacgtcgaggtggacggcca 30090729

                                              
Query: 238      gcgctacagggacgccttcacctggaaccc 267
                ||||||||||||||||||||||||||||||
Sbjct: 30090730 gcgctacagggacgccttcacctggaaccc 30090759



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                            
Query: 487      ggatataggcaaccttgaaagtgatcctgaggaatttgcaaggacgttatgtgatgattt 546
                ||||||||||||||| || ||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 30091383 ggatataggcaacctggatagtgatcctgaggaatttgcaaggacgctatgtgacgattt 30091442

                                        
Query: 547      gaacattacagatcctgaagttgg 570
                ||||||||||||||||||||||||
Sbjct: 30091443 gaacattacagatcctgaagttgg 30091466



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                            
Query: 275      cccgactcggaggtcatcaccttcgccaagaggacggccaaggagctcaagcttccggcc 334
                |||||||||||| |||| | |||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 30090864 cccgactcggagatcataagcttcgcgaagaggacggccaaggacctcaagctgccggcc 30090923

                                                  
Query: 335      acctttgtccctcagatgctccactccatccagg 368
                | ||| ||||| ||||||||||||||||||||||
Sbjct: 30090924 aacttcgtcccccagatgctccactccatccagg 30090957



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 365      caggggcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaaggagaag 424
                ||||||||| || | ||||||||||||||||||||  ||||||||||| ||| |||||||
Sbjct: 30091057 caggggcaactgaccgagttccgttcctacgagggagaggagatgcagatcagggagaag 30091116

                               
Query: 425      attatgcccctcaag 439
                ||| |||||||||||
Sbjct: 30091117 attgtgcccctcaag 30091131



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 130      gatgaagacggtgagcctcggcgcc 154
                |||||||||||||||||||||||||
Sbjct: 30090526 gatgaagacggtgagcctcggcgcc 30090550



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                   
Query: 438      agattgacctccgagtgaacaatacgatagttagagatcagttcttgtggg 488
                |||||||||||||  | ||||||||  || | |||||||||||||||||||
Sbjct: 30091213 agattgacctccggataaacaatactgtaatcagagatcagttcttgtggg 30091263
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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0685G12
          Length = 149155

 Score =  155 bits (78), Expect = 2e-34
 Identities = 87/90 (96%)
 Strand = Plus / Plus

                                                                         
Query: 178   ccgcatgccgacgagggacaacctggtgccgatacgcgtcgacatcgaggtggacggcca 237
             ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 70267 ccgcaggccgacgagggataacctggtgccgatacgcgtcgacgtcgaggtggacggcca 70326

                                           
Query: 238   gcgctacagggacgccttcacctggaaccc 267
             ||||||||||||||||||||||||||||||
Sbjct: 70327 gcgctacagggacgccttcacctggaaccc 70356



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                         
Query: 487   ggatataggcaaccttgaaagtgatcctgaggaatttgcaaggacgttatgtgatgattt 546
             ||||||||||||||| || ||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 70980 ggatataggcaacctggatagtgatcctgaggaatttgcaaggacgctatgtgacgattt 71039

                                     
Query: 547   gaacattacagatcctgaagttgg 570
             ||||||||||||||||||||||||
Sbjct: 71040 gaacattacagatcctgaagttgg 71063



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                         
Query: 275   cccgactcggaggtcatcaccttcgccaagaggacggccaaggagctcaagcttccggcc 334
             |||||||||||| |||| | |||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 70461 cccgactcggagatcataagcttcgcgaagaggacggccaaggacctcaagctgccggcc 70520

                                               
Query: 335   acctttgtccctcagatgctccactccatccagg 368
             | ||| ||||| ||||||||||||||||||||||
Sbjct: 70521 aacttcgtcccccagatgctccactccatccagg 70554



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                         
Query: 365   caggggcaattggcagagttccgttcctacgaggggcaggagatgcaggtcaaggagaag 424
             ||||||||| || | ||||||||||||||||||||  ||||||||||| ||| |||||||
Sbjct: 70654 caggggcaactgaccgagttccgttcctacgagggagaggagatgcagatcagggagaag 70713

                            
Query: 425   attatgcccctcaag 439
             ||| |||||||||||
Sbjct: 70714 attgtgcccctcaag 70728



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 130   gatgaagacggtgagcctcggcgcc 154
             |||||||||||||||||||||||||
Sbjct: 70123 gatgaagacggtgagcctcggcgcc 70147



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 438   agattgacctccgagtgaacaatacgatagttagagatcagttcttgtggg 488
             |||||||||||||  | ||||||||  || | |||||||||||||||||||
Sbjct: 70810 agattgacctccggataaacaatactgtaatcagagatcagttcttgtggg 70860
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>ref|NM_112639.2| Arabidopsis thaliana BSH AT3G17590 (BSH) mRNA, complete cds
          Length = 900

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 501 ttgaaagtgatcctgaggaatttgcaag 528
           |||| |||||||||||||||||||||||
Sbjct: 442 ttgagagtgatcctgaggaatttgcaag 469
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>gb|BT024620.1| Arabidopsis thaliana At3g17590 mRNA, complete cds
          Length = 723

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 501 ttgaaagtgatcctgaggaatttgcaag 528
           |||| |||||||||||||||||||||||
Sbjct: 368 ttgagagtgatcctgaggaatttgcaag 395
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>dbj|AK117162.1| Arabidopsis thaliana At3g17590 mRNA for unknown protein, complete
           cds, clone: RAFL16-70-I07
          Length = 898

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 501 ttgaaagtgatcctgaggaatttgcaag 528
           |||| |||||||||||||||||||||||
Sbjct: 443 ttgagagtgatcctgaggaatttgcaag 470
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>dbj|AB022219.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MKP6
          Length = 83233

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 501   ttgaaagtgatcctgaggaatttgcaag 528
             |||| |||||||||||||||||||||||
Sbjct: 39461 ttgagagtgatcctgaggaatttgcaag 39434
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>gb|U88061.1|ATU88061 Arabidopsis thaliana SNF5 homolog BSH (bsh) mRNA, complete cds
          Length = 876

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 501 ttgaaagtgatcctgaggaatttgcaag 528
           |||| |||||||||||||||||||||||
Sbjct: 404 ttgagagtgatcctgaggaatttgcaag 431
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>emb|CT025155.9| Mouse DNA sequence from clone RP23-228F18 on chromosome 16, complete
              sequence
          Length = 203093

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 533    ttatgtgatgatttgaacatta 554
              ||||||||||||||||||||||
Sbjct: 186263 ttatgtgatgatttgaacatta 186242
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>gb|AY658940.1| Synthetic construct Peudomonas aeruginosa clone FLH046880.01F
           PA4512 gene, partial cds
          Length = 900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 220 catcgaggtggacggccagcgctac 244
           |||||||||||||||| ||||||||
Sbjct: 534 catcgaggtggacggcgagcgctac 558
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>gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184c17 map 16, complete
             sequence
          Length = 146040

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 331   ggccacctttgtccctcagatgctc 355
             |||||||||||||||||||| ||||
Sbjct: 72176 ggccacctttgtccctcagaggctc 72152
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>emb|X54201.1|PAGORG Pseudomonas aeruginosa gor gene for glutathione reductase and ORF1
           for hypothetical protein, strain PAO8
          Length = 1803

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 222 tcgaggtggacggccagcgct 242
           |||||||||||||||||||||
Sbjct: 594 tcgaggtggacggccagcgct 614
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>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence
          Length = 195335

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 331    ggccacctttgtccctcagatgctc 355
              |||||||||||||||||||| ||||
Sbjct: 180043 ggccacctttgtccctcagaggctc 180067
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>gb|AE004865.1| Pseudomonas aeruginosa PAO1, section 426 of 529 of the complete
           genome
          Length = 10413

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 220 catcgaggtggacggccagcgctac 244
           |||||||||||||||| ||||||||
Sbjct: 629 catcgaggtggacggcgagcgctac 653
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>gb|AE004629.1| Pseudomonas aeruginosa PAO1, section 190 of 529 of the complete
            genome
          Length = 10541

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  tcgaggtggacggccagcgct 242
            |||||||||||||||||||||
Sbjct: 1052 tcgaggtggacggccagcgct 1072
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>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 331    ggccacctttgtccctcagatgctc 355
              |||||||||||||||||||| ||||
Sbjct: 111431 ggccacctttgtccctcagaggctc 111407
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>gb|AF051690.1|AF051690 Pseudomonas aeruginosa iron-uptake factor (piuC), hydroxamate-type
            ferrisiderophore receptor (piuA), and iron-uptake factor
            (piuB) genes, complete cds
          Length = 7701

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 220  catcgaggtggacggccagcgctac 244
            |||||||||||||||| ||||||||
Sbjct: 7687 catcgaggtggacggcgagcgctac 7663
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>emb|AL929159.4| Mouse DNA sequence from clone RP23-424F12 on chromosome 2, complete
             sequence
          Length = 98465

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 400   gcaggagatgcaggtcaagga 420
             |||||||||||||||||||||
Sbjct: 89215 gcaggagatgcaggtcaagga 89235
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>gb|AC164644.5| Mus musculus BAC clone RP23-276J7 from chromosome 5, complete sequence
          Length = 171252

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 548    aacattacagatcctgaagt 567
              ||||||||||||||||||||
Sbjct: 140363 aacattacagatcctgaagt 140344
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>gb|BC053232.1| Danio rerio WW domain binding protein 2, mRNA (cDNA clone MGC:64061
           IMAGE:6794142), complete cds
          Length = 1205

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 82  ccgaaacccccacccgaacggcgg 105
           |||||||| |||||||||||||||
Sbjct: 120 ccgaaaccaccacccgaacggcgg 143
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>gb|BC073708.1| Xenopus laevis MGC83646 protein, mRNA (cDNA clone MGC:83646
           IMAGE:5085171), complete cds
          Length = 3173

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 507 gtgatcctgaggaatttgcaagga 530
           |||||||||||||| |||||||||
Sbjct: 461 gtgatcctgaggaagttgcaagga 484
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>gb|AC127676.4| Mus musculus BAC clone RP24-560M21 from chromosome 5, complete sequence
          Length = 146575

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 548   aacattacagatcctgaagt 567
             ||||||||||||||||||||
Sbjct: 33125 aacattacagatcctgaagt 33106
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     tcgacatcgaggtggacggc 235
               ||||||||||||||||||||
Sbjct: 2878415 tcgacatcgaggtggacggc 2878434
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>dbj|AB225646.1| Aspergillus oryzae cDNA, contig sequence: AoEST2501
          Length = 949

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 114 ggaccgcccggacggcgatgaagacggt 141
           |||| |||| ||||||||||||||||||
Sbjct: 811 ggactgccccgacggcgatgaagacggt 784
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 114    ggaccgcccggacggcgatgaagacggt 141
              |||| |||| ||||||||||||||||||
Sbjct: 274103 ggactgccccgacggcgatgaagacggt 274076
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 126     cggcgatgaagacggtgagc 145
               ||||||||||||||||||||
Sbjct: 2054977 cggcgatgaagacggtgagc 2054958
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>ref|NM_199710.1| Danio rerio WW domain binding protein 2 (wbp2), mRNA
          Length = 1205

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 82  ccgaaacccccacccgaacggcgg 105
           |||||||| |||||||||||||||
Sbjct: 120 ccgaaaccaccacccgaacggcgg 143
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>gb|AC011743.9| Homo sapiens BAC clone RP11-299O14 from 2, complete sequence
          Length = 114495

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 474  atcagttcttgtgggatata 493
            ||||||||||||||||||||
Sbjct: 4750 atcagttcttgtgggatata 4769
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>emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chromosome 2, complete
             sequence
          Length = 188624

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   atgctccactccatccaggg 369
             ||||||||||||||||||||
Sbjct: 90599 atgctccactccatccaggg 90618
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>emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on chromosome 4, complete
             sequence
          Length = 166942

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   aggcaaccttgaaagtgatc 512
             ||||||||||||||||||||
Sbjct: 90852 aggcaaccttgaaagtgatc 90871


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,701,282
Number of Sequences: 3902068
Number of extensions: 3701282
Number of successful extensions: 69415
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69197
Number of HSP's gapped (non-prelim): 218
length of query: 570
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 547
effective length of database: 17,143,297,704
effective search space: 9377383844088
effective search space used: 9377383844088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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