ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart24b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479720.1| Oryza sativa (japonica cultivar-group), mRNA 468 e-128
2dbj|AK101912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
4dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
5gb|AY086025.1| Arabidopsis thaliana clone 207201 mRNA, complete ... 90 9e-15
6ref|NM_125757.2| Arabidopsis thaliana oxidoreductase/ zinc ion b... 84 6e-13
7ref|NM_180926.2| Arabidopsis thaliana oxidoreductase/ zinc ion b... 84 6e-13
8gb|BT014548.1| Lycopersicon esculentum clone 133965F, mRNA sequence 84 6e-13
9gb|AY056783.1| Arabidopsis thaliana AT5g63620/MBK5_9 mRNA, compl... 84 6e-13
10emb|BX831175.1|CNS0A0NX Arabidopsis thaliana Full-length cDNA Co... 84 6e-13
11emb|BX833839.1|CNS0A0EM Arabidopsis thaliana Full-length cDNA Co... 84 6e-13
12gb|BT001139.1| Arabidopsis thaliana At5g63620/MBK5_9 mRNA, compl... 84 6e-13
13gb|AC148758.19| Medicago truncatula clone mth2-50l17, complete s... 80 9e-12
14dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 72 2e-09
15gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 46 0.13
16gb|AY104123.1| Zea mays PCO065682 mRNA sequence 44 0.49
17gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 2.0
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.0
19gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 42 2.0
20emb|Z70678.1|SCXV55KB S.cerevisiae chromosome XV DNA, 54.7 kb re... 42 2.0
21emb|CR847800.4| Zebrafish DNA sequence from clone DKEY-182M5 in ... 42 2.0
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
23dbj|AK069223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
24dbj|AK065417.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
25emb|Z74971.1|SCYOR063W S.cerevisiae chromosome XV reading frame ... 42 2.0
26gb|DQ332449.1| Synthetic construct Saccharomyces cerevisiae clon... 42 2.0
27gb|J01351.1|YSCRP13 S.cerevisiae ribosomal protein L3 (tcm1) gene 42 2.0
28gb|BT016362.1| Zea mays clone Contig195 mRNA sequence 40 7.7
29gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.7
30gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.7
31gb|AC147259.3| Mus musculus BAC clone RP24-178N16 from chromosom... 40 7.7
32emb|BX276092.9| Human DNA sequence from clone RP11-402P6 on chro... 40 7.7
33emb|AL050333.18|HSDJ93K22 Human DNA sequence from clone RP1-93K2... 40 7.7
34emb|Y11029.1|ZMFDH Z.mays mRNA for glutathione-dependent formald... 40 7.7
35emb|AL670472.7| Mouse DNA sequence from clone RP23-26M1 on chrom... 40 7.7
36emb|AL772225.5| Mouse DNA sequence from clone RP23-235D17 on chr... 40 7.7
37gb|AC174806.2| Mus musculus BAC clone RP24-526I8 from chromosome... 40 7.7
38gb|U21102.1|U21102 Mesocricetus auratus microsomal triglyceride ... 40 7.7
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
40dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
41emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, co... 40 7.7
42dbj|AK100093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
43emb|CT573217.3| CH250-279N2, complete sequence 40 7.7
44gb|L47326.1|RCAADHI Rhodobacter sphaeroides alcohol dehydrogenas... 40 7.7
45emb|AL645753.11| Mouse DNA sequence from clone CT7-315N12 on chr... 40 7.7
46emb|AL691425.6| Mouse DNA sequence from clone RP23-232E4 on chro... 40 7.7 
>ref|XM_479720.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1644

 Score =  468 bits (236), Expect = e-128
 Identities = 404/460 (87%)
 Strand = Plus / Plus

                                                                       
Query: 107 cggggtaccacgtgtcgggcgggccgagcttcatgcgcgcggccgtgttctgggagcccg 166
           |||||||||||||  | |||||||| |||||||||||||  || ||||||||||||||||
Sbjct: 314 cggggtaccacgtcgccggcgggcccagcttcatgcgcggcgcggtgttctgggagcccg 373

                                                                       
Query: 167 gccgcccgctcaccatggaggagttccgcatgccgcgccccaaggccggcgaggtcctcg 226
           ||||||| |||||| | ||||| |||||||||||||||||||||||||||||| ||||| 
Sbjct: 374 gccgccctctcaccctcgaggacttccgcatgccgcgccccaaggccggcgagctcctca 433

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||||||||||||||||||||| |||||||| |||||||||||  | || ||||| ||||
Sbjct: 434 tcaagaccaaagcttgtggagtttgccactccgatctccatgttctcaagggtgagctcc 493

                                                                       
Query: 287 ctttcgccagcccttgtgttgttggccatgagatcacaggggaggttgtcgaccatggcg 346
           | ||| ||||||| || |||||||| ||||||||||| ||||||||||| ||||||||  
Sbjct: 494 cattctccagcccctgcgttgttgggcatgagatcactggggaggttgttgaccatggta 553

                                                                       
Query: 347 cgcacacgcccgctgagatcgtcaataggttcccagttggcagtcatgttgttggagcct 406
           | ||||| || ||||||||| |||| |||||||||||||||||||||||||| || ||||
Sbjct: 554 ctcacacccctgctgagatcatcaacaggttcccagttggcagtcatgttgtgggtgcct 613

                                                                       
Query: 407 tcataatgccctgtgggaattgcttttactgtgttaagggccaggaagacctctgtgagt 466
           ||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||
Sbjct: 614 tcataatgccctgtgggaattgcttctactgtgttaagggccaagaagatctgtgtgagt 673

                                                                       
Query: 467 ctttctttgcgtataatcgtgctaaaggaacactatatgatggtgaaacccgtctctttc 526
           |||||||||| || || |||||||||||||| ||||| |||||| |||||||  | || |
Sbjct: 674 ctttctttgcatacaaccgtgctaaaggaacgctatacgatggtcaaacccgattattcc 733

                                                   
Query: 527 tacgcagcaatggaaaaccggtgtacatgtacagcatggg 566
           | || ||||||||||| || ||||||||||| || |||||
Sbjct: 734 ttcgtagcaatggaaagccagtgtacatgtatagtatggg 773
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>dbj|AK101912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071G08, full
           insert sequence
          Length = 1644

 Score =  468 bits (236), Expect = e-128
 Identities = 404/460 (87%)
 Strand = Plus / Plus

                                                                       
Query: 107 cggggtaccacgtgtcgggcgggccgagcttcatgcgcgcggccgtgttctgggagcccg 166
           |||||||||||||  | |||||||| |||||||||||||  || ||||||||||||||||
Sbjct: 314 cggggtaccacgtcgccggcgggcccagcttcatgcgcggcgcggtgttctgggagcccg 373

                                                                       
Query: 167 gccgcccgctcaccatggaggagttccgcatgccgcgccccaaggccggcgaggtcctcg 226
           ||||||| |||||| | ||||| |||||||||||||||||||||||||||||| ||||| 
Sbjct: 374 gccgccctctcaccctcgaggacttccgcatgccgcgccccaaggccggcgagctcctca 433

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||||||||||||||||||||| |||||||| |||||||||||  | || ||||| ||||
Sbjct: 434 tcaagaccaaagcttgtggagtttgccactccgatctccatgttctcaagggtgagctcc 493

                                                                       
Query: 287 ctttcgccagcccttgtgttgttggccatgagatcacaggggaggttgtcgaccatggcg 346
           | ||| ||||||| || |||||||| ||||||||||| ||||||||||| ||||||||  
Sbjct: 494 cattctccagcccctgcgttgttgggcatgagatcactggggaggttgttgaccatggta 553

                                                                       
Query: 347 cgcacacgcccgctgagatcgtcaataggttcccagttggcagtcatgttgttggagcct 406
           | ||||| || ||||||||| |||| |||||||||||||||||||||||||| || ||||
Sbjct: 554 ctcacacccctgctgagatcatcaacaggttcccagttggcagtcatgttgtgggtgcct 613

                                                                       
Query: 407 tcataatgccctgtgggaattgcttttactgtgttaagggccaggaagacctctgtgagt 466
           ||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||
Sbjct: 614 tcataatgccctgtgggaattgcttctactgtgttaagggccaagaagatctgtgtgagt 673

                                                                       
Query: 467 ctttctttgcgtataatcgtgctaaaggaacactatatgatggtgaaacccgtctctttc 526
           |||||||||| || || |||||||||||||| ||||| |||||| |||||||  | || |
Sbjct: 674 ctttctttgcatacaaccgtgctaaaggaacgctatacgatggtcaaacccgattattcc 733

                                                   
Query: 527 tacgcagcaatggaaaaccggtgtacatgtacagcatggg 566
           | || ||||||||||| || ||||||||||| || |||||
Sbjct: 734 ttcgtagcaatggaaagccagtgtacatgtatagtatggg 773
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  159 bits (80), Expect = 1e-35
 Identities = 119/132 (90%)
 Strand = Plus / Plus

                                                                          
Query: 107    cggggtaccacgtgtcgggcgggccgagcttcatgcgcgcggccgtgttctgggagcccg 166
              |||||||||||||  | |||||||| |||||||||||||  || ||||||||||||||||
Sbjct: 452498 cggggtaccacgtcgccggcgggcccagcttcatgcgcggcgcggtgttctgggagcccg 452557

                                                                          
Query: 167    gccgcccgctcaccatggaggagttccgcatgccgcgccccaaggccggcgaggtcctcg 226
              ||||||| |||||| | ||||| |||||||||||||||||||||||||||||| ||||| 
Sbjct: 452558 gccgccctctcaccctcgaggacttccgcatgccgcgccccaaggccggcgagctcctca 452617

                          
Query: 227    tcaagaccaaag 238
              ||||||||||||
Sbjct: 452618 tcaagaccaaag 452629



 Score =  123 bits (62), Expect = 7e-25
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                          
Query: 372    taggttcccagttggcagtcatgttgttggagccttcataatgccctgtgggaattgctt 431
              ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 453046 taggttcccagttggcagtcatgttgtgggtgccttcataatgccctgtgggaattgctt 453105

                            
Query: 432    ttactgtgttaagg 445
               |||||||||||||
Sbjct: 453106 ctactgtgttaagg 453119



 Score =  113 bits (57), Expect = 6e-22
 Identities = 120/141 (85%)
 Strand = Plus / Plus

                                                                          
Query: 237    agcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactccctttcgccag 296
              |||||||||||| |||||||| |||||||||||  | || ||||| ||||| ||| ||||
Sbjct: 452731 agcttgtggagtttgccactccgatctccatgttctcaagggtgagctcccattctccag 452790

                                                                          
Query: 297    cccttgtgttgttggccatgagatcacaggggaggttgtcgaccatggcgcgcacacgcc 356
              ||| || |||||||| ||||||||||| ||||||||||| ||||||||  | ||||| ||
Sbjct: 452791 cccctgcgttgttgggcatgagatcactggggaggttgttgaccatggtactcacacccc 452850

                                   
Query: 357    cgctgagatcgtcaataggtt 377
               ||||||||| |||| |||||
Sbjct: 452851 tgctgagatcatcaacaggtt 452871



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                          
Query: 443    agggccaggaagacctctgtgagtctttctttgcgtataatcgtgctaaaggaacactat 502
              ||||||| ||||| || ||||||||||||||||| || || |||||||||||||| ||||
Sbjct: 453235 agggccaagaagatctgtgtgagtctttctttgcatacaaccgtgctaaaggaacgctat 453294

                              
Query: 503    atgatggtgaaacccg 518
              | |||||| |||||||
Sbjct: 453295 acgatggtcaaacccg 453310
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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0007D08
          Length = 183142

 Score =  159 bits (80), Expect = 1e-35
 Identities = 119/132 (90%)
 Strand = Plus / Plus

                                                                         
Query: 107   cggggtaccacgtgtcgggcgggccgagcttcatgcgcgcggccgtgttctgggagcccg 166
             |||||||||||||  | |||||||| |||||||||||||  || ||||||||||||||||
Sbjct: 42458 cggggtaccacgtcgccggcgggcccagcttcatgcgcggcgcggtgttctgggagcccg 42517

                                                                         
Query: 167   gccgcccgctcaccatggaggagttccgcatgccgcgccccaaggccggcgaggtcctcg 226
             ||||||| |||||| | ||||| |||||||||||||||||||||||||||||| ||||| 
Sbjct: 42518 gccgccctctcaccctcgaggacttccgcatgccgcgccccaaggccggcgagctcctca 42577

                         
Query: 227   tcaagaccaaag 238
             ||||||||||||
Sbjct: 42578 tcaagaccaaag 42589



 Score =  123 bits (62), Expect = 7e-25
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                         
Query: 372   taggttcccagttggcagtcatgttgttggagccttcataatgccctgtgggaattgctt 431
             ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 43006 taggttcccagttggcagtcatgttgtgggtgccttcataatgccctgtgggaattgctt 43065

                           
Query: 432   ttactgtgttaagg 445
              |||||||||||||
Sbjct: 43066 ctactgtgttaagg 43079



 Score =  113 bits (57), Expect = 6e-22
 Identities = 120/141 (85%)
 Strand = Plus / Plus

                                                                         
Query: 237   agcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactccctttcgccag 296
             |||||||||||| |||||||| |||||||||||  | || ||||| ||||| ||| ||||
Sbjct: 42691 agcttgtggagtttgccactccgatctccatgttctcaagggtgagctcccattctccag 42750

                                                                         
Query: 297   cccttgtgttgttggccatgagatcacaggggaggttgtcgaccatggcgcgcacacgcc 356
             ||| || |||||||| ||||||||||| ||||||||||| ||||||||  | ||||| ||
Sbjct: 42751 cccctgcgttgttgggcatgagatcactggggaggttgttgaccatggtactcacacccc 42810

                                  
Query: 357   cgctgagatcgtcaataggtt 377
              ||||||||| |||| |||||
Sbjct: 42811 tgctgagatcatcaacaggtt 42831



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                         
Query: 443   agggccaggaagacctctgtgagtctttctttgcgtataatcgtgctaaaggaacactat 502
             ||||||| ||||| || ||||||||||||||||| || || |||||||||||||| ||||
Sbjct: 43195 agggccaagaagatctgtgtgagtctttctttgcatacaaccgtgctaaaggaacgctat 43254

                             
Query: 503   atgatggtgaaacccg 518
             | |||||| |||||||
Sbjct: 43255 acgatggtcaaacccg 43270
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>gb|AY086025.1| Arabidopsis thaliana clone 207201 mRNA, complete sequence
          Length = 1511

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||| ||||||||||||||||| |||||||||||||| ||||| |||||||| ||  | |
Sbjct: 351 tcaaaaccaaagcttgtggagtttgccactctgatcttcatgtgatgaaaggagagatac 410

                                                
Query: 287 ctttcgccagcccttgtgttgttggccatgagatcac 323
           | ||||| || ||||||||| |||| |||||||||||
Sbjct: 411 cgttcgctagtccttgtgttattggtcatgagatcac 447



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 487 gctaaaggaacactatatgatggtgaaacccgtctcttt 525
           ||||| ||||| || |||||||||||||| |||||||||
Sbjct: 611 gctaagggaactctttatgatggtgaaactcgtctcttt 649
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>ref|NM_125757.2| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT5G63620
           transcript variant AT5G63620.2 mRNA, complete cds
          Length = 1633

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||| ||||||||||||||||| |||||||||||||| ||||| |||||||| ||  | |
Sbjct: 351 tcaaaaccaaagcttgtggagtttgccactctgatcttcatgtgatgaaaggagagatac 410

                                             
Query: 287 ctttcgccagcccttgtgttgttggccatgagat 320
           | ||||| || ||||||||| |||| ||||||||
Sbjct: 411 cgttcgctagtccttgtgttattggtcatgagat 444
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>ref|NM_180926.2| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT5G63620
           transcript variant AT5G63620.1 mRNA, complete cds
          Length = 1673

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||| ||||||||||||||||| |||||||||||||| ||||| |||||||| ||  | |
Sbjct: 391 tcaaaaccaaagcttgtggagtttgccactctgatcttcatgtgatgaaaggagagatac 450

                                             
Query: 287 ctttcgccagcccttgtgttgttggccatgagat 320
           | ||||| || ||||||||| |||| ||||||||
Sbjct: 451 cgttcgctagtccttgtgttattggtcatgagat 484
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>gb|BT014548.1| Lycopersicon esculentum clone 133965F, mRNA sequence
          Length = 1487

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 235 aaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactccctttcgcc 294
           ||||||||||| |||||||||||||| || ||||| || || |||||||| || ||||| 
Sbjct: 310 aaagcttgtggggtctgccactctgacctgcatgtaataaagggtgaacttccattcgct 369

                                     
Query: 295 agcccttgtgttgttggccatgagat 320
           |||||||||||||| || ||||||||
Sbjct: 370 agcccttgtgttgtggggcatgagat 395
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>gb|AY056783.1| Arabidopsis thaliana AT5g63620/MBK5_9 mRNA, complete cds
          Length = 1537

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||| ||||||||||||||||| |||||||||||||| ||||| |||||||| ||  | |
Sbjct: 311 tcaaaaccaaagcttgtggagtttgccactctgatcttcatgtgatgaaaggagagatac 370

                                             
Query: 287 ctttcgccagcccttgtgttgttggccatgagat 320
           | ||||| || ||||||||| |||| ||||||||
Sbjct: 371 cgttcgctagtccttgtgttattggtcatgagat 404
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>emb|BX831175.1|CNS0A0NX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS65ZB02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1536

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||| ||||||||||||||||| |||||||||||||| ||||| |||||||| ||  | |
Sbjct: 331 tcaaaaccaaagcttgtggagtttgccactctgatcttcatgtgatgaaaggagagatac 390

                                             
Query: 287 ctttcgccagcccttgtgttgttggccatgagat 320
           | ||||| || ||||||||| |||| ||||||||
Sbjct: 391 cgttcgctagtccttgtgttattggtcatgagat 424
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>emb|BX833839.1|CNS0A0EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZH05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1576

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||| ||||||||||||||||| |||||||||||||| ||||| |||||||| ||  | |
Sbjct: 392 tcaaaaccaaagcttgtggagtttgccactctgatcttcatgtgatgaaaggagagatac 451

                                             
Query: 287 ctttcgccagcccttgtgttgttggccatgagat 320
           | ||||| || ||||||||| |||| ||||||||
Sbjct: 452 cgttcgctagtccttgtgttattggtcatgagat 485
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>gb|BT001139.1| Arabidopsis thaliana At5g63620/MBK5_9 mRNA, complete cds
          Length = 1284

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcaagaccaaagcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactcc 286
           |||| ||||||||||||||||| |||||||||||||| ||||| |||||||| ||  | |
Sbjct: 254 tcaaaaccaaagcttgtggagtttgccactctgatcttcatgtgatgaaaggagagatac 313

                                             
Query: 287 ctttcgccagcccttgtgttgttggccatgagat 320
           | ||||| || ||||||||| |||| ||||||||
Sbjct: 314 cgttcgctagtccttgtgttattggtcatgagat 347
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>gb|AC148758.19| Medicago truncatula clone mth2-50l17, complete sequence
          Length = 128831

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 241   tgtggagtctgccactctgatctccatgtcatgaaaggtgaactccctttcgccagccct 300
             |||||||| |||||||||||||| |||||||||||||||||| | || ||  | || |||
Sbjct: 82519 tgtggagtatgccactctgatcttcatgtcatgaaaggtgaaattccgttttcaagtcct 82460

                                 
Query: 301   tgtgttgttggccatgagat 320
             |||||||| |||||||||||
Sbjct: 82459 tgtgttgtgggccatgagat 82440



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 394   gttgttggagccttcataatgccctgtgg 422
             ||||||||||||||||| ||||| |||||
Sbjct: 82201 gttgttggagccttcattatgccttgtgg 82173



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 467   ctttctttgcgtataatcgtgctaaaggaacactatatgatggtgaaac 515
             |||| ||||| ||||| || || |||||||| ||||| |||||||||||
Sbjct: 82046 ctttttttgcttataaccgcgcaaaaggaaccctatacgatggtgaaac 81998
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>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5
          Length = 89779

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                         
Query: 237   agcttgtggagtctgccactctgatctccatgtcatgaaaggtgaactccctttcgccag 296
             |||||||||||| |||||||||||||| ||||| |||||||| ||  | || ||||| ||
Sbjct: 21074 agcttgtggagtttgccactctgatcttcatgtgatgaaaggagagataccgttcgctag 21015

                                     
Query: 297   cccttgtgttgttggccatgagat 320
              ||||||||| |||| ||||||||
Sbjct: 21014 tccttgtgttattggtcatgagat 20991
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 340     catggcgcgcacacgcccgctga 362
               |||||||||||||||||||||||
Sbjct: 3150701 catggcgcgcacacgcccgctga 3150679
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>gb|AY104123.1| Zea mays PCO065682 mRNA sequence
          Length = 919

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 533 gcaatggaaaaccggtgtacatgtacagcatggg 566
           ||||||| ||||||||||||||||| || |||||
Sbjct: 34  gcaatgggaaaccggtgtacatgtatagtatggg 67
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 44      gccggatcggcggcgccctcc 64
               |||||||||||||||||||||
Sbjct: 4061476 gccggatcggcggcgccctcc 4061456
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 15       catctccaccgcctcccgccgcgcc 39
                |||||||||| ||||||||||||||
Sbjct: 24228981 catctccacctcctcccgccgcgcc 24229005
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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
              sequence
          Length = 171664

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 15     catctccaccgcctcccgccgcgcc 39
              |||||||||| ||||||||||||||
Sbjct: 151643 catctccacctcctcccgccgcgcc 151619
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>emb|Z70678.1|SCXV55KB S.cerevisiae chromosome XV DNA, 54.7 kb region
          Length = 54719

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 453   agacctctgtgagtctttctt 473
             |||||||||||||||||||||
Sbjct: 22255 agacctctgtgagtctttctt 22235
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>emb|CR847800.4| Zebrafish DNA sequence from clone DKEY-182M5 in linkage group 14,
             complete sequence
          Length = 187193

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 246   agtctgccactctgatctcca 266
             |||||||||||||||||||||
Sbjct: 50005 agtctgccactctgatctcca 50025
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 15       catctccaccgcctcccgccgcgcc 39
                |||||||||| ||||||||||||||
Sbjct: 24146450 catctccacctcctcccgccgcgcc 24146474
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>dbj|AK069223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A01, full
           insert sequence
          Length = 1748

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 15  catctccaccgcctcccgccgcgcc 39
           |||||||||| ||||||||||||||
Sbjct: 309 catctccacctcctcccgccgcgcc 333
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>dbj|AK065417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022E06, full
           insert sequence
          Length = 2847

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 15  catctccaccgcctcccgccgcgcc 39
           |||||||||| ||||||||||||||
Sbjct: 296 catctccacctcctcccgccgcgcc 320
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>emb|Z74971.1|SCYOR063W S.cerevisiae chromosome XV reading frame ORF YOR063w
          Length = 2547

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 453  agacctctgtgagtctttctt 473
            |||||||||||||||||||||
Sbjct: 1891 agacctctgtgagtctttctt 1871
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>gb|DQ332449.1| Synthetic construct Saccharomyces cerevisiae clone FLH201410.01X
           RPL3 gene, complete sequence
          Length = 1164

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 agacctctgtgagtctttctt 473
           |||||||||||||||||||||
Sbjct: 737 agacctctgtgagtctttctt 717
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>gb|J01351.1|YSCRP13 S.cerevisiae ribosomal protein L3 (tcm1) gene
          Length = 1529

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 453 agacctctgtgagtctttctt 473
           |||||||||||||||||||||
Sbjct: 984 agacctctgtgagtctttctt 964
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>gb|BT016362.1| Zea mays clone Contig195 mRNA sequence
          Length = 1480

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 209 aggccggcgaggtcctcgtcaaga 232
           ||||||||||||||| ||||||||
Sbjct: 193 aggccggcgaggtccgcgtcaaga 216
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     gccccaaggccggcgaggtc 222
               ||||||||||||||||||||
Sbjct: 1220406 gccccaaggccggcgaggtc 1220425
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     aggccggcgaggtcctcgtc 228
               ||||||||||||||||||||
Sbjct: 1330307 aggccggcgaggtcctcgtc 1330326
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>gb|AC147259.3| Mus musculus BAC clone RP24-178N16 from chromosome Y, complete sequence
          Length = 149994

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 360    tgagatcgtcaataggttcccagt 383
              |||||| |||||||||||||||||
Sbjct: 144322 tgagattgtcaataggttcccagt 144299
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>emb|BX276092.9| Human DNA sequence from clone RP11-402P6 on chromosome X Contains five
              novel genes, five NADH dehydrogenase (ubiquinone) 1 alpha
              subcomplex, 4, 9kDa (NDUFA4) pseudogenes and two CpG
              islands, complete sequence
          Length = 201575

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    gccctgtgggaattgctttt 433
              ||||||||||||||||||||
Sbjct: 196625 gccctgtgggaattgctttt 196606
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>emb|AL050333.18|HSDJ93K22 Human DNA sequence from clone RP1-93K22 on chromosome 6q14.1-15.3
              Contains the gene for a novel BTB/POZ domain containing
              protein (KIAA1417) and a CpG island, complete sequence
          Length = 113804

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    gccccaaggccggcgaggtc 222
              ||||||||||||||||||||
Sbjct: 107635 gccccaaggccggcgaggtc 107616
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>emb|Y11029.1|ZMFDH Z.mays mRNA for glutathione-dependent formaldehyde dehydrogenase
          Length = 1446

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 209 aggccggcgaggtcctcgtcaaga 232
           ||||||||||||||| ||||||||
Sbjct: 185 aggccggcgaggtccgcgtcaaga 208
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>emb|AL670472.7| Mouse DNA sequence from clone RP23-26M1 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, the gene for ileal
              fatty acid binding protein 6 (gastrotropin) (Fabp6), two
              novel genes, the gene for a novel protein (1810033K05Rik),
              a mitochondrial ribosomal protein 63 (Mrp63) pseudogene,
              the gene for step II splicing factor SLU7 (Slu7-pending),
              the Pttg1 gene for pituitary tumor-transforming 1 and a CpG
              island, complete sequence
          Length = 232609

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 449    aggaagacctctgtgagtct 468
              ||||||||||||||||||||
Sbjct: 232343 aggaagacctctgtgagtct 232324
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>emb|AL772225.5| Mouse DNA sequence from clone RP23-235D17 on chromosome 11 Contains the
              5' end of a novel gene and a novel gene, complete sequence
          Length = 132761

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    aggaagacctctgtgagtct 468
              ||||||||||||||||||||
Sbjct: 131028 aggaagacctctgtgagtct 131047
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>gb|AC174806.2| Mus musculus BAC clone RP24-526I8 from chromosome y, complete sequence
          Length = 155247

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 360   tgagatcgtcaataggttcccagt 383
             |||||| |||||||||||||||||
Sbjct: 45939 tgagattgtcaataggttcccagt 45916
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>gb|U21102.1|U21102 Mesocricetus auratus microsomal triglyceride transfer protein (MTP)
           gene, partial cds
          Length = 1905

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 caggaagacctctgtgagtc 467
           ||||||||||||||||||||
Sbjct: 235 caggaagacctctgtgagtc 254
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 192     ccgcatgccgcgccccaaggccggcgag 219
               ||||||||||||| ||||||||| ||||
Sbjct: 2769446 ccgcatgccgcgcgccaaggccgacgag 2769419
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0050G13
          Length = 150685

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 192   ccgcatgccgcgccccaaggccggcgag 219
             ||||||||||||| ||||||||| ||||
Sbjct: 37674 ccgcatgccgcgcgccaaggccgacgag 37647
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>emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, complete sequence
          Length = 220527

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   gtctgccactctgatctcca 266
             ||||||||||||||||||||
Sbjct: 78134 gtctgccactctgatctcca 78153
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>dbj|AK100093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N23, full
           insert sequence
          Length = 1096

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 192 ccgcatgccgcgccccaaggccggcgag 219
           ||||||||||||| ||||||||| ||||
Sbjct: 568 ccgcatgccgcgcgccaaggccgacgag 595
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>emb|CT573217.3| CH250-279N2, complete sequence
          Length = 146820

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    tcgtgctaaaggaacactat 502
              ||||||||||||||||||||
Sbjct: 138330 tcgtgctaaaggaacactat 138311
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>gb|L47326.1|RCAADHI Rhodobacter sphaeroides alcohol dehydrogenase (adhI) and cytochrome
           c genes, complete cds
          Length = 2127

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 203 gccccaaggccggcgaggtc 222
           ||||||||||||||||||||
Sbjct: 416 gccccaaggccggcgaggtc 435
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>emb|AL645753.11| Mouse DNA sequence from clone CT7-315N12 on chromosome 3, complete
             sequence
          Length = 145594

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 425   attgcttttactgtgttaagggcc 448
             ||||||||||||||||| ||||||
Sbjct: 94008 attgcttttactgtgtttagggcc 94031
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>emb|AL691425.6| Mouse DNA sequence from clone RP23-232E4 on chromosome 3, complete
             sequence
          Length = 42679

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 425   attgcttttactgtgttaagggcc 448
             ||||||||||||||||| ||||||
Sbjct: 29896 attgcttttactgtgtttagggcc 29919


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,193,849
Number of Sequences: 3902068
Number of extensions: 4193849
Number of successful extensions: 86495
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86083
Number of HSP's gapped (non-prelim): 411
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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