ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart24a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome 42 0.34
2gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 0.34
3gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 1.4
4ref|NM_192891.1| Oryza sativa (japonica cultivar-group), predic... 40 1.4
5gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 1.4
6emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 1.4
7gb|AY341856.1| Oryza sativa (japonica cultivar-group) WRKY16 mRN... 40 1.4
8emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 40 1.4
9tpg|BK005014.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 1.4
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
12dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
13gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 1.4
14dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
15dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
16dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
17dbj|AK108745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.4
18gb|AF135485.1|AF135485 Glycine max cytochrome P450 monooxygenase... 40 1.4
19dbj|AB231332.1| Glycine max mRNA for beta-amyrin and sophoradiol... 40 1.4
20gb|AD000002.1|MSGY154 Mycobacterium tuberculosis sequence from c... 40 1.4
21ref|XM_464659.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.4
22gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 38 5.4
23gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 38 5.4
24ref|XM_953516.1| Neurospora crassa OR74A hypothetical protein (N... 38 5.4
25ref|XM_327849.1| Neurospora crassa OR74A hypothetical protein (N... 38 5.4
26gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 38 5.4
27ref|XM_658231.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 5.4
28gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 38 5.4
29ref|XM_809026.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 5.4
30ref|XM_501096.1| Yarrowia lipolytica CLIB122, YALI0B19382g predi... 38 5.4
31emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 38 5.4
32gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 38 5.4
33gb|AC108129.2| Homo sapiens chromosome 5 clone RP11-802E10, comp... 38 5.4
34gb|AF304007.1| Gossypium hirsutum OSMIV and OSMIII pseudogenes, ... 38 5.4
35gb|AC024951.31| Homo sapiens chromosome 8 clone RP11-104C10, com... 38 5.4
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.4
37gb|AC010591.10| Homo sapiens chromosome 5 clone CTC-447K7, compl... 38 5.4
38gb|AC104417.14| Homo sapiens chromosome 8, clone RP11-953B20, co... 38 5.4
39gb|AF250381.1|AF250381 Colletotrichum lagenarium CAD1 (CAD1) gen... 38 5.4
40dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 5.4
41dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D... 38 5.4
42dbj|AK107104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.4
43gb|AY105439.1| Zea mays PCO064225 mRNA sequence 38 5.4
44emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 38 5.4
45gb|M77189.1|RHBCYTC Bradyrhizobium japonicum cytochrome c (cycM)... 38 5.4 
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome
          Length = 1469720

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     caccaccagcagcgggggcgg 117
              |||||||||||||||||||||
Sbjct: 909106 caccaccagcagcgggggcgg 909126
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 81      gcctcgccgacgacgccacca 101
               |||||||||||||||||||||
Sbjct: 3853021 gcctcgccgacgacgccacca 3853001
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    cgacgccaccaccagcagcg 110
             ||||||||||||||||||||
Sbjct: 39864 cgacgccaccaccagcagcg 39883
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>ref|NM_192891.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  cgccgacgacgccaccacca 104
           ||||||||||||||||||||
Sbjct: 181 cgccgacgacgccaccacca 162
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 86      gccgacgacgccaccaccagcagc 109
               ||||||||||||||| ||||||||
Sbjct: 3036890 gccgacgacgccaccgccagcagc 3036913
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14
          Length = 307550

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     gccgacgacgccaccaccagcagc 109
              ||||||||||||||| ||||||||
Sbjct: 181091 gccgacgacgccaccgccagcagc 181114
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>gb|AY341856.1| Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds
          Length = 1395

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  cgccgacgacgccaccacca 104
           ||||||||||||||||||||
Sbjct: 274 cgccgacgacgccaccacca 255
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>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     gccgacgacgccaccaccagcagc 109
              ||||||||||||||| ||||||||
Sbjct: 268919 gccgacgacgccaccgccagcagc 268942
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>tpg|BK005014.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
           transcription factor 11 (WRKY11) gene, complete cds
          Length = 2223

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  cgccgacgacgccaccacca 104
           ||||||||||||||||||||
Sbjct: 181 cgccgacgacgccaccacca 162
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 92       gacgccaccaccagcagcgg 111
                ||||||||||||||||||||
Sbjct: 16711435 gacgccaccaccagcagcgg 16711454
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 85       cgccgacgacgccaccacca 104
                ||||||||||||||||||||
Sbjct: 25005837 cgccgacgacgccaccacca 25005818
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>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0006C01
          Length = 153865

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    cgccgacgacgccaccacca 104
             ||||||||||||||||||||
Sbjct: 78360 cgccgacgacgccaccacca 78341
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      cgacgccaccaccagcagcg 110
               ||||||||||||||||||||
Sbjct: 4280474 cgacgccaccaccagcagcg 4280455



 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 88      cgacgacgccaccaccagc 106
               |||||||||||||||||||
Sbjct: 1222509 cgacgacgccaccaccagc 1222491
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>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0688A04
          Length = 143969

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   cgccgacgacgccaccacca 104
            ||||||||||||||||||||
Sbjct: 5445 cgccgacgacgccaccacca 5426
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>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0047B10
          Length = 158798

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    gacgccaccaccagcagcgg 111
             ||||||||||||||||||||
Sbjct: 60129 gacgccaccaccagcagcgg 60148
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>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1596_C06
          Length = 124721

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     gacgccaccaccagcagcgg 111
              ||||||||||||||||||||
Sbjct: 119574 gacgccaccaccagcagcgg 119593
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>dbj|AK108745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-E09, full
           insert sequence
          Length = 1492

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  cgccgacgacgccaccacca 104
           ||||||||||||||||||||
Sbjct: 213 cgccgacgacgccaccacca 194
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>gb|AF135485.1|AF135485 Glycine max cytochrome P450 monooxygenaseCYP93D1 (CYP93E1) mRNA,
           complete cds
          Length = 1850

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  cgccgacgacgccaccacca 104
           ||||||||||||||||||||
Sbjct: 306 cgccgacgacgccaccacca 287
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>dbj|AB231332.1| Glycine max mRNA for beta-amyrin and sophoradiol 24-hydroxylase,
           complete cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  cgccgacgacgccaccacca 104
           ||||||||||||||||||||
Sbjct: 252 cgccgacgacgccaccacca 233
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>gb|AD000002.1|MSGY154 Mycobacterium tuberculosis sequence from clone y154
          Length = 40221

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 86    gccgacgacgccaccaccagcagc 109
             ||||||||||||||| ||||||||
Sbjct: 23393 gccgacgacgccaccgccagcagc 23370
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>ref|XM_464659.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1762

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 88  cgacgacgccaccaccagc 106
           |||||||||||||||||||
Sbjct: 318 cgacgacgccaccaccagc 300
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 74      acgagctgcctcgccgacgacgc 96
               |||||| ||||||||||||||||
Sbjct: 1780235 acgagcggcctcgccgacgacgc 1780257
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 86      gccgacgacgccaccaccagcag 108
               ||||||||||||| |||||||||
Sbjct: 2881124 gccgacgacgccatcaccagcag 2881146
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>ref|XM_953516.1| Neurospora crassa OR74A hypothetical protein (NCU07564.1) partial
            mRNA
          Length = 1953

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 93   acgccaccaccagcagcgg 111
            |||||||||||||||||||
Sbjct: 1750 acgccaccaccagcagcgg 1732
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>ref|XM_327849.1| Neurospora crassa OR74A hypothetical protein (NCU07564.1) partial
            mRNA
          Length = 1953

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 93   acgccaccaccagcagcgg 111
            |||||||||||||||||||
Sbjct: 1750 acgccaccaccagcagcgg 1732
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 92      gacgccaccaccagcagcg 110
               |||||||||||||||||||
Sbjct: 3266549 gacgccaccaccagcagcg 3266567
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>ref|XM_658231.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5719.2), mRNA
          Length = 330

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 97  caccaccagcagcgggggc 115
           |||||||||||||||||||
Sbjct: 244 caccaccagcagcgggggc 226
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 79      ctgcctcgccgacgacgcc 97
               |||||||||||||||||||
Sbjct: 5540740 ctgcctcgccgacgacgcc 5540758
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>ref|XM_809026.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509455.60) partial mRNA
          Length = 1488

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 85   cgccgacgacgccaccaccagcagcgg 111
            ||||| || ||||||||||||||||||
Sbjct: 984  cgccgccgccgccaccaccagcagcgg 1010
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>ref|XM_501096.1| Yarrowia lipolytica CLIB122, YALI0B19382g predicted mRNA
          Length = 5553

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 97  caccaccagcagcgggggc 115
           |||||||||||||||||||
Sbjct: 316 caccaccagcagcgggggc 298
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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     cgccgacgacgccaccacc 103
              |||||||||||||||||||
Sbjct: 125163 cgccgacgacgccaccacc 125181
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 94      cgccaccaccagcagcggg 112
               |||||||||||||||||||
Sbjct: 1439657 cgccaccaccagcagcggg 1439675
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>gb|AC108129.2| Homo sapiens chromosome 5 clone RP11-802E10, complete sequence
          Length = 105649

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    ctactcctaccaatgtgcc 55
             |||||||||||||||||||
Sbjct: 22380 ctactcctaccaatgtgcc 22398
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>gb|AF304007.1| Gossypium hirsutum OSMIV and OSMIII pseudogenes, complete sequence;
            and osmotin-like protein (OSMII) gene, promoter region
            and complete cds
          Length = 8914

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 95   gccaccaccagcagcgggggcgg 117
            ||||||||||||||||| |||||
Sbjct: 4553 gccaccaccagcagcggaggcgg 4531
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>gb|AC024951.31| Homo sapiens chromosome 8 clone RP11-104C10, complete sequence
          Length = 170023

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     ccaccagcagcgggggcgg 117
              |||||||||||||||||||
Sbjct: 101042 ccaccagcagcgggggcgg 101060
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 88      cgacgacgccaccaccagc 106
               |||||||||||||||||||
Sbjct: 6558905 cgacgacgccaccaccagc 6558887
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>gb|AC010591.10| Homo sapiens chromosome 5 clone CTC-447K7, complete sequence
          Length = 172745

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     ctactcctaccaatgtgcc 55
              |||||||||||||||||||
Sbjct: 107678 ctactcctaccaatgtgcc 107696
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>gb|AC104417.14| Homo sapiens chromosome 8, clone RP11-953B20, complete sequence
          Length = 186063

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     ccaccagcagcgggggcgg 117
              |||||||||||||||||||
Sbjct: 154436 ccaccagcagcgggggcgg 154454
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>gb|AF250381.1|AF250381 Colletotrichum lagenarium CAD1 (CAD1) gene, complete cds
          Length = 730

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 82  cctcgccgacgacgccacc 100
           |||||||||||||||||||
Sbjct: 208 cctcgccgacgacgccacc 226
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 80      tgcctcgccgacgacgcca 98
               |||||||||||||||||||
Sbjct: 1552597 tgcctcgccgacgacgcca 1552579
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>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1307A11
          Length = 131538

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     cgacgacgccaccaccagc 106
              |||||||||||||||||||
Sbjct: 119518 cgacgacgccaccaccagc 119500
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>dbj|AK107104.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-122-A09, full
           insert sequence
          Length = 1762

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 88  cgacgacgccaccaccagc 106
           |||||||||||||||||||
Sbjct: 318 cgacgacgccaccaccagc 300
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>gb|AY105439.1| Zea mays PCO064225 mRNA sequence
          Length = 1193

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 94  cgccaccaccagcagcggg 112
           |||||||||||||||||||
Sbjct: 120 cgccaccaccagcagcggg 138
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 97      caccaccagcagcgggggc 115
               |||||||||||||||||||
Sbjct: 2563809 caccaccagcagcgggggc 2563791
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>gb|M77189.1|RHBCYTC Bradyrhizobium japonicum cytochrome c (cycM) gene, complete cds
          Length = 745

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 80  tgcctcgccgacgacgcca 98
           |||||||||||||||||||
Sbjct: 444 tgcctcgccgacgacgcca 426


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 830,664
Number of Sequences: 3902068
Number of extensions: 830664
Number of successful extensions: 88460
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87498
Number of HSP's gapped (non-prelim): 962
length of query: 117
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 96
effective length of database: 17,151,101,840
effective search space: 1646505776640
effective search space used: 1646505776640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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