ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196910.1| Oryza sativa (japonica cultivar-group) hypothet... 127 4e-26
2gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 127 4e-26
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
5ref|NM_196911.1| Oryza sativa (japonica cultivar-group) hypothet... 90 9e-15
6ref|XM_470948.1| Oryza sativa (japonica cultivar-group), predic... 64 5e-07
7emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4,... 64 5e-07
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
9emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 64 5e-07
10emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4,... 64 5e-07
11ref|NM_196909.1| Oryza sativa (japonica cultivar-group) unknown ... 58 3e-05
12dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.030
13emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 48 0.030
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.030
15emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 48 0.030
16emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chro... 42 1.9
17emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete ch... 42 1.9
18dbj|AB221129.1| Pelotomaculum thermopropionicum odcA, odcB genes... 42 1.9
19dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.9
20gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 7.3
21ref|NM_191278.1| Oryza sativa (japonica cultivar-group), predic... 40 7.3
22ref|XM_477740.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
23gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.3
24emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete ch... 40 7.3
25gb|AY366085.1| Zea mays cultivar B73 PGP1 (pgp1) gene, complete cds 40 7.3
26gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 7.3
27gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.3
28emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.3
29emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.3
30ref|NM_170464.1| Drosophila melanogaster CG7950-RB, transcript v... 40 7.3
31ref|NM_143513.1| Drosophila melanogaster CG7950-RA, transcript v... 40 7.3
32dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 7.3
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
34gb|AC007886.7|AC007886 Drosophila melanogaster, chromosome 3R, r... 40 7.3
35gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, r... 40 7.3
36dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
37gb|AE004698.1| Pseudomonas aeruginosa PAO1, section 259 of 529 o... 40 7.3
38gb|BT003292.1| Drosophila melanogaster GM02245 full insert cDNA 40 7.3
39dbj|AK108853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
40gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 11... 40 7.3 
>ref|NM_196910.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0071K18.17), mRNA
          Length = 1821

 Score =  127 bits (64), Expect = 4e-26
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                       
Query: 185 cggcgggcaggccaccttcacggcggagtgctcccacaccttccacttcaactgcatctc 244
           |||||||||||||| |||||||||||||||||||||||||||||||  |  ||||||| |
Sbjct: 48  cggcgggcaggccatcttcacggcggagtgctcccacaccttccacaaccgctgcatcgc 107

                                                               
Query: 245 cgccagcgtcgcgcacggccacctcgtctgcccgctctgcaacgcgcgctgg 296
           |   | |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 108 ccggaacgtcgcgcacggccgccgcgtctgcccgctctgcaacgcgcgctgg 159
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>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
             sequence
          Length = 149758

 Score =  127 bits (64), Expect = 4e-26
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                         
Query: 185   cggcgggcaggccaccttcacggcggagtgctcccacaccttccacttcaactgcatctc 244
             |||||||||||||| |||||||||||||||||||||||||||||||  |  ||||||| |
Sbjct: 19690 cggcgggcaggccatcttcacggcggagtgctcccacaccttccacaaccgctgcatcgc 19749

                                                                 
Query: 245   cgccagcgtcgcgcacggccacctcgtctgcccgctctgcaacgcgcgctgg 296
             |   | |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 19750 ccggaacgtcgcgcacggccgccgcgtctgcccgctctgcaacgcgcgctgg 19801



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                         
Query: 201   ttcacggcggagtgctcccacaccttccacttcaactgcatctccgccagcgtcgcgcac 260
             ||||||||||||||||| |||   ||||||||| |||||||||||| || |||||||| |
Sbjct: 17037 ttcacggcggagtgctcgcaccagttccacttccactgcatctccggcaccgtcgcgcgc 17096

                                                              
Query: 261   ggccacctcgtctgcccgctctgcaacgcgcgctggcgtgagctgccgt 309
             || | | ||| ||||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 17097 ggacgcatcgcctgcccgctctgccacgcgcggtggcgcgagctcccgt 17145



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 201   ttcacggcggagtgctcccacaccttccacttcaactgcatctccgccagcgt 253
             ||||| ||||| ||||||||||  ||||||||| ||||||||||| |||||||
Sbjct: 31535 ttcaccgcggaatgctcccacaagttccacttccactgcatctcctccagcgt 31587
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  127 bits (64), Expect = 4e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                            
Query: 185      cggcgggcaggccaccttcacggcggagtgctcccacaccttccacttcaactgcatctc 244
                |||||||||||||| |||||||||||||||||||||||||||||||  |  ||||||| |
Sbjct: 16640152 cggcgggcaggccatcttcacggcggagtgctcccacaccttccacaaccgctgcatcgc 16640093

                                                                    
Query: 245      cgccagcgtcgcgcacggccacctcgtctgcccgctctgcaacgcgcgctgg 296
                |   | |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 16640092 ccggaacgtcgcgcacggccgccgcgtctgcccgctctgcaacgcgcgctgg 16640041



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                            
Query: 201      ttcacggcggagtgctcccacaccttccacttcaactgcatctccgccagcgtcgcgcac 260
                ||||||||||||||||| |||   ||||||||| |||||||||||| || |||||||| |
Sbjct: 16642805 ttcacggcggagtgctcgcaccagttccacttccactgcatctccggcaccgtcgcgcgc 16642746

                                                                 
Query: 261      ggccacctcgtctgcccgctctgcaacgcgcgctggcgtgagctgccgt 309
                || | | ||| ||||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 16642745 ggacgcatcgcctgcccgctctgccacgcgcggtggcgcgagctcccgt 16642697



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 201      ttcacggcggagtgctcccacaccttccacttcaactgcatctccgccagcgt 253
                ||||| ||||| ||||||||||  ||||||||| ||||||||||| |||||||
Sbjct: 16628707 ttcaccgcggaatgctcccacaagttccacttccactgcatctcctccagcgt 16628655
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  127 bits (64), Expect = 4e-26
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                            
Query: 185      cggcgggcaggccaccttcacggcggagtgctcccacaccttccacttcaactgcatctc 244
                |||||||||||||| |||||||||||||||||||||||||||||||  |  ||||||| |
Sbjct: 16648793 cggcgggcaggccatcttcacggcggagtgctcccacaccttccacaaccgctgcatcgc 16648734

                                                                    
Query: 245      cgccagcgtcgcgcacggccacctcgtctgcccgctctgcaacgcgcgctgg 296
                |   | |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 16648733 ccggaacgtcgcgcacggccgccgcgtctgcccgctctgcaacgcgcgctgg 16648682



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                            
Query: 201      ttcacggcggagtgctcccacaccttccacttcaactgcatctccgccagcgtcgcgcac 260
                ||||||||||||||||| |||   ||||||||| |||||||||||| || |||||||| |
Sbjct: 16651446 ttcacggcggagtgctcgcaccagttccacttccactgcatctccggcaccgtcgcgcgc 16651387

                                                                 
Query: 261      ggccacctcgtctgcccgctctgcaacgcgcgctggcgtgagctgccgt 309
                || | | ||| ||||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 16651386 ggacgcatcgcctgcccgctctgccacgcgcggtggcgcgagctcccgt 16651338



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 201      ttcacggcggagtgctcccacaccttccacttcaactgcatctccgccagcgt 253
                ||||| ||||| ||||||||||  ||||||||| ||||||||||| |||||||
Sbjct: 16636948 ttcaccgcggaatgctcccacaagttccacttccactgcatctcctccagcgt 16636896
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>ref|NM_196911.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0071K18.16), mRNA
          Length = 1941

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                       
Query: 201 ttcacggcggagtgctcccacaccttccacttcaactgcatctccgccagcgtcgcgcac 260
           ||||||||||||||||| |||   ||||||||| |||||||||||| || |||||||| |
Sbjct: 73  ttcacggcggagtgctcgcaccagttccacttccactgcatctccggcaccgtcgcgcgc 132

                                                            
Query: 261 ggccacctcgtctgcccgctctgcaacgcgcgctggcgtgagctgccgt 309
           || | | ||| ||||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 133 ggacgcatcgcctgcccgctctgccacgcgcggtggcgcgagctcccgt 181
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>ref|XM_470948.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1932

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 201 ttcacggcggagtgctcccacaccttccacttcaactgcatctccgcc 248
           ||||||||||||||||||||| |||||||||||  ||||||| |||||
Sbjct: 277 ttcacggcggagtgctcccactccttccacttcccctgcatcgccgcc 324
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>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete
              sequence
          Length = 139971

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 201    ttcacggcggagtgctcccacaccttccacttcaactgcatctccgcc 248
              ||||||||||||||||||||| |||||||||||  ||||||| |||||
Sbjct: 114131 ttcacggcggagtgctcccactccttccacttcccctgcatcgccgcc 114084
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 201    ttcacggcggagtgctcccacaccttccacttcaactgcatctccgcc 248
              ||||||||||||||||||||| |||||||||||  ||||||| |||||
Sbjct: 114131 ttcacggcggagtgctcccactccttccacttcccctgcatcgccgcc 114084
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>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete
             sequence
          Length = 72636

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 201   ttcacggcggagtgctcccacaccttccacttcaactgcatctccgcc 248
             ||||||||||||||||||||| |||||||||||  ||||||| |||||
Sbjct: 61017 ttcacggcggagtgctcccactccttccacttcccctgcatcgccgcc 60970
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>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
             complete sequence
          Length = 145517

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 201   ttcacggcggagtgctcccacaccttccacttcaactgcatctccgcc 248
             ||||||||||||||||||||| |||||||||||  ||||||| |||||
Sbjct: 45380 ttcacggcggagtgctcccactccttccacttcccctgcatcgccgcc 45333
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>ref|NM_196909.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0071K18.2), mRNA
          Length = 2196

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 201 ttcacggcggagtgctcccacaccttccacttcaactgcatctccgccagcgt 253
           ||||| ||||| ||||||||||  ||||||||| ||||||||||| |||||||
Sbjct: 259 ttcaccgcggaatgctcccacaagttccacttccactgcatctcctccagcgt 311
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 195     gccaccttcacggcggagtgctcccacaccttccac 230
               |||| |||||| || |||||||||||||||||||||
Sbjct: 5415021 gccatcttcaccgccgagtgctcccacaccttccac 5415056
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>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 195   gccaccttcacggcggagtgctcccacaccttccac 230
             |||| |||||| || |||||||||||||||||||||
Sbjct: 87037 gccatcttcaccgccgagtgctcccacaccttccac 87072
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 195     gccaccttcacggcggagtgctcccacaccttccac 230
               |||| |||||| || |||||||||||||||||||||
Sbjct: 5415010 gccatcttcaccgccgagtgctcccacaccttccac 5415045
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>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 195   gccaccttcacggcggagtgctcccacaccttccac 230
             |||| |||||| || |||||||||||||||||||||
Sbjct: 50787 gccatcttcaccgccgagtgctcccacaccttccac 50752
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>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete
             sequence
          Length = 196093

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   agcagcctgcagtttcagaga 126
             |||||||||||||||||||||
Sbjct: 39185 agcagcctgcagtttcagaga 39205
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>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12
          Length = 340900

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   ctcggcggcatggccgccggc 185
             |||||||||||||||||||||
Sbjct: 56544 ctcggcggcatggccgccggc 56524
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>dbj|AB221129.1| Pelotomaculum thermopropionicum odcA, odcB genes for pyruvate
            carboxylase biotin-containing subunit, pyruvate
            carboxylase ATP-binding subunit, complete cds
          Length = 3307

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 172  gcatggccgccggcggcgggc 192
            |||||||||||||||||||||
Sbjct: 2270 gcatggccgccggcggcgggc 2250
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>dbj|AP004576.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01N11, TM0177,
             complete sequence
          Length = 133589

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 201   ttcacggcggagtgctcccacaccttccacttc 233
             ||||| ||||| ||||| |||||||||||||||
Sbjct: 25927 ttcactgcggaatgctctcacaccttccacttc 25895
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 53      cccgttttatgccgccgctgcccc 76
               |||||||| |||||||||||||||
Sbjct: 3159650 cccgttttttgccgccgctgcccc 3159673
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>ref|NM_191278.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 717

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 tgcgccatctgcctcggcggcatg 176
           ||||||||||||||||||| ||||
Sbjct: 349 tgcgccatctgcctcggcgccatg 372
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>ref|XM_477740.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 495

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  gccgccgctgcccccgcgct 82
           ||||||||||||||||||||
Sbjct: 335 gccgccgctgcccccgcgct 316
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     ctcggcggcatggccgccgg 184
               ||||||||||||||||||||
Sbjct: 3345973 ctcggcggcatggccgccgg 3345992
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>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   catcaccagccgccaccgcc 478
             ||||||||||||||||||||
Sbjct: 68582 catcaccagccgccaccgcc 68563
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>gb|AY366085.1| Zea mays cultivar B73 PGP1 (pgp1) gene, complete cds
          Length = 7139

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  catctccgccagcgtcgcgc 258
            ||||||||||||||||||||
Sbjct: 2623 catctccgccagcgtcgcgc 2604
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 454     tgcaacatcaccagccgcca 473
               ||||||||||||||||||||
Sbjct: 1681446 tgcaacatcaccagccgcca 1681427
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 468     ccgccaccgcccgtgcatac 487
               ||||||||||||||||||||
Sbjct: 2908795 ccgccaccgcccgtgcatac 2908814
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>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13
          Length = 348676

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    ctcggcggcatggccgccgg 184
              ||||||||||||||||||||
Sbjct: 232559 ctcggcggcatggccgccgg 232578
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>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14
          Length = 318050

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    ctcggcggcatggccgccgg 184
              ||||||||||||||||||||
Sbjct: 183212 ctcggcggcatggccgccgg 183231
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>ref|NM_170464.1| Drosophila melanogaster CG7950-RB, transcript variant B (CG7950),
           mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 161 ctgcctcggcggcatggccgccgg 184
           ||||||||||||||||||| ||||
Sbjct: 678 ctgcctcggcggcatggccaccgg 701
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>ref|NM_143513.1| Drosophila melanogaster CG7950-RA, transcript variant A (CG7950),
           mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 161 ctgcctcggcggcatggccgccgg 184
           ||||||||||||||||||| ||||
Sbjct: 654 ctgcctcggcggcatggccaccgg 677
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 454     tgcaacatcaccagccgcca 473
               ||||||||||||||||||||
Sbjct: 2746840 tgcaacatcaccagccgcca 2746859
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 153      tgcgccatctgcctcggcggcatg 176
                ||||||||||||||||||| ||||
Sbjct: 31704419 tgcgccatctgcctcggcgccatg 31704442
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>gb|AC007886.7|AC007886 Drosophila melanogaster, chromosome 3R, region 99D-99D, BAC clone
              BACR07A18, complete sequence
          Length = 168469

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 161    ctgcctcggcggcatggccgccgg 184
              ||||||||||||||||||| ||||
Sbjct: 167639 ctgcctcggcggcatggccaccgg 167662
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>gb|AC009733.5|AC009733 Drosophila melanogaster, chromosome 3R, region 99E-99E, BAC clone
             BACR05L15, complete sequence
          Length = 181056

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   ctgcctcggcggcatggccgccgg 184
             ||||||||||||||||||| ||||
Sbjct: 11666 ctgcctcggcggcatggccaccgg 11689
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>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0503C12
          Length = 147180

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 153    tgcgccatctgcctcggcggcatg 176
              ||||||||||||||||||| ||||
Sbjct: 118151 tgcgccatctgcctcggcgccatg 118174
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>gb|AE004698.1| Pseudomonas aeruginosa PAO1, section 259 of 529 of the complete
            genome
          Length = 11466

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 166  tcggcggcatggccgccggcggcg 189
            ||||| ||||||||||||||||||
Sbjct: 6011 tcggcagcatggccgccggcggcg 6034
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>gb|BT003292.1| Drosophila melanogaster GM02245 full insert cDNA
          Length = 1190

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 161 ctgcctcggcggcatggccgccgg 184
           ||||||||||||||||||| ||||
Sbjct: 654 ctgcctcggcggcatggccaccgg 677
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>dbj|AK108853.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A11, full
           insert sequence
          Length = 1150

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 tgcgccatctgcctcggcggcatg 176
           ||||||||||||||||||| ||||
Sbjct: 527 tgcgccatctgcctcggcgccatg 550
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>gb|AE003772.2| Drosophila melanogaster chromosome 3R, section 110 of 118 of the
             complete sequence
          Length = 228443

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   ctgcctcggcggcatggccgccgg 184
             ||||||||||||||||||| ||||
Sbjct: 81207 ctgcctcggcggcatggccaccgg 81230


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,255,840
Number of Sequences: 3902068
Number of extensions: 4255840
Number of successful extensions: 80866
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79858
Number of HSP's gapped (non-prelim): 1008
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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