ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23g05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 168 bits (85), Expect = 6e-39 Identities = 94/97 (96%) Strand = Plus / Minus Query: 201 gcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 260 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 27522071 gcggccgagcaggtacgagtcgcagaagcggcgggactggcacacgttcgggcagtacct 27522012 Query: 261 gcgcaaccaccgcccgccgctggagctctcgcggtgc 297 |||||||||||| |||||||||||||| ||||||||| Sbjct: 27522011 gcgcaaccaccggccgccgctggagctgtcgcggtgc 27521975
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 168 bits (85), Expect = 6e-39 Identities = 94/97 (96%) Strand = Plus / Minus Query: 201 gcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 260 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 91629 gcggccgagcaggtacgagtcgcagaagcggcgggactggcacacgttcgggcagtacct 91570 Query: 261 gcgcaaccaccgcccgccgctggagctctcgcggtgc 297 |||||||||||| |||||||||||||| ||||||||| Sbjct: 91569 gcgcaaccaccggccgccgctggagctgtcgcggtgc 91533
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 168 bits (85), Expect = 6e-39 Identities = 94/97 (96%) Strand = Plus / Minus Query: 201 gcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 260 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141140 gcggccgagcaggtacgagtcgcagaagcggcgggactggcacacgttcgggcagtacct 141081 Query: 261 gcgcaaccaccgcccgccgctggagctctcgcggtgc 297 |||||||||||| |||||||||||||| ||||||||| Sbjct: 141080 gcgcaaccaccggccgccgctggagctgtcgcggtgc 141044
>dbj|AK068794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162N11, full insert sequence Length = 1225 Score = 168 bits (85), Expect = 6e-39 Identities = 94/97 (96%) Strand = Plus / Plus Query: 201 gcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 260 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 197 gcggccgagcaggtacgagtcgcagaagcggcgggactggcacacgttcgggcagtacct 256 Query: 261 gcgcaaccaccgcccgccgctggagctctcgcggtgc 297 |||||||||||| |||||||||||||| ||||||||| Sbjct: 257 gcgcaaccaccggccgccgctggagctgtcgcggtgc 293
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 203 ggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgc 262 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 3595431 ggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgc 3595490 Query: 263 gcaaccaccgcccgccgctggagctctcgcggtgc 297 |||||||||| ||||||||||||||||| |||||| Sbjct: 3595491 gcaaccaccggccgccgctggagctctcccggtgc 3595525 Score = 115 bits (58), Expect = 8e-23 Identities = 85/94 (90%) Strand = Plus / Minus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 24849678 gccgagccggtacgaggcgcagaagcggcgggactggaacacgttcgggcagtacctgcg 24849619 Query: 264 caaccaccgcccgccgctggagctctcgcggtgc 297 |||||||| |||||||||| |||| ||| |||| Sbjct: 24849618 gaaccaccggccgccgctggggctcgcgcagtgc 24849585 Score = 111 bits (56), Expect = 1e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 34707383 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 34707324 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 34707323 ccaccggccgccgctg 34707308
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 203 ggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgc 262 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 140226 ggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgc 140285 Query: 263 gcaaccaccgcccgccgctggagctctcgcggtgc 297 |||||||||| ||||||||||||||||| |||||| Sbjct: 140286 gcaaccaccggccgccgctggagctctcccggtgc 140320
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 203 ggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgc 262 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 76721 ggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgc 76780 Query: 263 gcaaccaccgcccgccgctggagctctcgcggtgc 297 |||||||||| ||||||||||||||||| |||||| Sbjct: 76781 gcaaccaccggccgccgctggagctctcccggtgc 76815
>dbj|AK106854.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B06, full insert sequence Length = 1923 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 203 ggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgc 262 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 1005 ggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgc 1064 Query: 263 gcaaccaccgcccgccgctggagctctcgcggtgc 297 |||||||||| ||||||||||||||||| |||||| Sbjct: 1065 gcaaccaccggccgccgctggagctctcccggtgc 1099
>gb|AY596538.1| Saccharum officinarum clone SCCCRZ2C04A03, complete sequence Length = 1227 Score = 133 bits (67), Expect = 3e-28 Identities = 76/79 (96%) Strand = Plus / Plus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 309 gccgagccggtacgagtcgcagaagcgccgggactggaacacgttcgggcagtacctgcg 368 Query: 264 caaccaccgcccgccgctg 282 |||||||||||||||||| Sbjct: 369 gaaccaccgcccgccgctg 387
>ref|NM_197012.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0055P24.1), mRNA Length = 615 Score = 125 bits (63), Expect = 9e-26 Identities = 75/79 (94%) Strand = Plus / Plus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || Sbjct: 111 gccgagcaggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctccg 170 Query: 264 caaccaccgcccgccgctg 282 ||||||||| ||||||||| Sbjct: 171 caaccaccggccgccgctg 189
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 125 bits (63), Expect = 9e-26 Identities = 75/79 (94%) Strand = Plus / Minus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || Sbjct: 17374037 gccgagcaggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctccg 17373978 Query: 264 caaccaccgcccgccgctg 282 ||||||||| ||||||||| Sbjct: 17373977 caaccaccggccgccgctg 17373959
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 125 bits (63), Expect = 9e-26 Identities = 75/79 (94%) Strand = Plus / Minus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || Sbjct: 3032 gccgagcaggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctccg 2973 Query: 264 caaccaccgcccgccgctg 282 ||||||||| ||||||||| Sbjct: 2972 caaccaccggccgccgctg 2954
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 125 bits (63), Expect = 9e-26 Identities = 75/79 (94%) Strand = Plus / Minus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || Sbjct: 17383077 gccgagcaggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctccg 17383018 Query: 264 caaccaccgcccgccgctg 282 ||||||||| ||||||||| Sbjct: 17383017 caaccaccggccgccgctg 17382999
>ref|XM_466818.1| Oryza sativa (japonica cultivar-group), mRNA Length = 762 Score = 115 bits (58), Expect = 8e-23 Identities = 85/94 (90%) Strand = Plus / Plus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 273 gccgagccggtacgaggcgcagaagcggcgggactggaacacgttcgggcagtacctgcg 332 Query: 264 caaccaccgcccgccgctggagctctcgcggtgc 297 |||||||| |||||||||| |||| ||| |||| Sbjct: 333 gaaccaccggccgccgctggggctcgcgcagtgc 366
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 115 bits (58), Expect = 8e-23 Identities = 85/94 (90%) Strand = Plus / Minus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 10961 gccgagccggtacgaggcgcagaagcggcgggactggaacacgttcgggcagtacctgcg 10902 Query: 264 caaccaccgcccgccgctggagctctcgcggtgc 297 |||||||| |||||||||| |||| ||| |||| Sbjct: 10901 gaaccaccggccgccgctggggctcgcgcagtgc 10868
>dbj|AP006847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa148N02 Length = 36400 Score = 115 bits (58), Expect = 8e-23 Identities = 85/94 (90%) Strand = Plus / Minus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 14677 gccgagccggtacgaggcgcagaagcggcgggactggaacacgttcgggcagtacctgcg 14618 Query: 264 caaccaccgcccgccgctggagctctcgcggtgc 297 |||||||| |||||||||| |||| ||| |||| Sbjct: 14617 gaaccaccggccgccgctggggctcgcgcagtgc 14584
>ref|XM_468337.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 111 bits (56), Expect = 1e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 234 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 293 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 294 ccaccggccgccgctg 309
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 111 bits (56), Expect = 1e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 25231 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 25172 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 25171 ccaccggccgccgctg 25156
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 111 bits (56), Expect = 1e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 64334 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 64275 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 64274 ccaccggccgccgctg 64259
>dbj|AK111446.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-B03, full insert sequence Length = 1587 Score = 111 bits (56), Expect = 1e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 735 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 794 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 795 ccaccggccgccgctg 810
>ref|XM_473175.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 101 bits (51), Expect = 1e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||| |||||||| |||||||||| || |||||| |||||||||||||||||||||| Sbjct: 114 gccgagccggtacgaggcgcagaagcggcgcgactggaacacgttcgggcagtacctgcg 173 Query: 264 caaccaccgcccgccgctg 282 |||||||| ||||||||| Sbjct: 174 gaaccaccggccgccgctg 192
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 101 bits (51), Expect = 1e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||| |||||||| |||||||||| || |||||| |||||||||||||||||||||| Sbjct: 25764180 gccgagccggtacgaggcgcagaagcggcgcgactggaacacgttcgggcagtacctgcg 25764121 Query: 264 caaccaccgcccgccgctg 282 |||||||| ||||||||| Sbjct: 25764120 gaaccaccggccgccgctg 25764102
>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01, complete sequence Length = 127712 Score = 101 bits (51), Expect = 1e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 204 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 263 ||||||| |||||||| |||||||||| || |||||| |||||||||||||||||||||| Sbjct: 87106 gccgagccggtacgaggcgcagaagcggcgcgactggaacacgttcgggcagtacctgcg 87047 Query: 264 caaccaccgcccgccgctg 282 |||||||| ||||||||| Sbjct: 87046 gaaccaccggccgccgctg 87028
>ref|NM_190427.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 639 Score = 95.6 bits (48), Expect = 8e-17 Identities = 69/76 (90%) Strand = Plus / Plus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| || Sbjct: 87 gagcaggtacgagtcgcagaagcggagggactggaacacgttcctgcagtacctgcggaa 146 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 147 ccaccggccgccgctg 162
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 8e-17 Identities = 69/76 (90%) Strand = Plus / Minus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| || Sbjct: 35467506 gagcaggtacgagtcgcagaagcggagggactggaacacgttcctgcagtacctgcggaa 35467447 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 35467446 ccaccggccgccgctg 35467431
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 95.6 bits (48), Expect = 8e-17 Identities = 69/76 (90%) Strand = Plus / Minus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| || Sbjct: 91455 gagcaggtacgagtcgcagaagcggagggactggaacacgttcctgcagtacctgcggaa 91396 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 91395 ccaccggccgccgctg 91380
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 93.7 bits (47), Expect = 3e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 192 ggcggcggtgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgg 251 |||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 75499 ggcggcggcggggctgagcaggtacgagtcgcagaagcggcgggactggaacacgttcct 75440 Query: 252 gcagtacctgcgcaaccac 270 |||||||||||| |||||| Sbjct: 75439 gcagtacctgcggaaccac 75421
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 93.7 bits (47), Expect = 3e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 192 ggcggcggtgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgg 251 |||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 19495 ggcggcggcggggctgagcaggtacgagtcgcagaagcggcgggactggaacacgttcct 19436 Query: 252 gcagtacctgcgcaaccac 270 |||||||||||| |||||| Sbjct: 19435 gcagtacctgcggaaccac 19417
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 93.7 bits (47), Expect = 3e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 192 ggcggcggtgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgg 251 |||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 16228142 ggcggcggcggggctgagcaggtacgagtcgcagaagcggcgggactggaacacgttcct 16228083 Query: 252 gcagtacctgcgcaaccac 270 |||||||||||| |||||| Sbjct: 16228082 gcagtacctgcggaaccac 16228064 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||||||||||||||||||||| | |||||||| |||||||| |||||||||| || Sbjct: 23033142 gagcaggtacgagtcgcagaagaggagggactggaacacgttcctgcagtacctgaagaa 23033201 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 23033202 ccaccggccgccgctg 23033217
>dbj|AK106384.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E04, full insert sequence Length = 1236 Score = 93.7 bits (47), Expect = 3e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 192 ggcggcggtgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgg 251 |||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 294 ggcggcggcggggctgagcaggtacgagtcgcagaagcggcgggactggaacacgttcct 353 Query: 252 gcagtacctgcgcaaccac 270 |||||||||||| |||||| Sbjct: 354 gcagtacctgcggaaccac 372
>ref|XM_476596.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 83.8 bits (42), Expect = 3e-13 Identities = 80/90 (88%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 200 tgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacc 259 ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 59 tgcggccgagccggtacgagtcgcagaagcgccgggactggcagaccttcacgcagtacc 118 Query: 260 tgcgcaac-caccgcccgccgctggagctc 288 | ||| | |||||||||||||| |||||| Sbjct: 119 t-cgccgcgcaccgcccgccgctcgagctc 147
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 83.8 bits (42), Expect = 3e-13 Identities = 80/90 (88%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 200 tgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacc 259 ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 2100268 tgcggccgagccggtacgagtcgcagaagcgccgggactggcagaccttcacgcagtacc 2100209 Query: 260 tgcgcaac-caccgcccgccgctggagctc 288 | ||| | |||||||||||||| |||||| Sbjct: 2100208 t-cgccgcgcaccgcccgccgctcgagctc 2100180 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 tcgatctctctctccctccacggc 90 |||||||||||||| ||||||||| Sbjct: 16792130 tcgatctctctctctctccacggc 16792107
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 83.8 bits (42), Expect = 3e-13 Identities = 80/90 (88%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 200 tgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacc 259 ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 184565 tgcggccgagccggtacgagtcgcagaagcgccgggactggcagaccttcacgcagtacc 184506 Query: 260 tgcgcaac-caccgcccgccgctggagctc 288 | ||| | |||||||||||||| |||||| Sbjct: 184505 t-cgccgcgcaccgcccgccgctcgagctc 184477
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 83.8 bits (42), Expect = 3e-13 Identities = 80/90 (88%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 200 tgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacc 259 ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 56061 tgcggccgagccggtacgagtcgcagaagcgccgggactggcagaccttcacgcagtacc 56002 Query: 260 tgcgcaac-caccgcccgccgctggagctc 288 | ||| | |||||||||||||| |||||| Sbjct: 56001 t-cgccgcgcaccgcccgccgctcgagctc 55973
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||||||||||||||||||||| | |||||||| |||||||| |||||||||| || Sbjct: 95622 gagcaggtacgagtcgcagaagaggagggactggaacacgttcctgcagtacctgaagaa 95681 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 95682 ccaccggccgccgctg 95697
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 266 |||||||||||||||||||||| | |||||||| |||||||| |||||||||| || Sbjct: 137155 gagcaggtacgagtcgcagaagaggagggactggaacacgttcctgcagtacctgaagaa 137214 Query: 267 ccaccgcccgccgctg 282 |||||| ||||||||| Sbjct: 137215 ccaccggccgccgctg 137230
>gb|AC006006.2| Homo sapiens PAC clone RP4-813F11 from 7, complete sequence Length = 136385 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 gccaccacacccagtcttccccc 36 ||||||||||||||||||||||| Sbjct: 91337 gccaccacacccagtcttccccc 91359
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 cggcaggccggcgtcgtcgatc 108 |||||||||||||||||||||| Sbjct: 1681406 cggcaggccggcgtcgtcgatc 1681385
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Minus Query: 67 tcgatctctctctccctccacggcaggccg 96 |||||||||||||| ||||||||| ||||| Sbjct: 4846006 tcgatctctctctctctccacggccggccg 4845977
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Minus Query: 67 tcgatctctctctccctccacggcaggccg 96 |||||||||||||| ||||||||| ||||| Sbjct: 28538 tcgatctctctctctctccacggccggccg 28509
>ref|NM_180043.1| Arabidopsis thaliana unknown protein AT2G42610 transcript variant AT2G42610.2 mRNA, complete cds Length = 989 Score = 42.1 bits (21), Expect = 0.99 Identities = 39/45 (86%) Strand = Plus / Plus Query: 214 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 164 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 208
>ref|NM_129822.2| Arabidopsis thaliana unknown protein AT2G42610 transcript variant AT2G42610.1 mRNA, complete cds Length = 999 Score = 42.1 bits (21), Expect = 0.99 Identities = 39/45 (86%) Strand = Plus / Plus Query: 214 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 164 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 208
>ref|XM_523597.1| PREDICTED: Pan troglodytes similar to amiloride-sensitive cation channel 1, neuronal (degenerin), two different splice products: MDEG1 and MDEG2; ASIC2a/ASIC2b; Amiloride-sensitive cation channel 1 neuronal (degenerin) two different splice products: MDEG1 and MDEG2; Amilorid... (LOC468206), mRNA Length = 2697 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 cagcccgggggcggctgaggcggcg 198 ||||||||||||||| ||||||||| Sbjct: 109 cagcccgggggcggcagaggcggcg 133
>ref|NM_183377.1| Homo sapiens amiloride-sensitive cation channel 1, neuronal (degenerin) (ACCN1), transcript variant 1, mRNA Length = 3470 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 cagcccgggggcggctgaggcggcg 198 ||||||||||||||| ||||||||| Sbjct: 982 cagcccgggggcggcagaggcggcg 1006
>ref|XM_882884.1| PREDICTED: Bos taurus hypothetical protein LOC617497 (LOC617497), mRNA Length = 225 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgggggcggctgaggcggcgg 199 ||||||||||||||||||||| Sbjct: 171 cgggggcggctgaggcggcgg 151
>emb|CR956406.10| Pig DNA sequence from clone CH242-143L3 on chromosome 17, complete sequence Length = 177073 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ctccctccacggcaggccggc 98 ||||||||||||||||||||| Sbjct: 81133 ctccctccacggcaggccggc 81113
>emb|AL834182.1|HSM805478 Homo sapiens mRNA; cDNA DKFZp761M1724 (from clone DKFZp761M1724) Length = 3470 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 cagcccgggggcggctgaggcggcg 198 ||||||||||||||| ||||||||| Sbjct: 982 cagcccgggggcggcagaggcggcg 1006
>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete sequence Length = 96685 Score = 42.1 bits (21), Expect = 0.99 Identities = 39/45 (86%) Strand = Plus / Minus Query: 214 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 37747 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 37703
>gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, complete sequence Length = 184875 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 cagcccgggggcggctgaggcggcg 198 ||||||||||||||| ||||||||| Sbjct: 125753 cagcccgggggcggcagaggcggcg 125729
>dbj|AK164968.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130014L21 product:RNA binding motif protein 5, full insert sequence Length = 3176 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 tctgaggtcaaagcaggagga 143 ||||||||||||||||||||| Sbjct: 1335 tctgaggtcaaagcaggagga 1355
>gb|AC152718.6| Mus musculus BAC clone RP24-432B3 from chromosome 9, complete sequence Length = 174264 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 tctgaggtcaaagcaggagga 143 ||||||||||||||||||||| Sbjct: 81370 tctgaggtcaaagcaggagga 81390
>emb|BX819693.1|CNS0AA0L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2405 Score = 42.1 bits (21), Expect = 0.99 Identities = 39/45 (86%) Strand = Plus / Plus Query: 214 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 141 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 185
>gb|BT003740.1| Arabidopsis thaliana At2g42610 mRNA, complete cds Length = 534 Score = 42.1 bits (21), Expect = 0.99 Identities = 39/45 (86%) Strand = Plus / Plus Query: 214 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 76 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 120
>dbj|AK119048.1| Arabidopsis thaliana At2g42610 mRNA for unknown protein, complete cds, clone: RAFL21-38-B17 Length = 908 Score = 42.1 bits (21), Expect = 0.99 Identities = 39/45 (86%) Strand = Plus / Plus Query: 214 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 164 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 208
>dbj|AK118714.1| Arabidopsis thaliana At2g42610 mRNA for unknown protein, complete cds, clone: RAFL21-02-J18 Length = 944 Score = 42.1 bits (21), Expect = 0.99 Identities = 39/45 (86%) Strand = Plus / Plus Query: 214 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 157 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 201
>gb|AF218765.1|AF218765 Arabidopsis thaliana 177 protein mRNA, complete cds Length = 910 Score = 42.1 bits (21), Expect = 0.99 Identities = 39/45 (86%) Strand = Plus / Plus Query: 214 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 150 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 194
>emb|AL672195.9| Mouse DNA sequence from clone RP23-468E16 on chromosome 9, complete sequence Length = 182503 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 tctgaggtcaaagcaggagga 143 ||||||||||||||||||||| Sbjct: 31092 tctgaggtcaaagcaggagga 31072
>gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH138P04, complete sequence Length = 137697 Score = 42.1 bits (21), Expect = 0.99 Identities = 45/53 (84%) Strand = Plus / Minus Query: 208 agcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 260 |||||||||||||| ||||| || || |||||| ||||||| ||||||||| Sbjct: 23356 agcaggtacgagtcacagaaacgacgtgactggaccacgttcttgcagtacct 23304
>ref|XM_864942.1| PREDICTED: Bos taurus similar to AT rich interactive domain 1B (SWI1-like) isoform 3 (LOC613807), partial mRNA Length = 288 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gcccgggggcggctgaggcggcgg 199 ||||||||||||| |||||||||| Sbjct: 210 gcccgggggcggcggaggcggcgg 233
>emb|X60063.1|GDJUNDG G.domesticus junD gene Length = 2988 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gggcggctgaggcggcggtgcggc 205 |||||||||||| ||||||||||| Sbjct: 726 gggcggctgagggggcggtgcggc 703
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 gcaggccggcgtcgtcgatc 108 |||||||||||||||||||| Sbjct: 3470710 gcaggccggcgtcgtcgatc 3470729
>gb|AC084706.11| Homo sapiens chromosome , clone RP11-91P17, complete sequence Length = 146810 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 1 ctctttccctctcgccaccacacccagt 28 ||||||||||||| | |||||||||||| Sbjct: 125871 ctctttccctctccctaccacacccagt 125844
>emb|CR857916.1| Pongo pygmaeus mRNA; cDNA DKFZp459N1030 (from clone DKFZp459N1030) Length = 4891 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gaggcggcggtgcggccgag 209 |||||||||||||||||||| Sbjct: 20 gaggcggcggtgcggccgag 1
>gb|AE011639.1| Xanthomonas axonopodis pv. citri str. 306, section 17 of 469 of the complete genome Length = 12548 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ccacggcaggccggcgtcgt 103 |||||||||||||||||||| Sbjct: 11999 ccacggcaggccggcgtcgt 11980
>tpg|BK000912.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M305, complete sequence Length = 11131 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 tcgatctctctctccctccacggc 90 |||||||||||||| ||||||||| Sbjct: 5967 tcgatctctctctctctccacggc 5944
>gb|AC034214.5| Homo sapiens chromosome 5 clone CTD-2001E22, complete sequence Length = 108661 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctctcgccaccacacccag 27 |||||||||||||||||||| Sbjct: 45959 cctctcgccaccacacccag 45978
>gb|AC024270.6| Homo sapiens chromosome 15, clone RP11-382A20, complete sequence Length = 184113 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctctcgccaccacacccag 27 |||||||||||||||||||| Sbjct: 134957 cctctcgccaccacacccag 134938
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcaggccggcgtcgtcgatc 108 |||||||||||||||||||| Sbjct: 3669901 gcaggccggcgtcgtcgatc 3669882
>gb|AC026787.5| Homo sapiens chromosome 5 clone CTD-2143L24, complete sequence Length = 146296 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cctctcgccaccacacccag 27 |||||||||||||||||||| Sbjct: 8579 cctctcgccaccacacccag 8560
>gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, complete sequence Length = 188780 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gccaccacacccagtcttcc 33 |||||||||||||||||||| Sbjct: 153064 gccaccacacccagtcttcc 153045
>gb|AE004733.1| Pseudomonas aeruginosa PAO1, section 294 of 529 of the complete genome Length = 11180 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 gcaggccggcgtcgtcgatc 108 |||||||||||||||||||| Sbjct: 6807 gcaggccggcgtcgtcgatc 6826
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 tcgatctctctctccctccacggc 90 |||||||||||||| ||||||||| Sbjct: 132042 tcgatctctctctctctccacggc 132019
>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1103_E04 Length = 111354 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 tcgatctctctctccctccacggc 90 |||||||||||||| ||||||||| Sbjct: 8697 tcgatctctctctctctccacggc 8674
>gb|AC003015.1|AC003015 Human BAC clone GS1-113H23 from 5p15.2, complete sequence Length = 132953 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cctctcgccaccacacccag 27 |||||||||||||||||||| Sbjct: 96106 cctctcgccaccacacccag 96125
>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete sequence Length = 168565 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gccaccacacccagtcttcc 33 |||||||||||||||||||| Sbjct: 141495 gccaccacacccagtcttcc 141476
>gb|DQ180312.1| Fragaria x ananassa clone PBCESTFXA7 SSR marker Length = 961 Score = 40.1 bits (20), Expect = 3.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 207 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 258 |||| ||||||||||||| ||| | |||| ||| |||| |||||||||||| Sbjct: 288 gagccggtacgagtcgcaaaagaggagggattggaacaccttcgggcagtac 339
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cggcaggccggcgtcgtcga 106 |||||||||||||||||||| Sbjct: 926594 cggcaggccggcgtcgtcga 926575 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcaggccggcgtcgtcgatc 108 |||||||||||||||||||| Sbjct: 179708 gcaggccggcgtcgtcgatc 179689
>dbj|AB028210.1| Streptomyces griseus hya and kan genes for hyaluronidase and aminoglycoside 3-N-acetyltransferase, complete cds Length = 4265 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 cgggggcggctgaggcggcggtgc 202 |||||||||| ||||||||||||| Sbjct: 389 cgggggcggcggaggcggcggtgc 366 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,684,194 Number of Sequences: 3902068 Number of extensions: 2684194 Number of successful extensions: 193532 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 192257 Number of HSP's gapped (non-prelim): 1275 length of query: 297 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 275 effective length of database: 17,147,199,772 effective search space: 4715479937300 effective search space used: 4715479937300 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
