ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009529.1| Triticum aestivum clone wr1.pk0122.a3:fis, full i... 609 e-171
2dbj|AK066687.1| Oryza sativa (japonica cultivar-group) cDNA clon... 392 e-106
3dbj|AB188834.1| Oryza sativa (japonica cultivar-group) OsSK1 mRN... 385 e-103
4gb|AY104682.1| Zea mays PCO108968 mRNA sequence 285 8e-74
5dbj|AB188835.1| Oryza sativa (japonica cultivar-group) OsSK2 mRN... 180 3e-42
6dbj|AK109730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
8dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
9dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
11dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
12ref|XM_474060.1| Oryza sativa (japonica cultivar-group), predic... 74 5e-10
13dbj|AB188836.1| Oryza sativa (japonica cultivar-group) OsSK3 mRN... 74 5e-10
14dbj|AK070318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
15gb|BT009514.1| Triticum aestivum clone wr1.pk0099.b12:fis, full ... 72 2e-09
16dbj|AK067948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
17emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
18emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
20gb|BT016432.1| Zea mays clone Contig265 mRNA sequence 50 0.008
21gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.12
22emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.49
23emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 44 0.49
24gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 1.9
25gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.9
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.9
27gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
28gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, compl... 42 1.9
29emb|AL445242.3| Human DNA sequence from clone RP11-321E11 on chr... 42 1.9
30emb|BX897675.1| Neurospora crassa DNA linkage group IV BAC clone... 42 1.9
31emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.9
32gb|AC105032.4| Homo sapiens chromosome 18, clone CTD-2272L2, com... 42 1.9
33emb|BX548078.8| Zebrafish DNA sequence from clone CH211-212C13 i... 42 1.9
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
35gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.9
36gb|AC113474.18| Mus musculus chromosome 5, clone RP23-297J17, co... 40 7.7
37ref|XM_476456.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.7
38gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, com... 40 7.7
39gb|BC035014.2| Homo sapiens KIAA1068 protein, mRNA (cDNA clone M... 40 7.7
40gb|AF550415.2| Citrobacter freundii plasmid pCTX-M3, complete se... 40 7.7
41gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.7
42ref|XM_415920.1| PREDICTED: Gallus gallus similar to KIAA0664 pr... 40 7.7
43gb|AY605181.1| Burkholderia cepacia complex phage BcepC6B, compl... 40 7.7
44ref|NM_015332.2| Homo sapiens NudC domain containing 3 (NUDCD3),... 40 7.7
45gb|AC166550.2| Nectria haematococca clone JGIAYWI-9G7, complete ... 40 7.7
46gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromo... 40 7.7
47emb|Z68220.1|CET20D3 Caenorhabditis elegans Cosmid T20D3, comple... 40 7.7
48gb|AY422214.1| Erwinia amylovora strain LebB66 plasmid pEL60 com... 40 7.7
49gb|AC004453.1| Homo sapiens PAC clone RP5-844F9 from 7, complete... 40 7.7
50emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chro... 40 7.7
51emb|AL445222.9| Human DNA sequence from clone RP11-356B19 on chr... 40 7.7
52gb|AF442964.1| Danio rerio bHLH transcription factor (olig2) mRN... 40 7.7
53emb|AJ488292.1|DRE488292 Danio rerio olig2 gene for bHLH transcr... 40 7.7
54gb|BC065598.1| Danio rerio oligodendrocyte lineage transcription... 40 7.7
55emb|CR858778.1| Pongo pygmaeus mRNA; cDNA DKFZp468N226 (from clo... 40 7.7
56emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 i... 40 7.7
57emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, OR... 40 7.7
58emb|BX936413.10| Zebrafish DNA sequence from clone CH211-48M9 in... 40 7.7
59dbj|AB028991.1| Homo sapiens mRNA for KIAA1068 protein, partial cds 40 7.7
60gb|AE012500.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 7.7
61gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.7
62ref|NM_178100.1| Danio rerio oligodendrocyte lineage transcripti... 40 7.7
63gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosom... 40 7.7
64emb|CR385232.1| Gallus gallus finished cDNA, clone ChEST548g1 40 7.7
65gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 7.7
66dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
67gb|AC146064.4| Pan troglodytes BAC clone RP43-59B14 from chromos... 40 7.7
68gb|AC154797.2| Mus musculus BAC clone RP24-494B10 from chromosom... 40 7.7
69dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
70dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
71emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.7
72gb|BC011673.2| Homo sapiens NudC domain containing 3, mRNA (cDNA... 40 7.7
73gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 7.7
74gb|BC003691.2| Homo sapiens NudC domain containing 3, mRNA (cDNA... 40 7.7
75gb|U27345.1|KPU27345 Klebsiella pneumoniae plasmid pMU407.1 RepC... 40 7.7
76emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chr... 40 7.7
77gb|L12694.1|CHKEN1A01 Gallus gallus engrailed protein (En-1) gen... 40 7.7 
>gb|BT009529.1| Triticum aestivum clone wr1.pk0122.a3:fis, full insert mRNA
           sequence
          Length = 1061

 Score =  609 bits (307), Expect = e-171
 Identities = 343/355 (96%)
 Strand = Plus / Plus

                                                                       
Query: 209 ggtgagcttgcgggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggc 268
           |||||||||||| ||| |||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 7   ggtgagcttgcgtgtcagtgatctggtggggtcgccggccgccgtgcgcgcgcgcggggc 66

                                                                       
Query: 269 caagcccgtcgtcccgctccgcgccaagaaatcgtccggaggaggtcaggacaacttgca 328
           |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 67  caagcccgtcgtcccgctccgcgccaagaaatcgtctggaggaggtcatgagaacttgca 126

                                                                       
Query: 329 taactccgttgacgatgccctcttgttgaagagaaaatcagaagaggttcttttccagtt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 taactccgttgacgatgccctcttgttgaagagaaaatcagaagaggttcttttccagtt 186

                                                                       
Query: 389 gaacggccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaa 448
           |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 187 gaacggtcggtgcatctacctagttggaatgatgggttcggggaaaagtacggtggggaa 246

                                                                       
Query: 449 gatcttggctgaagttttgggttattcgttctttgacagtgataaattggtcgaacaagc 508
           ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 247 gatcttggctgaagttttgggttattcattcttcgacagtgataaattggtcgaacaagc 306

                                                                  
Query: 509 tgttggcatgccttcagttgctcaaattttcaaggttcacagtgaagccttcttc 563
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 307 tgttggcatgccttcagttgctcaaattttcaaggttcatagtgaagccttcttc 361
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>dbj|AK066687.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074E04, full
           insert sequence
          Length = 1356

 Score =  392 bits (198), Expect = e-106
 Identities = 397/462 (85%), Gaps = 6/462 (1%)
 Strand = Plus / Plus

                                                                       
Query: 104 agcaatggaggcgggcgcggggctggcgctgcagtcgagggccgcggggttcggc---tc 160
           ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||   ||
Sbjct: 77  agcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctc 136

                                                                       
Query: 161 cggccgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcg 220
           || |||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |
Sbjct: 137 cgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgag 196

                                                                       
Query: 221 ggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgt 280
           ||||| ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| 
Sbjct: 197 ggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgc 256

                                                                       
Query: 281 cccgctccgcgccaagaaatcgtccggaggaggtcaggacaacttgcataactccgttga 340
           ||||||||| ||||||||||||||||||||   ||| || |  ||||||||||| |||||
Sbjct: 257 cccgctccgtgccaagaaatcgtccggagg---tcatgaaacattgcataactcggttga 313

                                                                       
Query: 341 cgatgccctcttgttgaagagaaaatcagaagaggttcttttccagttgaacggccggtg 400
            || ||||||||| | ||||||||||||||||| ||||| ||| | ||||| || |||||
Sbjct: 314 tgaagccctcttgctaaagagaaaatcagaagaagttctcttctatttgaatggacggtg 373

                                                                       
Query: 401 catctacctagttggaatgatgggttcggggaaaagcacggtggggaagatcttggctga 460
            || ||||||||||||||||||||||| || ||||| || ||||| |||||| || ||||
Sbjct: 374 tatttacctagttggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctga 433

                                                                       
Query: 461 agttttgggttattcgttctttgacagtgataaattggtcgaacaagctgttggcatgcc 520
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 434 agttttgggttattcgttctttgatagtgataaattggtcgaacaagctgtgggcatgcc 493

                                                     
Query: 521 ttcagttgctcaaattttcaaggttcacagtgaagccttctt 562
           |||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 494 ttcagtcgctcaaattttcaaggttcatagtgaagccttctt 535
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>dbj|AB188834.1| Oryza sativa (japonica cultivar-group) OsSK1 mRNA for shikimate
           kinase 1, complete cds
          Length = 927

 Score =  385 bits (194), Expect = e-103
 Identities = 393/458 (85%), Gaps = 6/458 (1%)
 Strand = Plus / Plus

                                                                       
Query: 108 atggaggcgggcgcggggctggcgctgcagtcgagggccgcggggttcggc---tccggc 164
           ||||||||||||| ||||||||||||||||||| |||| ||||||||||||   |||| |
Sbjct: 1   atggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctccgac 60

                                                                       
Query: 165 cgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcgggtc 224
           ||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |||||
Sbjct: 61  cgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgagggtc 120

                                                                       
Query: 225 ggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgtcccg 284
           | ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| ||||
Sbjct: 121 gctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgccccg 180

                                                                       
Query: 285 ctccgcgccaagaaatcgtccggaggaggtcaggacaacttgcataactccgttgacgat 344
           ||||| ||||||||||||||||||||   ||| || |  ||||||||||| ||||| || 
Sbjct: 181 ctccgtgccaagaaatcgtccggagg---tcatgaaacattgcataactcggttgatgaa 237

                                                                       
Query: 345 gccctcttgttgaagagaaaatcagaagaggttcttttccagttgaacggccggtgcatc 404
           ||||||||| | ||||||||||||||||| ||||| ||| | ||||| || ||||| || 
Sbjct: 238 gccctcttgctaaagagaaaatcagaagaagttctcttctatttgaatggacggtgtatt 297

                                                                       
Query: 405 tacctagttggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagtt 464
           ||||||||||||||||||||||| || ||||| || ||||| |||||| || ||||||||
Sbjct: 298 tacctagttggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagtt 357

                                                                       
Query: 465 ttgggttattcgttctttgacagtgataaattggtcgaacaagctgttggcatgccttca 524
           |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 358 ttgggttattcgttctttgatagtgataaattggtcgaacaagctgtgggcatgccttca 417

                                                 
Query: 525 gttgctcaaattttcaaggttcacagtgaagccttctt 562
           || |||||||||||||||||||| ||||||||||||||
Sbjct: 418 gtcgctcaaattttcaaggttcatagtgaagccttctt 455
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>gb|AY104682.1| Zea mays PCO108968 mRNA sequence
          Length = 1305

 Score =  285 bits (144), Expect = 8e-74
 Identities = 263/302 (87%), Gaps = 3/302 (0%)
 Strand = Plus / Plus

                                                                       
Query: 261 cgcggggccaagcccgtcgtcccgctccgcgccaagaaatcgtccggaggaggtcaggac 320
           |||||| ||||||||||||| |||||||| || |||||||| ||||||||   ||| || 
Sbjct: 338 cgcgggtccaagcccgtcgtaccgctccgtgcgaagaaatcatccggagg---tcatgaa 394

                                                                       
Query: 321 aacttgcataactccgttgacgatgccctcttgttgaagagaaaatcagaagaggttctt 380
           ||||||||||||||||||||||| || ||| |||||||||||||||||||||| ||||| 
Sbjct: 395 aacttgcataactccgttgacgaagctctcctgttgaagagaaaatcagaagaagttctg 454

                                                                       
Query: 381 ttccagttgaacggccggtgcatctacctagttggaatgatgggttcggggaaaagcacg 440
           ||| | || |||||  |||| || ||| |||| |||||||||||||| || ||||| || 
Sbjct: 455 ttctacttaaacgggaggtgtatttacttagtgggaatgatgggttctggaaaaagtact 514

                                                                       
Query: 441 gtggggaagatcttggctgaagttttgggttattcgttctttgacagtgataaattggtc 500
           |||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||| || 
Sbjct: 515 gtggggaagatcatgtctgaagtcttgggttattcgttctttgatagtgacaaattagtg 574

                                                                       
Query: 501 gaacaagctgttggcatgccttcagttgctcaaattttcaaggttcacagtgaagccttc 560
           || ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 575 gagcaagctgttggaatgccttcagttgctcaaatattcaaagttcacagtgaagccttc 634

             
Query: 561 tt 562
           ||
Sbjct: 635 tt 636



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 56/66 (84%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                       
Query: 103 gagcaatggaggcggg---cgcggggctggcgctgcagtcgagggccgcggggttcggct 159
           ||||||||||||||||   || ||| |||||||||||| || |||| ||||  |||||||
Sbjct: 192 gagcaatggaggcggggggcgtgggcctggcgctgcagacgcgggcggcggccttcggct 251

                 
Query: 160 ccggcc 165
           ||||||
Sbjct: 252 ccggcc 257
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>dbj|AB188835.1| Oryza sativa (japonica cultivar-group) OsSK2 mRNA for shikimate
           kinase 2, complete cds
          Length = 924

 Score =  180 bits (91), Expect = 3e-42
 Identities = 202/239 (84%)
 Strand = Plus / Plus

                                                                       
Query: 318 gacaacttgcataactccgttgacgatgccctcttgttgaagagaaaatcagaagaggtt 377
           |||| |||||||||||| ||||| || |||||| |||| ||||| ||||||||||| |||
Sbjct: 205 gacagcttgcataactcagttgatgaagccctcctgttaaagaggaaatcagaagaagtt 264

                                                                       
Query: 378 cttttccagttgaacggccggtgcatctacctagttggaatgatgggttcggggaaaagc 437
           || ||| | |||||||| ||||| || ||  |||||||||||||||| || ||||| || 
Sbjct: 265 ctattctacttgaacggacggtgtatttatttagttggaatgatgggctcagggaagagt 324

                                                                       
Query: 438 acggtggggaagatcttggctgaagttttgggttattcgttctttgacagtgataaattg 497
           || || |  ||||| || || ||||||||||||||||| ||||||||||||||||| |||
Sbjct: 325 acagttgcaaagatattagccgaagttttgggttattcattctttgacagtgataagttg 384

                                                                      
Query: 498 gtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggttcacagtgaagc 556
           || |||||||| ||||| |||||||| ||||| ||||| |||||||  |||||||||||
Sbjct: 385 gttgaacaagcagttggaatgccttctgttgcccaaatattcaaggagcacagtgaagc 443
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>dbj|AK109730.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-B12, full
            insert sequence
          Length = 1918

 Score =  180 bits (91), Expect = 3e-42
 Identities = 202/239 (84%)
 Strand = Plus / Plus

                                                                        
Query: 318  gacaacttgcataactccgttgacgatgccctcttgttgaagagaaaatcagaagaggtt 377
            |||| |||||||||||| ||||| || |||||| |||| ||||| ||||||||||| |||
Sbjct: 989  gacagcttgcataactcagttgatgaagccctcctgttaaagaggaaatcagaagaagtt 1048

                                                                        
Query: 378  cttttccagttgaacggccggtgcatctacctagttggaatgatgggttcggggaaaagc 437
            || ||| | |||||||| ||||| || ||  |||||||||||||||| || ||||| || 
Sbjct: 1049 ctattctacttgaacggacggtgtatttatttagttggaatgatgggctcagggaagagt 1108

                                                                        
Query: 438  acggtggggaagatcttggctgaagttttgggttattcgttctttgacagtgataaattg 497
            || || |  ||||| || || ||||||||||||||||| ||||||||||||||||| |||
Sbjct: 1109 acagttgcaaagatattagccgaagttttgggttattcattctttgacagtgataagttg 1168

                                                                       
Query: 498  gtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggttcacagtgaagc 556
            || |||||||| ||||| |||||||| ||||| ||||| |||||||  |||||||||||
Sbjct: 1169 gttgaacaagcagttggaatgccttctgttgcccaaatattcaaggagcacagtgaagc 1227



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 105 gcaatggaggcgggcgcggggctggcgctgcagtcgagggc 145
           |||||||||||  | |||||||||||| |||||||| ||||
Sbjct: 105 gcaatggaggctagagcggggctggcgatgcagtcgcgggc 145
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  143 bits (72), Expect = 7e-31
 Identities = 176/210 (83%), Gaps = 3/210 (1%)
 Strand = Plus / Plus

                                                                            
Query: 104      agcaatggaggcgggcgcggggctggcgctgcagtcgagggccgcggggtt---cggctc 160
                ||||||||||||||||| ||||||||||||||||||| |||| ||||||||   ||||||
Sbjct: 31510265 agcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctc 31510324

                                                                            
Query: 161      cggccgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcg 220
                || |||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |
Sbjct: 31510325 cgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgag 31510384

                                                                            
Query: 221      ggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgt 280
                ||||| ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| 
Sbjct: 31510385 ggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgc 31510444

                                              
Query: 281      cccgctccgcgccaagaaatcgtccggagg 310
                ||||||||| ||||||||||||||||||||
Sbjct: 31510445 cccgctccgtgccaagaaatcgtccggagg 31510474



 Score =  131 bits (66), Expect = 3e-27
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                            
Query: 485      cagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggt 544
                ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 31511438 cagtgataaattggtcgaacaagctgtgggcatgccttcagtcgctcaaattttcaaggt 31511497

                                  
Query: 545      tcacagtgaagccttctt 562
                ||| ||||||||||||||
Sbjct: 31511498 tcatagtgaagccttctt 31511515



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                            
Query: 414      ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 473
                |||||||||||||| || ||||| || ||||| |||||| || |||||||||||||||||
Sbjct: 31511281 ggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagttttgggttat 31511340

                           
Query: 474      tcgttctttga 484
                |||||||||||
Sbjct: 31511341 tcgttctttga 31511351



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 358      agagaaaatcagaagaggttcttttccagttgaacggccggtgcatctacctagttgg 415
                |||||||||||||||| ||||| ||| | ||||| || ||||| || |||||||||||
Sbjct: 31511121 agagaaaatcagaagaagttctcttctatttgaatggacggtgtatttacctagttgg 31511178
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>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0078N11
          Length = 155168

 Score =  143 bits (72), Expect = 7e-31
 Identities = 176/210 (83%), Gaps = 3/210 (1%)
 Strand = Plus / Plus

                                                                          
Query: 104    agcaatggaggcgggcgcggggctggcgctgcagtcgagggccgcggggtt---cggctc 160
              ||||||||||||||||| ||||||||||||||||||| |||| ||||||||   ||||||
Sbjct: 145662 agcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctc 145721

                                                                          
Query: 161    cggccgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcg 220
              || |||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |
Sbjct: 145722 cgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgag 145781

                                                                          
Query: 221    ggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgt 280
              ||||| ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| 
Sbjct: 145782 ggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgc 145841

                                            
Query: 281    cccgctccgcgccaagaaatcgtccggagg 310
              ||||||||| ||||||||||||||||||||
Sbjct: 145842 cccgctccgtgccaagaaatcgtccggagg 145871



 Score =  131 bits (66), Expect = 3e-27
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                          
Query: 485    cagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggt 544
              ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 146835 cagtgataaattggtcgaacaagctgtgggcatgccttcagtcgctcaaattttcaaggt 146894

                                
Query: 545    tcacagtgaagccttctt 562
              ||| ||||||||||||||
Sbjct: 146895 tcatagtgaagccttctt 146912



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                          
Query: 414    ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 473
              |||||||||||||| || ||||| || ||||| |||||| || |||||||||||||||||
Sbjct: 146678 ggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagttttgggttat 146737

                         
Query: 474    tcgttctttga 484
              |||||||||||
Sbjct: 146738 tcgttctttga 146748



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                        
Query: 358    agagaaaatcagaagaggttcttttccagttgaacggccggtgcatctacctagttgg 415
              |||||||||||||||| ||||| ||| | ||||| || ||||| || |||||||||||
Sbjct: 146518 agagaaaatcagaagaagttctcttctatttgaatggacggtgtatttacctagttgg 146575
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>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0431B06
          Length = 154796

 Score =  143 bits (72), Expect = 7e-31
 Identities = 176/210 (83%), Gaps = 3/210 (1%)
 Strand = Plus / Plus

                                                                        
Query: 104  agcaatggaggcgggcgcggggctggcgctgcagtcgagggccgcggggtt---cggctc 160
            ||||||||||||||||| ||||||||||||||||||| |||| ||||||||   ||||||
Sbjct: 825  agcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctc 884

                                                                        
Query: 161  cggccgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcg 220
            || |||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |
Sbjct: 885  cgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgag 944

                                                                        
Query: 221  ggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgt 280
            ||||| ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| 
Sbjct: 945  ggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgc 1004

                                          
Query: 281  cccgctccgcgccaagaaatcgtccggagg 310
            ||||||||| ||||||||||||||||||||
Sbjct: 1005 cccgctccgtgccaagaaatcgtccggagg 1034



 Score =  131 bits (66), Expect = 3e-27
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                        
Query: 485  cagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggt 544
            ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 1998 cagtgataaattggtcgaacaagctgtgggcatgccttcagtcgctcaaattttcaaggt 2057

                              
Query: 545  tcacagtgaagccttctt 562
            ||| ||||||||||||||
Sbjct: 2058 tcatagtgaagccttctt 2075



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                        
Query: 414  ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 473
            |||||||||||||| || ||||| || ||||| |||||| || |||||||||||||||||
Sbjct: 1841 ggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagttttgggttat 1900

                       
Query: 474  tcgttctttga 484
            |||||||||||
Sbjct: 1901 tcgttctttga 1911



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                      
Query: 358  agagaaaatcagaagaggttcttttccagttgaacggccggtgcatctacctagttgg 415
            |||||||||||||||| ||||| ||| | ||||| || ||||| || |||||||||||
Sbjct: 1681 agagaaaatcagaagaagttctcttctatttgaatggacggtgtatttacctagttgg 1738
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  117 bits (59), Expect = 4e-23
 Identities = 122/143 (85%)
 Strand = Plus / Minus

                                                                           
Query: 414     ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 473
               ||||||||||| || ||||| || || || |  ||||| || || |||||||||||||||
Sbjct: 6507397 ggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttat 6507338

                                                                           
Query: 474     tcgttctttgacagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaa 533
               || ||||||||||||||||| ||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 6507337 tcattctttgacagtgataagttggttgaacaagcagttggaatgccttctgttgcccaa 6507278

                                      
Query: 534     attttcaaggttcacagtgaagc 556
               || |||||||  |||||||||||
Sbjct: 6507277 atattcaaggagcacagtgaagc 6507255



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 105     gcaatggaggcgggcgcggggctggcgctgcagtcgagggc 145
               |||||||||||  | |||||||||||| |||||||| ||||
Sbjct: 6508617 gcaatggaggctagagcggggctggcgatgcagtcgcgggc 6508577
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>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score =  117 bits (59), Expect = 4e-23
 Identities = 122/143 (85%)
 Strand = Plus / Minus

                                                                         
Query: 414   ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 473
             ||||||||||| || ||||| || || || |  ||||| || || |||||||||||||||
Sbjct: 23773 ggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttat 23714

                                                                         
Query: 474   tcgttctttgacagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaa 533
             || ||||||||||||||||| ||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 23713 tcattctttgacagtgataagttggttgaacaagcagttggaatgccttctgttgcccaa 23654

                                    
Query: 534   attttcaaggttcacagtgaagc 556
             || |||||||  |||||||||||
Sbjct: 23653 atattcaaggagcacagtgaagc 23631



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 105   gcaatggaggcgggcgcggggctggcgctgcagtcgagggc 145
             |||||||||||  | |||||||||||| |||||||| ||||
Sbjct: 24993 gcaatggaggctagagcggggctggcgatgcagtcgcgggc 24953
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>ref|XM_474060.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 864

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 395 ccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaagatctt 454
           |||||| || ||| ||||||||||||||||||| || ||||  || || |||||||| ||
Sbjct: 273 ccggtgtatttacttagttggaatgatgggttctggcaaaactacagttgggaagatatt 332

                                                        
Query: 455 ggctgaagttttgggttattcgttctttgacagtgataaattggt 499
            |||||||| || || ||||| ||||||||||| ||||| |||||
Sbjct: 333 agctgaagtattaggctattctttctttgacagcgataagttggt 377
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>dbj|AB188836.1| Oryza sativa (japonica cultivar-group) OsSK3 mRNA for shikimate
           kinase 3, complete cds
          Length = 864

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 395 ccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaagatctt 454
           |||||| || ||| ||||||||||||||||||| || ||||  || || |||||||| ||
Sbjct: 273 ccggtgtatttacttagttggaatgatgggttctggcaaaactacagttgggaagatatt 332

                                                        
Query: 455 ggctgaagttttgggttattcgttctttgacagtgataaattggt 499
            |||||||| || || ||||| ||||||||||| ||||| |||||
Sbjct: 333 agctgaagtattaggctattctttctttgacagcgataagttggt 377
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>dbj|AK070318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052O21, full
           insert sequence
          Length = 1167

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 395 ccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaagatctt 454
           |||||| || ||| ||||||||||||||||||| || ||||  || || |||||||| ||
Sbjct: 451 ccggtgtatttacttagttggaatgatgggttctggcaaaactacagttgggaagatatt 510

                                                        
Query: 455 ggctgaagttttgggttattcgttctttgacagtgataaattggt 499
            |||||||| || || ||||| ||||||||||| ||||| |||||
Sbjct: 511 agctgaagtattaggctattctttctttgacagcgataagttggt 555
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>gb|BT009514.1| Triticum aestivum clone wr1.pk0099.b12:fis, full insert mRNA
           sequence
          Length = 1323

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 126/156 (80%)
 Strand = Plus / Plus

                                                                       
Query: 408 ctagttggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttg 467
           |||||||||||||||||||| || ||||  || || ||||||||  | ||||||||  | 
Sbjct: 272 ctagttggaatgatgggttccggcaaaactacagttgggaagataatagctgaagtacta 331

                                                                       
Query: 468 ggttattcgttctttgacagtgataaattggtcgaacaagctgttggcatgccttcagtt 527
           || ||||| |||||||||||||||||  |||| || ||  |||||||||| || || || 
Sbjct: 332 ggctattcattctttgacagtgataagctggttgagcagtctgttggcataccgtcggtg 391

                                               
Query: 528 gctcaaattttcaaggttcacagtgaagccttcttc 563
           ||| | |||||  |||| ||||||||||| ||||||
Sbjct: 392 gctgagatttttcaggtccacagtgaagcattcttc 427
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>dbj|AK067948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123F09, full
            insert sequence
          Length = 2127

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                        
Query: 395  ccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaagatctt 454
            |||||| || ||| ||||||||||||||||||| || ||||  || || |||||||| ||
Sbjct: 969  ccggtgtatttacttagttggaatgatgggttctggcaaaactacagttgggaagatatt 1028

                                             
Query: 455  ggctgaagttttgggttattcgttctttgacag 487
             |||||||| || || ||||| |||||||||||
Sbjct: 1029 agctgaagtattaggctattctttctttgacag 1061
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>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
              complete sequence
          Length = 153643

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                          
Query: 414    ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 473
              |||||||||||||| || ||||  || || |||||||| || |||||||| || || |||
Sbjct: 136285 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 136226

                            
Query: 474    tcgttctttgacag 487
              || |||||||||||
Sbjct: 136225 tctttctttgacag 136212
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>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 414   ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 473
             |||||||||||||| || ||||  || || |||||||| || |||||||| || || |||
Sbjct: 12572 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 12513

                           
Query: 474   tcgttctttgacag 487
             || |||||||||||
Sbjct: 12512 tctttctttgacag 12499
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                            
Query: 414      ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 473
                |||||||||||||| || ||||  || || |||||||| || |||||||| || || |||
Sbjct: 32617551 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 32617492

                              
Query: 474      tcgttctttgacag 487
                || |||||||||||
Sbjct: 32617491 tctttctttgacag 32617478
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>gb|BT016432.1| Zea mays clone Contig265 mRNA sequence
          Length = 1310

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 411 gttggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggt 470
           ||||||||||||||||| || ||||  || || ||||||||  |  | ||||| || |||
Sbjct: 533 gttggaatgatgggttcaggcaaaactacagttgggaagatactatccgaagtgttaggt 592

                                        
Query: 471 tattcgttctttgacagtgataaattggt 499
           ||||| ||||| ||||||||||| |||||
Sbjct: 593 tattccttcttcgacagtgataagttggt 621
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 240     tcgccggccgccgtgcgcgcgcgcggggcca 270
               ||||||||||||| |||||||||| ||||||
Sbjct: 3576630 tcgccggccgccgcgcgcgcgcgccgggcca 3576660
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 110    ggaggcgggcgcggggctggcgctgc 135
              |||||||||||| |||||||||||||
Sbjct: 164399 ggaggcgggcgccgggctggcgctgc 164374
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>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 110   ggaggcgggcgcggggctggcgctgc 135
             |||||||||||| |||||||||||||
Sbjct: 77205 ggaggcgggcgccgggctggcgctgc 77180
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 117    ggcgcggggctggcgctgcag 137
              |||||||||||||||||||||
Sbjct: 243572 ggcgcggggctggcgctgcag 243552
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 253    tgcgcgcgcgcggggccaagc 273
              |||||||||||||||||||||
Sbjct: 109512 tgcgcgcgcgcggggccaagc 109532
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    tgcgcgcgcgcggggccaagc 273
              |||||||||||||||||||||
Sbjct: 591778 tgcgcgcgcgcggggccaagc 591758
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>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
             complete sequence
          Length = 127642

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 476   gttctttgacagtgataaatt 496
             |||||||||||||||||||||
Sbjct: 43924 gttctttgacagtgataaatt 43904
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>gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, complete sequence
          Length = 176328

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 529   ctcaaattttcaaggttcaca 549
             |||||||||||||||||||||
Sbjct: 76402 ctcaaattttcaaggttcaca 76382
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>emb|AL445242.3| Human DNA sequence from clone RP11-321E11 on chromosome 13, complete
             sequence
          Length = 160177

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 529   ctcaaattttcaaggttcaca 549
             |||||||||||||||||||||
Sbjct: 59774 ctcaaattttcaaggttcaca 59794
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>emb|BX897675.1| Neurospora crassa DNA linkage group IV BAC clone B2E7
          Length = 68291

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 335   cgttgacgatgccctcttgtt 355
             |||||||||||||||||||||
Sbjct: 37058 cgttgacgatgccctcttgtt 37038
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    tgcgcgcgcgcggggccaagc 273
              |||||||||||||||||||||
Sbjct: 400350 tgcgcgcgcgcggggccaagc 400330
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>gb|AC105032.4| Homo sapiens chromosome 18, clone CTD-2272L2, complete sequence
          Length = 95865

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 529   ctcaaattttcaaggttcaca 549
             |||||||||||||||||||||
Sbjct: 25808 ctcaaattttcaaggttcaca 25828
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>emb|BX548078.8| Zebrafish DNA sequence from clone CH211-212C13 in linkage group 15,
              complete sequence
          Length = 205316

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 23     atcaccggacacctgccaaaa 43
              |||||||||||||||||||||
Sbjct: 162959 atcaccggacacctgccaaaa 162939
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 476      gttctttgacagtgataaatt 496
                |||||||||||||||||||||
Sbjct: 23763103 gttctttgacagtgataaatt 23763083
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 115     cgggcgcggggctggcgctgc 135
               |||||||||||||||||||||
Sbjct: 1302233 cgggcgcggggctggcgctgc 1302253
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>gb|AC113474.18| Mus musculus chromosome 5, clone RP23-297J17, complete sequence
          Length = 219936

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 501    gaacaagctgttggcatgcc 520
              ||||||||||||||||||||
Sbjct: 139832 gaacaagctgttggcatgcc 139813
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>ref|XM_476456.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1054

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gccgccgtgcgcgcgcgcgg 265
           ||||||||||||||||||||
Sbjct: 46  gccgccgtgcgcgcgcgcgg 27
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>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence
          Length = 200891

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   ggaggtcaggacaacttgca 328
             ||||||||||||||||||||
Sbjct: 63237 ggaggtcaggacaacttgca 63256
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>gb|BC035014.2| Homo sapiens KIAA1068 protein, mRNA (cDNA clone MGC:33478
           IMAGE:4812229), complete cds
          Length = 3604

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 ttgaagagaaaatcagaaga 373
           ||||||||||||||||||||
Sbjct: 335 ttgaagagaaaatcagaaga 354
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>gb|AF550415.2| Citrobacter freundii plasmid pCTX-M3, complete sequence
          Length = 89468

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   cggggaaaagcacggtgggg 446
             ||||||||||||||||||||
Sbjct: 56385 cggggaaaagcacggtgggg 56366
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 240     tcgccggccgccgtgcgcgcgcgc 263
               |||||||| |||||||||||||||
Sbjct: 1576316 tcgccggcggccgtgcgcgcgcgc 1576293
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>ref|XM_415920.1| PREDICTED: Gallus gallus similar to KIAA0664 protein (LOC417675),
            mRNA
          Length = 5549

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  attttcaaggttcacagtga 553
            ||||||||||||||||||||
Sbjct: 2395 attttcaaggttcacagtga 2414
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>gb|AY605181.1| Burkholderia cepacia complex phage BcepC6B, complete genome
          Length = 42415

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  gccggccgccgtgcgcgcgc 261
            ||||||||||||||||||||
Sbjct: 1002 gccggccgccgtgcgcgcgc 1021
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>ref|NM_015332.2| Homo sapiens NudC domain containing 3 (NUDCD3), mRNA
          Length = 3572

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 ttgaagagaaaatcagaaga 373
           ||||||||||||||||||||
Sbjct: 298 ttgaagagaaaatcagaaga 317
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>gb|AC166550.2| Nectria haematococca clone JGIAYWI-9G7, complete sequence
          Length = 45496

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    cgcgagagagccgcagccga 64
             ||||||||||||||||||||
Sbjct: 23954 cgcgagagagccgcagccga 23973
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>gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromosome 7, complete
              sequence
          Length = 163417

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    ttgaagagaaaatcagaaga 373
              ||||||||||||||||||||
Sbjct: 128097 ttgaagagaaaatcagaaga 128078
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>emb|Z68220.1|CET20D3 Caenorhabditis elegans Cosmid T20D3, complete sequence
          Length = 32679

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   ttgaagagaaaatcagaaga 373
             ||||||||||||||||||||
Sbjct: 31475 ttgaagagaaaatcagaaga 31494
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>gb|AY422214.1| Erwinia amylovora strain LebB66 plasmid pEL60 complete sequence
          Length = 60145

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   cggggaaaagcacggtgggg 446
             ||||||||||||||||||||
Sbjct: 53601 cggggaaaagcacggtgggg 53582
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>gb|AC004453.1| Homo sapiens PAC clone RP5-844F9 from 7, complete sequence
          Length = 146500

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   ttgaagagaaaatcagaaga 373
             ||||||||||||||||||||
Sbjct: 16149 ttgaagagaaaatcagaaga 16168
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>emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chromosome X Contains a
             pseudogene similar to part of SLC9A2 (solute carrier
             family 9 (sodium/hydrogen exchanger), isoform 2), complete
             sequence
          Length = 190604

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   agaaaatcagaagaggttct 379
             ||||||||||||||||||||
Sbjct: 84440 agaaaatcagaagaggttct 84421
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>emb|AL445222.9| Human DNA sequence from clone RP11-356B19 on chromosome 9 Contains the 3'
              end of the gene for a novel protein (DKFZp761J1523), the
              SLC2A8 gene for solute carrier family 2, (facilitated
              glucose transporter) member 8 (glucose transporter
              X1)(GLUT8, GLUTX1), the ZNF79 gene for zinc finger protein
              79 (pT7), the RPL12 gene for ribosomal protein L12 (60S
              ribosomal protein L12), the gene for a novel protein, the
              gene for a novel protein (DKFZP434H0820)(FLJ13518,
              FLJ22151, FLJ22298) and four Cpg islands, complete sequence
          Length = 225370

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 529    ctcaaattttcaaggttcacagtg 552
              |||||||||||| |||||||||||
Sbjct: 168543 ctcaaattttcagggttcacagtg 168566
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>gb|AF442964.1| Danio rerio bHLH transcription factor (olig2) mRNA, complete cds
          Length = 1691

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 gagcgcgatgtacggcggagagagcggggccc 204
           ||||| ||| |||||||||| |||||||||||
Sbjct: 556 gagcgagatctacggcggagggagcggggccc 587
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>emb|AJ488292.1|DRE488292 Danio rerio olig2 gene for bHLH transcription factor 2, exons 1-2
          Length = 2072

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 173  gagcgcgatgtacggcggagagagcggggccc 204
            ||||| ||| |||||||||| |||||||||||
Sbjct: 981  gagcgagatctacggcggagggagcggggccc 1012
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>gb|BC065598.1| Danio rerio oligodendrocyte lineage transcription factor 2, mRNA
           (cDNA clone MGC:76800 IMAGE:6964656), complete cds
          Length = 1717

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 gagcgcgatgtacggcggagagagcggggccc 204
           ||||| ||| |||||||||| |||||||||||
Sbjct: 557 gagcgagatctacggcggagggagcggggccc 588
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>emb|CR858778.1| Pongo pygmaeus mRNA; cDNA DKFZp468N226 (from clone DKFZp468N226)
          Length = 3542

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 ttgaagagaaaatcagaaga 373
           ||||||||||||||||||||
Sbjct: 270 ttgaagagaaaatcagaaga 289
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>emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 in linkage group 9,
              complete sequence
          Length = 174709

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 173    gagcgcgatgtacggcggagagagcggggccc 204
              ||||| ||| |||||||||| |||||||||||
Sbjct: 172222 gagcgagatctacggcggagggagcggggccc 172191
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>emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, ORF14, ORF13, ORF12,
             ORF11, ORF10, ORF9, ORF8, ORF7, ORF6, ORF5, ORF4, ORF3,
             tubA gene, ORF2, tubZ gene, ORF1, tubB gene, tubC gene,
             tubD gene, tubE gene, tubF gene, ORF17, ORF18, ORF19,
             ORF20, tubG gene, ORF21, ORF22, ORF23 and ORF24, strain An
             d48
          Length = 82868

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   ggccgcggggttcggctccg 162
             ||||||||||||||||||||
Sbjct: 80426 ggccgcggggttcggctccg 80445
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>emb|BX936413.10| Zebrafish DNA sequence from clone CH211-48M9 in linkage group 5,
             complete sequence
          Length = 87051

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 349   tcttgttgaagagaaaatcagaag 372
             ||||||||||||||||||| ||||
Sbjct: 78535 tcttgttgaagagaaaatctgaag 78512
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>dbj|AB028991.1| Homo sapiens mRNA for KIAA1068 protein, partial cds
          Length = 4793

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 ttgaagagaaaatcagaaga 373
           ||||||||||||||||||||
Sbjct: 231 ttgaagagaaaatcagaaga 250
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>gb|AE012500.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 408
            of 460 of the complete genome
          Length = 10116

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  gccggccgccgtgcgcgcgc 261
            ||||||||||||||||||||
Sbjct: 9299 gccggccgccgtgcgcgcgc 9280
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     cggctccggccgccgccgga 174
               ||||||||||||||||||||
Sbjct: 4261387 cggctccggccgccgccgga 4261406
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>ref|NM_178100.1| Danio rerio oligodendrocyte lineage transcription factor 2 (olig2),
           mRNA
          Length = 1653

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 gagcgcgatgtacggcggagagagcggggccc 204
           ||||| ||| |||||||||| |||||||||||
Sbjct: 556 gagcgagatctacggcggagggagcggggccc 587
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>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence
          Length = 182542

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    ggaggtcaggacaacttgca 328
              ||||||||||||||||||||
Sbjct: 127759 ggaggtcaggacaacttgca 127740
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>emb|CR385232.1| Gallus gallus finished cDNA, clone ChEST548g1
          Length = 895

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 534 attttcaaggttcacagtga 553
           ||||||||||||||||||||
Sbjct: 137 attttcaaggttcacagtga 156
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 242     gccggccgccgtgcgcgcgc 261
               ||||||||||||||||||||
Sbjct: 4573705 gccggccgccgtgcgcgcgc 4573686
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 246     gccgccgtgcgcgcgcgcgg 265
               ||||||||||||||||||||
Sbjct: 1315401 gccgccgtgcgcgcgcgcgg 1315420
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>gb|AC146064.4| Pan troglodytes BAC clone RP43-59B14 from chromosome 7, complete
             sequence
          Length = 186687

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   ttgaagagaaaatcagaaga 373
             ||||||||||||||||||||
Sbjct: 15273 ttgaagagaaaatcagaaga 15254
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>gb|AC154797.2| Mus musculus BAC clone RP24-494B10 from chromosome 17, complete
             sequence
          Length = 140053

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   tttgggttattcgttctttg 483
             ||||||||||||||||||||
Sbjct: 39641 tttgggttattcgttctttg 39660
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>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   gccgccgtgcgcgcgcgcgg 265
             ||||||||||||||||||||
Sbjct: 80236 gccgccgtgcgcgcgcgcgg 80255
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>dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159A01, full
           insert sequence
          Length = 1054

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gccgccgtgcgcgcgcgcgg 265
           ||||||||||||||||||||
Sbjct: 46  gccgccgtgcgcgcgcgcgg 27
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     cttgcgggtcggtgatcagg 234
               ||||||||||||||||||||
Sbjct: 3442270 cttgcgggtcggtgatcagg 3442251
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>gb|BC011673.2| Homo sapiens NudC domain containing 3, mRNA (cDNA clone MGC:14963
           IMAGE:4300217), complete cds
          Length = 3329

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 ttgaagagaaaatcagaaga 373
           ||||||||||||||||||||
Sbjct: 57  ttgaagagaaaatcagaaga 76
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   cggggttcggctccggccgc 167
             ||||||||||||||||||||
Sbjct: 53427 cggggttcggctccggccgc 53446
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>gb|BC003691.2| Homo sapiens NudC domain containing 3, mRNA (cDNA clone MGC:5503
           IMAGE:3453305), complete cds
          Length = 3572

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 ttgaagagaaaatcagaaga 373
           ||||||||||||||||||||
Sbjct: 298 ttgaagagaaaatcagaaga 317
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>gb|U27345.1|KPU27345 Klebsiella pneumoniae plasmid pMU407.1 RepC (repC), RepB (repB) and
            replication initiation protein RepA (repA) genes,
            complete cds
          Length = 2385

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 427  cggggaaaagcacggtgggg 446
            ||||||||||||||||||||
Sbjct: 2198 cggggaaaagcacggtgggg 2179
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>emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chromosome 2, complete
              sequence
          Length = 195221

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    ggaggaggtcaggacaactt 325
              ||||||||||||||||||||
Sbjct: 179764 ggaggaggtcaggacaactt 179783
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>gb|L12694.1|CHKEN1A01 Gallus gallus engrailed protein (En-1) gene, 5' end
          Length = 688

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 ggaggcgggcgcggggctgg 129
           ||||||||||||||||||||
Sbjct: 135 ggaggcgggcgcggggctgg 116


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,125,492
Number of Sequences: 3902068
Number of extensions: 4125492
Number of successful extensions: 92204
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90404
Number of HSP's gapped (non-prelim): 1790
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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