ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23g01 |
|---|---|
| Clone Library Name | barley_pub |
>NCPR_DROME (Q27597) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 679 Score = 33.9 bits (76), Expect = 0.29 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +1 Query: 223 PSAPVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSWDKRFQETCELLKQVRE 387 P + KELA ++E+E+LRS+ + EGKE SW Q+ C + + E Sbjct: 385 PRTHILKELAEYCTDEKEKELLRSMASISPEGKEKYQSW---IQDACRNIVHILE 436
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 32.7 bits (73), Expect = 0.64 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +3 Query: 297 GSRQQGREGVRGLVGQAVSGDVRAAEAGAGARIPGLLPQGLGEAGDV-PAAQGGPR 461 G ++G G+RG +G R A GA P GEAG PA GPR Sbjct: 653 GKGEKGEPGLRGEIGNPGRDGARGAHGAVGAPGPAGATGDRGEAGAAGPAGPAGPR 708
>Y5390_ARATH (Q8GW20) Protein At5g03900 precursor| Length = 523 Score = 32.3 bits (72), Expect = 0.83 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Frame = +1 Query: 220 SPSAPVSKELAAVRAMDEE-----EEILRSVDRDNKEGKEFVDSWDKRFQE 357 SP + ++L + R M ++ + I+ S DRD E D WD+RF+E Sbjct: 468 SPDIALRRKLLSARDMAQKTVIGKDRIVYSTDRDMMEQNYETDEWDRRFKE 518
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 32.3 bits (72), Expect = 0.83 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +3 Query: 297 GSRQQGREGVRGLVGQAVSGDVRAAEAGAGARIPGLLPQGLGEAGDV-PAAQGGPR 461 G ++G G+RG +G R A GA P GEAG PA GPR Sbjct: 653 GKGEKGETGLRGEIGNPGRDGARGAPGAMGAPGPAGATGDRGEAGPAGPAGPAGPR 708
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 31.6 bits (70), Expect = 1.4 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +3 Query: 297 GSRQQGREGVRGLVGQAVSGDVRAAEAGAGARIPGLLPQGLGEAGDV-PAAQGGPR 461 G ++G G+RG +G R A GA P GEAG PA GPR Sbjct: 651 GKGEKGETGLRGDIGSPGRDGARGAPGAIGAPGPAGANGDRGEAGPAGPAGPAGPR 706
>RL26_SCHPO (P78946) 60S ribosomal protein L26| Length = 126 Score = 30.8 bits (68), Expect = 2.4 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%) Frame = +1 Query: 178 KDHFDGSASAVGRPSPSAPVSKELA---AVRAMDEEEEILRSVDRDNKEGKE--FVDSWD 342 K HF G+ S+V R SAP+SKEL +R++ + +V R + +G+E + Sbjct: 16 KAHF-GAPSSVRRVLMSAPLSKELREQYKIRSLPVRRDDQITVIRGSNKGREGKITSVYR 74 Query: 343 KRFQETCELLKQVREPGSRGSYLKDSEKQEMYRLH 447 K+F E + + + G+ D+ K + +LH Sbjct: 75 KKFLLLIERVTREKANGASAPVGIDASKVVITKLH 109
>HSP82_MAIZE (Q08277) Heat shock protein 82| Length = 715 Score = 30.8 bits (68), Expect = 2.4 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = +1 Query: 241 KELAAVRAMDEEEEILRSVDRDNKEGKEFVDSWDKRFQETCELLKQV 381 KE + + +E L+ D D++E K+ + KRF+E C+++K + Sbjct: 520 KEYDGKKLVSATKEGLKLDDEDDEEAKKRREERKKRFEELCKVIKDI 566
>GRPB_RAT (P08462) Submandibular gland secretory Glx-rich protein CB| precursor (GRP-CB) (Contiguous repeat polypeptide) (CRP) Length = 247 Score = 30.8 bits (68), Expect = 2.4 Identities = 20/92 (21%), Positives = 39/92 (42%) Frame = +1 Query: 190 DGSASAVGRPSPSAPVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSWDKRFQETCEL 369 D A V + P ++E A +EE++ +N+E S +++ Q+ Sbjct: 50 DADAENVQEGESAPPANEEPPATSGSEEEQQQQEPTQAENQEPPATSGSEEEQQQQEPTQ 109 Query: 370 LKQVREPGSRGSYLKDSEKQEMYRLHKEDPAT 465 + P + GS + ++Q ++E PAT Sbjct: 110 AENQEPPATSGSEEEQQQQQPTQAENQEPPAT 141
>ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing protein 5| Length = 810 Score = 30.8 bits (68), Expect = 2.4 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 14/83 (16%) Frame = +1 Query: 181 DHFDGSASAVGRPSP---SAPVSKELAAVRA-MDEEEEILRSVDRDNKEGKEFVDSWDKR 348 +HF + + G SP S P + ELA +R +DE ++ + K+ K+ D+W K Sbjct: 623 EHFASGSFSPGT-SPAFLSGPGAAELARLRQELDEANSTIKQWEESWKQAKQACDAWKKE 681 Query: 349 FQET----------CELLKQVRE 387 +E CEL ++ R+ Sbjct: 682 AEEAGERASAAGAECELAREQRD 704
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = +3 Query: 297 GSRQQGREGVRGLVGQAVSGDVRAAEAGAGARIPGLLPQGLGEAGDV-PAAQGGPR 461 G ++G G+RG +G R A GA P GEAG P+ GPR Sbjct: 659 GKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPR 714
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 30.4 bits (67), Expect = 3.2 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%) Frame = +3 Query: 282 DPALRGSRQQGREGVRGLVGQAVSGDVRAAEAGAGARIPGL--LPQGLGEAGD-----VP 440 D L+G G+ G+ G GQA + AG PGL +P G+ GD VP Sbjct: 197 DRGLKGDNGVGQPGLPGAPGQAGAPGPPGLPGPAGLGKPGLDGIPGAPGDKGDSGPPGVP 256 Query: 441 AAQGGP 458 ++G P Sbjct: 257 GSRGEP 262
>Y1900_AQUAE (O67738) Hypothetical protein aq_1900| Length = 168 Score = 30.4 bits (67), Expect = 3.2 Identities = 12/40 (30%), Positives = 25/40 (62%) Frame = +1 Query: 268 DEEEEILRSVDRDNKEGKEFVDSWDKRFQETCELLKQVRE 387 +EE++++R + K F++ DKRFQ+ + + ++RE Sbjct: 22 EEEKQLIRDIAEIKATLKTFMEQTDKRFQDLNQRINELRE 61
>DPOL1_SULSO (P26811) DNA polymerase 1 (EC 2.7.7.7) (DNA polymerase I)| Length = 882 Score = 30.4 bits (67), Expect = 3.2 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 7/95 (7%) Frame = +1 Query: 226 SAPVSKELAAVRAMDEEEE-----ILRSVDRDNKEGKEFVDSWDKRFQETCELLKQVREP 390 SAPV ++ R EE + L VD D K+GK +DK ET ++ Sbjct: 28 SAPVEEKKVVRREWLEEAQENKIYFLLQVDYDGKKGKAVCKLFDK---ETQKIYALYDNT 84 Query: 391 GSRGSYLKDSEKQEMYRLHK--EDPATYTVERLAK 489 G + +L D E ++ ++ K DP+ +E ++K Sbjct: 85 GHKPYFLVDLEPDKVGKIPKIVRDPSFDHIETVSK 119
>TMOD3_HUMAN (Q9NYL9) Tropomodulin-3 (Ubiquitous tropomodulin) (U-Tmod)| Length = 352 Score = 30.4 bits (67), Expect = 3.2 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%) Frame = +1 Query: 232 PVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSWDKR-------FQETCELLKQVREP 390 P K+L + +DE+E + + + K+ + +D D F++ + K P Sbjct: 4 PFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGP 63 Query: 391 GSRGSYLKDSEKQEMYRLHKEDPATYTVERLAKDF 495 R L EK+ + +ED YT E+ K F Sbjct: 64 FDREHLLSYLEKEALEHKDREDYVPYTGEKKGKIF 98
>ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing protein 5| Length = 810 Score = 30.0 bits (66), Expect = 4.1 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 14/83 (16%) Frame = +1 Query: 181 DHFDGSASAVGRPSP---SAPVSKELAAVRA-MDEEEEILRSVDRDNKEGKEFVDSWDKR 348 +HF + + G SP S P + ELA +R +DE ++ + K+ K+ D+W K Sbjct: 623 EHFASGSFSPGT-SPAFLSGPGAAELARLRQELDEANGTIKQWEESWKQAKQACDAWKKE 681 Query: 349 FQET----------CELLKQVRE 387 +E CEL ++ R+ Sbjct: 682 AEEAGERASAAGAECELAREQRD 704
>SURF6_XENLA (Q9I8B0) Surfeit locus protein 6 homolog| Length = 341 Score = 30.0 bits (66), Expect = 4.1 Identities = 19/78 (24%), Positives = 34/78 (43%) Frame = +1 Query: 256 VRAMDEEEEILRSVDRDNKEGKEFVDSWDKRFQETCELLKQVREPGSRGSYLKDSEKQEM 435 V+ D+E + ++ R K+ K+ WDKR + T + ++Q ++ R K K + Sbjct: 260 VKIKDDEGMLKAALKRKEKKQKQREKRWDKRTELTADRMQQRQDKRRRNIMKKKQAKVDK 319 Query: 436 YRLHKEDPATYTVERLAK 489 + E LAK Sbjct: 320 KKNRARKKGRILPEDLAK 337
>RPCH_CALSI (Q23757) Red pigment-concentrating prohormone precursor [Contains:| Red pigment-concentrating hormone (RPCH); RPCH-related peptide] Length = 109 Score = 29.6 bits (65), Expect = 5.4 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = +3 Query: 297 GSRQQGREGVRGLVGQAVSGDVRAAEAGAGARIPGLLPQGLGEAGDV--PAAQGGPRHVH 470 G R G G G VG+AVSG G G++P G GD P H++ Sbjct: 34 GKRAAGASGSNGGVGEAVSG----LHPSVGGAPGGVVPPGSSSPGDSCGPIPVSAVMHIY 89 Query: 471 R 473 R Sbjct: 90 R 90
>FLAB2_TREHY (P80160) Flagellar filament core protein flaB2 (34 kDa core| protein) Length = 285 Score = 29.6 bits (65), Expect = 5.4 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +1 Query: 247 LAAVRAMDEEEEILRSVDRDNKEGKEFVDSWDKRFQETCELLKQVRE 387 LA M + LR +R+N G F+ + + QE+ ++L+++RE Sbjct: 46 LAVSEKMRTQIRGLRQAERNNSSGISFIQTTEGYLQESQDILQRIRE 92
>GRPA_RAT (P08568) Submandibular gland secretory Glx-rich protein CA| precursor (GRP-CA) Length = 246 Score = 29.6 bits (65), Expect = 5.4 Identities = 19/92 (20%), Positives = 39/92 (42%) Frame = +1 Query: 190 DGSASAVGRPSPSAPVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSWDKRFQETCEL 369 D A V +AP ++E A +EE++ +N+E S +++ Q+ Sbjct: 50 DADAENVQEGESAAPANEEPPATSGSEEEQQQQEPTQAENQEPPATSGSEEEQQQQEPTQ 109 Query: 370 LKQVREPGSRGSYLKDSEKQEMYRLHKEDPAT 465 + P + GS + +++ ++ PAT Sbjct: 110 AENQEPPATSGSEEEQQQQEPTQAEDQQPPAT 141
>TMOD2_HUMAN (Q9NZR1) Tropomodulin-2 (Neuronal tropomodulin) (N-Tmod)| Length = 351 Score = 29.6 bits (65), Expect = 5.4 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 7/95 (7%) Frame = +1 Query: 232 PVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSWDKR-------FQETCELLKQVREP 390 P KEL + +DE+E + + + + K+ + +D D F++ + K P Sbjct: 4 PFQKELEKYKNIDEDELLGKLSEEELKQLENVLDDLDPESAMLPAGFRQKDQTQKAATGP 63 Query: 391 GSRGSYLKDSEKQEMYRLHKEDPATYTVERLAKDF 495 R L EK+ + + +ED +T E+ + F Sbjct: 64 FDREHLLMYLEKEALEQKDREDFVPFTGEKKGRVF 98
>RM21_ARATH (Q8L9A0) 50S ribosomal protein L21, mitochondrial precursor| Length = 270 Score = 29.3 bits (64), Expect = 7.1 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = +1 Query: 268 DEEEEILRSVDRDNKEGKEFVDSWDKRFQETCELLKQVREPGSRG----SYLKDSEK 426 DE+EE D D +EG++F DS D + ++V E G LK SE+ Sbjct: 76 DEDEESSEGEDDDEEEGEDFEDSADMEVEREYSPAEKVEEAEEIGYKVMGPLKPSER 132
>FABZ_LEGPH (Q5ZY62) (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase| (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACP dehydrase) Length = 150 Score = 29.3 bits (64), Expect = 7.1 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%) Frame = +1 Query: 223 PSAPVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSW----DKRFQETCELLKQVREP 390 P P+ + + A+ + IL S+ R KEG EF+ + + RF KQV P Sbjct: 53 PGNPIMPGVLMLEALAQACAILASLSRQPKEGHEFLHYFAGIDNARF-------KQVVTP 105 Query: 391 GS--RGSYLKDSEKQEMYRLHKEDPATYTVERLA 486 G R +K++ +R+H E Y ++LA Sbjct: 106 GDQLRLEVRLAGQKRDFWRMHGE---AYIGDKLA 136
>TNNT_DROME (P19351) Troponin T, skeletal muscle (Protein upheld) (Protein| intended thorax) Length = 397 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/65 (24%), Positives = 34/65 (52%) Frame = +1 Query: 319 KEFVDSWDKRFQETCELLKQVREPGSRGSYLKDSEKQEMYRLHKEDPATYTVERLAKDFR 498 KE++ W K+ + + LK+++E ++ + E+Q+M + KE+ ER ++ Sbjct: 54 KEYITEWRKQRSKEEDELKKLKEKQAKRKVTRAEEEQKMAQRKKEEE-----ERRVREAE 108 Query: 499 VMRQR 513 +QR Sbjct: 109 EKKQR 113
>POLG_HPAVS (P14553) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Probable protein P3A; Pr Length = 2230 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%) Frame = +1 Query: 271 EEEEILRSVDRDNKEGKEFVDSWDKRFQETCE--------LLKQVREPGSRGSYLKDSEK 426 EEE++++SVDR G + S D+ T E L V +PGS K ++ Sbjct: 30 EEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGAHQTEPLKTSVDKPGS-----KKTQG 84 Query: 427 QEMYRLHKED 456 ++ + +H D Sbjct: 85 EKFFLIHSAD 94
>IL4RA_PIG (Q863Z5) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) Length = 830 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = +3 Query: 297 GSRQQGREGVRGLVGQAVSGDVRAAEAGAGARIPGLLPQGLGEAGDVP 440 GS Q+GREG+ + +++ D+ E+GA PQG+G++ +P Sbjct: 400 GSFQEGREGIAARLTESLFLDLLGDESGA------FSPQGMGQSCLLP 441
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 28.9 bits (63), Expect = 9.2 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +3 Query: 285 PALRGSR----QQGREGVRGLVGQAVSGDVRAAEAGAGARIPGLLPQGLGEAG-DVPAAQ 449 P RG+R +QG G RGL G+ + GA+ LP G+ G P+ Q Sbjct: 663 PGERGTRGATGKQGARGPRGLAGKRGLRGAGGSRGETGAQGEIGLPGSPGQPGLPGPSGQ 722 Query: 450 GGPRHVHRGAARQGL 494 GP A +QG+ Sbjct: 723 PGPSGPAGTAGKQGV 737
>NCPR_HUMAN (P16435) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 676 Score = 28.9 bits (63), Expect = 9.2 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 223 PSAPVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSW 339 P V ELA + E+E+LR + + EGKE SW Sbjct: 380 PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSW 418
>POLG_HPAVT (P31788) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A)] (Fragment) Length = 839 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%) Frame = +1 Query: 271 EEEEILRSVDRDNKEGKEFVDSWDKRFQETCE--------LLKQVREPGSRGSYLKDSEK 426 EEE++++SVDR G + S D+ T E L V +PGS K ++ Sbjct: 26 EEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGSHQSEPLKTSVDKPGS-----KKTQG 80 Query: 427 QEMYRLHKED 456 ++ + +H D Sbjct: 81 EKFFLIHSAD 90
>POLG_HAVMB (P13901) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Probable protein P3A; Pr Length = 2227 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%) Frame = +1 Query: 271 EEEEILRSVDRDNKEGKEFVDSWDKRFQETCE--------LLKQVREPGSRGSYLKDSEK 426 EEE++++SVDR G + S D+ T E L V +PGS K ++ Sbjct: 26 EEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGSHQVEPLRTSVDKPGS-----KKTQG 80 Query: 427 QEMYRLHKED 456 ++ + +H D Sbjct: 81 EKFFLIHSAD 90
>POLG_HAVLA (P06441) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Probable protein P3A; Pr Length = 2227 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%) Frame = +1 Query: 271 EEEEILRSVDRDNKEGKEFVDSWDKRFQETCE--------LLKQVREPGSRGSYLKDSEK 426 EEE++++SVDR G + S D+ T E L V +PGS K ++ Sbjct: 26 EEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGSHQIEPLKTSVDKPGS-----KKTQG 80 Query: 427 QEMYRLHKED 456 ++ + +H D Sbjct: 81 EKFFLIHSAD 90
>POLG_HAVHM (P08617) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Probable protein P3A; Pr Length = 2227 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%) Frame = +1 Query: 271 EEEEILRSVDRDNKEGKEFVDSWDKRFQETCE--------LLKQVREPGSRGSYLKDSEK 426 EEE++++SVDR G + S D+ T E L V +PGS K ++ Sbjct: 26 EEEQMIQSVDRTAVTGASYFTSVDQSSVHTAEVGSHQVEPLRTSVDKPGS-----KKTQG 80 Query: 427 QEMYRLHKED 456 ++ + +H D Sbjct: 81 EKFFLIHSAD 90
>SMC4_CAEEL (Q20060) Structural maintenance of chromosome 4 (Protein smc-4)| Length = 1549 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/77 (24%), Positives = 39/77 (50%) Frame = +1 Query: 226 SAPVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSWDKRFQETCELLKQVREPGSRGS 405 +AP E + +E E++L N+E + +D ++KR + E K+++E ++ S Sbjct: 436 AAPEKAERKIAKCQEEVEQLLEIEKTANEEADKNLDEFEKRSEAPKEEQKKIQETWAQKS 495 Query: 406 YLKDSEKQEMYRLHKED 456 + + E R+ +ED Sbjct: 496 NEFNKVRGEA-RIARED 511
>ASSY_AQUAE (O67213) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 401 Score = 28.9 bits (63), Expect = 9.2 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +1 Query: 187 FDGSASAVGRPSPSAPVSKELAAVRAMDEEEEILRSVDRDNKEGKEFVDSW 339 + GS S VGR SP++ +ELA D+ ++I GK F W Sbjct: 346 YKGSVSVVGRRSPNSLYVEELATYSEKDQFDQI---------AGKHFTKVW 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.131 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,589,659 Number of Sequences: 219361 Number of extensions: 795899 Number of successful extensions: 4359 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4350 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
