>DHN4_HORVU (P12949) Dehydrin DHN4 (B18)|
          Length = 225

 Score =  105 bits (262), Expect = 9e-23
 Identities = 51/99 (51%), Positives = 51/99 (51%)
 Frame = +3

Query: 90  MEYQGQQHGRVDEYGNPXXXXXXXXXXXXXXXXXXXXXXXXXYQPMRDEHQTGRGILHRX 269
           MEYQGQQHGRVDEYGNP                         YQPMRDEHQTGRGILHR 
Sbjct: 1   MEYQGQQHGRVDEYGNPVAGHGVGTGMGTHGGVGTGAAAGGHYQPMRDEHQTGRGILHRS 60

Query: 270 XXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGGHGDQQHN 386
                   EDDGMG              LPGGHGDQQHN
Sbjct: 61  GSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGHGDQQHN 99

>DHN3_HORVU (P12948) Dehydrin DHN3 (B17)|
          Length = 161

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 34/93 (36%), Positives = 37/93 (39%)
 Frame = +3

Query: 102 GQQHGRVDEYGNPXXXXXXXXXXXXXXXXXXXXXXXXXYQPMRDEHQTGRGILHRXXXXX 281
           G    RVDEYGNP                         +QP R+EH+ G GIL R     
Sbjct: 4   GHATNRVDEYGNPVAGHGVGTGMGAHGGVGTGAAAGGHFQPTREEHKAG-GILQRSGSSS 62

Query: 282 XXXXEDDGMGXXXXXXXXXXXXXXLPGGHGDQQ 380
               EDDGMG              LPGGHGDQQ
Sbjct: 63  SSSSEDDGMGGRRKKGLKDKIKEKLPGGHGDQQ 95

>DHN1_MAIZE (P12950) Dehydrin DHN1 (M3) (RAB-17 protein)|
          Length = 168

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 41/115 (35%), Positives = 46/115 (40%), Gaps = 17/115 (14%)
 Frame = +3

Query: 90  MEY--QGQQ-HGR---VDEYGNPXXXXXXXXXXXXXXXXXX-----------XXXXXXXY 218
           MEY  QGQ+ HGR   VD+YGNP                                    +
Sbjct: 1   MEYGQQGQRGHGRTGHVDQYGNPVGGVEHGTGGMRHGTGTTGGMGQLGEHGGAGMGGGQF 60

Query: 219 QPMRDEHQTGRGILHRXXXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGGHGDQQH 383
           QP R+EH+TG GILHR         EDDGMG              LPGGH D QH
Sbjct: 61  QPAREEHKTG-GILHRSGSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGHKDDQH 114

>DHR21_ORYSA (P12253) Water stress-inducible protein Rab21|
          Length = 172

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 40/123 (32%), Positives = 47/123 (38%), Gaps = 25/123 (20%)
 Frame = +3

Query: 90  MEYQGQQHG----RVDEYGNPXXXXX--------------------XXXXXXXXXXXXXX 197
           ME+QGQ HG    RVDEYGNP                                       
Sbjct: 1   MEHQGQ-HGHVTSRVDEYGNPVGTGAGHGQMGTAGMGTHGTTGGMGTHGTTGGMGTHGTT 59

Query: 198 XXXXXXYQPMRDEHQTGRGILHRXXXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGGH-GD 374
                 +QPMR+EH+TG G+L R         EDDGMG              LPGG+ G+
Sbjct: 60  GTGGGQFQPMREEHKTG-GVLQRSGSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGE 118

Query: 375 QQH 383
           QQH
Sbjct: 119 QQH 121

>DH16B_ORYSA (P22911) Dehydrin Rab16B|
          Length = 164

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 35/109 (32%), Positives = 40/109 (36%), Gaps = 13/109 (11%)
 Frame = +3

Query: 96  YQGQQHG----RVDEYGNPXXXXXXXXXXXX--------XXXXXXXXXXXXXYQPMRDEH 239
           YQGQ HG    RVD YGNP                                 +QP R++H
Sbjct: 4   YQGQ-HGYGADRVDVYGNPVGAGQYGGGATAPGGGHGAMGMGGHAGAGAGGQFQPAREDH 62

Query: 240 QTGRGILHRX-XXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGGHGDQQH 383
           +TG GILHR          EDDGMG              LPGG+    H
Sbjct: 63  KTG-GILHRSGSSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGNNH 110

>DHN2_HORVU (P12952) Dehydrin DHN2 (B9)|
          Length = 143

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 34/107 (31%), Positives = 40/107 (37%), Gaps = 9/107 (8%)
 Frame = +3

Query: 90  MEYQGQQH----GRVDEYGNPXXXXXXXXXX-XXXXXXXXXXXXXXXYQPMRDEHQTGRG 254
           MEYQGQ       +V+EYG P                           QP RD+H+T  G
Sbjct: 1   MEYQGQTGHATTDKVEEYGQPVAGHGGATGGPTGTHGAAAAAAGTGQLQPTRDDHKTD-G 59

Query: 255 ILHRXXXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGG-HGD---QQH 383
           +L R         EDDG+G              LPGG H D   QQH
Sbjct: 60  VLRRSGSSSSSSSEDDGVGGRRKKGMKEKIKEKLPGGAHKDAAGQQH 106

>DH16C_ORYSA (P22912) Dehydrin Rab16C|
          Length = 164

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 34/102 (33%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
 Frame = +3

Query: 96  YQGQQHG----RVDEYGNPXXXXXXXXXXX------XXXXXXXXXXXXXXYQPMRDEHQT 245
           YQGQ HG    RVD YGNP                               +QP+++EH+T
Sbjct: 4   YQGQ-HGYGADRVDVYGNPVAGQYGGGATAPGGGHGVMGMGGHHAGAGGQFQPVKEEHKT 62

Query: 246 GRGILHRX-XXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGGH 368
           G GILHR          EDDGMG              LPGG+
Sbjct: 63  G-GILHRSGSSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGN 103

>DHR15_WHEAT (Q00742) Dehydrin Rab15|
          Length = 149

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 34/103 (33%), Positives = 35/103 (33%), Gaps = 5/103 (4%)
 Frame = +3

Query: 90  MEYQGQQHG---RVDEYGNPXXXXXXXXXXXXXXXXXXXXXXXXXYQPMRDEHQTGRGIL 260
           ME+QGQ      RVDEYGNP                           P        R IL
Sbjct: 1   MEFQGQHDNPANRVDEYGNPFPLAGAWGERTRSRHRRAV--------PGPQGRAQDRWIL 52

Query: 261 HRX-XXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGGHGD-QQH 383
           HR          EDDGMG              LPGGH D QQH
Sbjct: 53  HRSGSSSSSSSSEDDGMGGRRKKGMKEKIKEKLPGGHKDNQQH 95

>DHN1_HORVU (P12951) Dehydrin DHN1 (B8)|
          Length = 139

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 30/96 (31%), Positives = 35/96 (36%), Gaps = 4/96 (4%)
 Frame = +3

Query: 90  MEYQGQQHG----RVDEYGNPXXXXXXXXXXXXXXXXXXXXXXXXXYQPMRDEHQTGRGI 257
           MEYQGQ HG    +V+EYG P                          Q  RD H+T  G+
Sbjct: 1   MEYQGQ-HGHATDKVEEYGQPVAGHGGFTGGPTGTHGAAGVGGAQL-QATRDGHKTD-GV 57

Query: 258 LHRXXXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGG 365
           L R         EDDG+G              LPGG
Sbjct: 58  LRRSGSSSSSSSEDDGVGGRRKKGMKEKIKEKLPGG 93

>DH16D_ORYSA (P22913) Dehydrin Rab16D|
          Length = 151

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 29/98 (29%), Positives = 36/98 (36%), Gaps = 5/98 (5%)
 Frame = +3

Query: 90  MEYQGQQHG----RVDEYGNPXXXXXXXXXXXXXXXXXXXXXXXXXYQPMRDEHQTGRGI 257
           MEYQGQ  G    R DE+GNP                          +P R++ +T  G+
Sbjct: 1   MEYQGQHGGHASSRADEHGNPAVTTGNAPTGMGAGHIQ---------EPAREDKKTD-GV 50

Query: 258 LHRX-XXXXXXXXEDDGMGXXXXXXXXXXXXXXLPGGH 368
           L R          EDDGMG              LPGG+
Sbjct: 51  LRRSGSSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGN 88

>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 427 PAPAEPTGSRVTLG*PGWEPLTAPTDSKGTLGWPAP 534
           P P  P G++   G PG E L  P   KG+ G P P
Sbjct: 51  PGPQGPPGAQGIRGFPGPEGLPGPKGQKGSQGPPGP 86

>CCNL1_BRARE (Q7ZVX0) Cyclin-L1|
          Length = 498

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = +2

Query: 422 HGRHRRNLRAAGSHWD------DRDGSH*RHLRTARAHWDGRH 532
           H +H++    +G HWD      DR   H R+ R +R+H    H
Sbjct: 451 HIKHKQERSGSGHHWDHRDRERDRSRDHGRNKRQSRSHSGHSH 493

>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)|
          Length = 1758

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +1

Query: 427 PAPAEPTGSRVTLG*PGWEPLTAPTDSKGTLGWPAP 534
           P P  P G++   G PG E L  P   KG  G P P
Sbjct: 50  PGPQGPPGTQGIRGFPGPEGLAGPKGLKGAQGPPGP 85

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +1

Query: 427  PAPAEPTGSRVTLG*PGWEPLTAPTDSKGTLGWPAPGHMAPR 552
            P P  P GS   LG PG   +  P   KG+ G  +PG M PR
Sbjct: 1438 PGPPGPIGS---LGHPGPPGVAGPLGQKGSKG--SPGSMGPR 1474

>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 463  LG*PGWEPLTAPTDSKGTLGWP-APGHMAPR 552
            +G PG+  +  P   KG  GWP APG   P+
Sbjct: 1253 MGPPGFPGINGPKGDKGNQGWPGAPGVPGPK 1283

>PER3_HUMAN (P56645) Period circadian protein 3 (hPER3)|
          Length = 1201

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 524  HPSVPLLSVGAVSGSHPGHPSVTLLPVGS 438
            HP+   LS+G      P HP+ T+L  GS
Sbjct: 1020 HPTASTLSMGLPPSRTPSHPTATVLSTGS 1048

>PAQR4_HUMAN (Q8N4S7) Progestin and adipoQ receptor family member 4 (Progestin|
           and adipoQ receptor family member IV)
          Length = 273

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +1

Query: 424 WPAPAEPTGSRVTLG*PGWEPLTAPTDSK--GTLGWPAPGHM 543
           W  PA   G  V  G  GW  LTAP+ S      GW A   +
Sbjct: 144 WLRPAALVGYTVLSGVAGWRALTAPSTSARLRAFGWQAAARL 185


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,907,053
Number of Sequences: 219361
Number of extensions: 834389
Number of successful extensions: 2883
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2873
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)