Clone Name | bart23f11 |
---|---|
Clone Library Name | barley_pub |
>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 Score = 284 bits (726), Expect = 1e-76 Identities = 143/152 (94%), Positives = 143/152 (94%) Frame = +1 Query: 103 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXXKNGYGDYLIEEEE 282 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTP KNGYGDYLIEEEE Sbjct: 1 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPGAASAAAGAKNGYGDYLIEEEE 60 Query: 283 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 462 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP Sbjct: 61 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 120 Query: 463 CTYSKGTCKPALYTALFSTASFLLGAITSLVS 558 CTYSKGTCKPALYTALFSTASFLLGAITSLVS Sbjct: 121 CTYSKGTCKPALYTALFSTASFLLGAITSLVS 152
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 214 bits (545), Expect = 1e-55 Identities = 110/153 (71%), Positives = 123/153 (80%), Gaps = 2/153 (1%) Frame = +1 Query: 106 AILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXX-XXXXKNGYGDYLIEEEE 282 AIL +LGTEILIPVC VIGI FA+ QW +VSKVK++ KNGY DYLIEEEE Sbjct: 3 AILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEE 62 Query: 283 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 462 G+NDHNVVVKCAEIQ AISEGATSFLFT Y+YVG+FMV FA +IFLFLGS+EGFST Q Sbjct: 63 GINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQA 122 Query: 463 CTYSK-GTCKPALYTALFSTASFLLGAITSLVS 558 C+Y K TCKPAL TA+FST SFLLG +TSLVS Sbjct: 123 CSYDKTKTCKPALATAIFSTVSFLLGGVTSLVS 155
>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1| (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3) Length = 770 Score = 206 bits (524), Expect = 4e-53 Identities = 102/160 (63%), Positives = 127/160 (79%), Gaps = 5/160 (3%) Frame = +1 Query: 94 LTAMAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXX----KNGYGD 261 + A A+L EL TEIL+P+C VIGI F++ QW++VS+VK+T KNGYGD Sbjct: 1 MVAPALLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGD 60 Query: 262 YLIEEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEG 441 YLIEEEEG+ND +VV KCAEIQTAISEGATSFLFT Y+YVG+FM+ FAA+IF+FLGS+EG Sbjct: 61 YLIEEEEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEG 120 Query: 442 FSTKGQPCTY-SKGTCKPALYTALFSTASFLLGAITSLVS 558 FST +PCTY + TCKPAL TA FST +F+LGA+TS++S Sbjct: 121 FSTDNKPCTYDTTRTCKPALATAAFSTIAFVLGAVTSVLS 160
>HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 704 Score = 39.3 bits (90), Expect = 0.008 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%) Frame = +1 Query: 310 KCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGS--IEGFSTKGQPCTYSKGT 483 K EI +AISEGA +FL Y+ + +F+ A +I L L + EGF+ Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGFN------------ 89 Query: 484 CKPALYTALFSTASFLLGAITSLVS 558 +YTA+ +F+ GA+ S +S Sbjct: 90 --DGIYTAI----AFVSGALISCIS 108
>HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 704 Score = 39.3 bits (90), Expect = 0.008 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%) Frame = +1 Query: 310 KCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGS--IEGFSTKGQPCTYSKGT 483 K EI +AISEGA +FL Y+ + +F+ A +I L L + EGF+ Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGFN------------ 89 Query: 484 CKPALYTALFSTASFLLGAITSLVS 558 +YTA+ +F+ GA+ S +S Sbjct: 90 --DGIYTAI----AFVSGALISCIS 108
>UPS4_ARATH (Q9ZQ88) Ureide permease 4 (AtUPS4)| Length = 401 Score = 35.8 bits (81), Expect = 0.085 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +1 Query: 379 VGMFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGTCKPALYTAL--FSTASFLLGAITSL 552 +G+F+ +FA I +T Q T KG K +YTA FS A FL+ I +L Sbjct: 234 IGLFITLFAGISLSLFSPAFNLATNDQWSTLPKGVPKLVVYTAFFYFSIAGFLISLILNL 293 Query: 553 V 555 + Sbjct: 294 I 294
>HPPA2_RHOPA (Q8KY01) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 725 Score = 33.1 bits (74), Expect = 0.55 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +1 Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSI 435 EI AI +GA ++L Y+ + + V A +IF FLG + Sbjct: 40 EIAGAIQQGAAAYLARQYKTIAIVGAVLAILIFFFLGGL 78
>HPPA_CLOTE (Q898Q9) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 673 Score = 32.3 bits (72), Expect = 0.94 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = +1 Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 429 EI I +GA +FL T Y+Y+ F+V+ I+ +F+G Sbjct: 38 EIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVG 74
>TAKT_DROME (Q9VBV3) Protein takeout precursor| Length = 249 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 385 MFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGTCKPALYTALFSTAS 525 MF + FA ++ L + F +PC Y G C L LFS S Sbjct: 1 MFAIAFAVVLCLLVSVDAKFPEDPKPCKYGDGECIMKLCNTLFSENS 47
>HPPA_FUSNN (Q8RHJ2) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 671 Score = 32.0 bits (71), Expect = 1.2 Identities = 22/85 (25%), Positives = 39/85 (45%) Frame = +1 Query: 304 VVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGT 483 + K EI AI EGA +FL Y+ + +F++V A + +F+ Sbjct: 36 IPKVEEITAAIREGAMAFLAAEYKILIVFVIVVAVALGIFI------------------- 76 Query: 484 CKPALYTALFSTASFLLGAITSLVS 558 ++ + +F+LGAITS ++ Sbjct: 77 -------SVPTAGAFILGAITSAIA 94
>YLA1_HUMAN (Q9UM01) Y+L amino acid transporter 1 (y(+)L-type amino acid| transporter 1) (y+LAT-1) (Y+LAT1) (Monocyte amino acid permease 2) (MOP-2) Length = 511 Score = 30.0 bits (66), Expect = 4.6 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +1 Query: 358 LFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGTCKPALYTALFS 516 +FT + + + V+ A I+ L G+ F + +++ G ALY+ALFS Sbjct: 186 IFTYAKVLALIAVIVAGIVRLGQGASTHFENSFEGSSFAVGDIALALYSALFS 238
>UPS5_ARATH (Q93Z75) Ureide permease 5 (AtUPS5)| Length = 413 Score = 29.6 bits (65), Expect = 6.1 Identities = 22/81 (27%), Positives = 31/81 (38%) Frame = +1 Query: 271 EEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFST 450 EEEE NV A A+ + VG+ + FA + F + +T Sbjct: 206 EEEEEKEMENVKEGSAAFLIALENKRAIKVLGKSMVVGLGITFFAGLSFSLFSPLFNLAT 265 Query: 451 KGQPCTYSKGTCKPALYTALF 513 Q T +G K +YTA F Sbjct: 266 NDQWHTLKQGVPKLIVYTAFF 286
>HPPA_BRAJA (Q89K83) Pyrophosphate-energized proton pump (EC 3.6.1.1)| (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Membrane-bound proton-translocating pyrophosphatase) Length = 706 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 429 EI A+ EGA ++L Y +G+ +V ++ FLG Sbjct: 37 EIAAAVREGAQAYLRRQYTTIGIVGIVIFVLLVYFLG 73
>PRDM1_HUMAN (O75626) PR domain zinc finger protein 1 (PR domain-containing| protein 1) (Beta-interferon gene positive-regulatory domain I-binding factor) (BLIMP-1) (Positive regulatory domain I-binding factor 1) (PRDI-binding factor 1) (PRDI-BF1) Length = 789 Score = 29.3 bits (64), Expect = 7.9 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -1 Query: 458 WPFVLNPSIDPRKRKIIAAKTTMNIPTYWYMVKRNDVAPSEMAVW 324 W +NP+ PR++ + A + MNI Y+Y +K A E+ VW Sbjct: 122 WMRYVNPAHSPREQNLAACQNGMNI--YFYTIKPIP-ANQELLVW 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,929,696 Number of Sequences: 219361 Number of extensions: 747212 Number of successful extensions: 2483 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2412 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2475 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)