ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane pro... 284 1e-76
2AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane pro... 214 1e-55
3AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane pr... 206 4e-53
4HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6.... 39 0.008
5HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6.... 39 0.008
6UPS4_ARATH (Q9ZQ88) Ureide permease 4 (AtUPS4) 36 0.085
7HPPA2_RHOPA (Q8KY01) Pyrophosphate-energized proton pump (EC 3.6... 33 0.55
8HPPA_CLOTE (Q898Q9) Pyrophosphate-energized proton pump (EC 3.6.... 32 0.94
9TAKT_DROME (Q9VBV3) Protein takeout precursor 32 1.2
10HPPA_FUSNN (Q8RHJ2) Pyrophosphate-energized proton pump (EC 3.6.... 32 1.2
11YLA1_HUMAN (Q9UM01) Y+L amino acid transporter 1 (y(+)L-type ami... 30 4.6
12UPS5_ARATH (Q93Z75) Ureide permease 5 (AtUPS5) 30 6.1
13HPPA_BRAJA (Q89K83) Pyrophosphate-energized proton pump (EC 3.6.... 30 6.1
14PRDM1_HUMAN (O75626) PR domain zinc finger protein 1 (PR domain-... 29 7.9

>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC|
           3.6.1.1) (Pyrophosphate-energized inorganic
           pyrophosphatase) (H(+)-PPase)
          Length = 762

 Score =  284 bits (726), Expect = 1e-76
 Identities = 143/152 (94%), Positives = 143/152 (94%)
 Frame = +1

Query: 103 MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXXKNGYGDYLIEEEE 282
           MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTP         KNGYGDYLIEEEE
Sbjct: 1   MAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPGAASAAAGAKNGYGDYLIEEEE 60

Query: 283 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 462
           GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP
Sbjct: 61  GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 120

Query: 463 CTYSKGTCKPALYTALFSTASFLLGAITSLVS 558
           CTYSKGTCKPALYTALFSTASFLLGAITSLVS
Sbjct: 121 CTYSKGTCKPALYTALFSTASFLLGAITSLVS 152



to top

>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC|
           3.6.1.1) (Pyrophosphate-energized inorganic
           pyrophosphatase) (H(+)-PPase) (Vacuolar
           H(+)-pyrophosphatase)
          Length = 764

 Score =  214 bits (545), Expect = 1e-55
 Identities = 110/153 (71%), Positives = 123/153 (80%), Gaps = 2/153 (1%)
 Frame = +1

Query: 106 AILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXX-XXXXKNGYGDYLIEEEE 282
           AIL +LGTEILIPVC VIGI FA+ QW +VSKVK++           KNGY DYLIEEEE
Sbjct: 3   AILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEE 62

Query: 283 GLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQP 462
           G+NDHNVVVKCAEIQ AISEGATSFLFT Y+YVG+FMV FA +IFLFLGS+EGFST  Q 
Sbjct: 63  GINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQA 122

Query: 463 CTYSK-GTCKPALYTALFSTASFLLGAITSLVS 558
           C+Y K  TCKPAL TA+FST SFLLG +TSLVS
Sbjct: 123 CSYDKTKTCKPALATAIFSTVSFLLGGVTSLVS 155



to top

>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1|
           (EC 3.6.1.1) (Pyrophosphate-energized inorganic
           pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton
           pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3)
          Length = 770

 Score =  206 bits (524), Expect = 4e-53
 Identities = 102/160 (63%), Positives = 127/160 (79%), Gaps = 5/160 (3%)
 Frame = +1

Query: 94  LTAMAILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPXXXXXXXXX----KNGYGD 261
           + A A+L EL TEIL+P+C VIGI F++ QW++VS+VK+T              KNGYGD
Sbjct: 1   MVAPALLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGD 60

Query: 262 YLIEEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEG 441
           YLIEEEEG+ND +VV KCAEIQTAISEGATSFLFT Y+YVG+FM+ FAA+IF+FLGS+EG
Sbjct: 61  YLIEEEEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEG 120

Query: 442 FSTKGQPCTY-SKGTCKPALYTALFSTASFLLGAITSLVS 558
           FST  +PCTY +  TCKPAL TA FST +F+LGA+TS++S
Sbjct: 121 FSTDNKPCTYDTTRTCKPALATAAFSTIAFVLGAVTSVLS 160



to top

>HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 704

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +1

Query: 310 KCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGS--IEGFSTKGQPCTYSKGT 483
           K  EI +AISEGA +FL   Y+ + +F+   A +I L L +   EGF+            
Sbjct: 42  KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGFN------------ 89

Query: 484 CKPALYTALFSTASFLLGAITSLVS 558
               +YTA+    +F+ GA+ S +S
Sbjct: 90  --DGIYTAI----AFVSGALISCIS 108



to top

>HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 704

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +1

Query: 310 KCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGS--IEGFSTKGQPCTYSKGT 483
           K  EI +AISEGA +FL   Y+ + +F+   A +I L L +   EGF+            
Sbjct: 42  KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGSEGFN------------ 89

Query: 484 CKPALYTALFSTASFLLGAITSLVS 558
               +YTA+    +F+ GA+ S +S
Sbjct: 90  --DGIYTAI----AFVSGALISCIS 108



to top

>UPS4_ARATH (Q9ZQ88) Ureide permease 4 (AtUPS4)|
          Length = 401

 Score = 35.8 bits (81), Expect = 0.085
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 379 VGMFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGTCKPALYTAL--FSTASFLLGAITSL 552
           +G+F+ +FA I           +T  Q  T  KG  K  +YTA   FS A FL+  I +L
Sbjct: 234 IGLFITLFAGISLSLFSPAFNLATNDQWSTLPKGVPKLVVYTAFFYFSIAGFLISLILNL 293

Query: 553 V 555
           +
Sbjct: 294 I 294



to top

>HPPA2_RHOPA (Q8KY01) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 725

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSI 435
           EI  AI +GA ++L   Y+ + +   V A +IF FLG +
Sbjct: 40  EIAGAIQQGAAAYLARQYKTIAIVGAVLAILIFFFLGGL 78



to top

>HPPA_CLOTE (Q898Q9) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 673

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 429
           EI   I +GA +FL T Y+Y+  F+V+   I+ +F+G
Sbjct: 38  EIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVG 74



to top

>TAKT_DROME (Q9VBV3) Protein takeout precursor|
          Length = 249

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 385 MFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGTCKPALYTALFSTAS 525
           MF + FA ++ L +     F    +PC Y  G C   L   LFS  S
Sbjct: 1   MFAIAFAVVLCLLVSVDAKFPEDPKPCKYGDGECIMKLCNTLFSENS 47



to top

>HPPA_FUSNN (Q8RHJ2) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 671

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/85 (25%), Positives = 39/85 (45%)
 Frame = +1

Query: 304 VVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGT 483
           + K  EI  AI EGA +FL   Y+ + +F++V A  + +F+                   
Sbjct: 36  IPKVEEITAAIREGAMAFLAAEYKILIVFVIVVAVALGIFI------------------- 76

Query: 484 CKPALYTALFSTASFLLGAITSLVS 558
                  ++ +  +F+LGAITS ++
Sbjct: 77  -------SVPTAGAFILGAITSAIA 94



to top

>YLA1_HUMAN (Q9UM01) Y+L amino acid transporter 1 (y(+)L-type amino acid|
           transporter 1) (y+LAT-1) (Y+LAT1) (Monocyte amino acid
           permease 2) (MOP-2)
          Length = 511

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 358 LFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQPCTYSKGTCKPALYTALFS 516
           +FT  + + +  V+ A I+ L  G+   F    +  +++ G    ALY+ALFS
Sbjct: 186 IFTYAKVLALIAVIVAGIVRLGQGASTHFENSFEGSSFAVGDIALALYSALFS 238



to top

>UPS5_ARATH (Q93Z75) Ureide permease 5 (AtUPS5)|
          Length = 413

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/81 (27%), Positives = 31/81 (38%)
 Frame = +1

Query: 271 EEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFST 450
           EEEE     NV    A    A+       +      VG+ +  FA + F     +   +T
Sbjct: 206 EEEEEKEMENVKEGSAAFLIALENKRAIKVLGKSMVVGLGITFFAGLSFSLFSPLFNLAT 265

Query: 451 KGQPCTYSKGTCKPALYTALF 513
             Q  T  +G  K  +YTA F
Sbjct: 266 NDQWHTLKQGVPKLIVYTAFF 286



to top

>HPPA_BRAJA (Q89K83) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 706

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 319 EIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLG 429
           EI  A+ EGA ++L   Y  +G+  +V   ++  FLG
Sbjct: 37  EIAAAVREGAQAYLRRQYTTIGIVGIVIFVLLVYFLG 73



to top

>PRDM1_HUMAN (O75626) PR domain zinc finger protein 1 (PR domain-containing|
           protein 1) (Beta-interferon gene positive-regulatory
           domain I-binding factor) (BLIMP-1) (Positive regulatory
           domain I-binding factor 1) (PRDI-binding factor 1)
           (PRDI-BF1)
          Length = 789

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -1

Query: 458 WPFVLNPSIDPRKRKIIAAKTTMNIPTYWYMVKRNDVAPSEMAVW 324
           W   +NP+  PR++ + A +  MNI  Y+Y +K    A  E+ VW
Sbjct: 122 WMRYVNPAHSPREQNLAACQNGMNI--YFYTIKPIP-ANQELLVW 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,929,696
Number of Sequences: 219361
Number of extensions: 747212
Number of successful extensions: 2483
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2475
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top