Clone Information

BLAST Search Result

Clone Name	bart23f07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	217	1e-56
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	204	1e-52
3	RL5_ARATH (P49227) 60S ribosomal protein L5	199	3e-51
4	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	198	6e-51
5	RL5_CAEEL (P49405) 60S ribosomal protein L5	160	1e-39
6	RL5_DUNSA (O22608) 60S ribosomal protein L5	160	2e-39
7	RL5_STYCL (Q26481) 60S ribosomal protein L5	158	8e-39
8	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	157	1e-38
9	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	157	1e-38
10	RL5_CHICK (P22451) 60S ribosomal protein L5	157	2e-38
11	RL5_HUMAN (P46777) 60S ribosomal protein L5	156	3e-38
12	RL5_HELAN (O65353) 60S ribosomal protein L5	154	9e-38
13	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	154	9e-38
14	RL5_RAT (P09895) 60S ribosomal protein L5	154	1e-37
15	RL5_MOUSE (P47962) 60S ribosomal protein L5	152	4e-37
16	RL5_BOMMO (O76190) 60S ribosomal protein L5	151	8e-37
17	RL5_ANOGA (O44248) 60S ribosomal protein L5	149	3e-36
18	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	141	1e-33
19	RL5_PIG (Q95276) 60S ribosomal protein L5 (Fragment)	140	2e-33
20	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	134	2e-31
21	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	119	4e-27
22	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	119	4e-27
23	RL18_METTH (O26130) 50S ribosomal protein L18P	58	1e-08
24	RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18)...	55	1e-07
25	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	54	3e-07
26	RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)	53	5e-07
27	RL18_ARCFU (O28373) 50S ribosomal protein L18P	52	1e-06
28	RL18_METAC (Q8TRS8) 50S ribosomal protein L18P	51	2e-06
29	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	49	6e-06
30	RL18_SULSO (Q9UX88) 50S ribosomal protein L18P	48	1e-05
31	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	47	2e-05
32	RL18_THEVO (Q97BV7) 50S ribosomal protein L18P	47	2e-05
33	RL18_METVA (P14033) 50S ribosomal protein L18P	47	3e-05
34	RL18_SULAC (O05640) 50S ribosomal protein L18P	45	8e-05
35	RL18_METJA (P54044) 50S ribosomal protein L18P	44	2e-04
36	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	41	0.002
37	RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P	40	0.003
38	RL18_THEAC (Q9HIS6) 50S ribosomal protein L18P	40	0.003
39	RL18_PYRHO (O59438) 50S ribosomal protein L18P	36	0.063
40	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	36	0.063
41	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	36	0.063
42	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	35	0.14
43	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	33	0.41
44	LIPA_HALSA (Q9HN78) Probable lipoyl synthase (EC 2.8.1.-) (Lipoi...	32	1.2
45	RIC8_DROPS (Q29IC2) Synembryn (Protein Ric-8)	31	2.0
46	VA31_VACCV (P24760) Protein A31	30	3.5
47	SECA_BACSU (P28366) Preprotein translocase secA subunit	30	4.5
48	RIC8_DROME (Q9W358) Synembryn (Protein Ric-8)	30	4.5
49	LRMP_MOUSE (Q60664) Lymphoid-restricted membrane protein (Jaw1 p...	29	5.9
50	ZDHC7_RAT (Q923G5) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Zin...	29	5.9
51	ZDHC7_MOUSE (Q91WU6) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Z...	29	5.9
52	ZDHC7_HUMAN (Q9NXF8) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Z...	29	5.9
53	YCBB_ECOLI (P22525) Hypothetical protein ycbB	29	5.9
54	RL18_THEMA (Q9ZAE3) 50S ribosomal protein L18	29	5.9
55	ZDHC3_MOUSE (Q8R173) Palmitoyltransferase ZDHHC3 (EC 2.3.1.-) (Z...	29	7.7
56	ZDHC3_HUMAN (Q9NYG2) Palmitoyltransferase ZDHHC3 (EC 2.3.1.-) (Z...	29	7.7
57	RL18_BACST (P09415) 50S ribosomal protein L18 (BL22)	29	7.7
58	VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21	29	7.7

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  217 bits (553), Expect = 1e-56
 Identities = 108/133 (81%), Positives = 113/133 (84%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK QKT AY               TDYRAR+RLTNQDKNKYNTPKYRFVVRFTNKD+TA
Sbjct: 4   FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLK R LDQEYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGN 123

Query: 448 VEATGEDFSVEPS 486
           +EATGED+ VEP+
Sbjct: 124 IEATGEDYYVEPA 136

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  204 bits (518), Expect = 1e-52
 Identities = 105/133 (78%), Positives = 109/133 (81%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK QKT AY               TDYRAR+RLTNQDKNKYNTPKYRFV   TNKD+TA
Sbjct: 7   FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITA 63

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVL  R LDQEYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGN 123

Query: 448 VEATGEDFSVEPS 486
           VEATGED+ VEP+
Sbjct: 124 VEATGEDYYVEPA 136

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  199 bits (506), Expect = 3e-51
 Identities = 99/135 (73%), Positives = 110/135 (81%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           MVFVK+ K+ AY               TDYRAR+RL NQDKNKYNTPKYRFVVRFTNKD+
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
            AQIV A+IAGDIV A+AY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK  ++D EYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 442 GNVEATGEDFSVEPS 486
           GNVEATGEDFSVEP+
Sbjct: 121 GNVEATGEDFSVEPT 135

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  198 bits (504), Expect = 6e-51
 Identities = 97/135 (71%), Positives = 111/135 (82%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M F K QKT+AY               TDYRAR+RL NQDKNKYNTPKYRFVVR +NKD+
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
           TAQI+ A+IAGD+V+A+AYSHELP+YGLEVGLTNYAAAYCTGLLLARRVLK  ++D EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 442 GNVEATGEDFSVEPS 486
           GNVEATGED+SVEP+
Sbjct: 121 GNVEATGEDYSVEPA 135

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  160 bits (406), Expect = 1e-39
 Identities = 83/133 (62%), Positives = 95/133 (71%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M  VK  K +AY               TDY AR RLT QDKNKYNTPKYR +VR TNKDV
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
            AQ+ Y+ I GD+V+A+AYSHELPRYGL+VGLTNYAAAY TGLLLARR LK   LD  Y+
Sbjct: 61  VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120

Query: 442 GNVEATGEDFSVE 480
           G+ E TGED++VE
Sbjct: 121 GHEELTGEDYNVE 133

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  160 bits (405), Expect = 2e-39
 Identities = 82/134 (61%), Positives = 95/134 (70%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M +VK  KT  Y               TDYRARLRL  QDKNKYNT KYR VVRF+NK+V
Sbjct: 1   MGYVKVVKTSPYFSRYQVKYRRRRQGKTDYRARLRLVRQDKNKYNTHKYRLVVRFSNKNV 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
           T QIVY+TI GD+VMAAAYS ELP YGL+VGLTNY+AAYC GLL+ARR+L   +L   Y+
Sbjct: 61  TCQIVYSTIQGDVVMAAAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLADTYK 120

Query: 442 GNVEATGEDFSVEP 483
           G  E  GED++VEP
Sbjct: 121 GQEEPDGEDYNVEP 134

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  158 bits (399), Expect = 8e-39
 Identities = 79/131 (60%), Positives = 92/131 (70%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VRFTNKD+  
Sbjct: 2   FVKVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+V+ AAY+HELPRYG++VGLTNYAAAYCTGLLL+RR+L    LD+ YEG 
Sbjct: 62  QIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQ 121

Query: 448 VEATGEDFSVE 480
            E  G++F VE
Sbjct: 122 TEIDGDEFYVE 132

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  157 bits (398), Expect = 1e-38
 Identities = 77/131 (58%), Positives = 94/131 (71%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    LD+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQ 121

Query: 448 VEATGEDFSVE 480
           VE TG++++VE
Sbjct: 122 VEVTGDEYNVE 132

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  157 bits (397), Expect = 1e-38
 Identities = 77/131 (58%), Positives = 94/131 (71%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    LD+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQ 121

Query: 448 VEATGEDFSVE 480
           VE TG++++VE
Sbjct: 122 VEVTGDEYNVE 132

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  157 bits (396), Expect = 2e-38
 Identities = 77/131 (58%), Positives = 94/131 (71%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    LD+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQ 121

Query: 448 VEATGEDFSVE 480
           VE TG++++VE
Sbjct: 122 VEVTGDEYNVE 132

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  156 bits (394), Expect = 3e-38
 Identities = 76/131 (58%), Positives = 94/131 (71%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    +D+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQ 121

Query: 448 VEATGEDFSVE 480
           VE TG++++VE
Sbjct: 122 VEVTGDEYNVE 132

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  154 bits (390), Expect = 9e-38
 Identities = 76/134 (56%), Positives = 95/134 (70%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M FVK  K + Y               TDY AR RL  QDKNKYNTPKYR VVRF+N+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDI 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
           T Q+ Y+ I GD ++ AAY+HELP+YG++VGLTNYAAAYCTGLLLAR++L    LD+ Y 
Sbjct: 61  TCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYI 120

Query: 442 GNVEATGEDFSVEP 483
           G+ E TGE+F+V+P
Sbjct: 121 GSTEVTGEEFNVKP 134

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  154 bits (390), Expect = 9e-38
 Identities = 75/131 (57%), Positives = 94/131 (71%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+++ AAY+H+LP+YG++VGLTNYAAAYCTGLLLARR+L    +D+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQ 121

Query: 448 VEATGEDFSVE 480
           VE TG++++VE
Sbjct: 122 VEVTGDEYNVE 132

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  154 bits (389), Expect = 1e-37
 Identities = 75/131 (57%), Positives = 93/131 (70%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    +D+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQ 121

Query: 448 VEATGEDFSVE 480
           VE  G++++VE
Sbjct: 122 VEVNGDEYNVE 132

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  152 bits (385), Expect = 4e-37
 Identities = 75/131 (57%), Positives = 92/131 (70%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    +D+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQ 121

Query: 448 VEATGEDFSVE 480
           VE  G +++VE
Sbjct: 122 VEVNGGEYNVE 132

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  151 bits (382), Expect = 8e-37
 Identities = 76/134 (56%), Positives = 92/134 (68%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M FVK  K + Y               TDY AR RL  QDKNKYNTPKYR +VR +NKDV
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
           T Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TGLLLARR+L+   LD  Y 
Sbjct: 61  TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGLLLARRLLQRLGLDTLYT 120

Query: 442 GNVEATGEDFSVEP 483
           G  + TG++++VEP
Sbjct: 121 GTTDVTGDEYNVEP 134

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score =  149 bits (377), Expect = 3e-36
 Identities = 75/134 (55%), Positives = 91/134 (67%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M FVK  K + Y               TDY AR RL  QDKNKYNTPK+R +VR +N+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
           T QI Y  I GD ++ AAYSHELPRYG++VGLTNYAAAYCTGLL+ARR+L+   LD  Y 
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120

Query: 442 GNVEATGEDFSVEP 483
           G  + TGE++ VEP
Sbjct: 121 GCTDVTGEEYLVEP 134

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score =  141 bits (355), Expect = 1e-33
 Identities = 72/126 (57%), Positives = 85/126 (67%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           F K+ K+ AYS              TDY  R RL  Q K KYNTPKYR VVRFTNKD+  
Sbjct: 2   FQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI+ +TI GD+V+AAAYSHELPRYG+  GLTN+AAAY TGLL+ARR L+   LD+ Y+G 
Sbjct: 62  QIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGV 121

Query: 448 VEATGE 465
            E  GE
Sbjct: 122 EEVEGE 127

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>RL5_PIG (Q95276) 60S ribosomal protein L5 (Fragment)|
          Length = 124

 Score =  140 bits (352), Expect = 2e-33
 Identities = 70/122 (57%), Positives = 84/122 (68%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 267
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 268 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 447
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    + + Y G 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYGGQ 121

Query: 448 VE 453
           VE
Sbjct: 122 VE 123

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  134 bits (336), Expect = 2e-31
 Identities = 73/128 (57%), Positives = 82/128 (64%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M F K  K  AY               TDY AR RL  Q KNKYN PKYR VVRFTN+D+
Sbjct: 1   MAFHKLVKNSAYYSRFQTKYKRRREGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNRDI 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
             QIV + I GD V A+AYSHEL  YG+E GLTN+AAAY TGLLLARRVLK   LD+ ++
Sbjct: 61  ILQIVSSEITGDKVFASAYSHELKAYGIEHGLTNWAAAYATGLLLARRVLKKLGLDETFK 120

Query: 442 GNVEATGE 465
           G  EA GE
Sbjct: 121 GVEEADGE 128

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  119 bits (298), Expect = 4e-27
 Identities = 65/128 (50%), Positives = 78/128 (60%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M F+K  K+  Y               TDY AR RL  Q KNKYN PKYR VVRF+N+ V
Sbjct: 1   MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFV 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
           T QIV + + GD V+A A+S ELPRYG++ GL N+ AAY TGLL+ARR L    L  +YE
Sbjct: 61  TCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYE 120

Query: 442 GNVEATGE 465
           G  E  GE
Sbjct: 121 GVTEPEGE 128

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  119 bits (298), Expect = 4e-27
 Identities = 65/128 (50%), Positives = 78/128 (60%)
 Frame = +1

Query: 82  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 261
           M F+K  K+  Y               TDY AR RL  Q KNKYN PKYR VVRF+N+ V
Sbjct: 1   MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFV 60

Query: 262 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 441
           T QIV + + GD V+A A+S ELPRYG++ GL N+ AAY TGLL+ARR L    L  +YE
Sbjct: 61  TCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYE 120

Query: 442 GNVEATGE 465
           G  E  GE
Sbjct: 121 GVTEPEGE 128

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 35/84 (41%), Positives = 46/84 (54%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           TDYRAR ++         T K R VVR T   V AQI+   + GD  + +A+S +L + G
Sbjct: 19  TDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMG 71

Query: 343 LEVGLTNYAAAYCTGLLLARRVLK 414
              G +N AAAY TG L  +R LK
Sbjct: 72  WLGGTSNTAAAYLTGYLCGKRALK 95

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>RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18) (HHal18)|
           (HL13)
          Length = 182

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 35/83 (42%), Positives = 43/83 (51%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           TDY  RLRL    K        R V R +NK VTAQ+V     GD  +A+A+S +L  YG
Sbjct: 18  TDYHQRLRLLKSGKP-------RLVARKSNKHVTAQLVTTGPDGDETVASAHSSDLDAYG 70

Query: 343 LEVGLTNYAAAYCTGLLLARRVL 411
                 N  AAY TGLL  +R +
Sbjct: 71  WAAPTGNLPAAYLTGLLAGQRAV 93

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
 Frame = +1

Query: 166 DYRARLRLTNQDKNKY---------NTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAY 318
           +YR + R   + K  Y         NT   R VVR TNK + AQI      GD+++ AA+
Sbjct: 6   NYRVKYRRRREGKTNYYKRYTYVINNTT--RLVVRLTNKYIIAQIAKFNPKGDVIVVAAH 63

Query: 319 SHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLK 414
           S EL  ++G +  L N  AAY TG LL  R LK
Sbjct: 64  SMELAKKFGWKGDLNNTPAAYLTGYLLGVRALK 96

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>RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)|
          Length = 186

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 34/81 (41%), Positives = 41/81 (50%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           TDY  RLRL    K        R V R +NK V AQ+V     GD  +A+A+S +L  YG
Sbjct: 18  TDYHQRLRLLKSGKP-------RLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYG 70

Query: 343 LEVGLTNYAAAYCTGLLLARR 405
            E    N  +AY TGLL   R
Sbjct: 71  WEAPTGNMPSAYLTGLLAGLR 91

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>RL18_ARCFU (O28373) 50S ribosomal protein L18P|
          Length = 189

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 34/84 (40%), Positives = 45/84 (53%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           T+YR RL+L    K        R VVR TN+ V AQIV     GD V+    S  L  +G
Sbjct: 21  TNYRKRLKLLLSRKP-------RLVVRITNRRVIAQIVEYAPEGDRVVVGVDSAMLREFG 73

Query: 343 LEVGLTNYAAAYCTGLLLARRVLK 414
            +  L N  AAY TG+L+A++ L+
Sbjct: 74  WKGDLNNTPAAYLTGILIAKKALQ 97

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>RL18_METAC (Q8TRS8) 50S ribosomal protein L18P|
          Length = 174

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = +1

Query: 163 TDYRARLRL--TNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPR 336
           T+Y  RL+L  + QD         R VVR ++++V  Q++  T  GDI  ++A S+EL +
Sbjct: 19  TNYHLRLKLLLSRQD---------RVVVRKSSRNVQIQLIAPTPDGDITYSSAVSNELAK 69

Query: 337 YGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNV 450
           YG      N  AAY TGLL        + L + YEG +
Sbjct: 70  YGYTGATGNTTAAYLTGLLFG-----LKSLQKGYEGGI 102

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 32/84 (38%), Positives = 45/84 (53%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           TD+R RL L    K        R V R +  +VTAQ++     GD+V+ +A+S EL + G
Sbjct: 19  TDFRQRLGLLLSGKP-------RLVARKSLNNVTAQLMAYDEKGDVVLVSAHSKELVKMG 71

Query: 343 LEVGLTNYAAAYCTGLLLARRVLK 414
            +    N  AAY TGLLL  + +K
Sbjct: 72  YKGHCGNLPAAYLTGLLLGAKAVK 95

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>RL18_SULSO (Q9UX88) 50S ribosomal protein L18P|
          Length = 199

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
 Frame = +1

Query: 166 DYRARLRLTNQDKNKYN-------TPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSH 324
           +Y+ + R   + K  Y        + + RF+VR TNK V  QI      GDI++A+A+S 
Sbjct: 9   NYKVKPRRRREGKTNYYKRYVYVISKQTRFIVRITNKYVIVQIAKIDPKGDIMIASAHSA 68

Query: 325 EL-PRYGLEVGLTNYAAAYCTGLLLARRVLK 414
           EL  ++G +    N  AAY TG L   R +K
Sbjct: 69  ELAKKFGWKGDENNTPAAYLTGYLAGLRAIK 99

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
 Frame = +1

Query: 172 RARLRLTNQDKNK--YNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYGL 345
           R R  LTN  K +    + K R VVR TNK + AQIV A   GD+ +  A +  L ++G 
Sbjct: 13  RRREGLTNYRKRRKLLLSKKPRLVVRKTNKHIIAQIVVAKPQGDVTIVGADTRILAKFGW 72

Query: 346 EVGLTNYAAAYCTGLLL-----ARRV 408
                N AAAY  GL++     ARRV
Sbjct: 73  RGDENNVAAAYLLGLVVGYKARARRV 98

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>RL18_THEVO (Q97BV7) 50S ribosomal protein L18P|
          Length = 160

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 27/75 (36%), Positives = 36/75 (48%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           TDY  RLRL             RF+VR TNK + AQI   ++ GD ++A      L +YG
Sbjct: 11  TDYGRRLRLLKSKDR-------RFIVRITNKGIIAQIAEYSVNGDRILATITDKALSKYG 63

Query: 343 LEVGLTNYAAAYCTG 387
           +E+   N    Y  G
Sbjct: 64  IELRGNNLQICYLVG 78

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 30/84 (35%), Positives = 45/84 (53%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           TD+R RL L    K        R V R +  ++ AQ++     GDIV+ +A+S EL + G
Sbjct: 21  TDFRQRLGLLLSGKP-------RLVARKSLNNIIAQLMAYDEKGDIVLVSAHSRELVKMG 73

Query: 343 LEVGLTNYAAAYCTGLLLARRVLK 414
            +    N  AAY TGLLL ++ ++
Sbjct: 74  YKGHCGNLPAAYLTGLLLGKKAVE 97

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
 Frame = +1

Query: 166 DYRARLRLTNQDKNKYNTP-------KYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSH 324
           +YR + R   + K  Y T          RFV R TNK V   +      GDI++A A+S 
Sbjct: 6   NYRIKFRRRREGKTDYYTRYTYVINNAIRFVPRLTNKYVIVSVSKFDQKGDIMIAYAHSI 65

Query: 325 EL-PRYGLEVGLTNYAAAYCTGLLLARRVLK 414
           EL  +YG +    N  AAY TG L   R +K
Sbjct: 66  ELVKKYGWKGDTNNTPAAYLTGYLAGLRAVK 96

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 31/83 (37%), Positives = 40/83 (48%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           TDYR RL+L    K        R V R T     AQIV     GD  + +A+S EL + G
Sbjct: 19  TDYRKRLKLLLSRKP-------RLVARRTLNHCIAQIVLYDEKGDKTVVSAHSRELIKLG 71

Query: 343 LEVGLTNYAAAYCTGLLLARRVL 411
            +    N  +AY TG LL ++ L
Sbjct: 72  YKGHTGNLPSAYLTGYLLGKKAL 94

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 22/47 (46%), Positives = 24/47 (51%)
 Frame = +1

Query: 88  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKY 228
           FVK  K +AY               TDY AR RL  QDKNKYNTP +
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPAH 48

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>RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P|
          Length = 195

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/84 (34%), Positives = 40/84 (47%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           T YR RL+L    K        R VVR  N ++ AQ+V     GD V+   +S+ L +YG
Sbjct: 19  TVYRKRLKLLLSGKP-------RLVVRRFNSNILAQLVEYDPKGDRVIFTIHSNVLKKYG 71

Query: 343 LEVGLTNYAAAYCTGLLLARRVLK 414
            +    N  +AY  GL+     LK
Sbjct: 72  WKGHRGNLPSAYLVGLIAGYEALK 95

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>RL18_THEAC (Q9HIS6) 50S ribosomal protein L18P|
          Length = 163

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 342
           TDY  RL+L    +        RF+VR T K V AQ+   +  GD ++       L +YG
Sbjct: 14  TDYSKRLKLLKSREK-------RFIVRITGKGVIAQVAEYSDIGDRILFTVTDKTLAKYG 66

Query: 343 LEVGLTNYAAAYCTGLL 393
           +++   N    Y  G +
Sbjct: 67  VDLRGNNIQVCYLVGYI 83

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 35.8 bits (81), Expect = 0.063
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPR-Y 339
           T+YR RL+L    K        R VVR +     AQI+     GD  + +A++ EL R +
Sbjct: 19  TNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDF 71

Query: 340 GLEVGLTNYAAAYCTGLLLARRVLK 414
           G +    N  +AY  GLL+  +  K
Sbjct: 72  GWKGHCGNTPSAYLLGLLIGYKAKK 96

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 35.8 bits (81), Expect = 0.063
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPR-Y 339
           T+YR RL+L    K        R VVR +     AQI+     GD  + +A++ EL R +
Sbjct: 19  TNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDF 71

Query: 340 GLEVGLTNYAAAYCTGLLLARRVLK 414
           G +    N  +AY  GLL+  +  K
Sbjct: 72  GWKGHCGNTPSAYLLGLLIGYKAKK 96

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 35.8 bits (81), Expect = 0.063
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
 Frame = +1

Query: 169 YRARLRLTNQDKNKYNTPKY-------RFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHE 327
           YR   R   + K  Y   +        R V R T     AQIV     GD+ +A+A+S E
Sbjct: 10  YRVPFRRRREGKTNYYKRRELIKADAPRLVARKTLNHNIAQIVDFAPHGDVTLASAHSIE 69

Query: 328 L-PRYGLEVGLTNYAAAYCTGLLLARRVLK 414
           L  ++G +    N  AAY TG L   R L+
Sbjct: 70  LRNKFGWKGHCGNTPAAYLTGYLCGLRALE 99

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +1

Query: 163 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPR-Y 339
           T+YR RL+L    K        R VVR +     AQI+     GD  + +A++ EL R +
Sbjct: 19  TNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDF 71

Query: 340 GLEVGLTNYAAAYCTGLLL 396
           G +    N  +AY  GLL+
Sbjct: 72  GWKGHCGNTPSAYLLGLLI 90

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
 Frame = +1

Query: 169 YRARLRLTNQDKNKYN-------TPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHE 327
           YR   R   + K  Y+       + K R VVR T     AQIV     GD  + +A++ E
Sbjct: 7   YRVPFRRRREGKTNYHKRLKLLKSKKPRLVVRKTLNHHIAQIVVYDPKGDKTLVSAHTME 66

Query: 328 LPR-YGLEVGLTNYAAAYCTGLLL 396
           L R +G +    N  +AY  GLL+
Sbjct: 67  LMRDFGWKGHGGNTPSAYLLGLLI 90

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>LIPA_HALSA (Q9HN78) Probable lipoyl synthase (EC 2.8.1.-) (Lipoic acid|
           synthase) (Lipoate synthase) (Lipoyl-acyl-carrier
           protein synthase) (Sulfur insertion protein lipA)
           (Lip-syn)
          Length = 311

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -3

Query: 450 NIALIFLIQITALEHTAGQKQTSAVRCGIVGEADLKTITRKLMGIGSSHHDVTSN-GGVH 274
           NI  +   Q+   +  AG +Q+ +V   +  E+D+ T T  ++G+G   H+V    G + 
Sbjct: 165 NIETVARRQVPVRDRRAGYEQSLSVLEYVTRESDIYTKTSIMLGVGEYDHEVYQTLGDLR 224

Query: 273 NLGSDI 256
             G D+
Sbjct: 225 EAGVDV 230

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>RIC8_DROPS (Q29IC2) Synembryn (Protein Ric-8)|
          Length = 566

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +3

Query: 117 LQAVPSEVQEKETGEDRLQGQAQAHQPRQEQVQHTKVPVCCAIYQQRCHCPNCVRHHC 290
           L A P E++++E G+ +LQ Q    Q   + +      +C  +YQ       C+R HC
Sbjct: 105 LPATPDELKQQEEGQLQLQEQPSLAQ--SDIIAEALKCLCNLVYQSADCRRQCLRQHC 160

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>VA31_VACCV (P24760) Protein A31|
          Length = 124

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 366 IVGEADLKTITRKLMGIGSSHHDVTSNGGVHNLGSDI 256
           ++G+  +  +   L  +  S+H VTS+G ++ LGS I
Sbjct: 63  VLGKVTINNLKMMLFYMDLSYHGVTSSGAIYKLGSSI 99

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>SECA_BACSU (P28366) Preprotein translocase secA subunit|
          Length = 841

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +3

Query: 93  EEPEDQGLLQAVPSEVQEKETGEDRLQGQAQAHQPRQ--EQVQHTKVPVCCAIYQQR--- 257
           E  ED+     + +E++     E+ +QGQ  AHQP++  +  +  K PV   +   R   
Sbjct: 765 ESIEDEVAKFVMKAEIENNLEREEVVQGQTTAHQPQEGDDNKKAKKAPVRKVVDIGRNAP 824

Query: 258 CHC 266
           CHC
Sbjct: 825 CHC 827

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>RIC8_DROME (Q9W358) Synembryn (Protein Ric-8)|
          Length = 573

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +3

Query: 117 LQAVPSEVQEKETGEDRLQGQAQAHQPRQEQVQHTKVPVCCAIYQQRCHCPNCVRHHC 290
           L A P E+++    E+R + Q +  Q + E +      +C  +YQ       C+R HC
Sbjct: 105 LPATPDELKQ----EEREEPQLEPSQAQSEVIAEALKCLCNLVYQSSDCRRQCLRQHC 158

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>LRMP_MOUSE (Q60664) Lymphoid-restricted membrane protein (Jaw1 protein)|
          Length = 539

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 341 VLRSASPTMPQRTALVCFWP--AVCSSAVIWIRNMRAMLRPLGRTFLLSRL 487
           V R+  P++ +R +    W    +CSS   W+ +++A  R   R   L+ L
Sbjct: 436 VERTRKPSLSERRSSTLAWDRGTICSSVASWVTHLQASFRRANRALWLTGL 486

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>ZDHC7_RAT (Q923G5) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 7) (DHHC-7) (Sertoli cell gene
           with a zinc finger domain protein)
          Length = 308

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = +3

Query: 222 KVPVCCAIYQQRCH----CPNCVR---HHC 290
           K P CC I  +R H    C  C+R   HHC
Sbjct: 131 KCPKCCCIKPERAHHCSICKRCIRKMDHHC 160

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>ZDHC7_MOUSE (Q91WU6) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 7) (DHHC-7) (GABA-A
           receptor-associated membrane protein 2)
          Length = 308

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = +3

Query: 222 KVPVCCAIYQQRCH----CPNCVR---HHC 290
           K P CC I  +R H    C  C+R   HHC
Sbjct: 131 KCPKCCCIKPERAHHCSICKRCIRKMDHHC 160

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>ZDHC7_HUMAN (Q9NXF8) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 7) (DHHC-7) (Zinc finger
           protein 370)
          Length = 308

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = +3

Query: 222 KVPVCCAIYQQRCH----CPNCVR---HHC 290
           K P CC I  +R H    C  C+R   HHC
Sbjct: 131 KCPKCCCIKPERAHHCSICKRCIRKMDHHC 160

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>YCBB_ECOLI (P22525) Hypothetical protein ycbB|
          Length = 615

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 14/83 (16%)
 Frame = +2

Query: 272 LCTPPLLVTS*WLLPIPMSFLVMVLRSASPTMPQRT-------ALVCF---WPAVCSSAV 421
           L TPPL V + W L +    L   +   +P  PQ         AL+C    WP +   A 
Sbjct: 183 LATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLCDTKPWPQLTGKAT 242

Query: 422 I----WIRNMRAMLRPLGRTFLL 478
           +    W  ++ A+   L RT +L
Sbjct: 243 LRPGQWSNDVPALREILQRTGML 265

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>RL18_THEMA (Q9ZAE3) 50S ribosomal protein L18|
          Length = 122

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +1

Query: 202 KNKYNTPKY-RFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAY 378
           K  + TP+  R  V  +NK + AQI+  TI   +V A+    EL R  L+    N  AA 
Sbjct: 20  KKVFGTPERPRLCVFRSNKHIYAQIIDDTIGHTLVSASTLDPEL-REKLQ-KTWNVEAAK 77

Query: 379 CTGLLLARRVLK 414
             GLL+ +R L+
Sbjct: 78  EVGLLIGKRALE 89

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>ZDHC3_MOUSE (Q8R173) Palmitoyltransferase ZDHHC3 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 3) (DHHC-3) (Golgi-specific
           DHHC zinc finger protein) (GABA-A receptor-associated
           membrane protein 1)
          Length = 299

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = +3

Query: 222 KVPVCCAIYQQRCH----CPNCVR---HHC 290
           K P CC+I   R H    C  C+R   HHC
Sbjct: 128 KCPKCCSIKPDRAHHCSVCKRCIRKMDHHC 157

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>ZDHC3_HUMAN (Q9NYG2) Palmitoyltransferase ZDHHC3 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 3) (DHHC-3) (Zinc finger
           protein 373) (DHHC1 protein)
          Length = 327

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = +3

Query: 222 KVPVCCAIYQQRCH----CPNCVR---HHC 290
           K P CC+I   R H    C  C+R   HHC
Sbjct: 128 KCPKCCSIKPDRAHHCSVCKRCIRKMDHHC 157

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>RL18_BACST (P09415) 50S ribosomal protein L18 (BL22)|
          Length = 120

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 23/66 (34%), Positives = 34/66 (51%)
 Frame = +1

Query: 217 TPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLL 396
           T + R  V  +NK + AQI+  T +  IV A+    E   +GL+    N  AA   G L+
Sbjct: 26  TERPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDKE---FGLD-STNNIEAAKKVGELV 81

Query: 397 ARRVLK 414
           A+R L+
Sbjct: 82  AKRALE 87

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>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21|
          Length = 2189

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
 Frame = +3

Query: 93   EEPEDQGLLQA-VPSEVQEKE-----TGEDRLQGQAQAHQPRQEQVQHTKV 227
            ++P+ QG +Q  V S+ Q+++       + + Q Q Q  QP+Q+Q QH +V
Sbjct: 1339 QQPQQQGQVQQQVVSQQQQQQHQPQQQQQPQQQQQLQQQQPQQQQPQHQQV 1389


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.132    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,576,774
Number of Sequences: 219361
Number of extensions: 1204477
Number of successful extensions: 3998
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3976
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result