Clone Name | bart23f02 |
---|---|
Clone Library Name | barley_pub |
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 44.7 bits (104), Expect = 6e-05 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = +2 Query: 131 CHPDDLSALRGFAGNLSGGAVLLRAAWSGTVCCGWDGVGCDA-ASGRVTALRLPGRGLAG 307 CHP DL ALR F +L + S T CC W G+ C++ +GRV L L + L+G Sbjct: 31 CHPHDLEALRDFIAHLEPKPDGWINSSSSTDCCNWTGITCNSNNTGRVIRLELGNKKLSG 90 Query: 308 AI 313 + Sbjct: 91 KL 92
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = +2 Query: 131 CHPDDLSALRGFAGNLSGGAVLLRAAWS-GTVCCG-WDGVGCDAASGRVTALRLPG 292 C P D +AL F +LS + + WS T CC W G+ CD SGRVT + L G Sbjct: 27 CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRG 82
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 40.4 bits (93), Expect = 0.001 Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +2 Query: 116 ARAASCHPDDLSALRGFAGNLSGGAVLLRAAWSGTVCCGWDGVGCDAASGRVTALRLPG- 292 ARA C P D AL +L A L + + CC WD V CD A GRV + + G Sbjct: 22 ARAVRCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEA-GRVNNVFIDGA 80 Query: 293 RGLAGAIP 316 + G IP Sbjct: 81 NDVRGQIP 88
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 37.7 bits (86), Expect = 0.007 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +2 Query: 131 CHPDDLSALRGFAGNLSGGAVLLRAAW-SGTVCCGWDGVGCDAASGRVTALRLPGRGLAG 307 C+PDD L VL A+W S T CC W V CD+ + R+ +L + ++G Sbjct: 27 CNPDDKKVLLQIKKAFGDPYVL--ASWKSDTDCCDWYCVTCDSTTNRINSLTIFAGQVSG 84 Query: 308 AIP 316 IP Sbjct: 85 QIP 87
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 35.0 bits (79), Expect = 0.047 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 13/75 (17%) Frame = +2 Query: 128 SCHPDDLSALRGFAGNLSG---GAVLLRAAWSGTVCCGWDGVGCDAA----------SGR 268 +C+ +DL AL GF L G ++ + CC W G+ C ++ SGR Sbjct: 28 TCNSNDLKALEGFMRGLESSIDGWKWNESSSFSSNCCDWVGISCKSSVSLGLDDVNESGR 87 Query: 269 VTALRLPGRGLAGAI 313 V L L R L+G + Sbjct: 88 VVELELGRRKLSGKL 102
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 32.3 bits (72), Expect = 0.31 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +2 Query: 206 AWSGTVCC--GWDGVGCDAASGR--VTALRLPGRGLAGAIP 316 +WSG C W GV CD ++G +T L L L G IP Sbjct: 382 SWSGDPCMLFPWKGVACDGSNGSSVITKLDLSSSNLKGTIP 422
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +2 Query: 212 SGTVCCGWDGVGCDAASGRVTALRLPGRGLAGAI 313 SG C W GV C + GR+ L L GL G + Sbjct: 61 SGRGSCSWRGVSC-SDDGRIVGLDLRNSGLTGTL 93 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,737,427 Number of Sequences: 219361 Number of extensions: 307226 Number of successful extensions: 1170 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1168 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)